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●I-TASSER ●QUARK ●LOMETS ●COACH ●COFACTOR ●MetaGO ●MUSTER ●CEthreader ●SEGMER ●FG-MD ●ModRefiner ●REMO ●DEMO ●SPRING ●COTH ●BSpred ●ANGLOR ●BSP-SLIM ●SAXSTER ●ThreaDom ●ThreaDomEx ●EvoDesign ●GPCR-I-TASSER ●BindProf ●BindProfX ●SSIPe ●ResQ ●IonCom ●STRUM ●DAMpred

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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13

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Modeling of Pfam protein domain faimilies by C-I-TASSER (Page 49)

Search by Pfam ID:

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# Pfam ID C-I-TASSER models ranked
by estimated TM-score
(click to view)		 Full name and representative sequence
4801 PF16128
(DUF4840)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Domain of unknown function (DUF4840) (Length=144)
KMAGSYPNLVLLFDHKNDANVKNQVDSVETECYFSMRNDSTFTISNFPIKKLAEHISNPELKEAISKVGDKTVAGKYMVL
PNSQTNQAYFYAYPSPITLNLTYGSDSKEHKVVLVFTPDTYYVGGCIWSTKQIGFPFYLTSIFV
4802 PF16081
(Phage_holin_7_1)
 click to view
Estimated TM-score=0.50;
hard target.		 >Mycobacterial 2 TMS Phage Holin (M2 Hol) Family (Length=133)
QIRKWYYLIGALVTALVPILVTSGVVSDTQGNAWINAVVAIGGVLGAAGLGTAGVVLGKQIKGAPGAAADKAVTSLQDIQ
AQLNSTAQAAQDQLAAATQVAVDSITKIQATVGNVVGPQVSLGPLAAEVIKSV
4803 PF15968
(RexB)
 click to view
Estimated TM-score=0.50;
hard target.		 >Membrane-anchored ion channel, Abi component (Length=139)
MPGVYIVIIPYVIVSICYLLFRHYIPGVSFSAHRDGLGATLSSYAGTMIAILIAALTFLIGSRTRRLAKIREYGYMTSVV
IVYALSFVELGALFFCGLLLLSSISGYMIPTIAIGIASASFIHICILVFQLYNLTREQE
4804 PF15966
(F-box_4)
 click to view
Estimated TM-score=0.50;
easy target.		 >F-box (Length=118)
SDRFSGLPIEILWHIARFLDSFSLCQLSLVSRTMRQVCASLLPSRGIVELQWERGHFPGHPHTVRWRVKSKVWKFSPAFS
PVYSWHFVDVPSMSDHMKKCPYFNRAELKTEPVPLTAM
4805 PF15870
(EloA-BP1)
 click to view
Estimated TM-score=0.50;
hard target.		 >ElonginA binding-protein 1 (Length=160)
RPVIPTEFGAKVPTNIRQRYLNLFIDECLKFCSSSQEAFDKALSEEKVAYERSTSRNIYLNVAVNTLKKLRSLVPNSPPC
VNKTSNRKVVSHEAVLGGKLAAKTSFTLNQSGNLRAEDLTGAALYRRLKEYLLTEEQMKENGYPMPHPEKAGRAVVFTVE
4806 PF15861
(partial_CstF)
 click to view
Estimated TM-score=0.50;
hard target.		 >Partial cleavage stimulation factor domain (Length=60)
LNEIYSNIELPDDALVNEVIKNTDILNNILKSRVEDMKNWNNEQKIQVLAIQKALLLKGY
4807 PF15779
(LRRC37)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Leucine-rich repeat-containing protein 37 family (Length=69)
KLSPTNNMIPHHPSKPLKNMVTHIPAHKMTVPRQIQEDQGEYTISSNGSFQPLDLEVTLTSGIIPEVKH
4808 PF15737
(DUF4685)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Domain of unknown function (DUF4685) (Length=123)
RTFGPKPEPVLSPRHEEAKHLLQRARMKARTRPLRASHDIVPTIAQGSRDAGRSPALDPRMTLACRDNLQNGNTSDSSSG
ESSSGQWPKRGPSPSHVRFEDESARDAESRYLERLQQRQRQVL
4809 PF15679
(DUF4665)
 click to view
Estimated TM-score=0.50;
hard target.		 >Domain of unknown function (DUF4665) (Length=100)
MAKNKLRGQKSRNVFHIASQKNFKAKSKAKPVTTNLKKINIVNEEKINRMNKAFVNIQKELAHFSKGLSLEPLQKELIPQ
QHPENEPVNVDEATRLMAQL
4810 PF15662
(SPATA3)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Spermatogenesis-associated protein 3 family (Length=191)
MKKVKKKRSEARRHQDSTSPHASSNSTSQQPSPESTPQQPSPESTPQQPSPESTPQQSSLETTSRQPASQALPAPEIRRS
SRCLLSPDANVKAAPQSRKAGPLTRAGPHSCSCATCPCSSACWRRLGLCHSRIFDVLLPRDWQMAPGRGLPNLLTFYRKP
SRKPSSHRNVCPPSPRNCGCGSGGSRSCLLH
4811 PF15646
(Tox-REase-2)
 click to view
Estimated TM-score=0.50;
hard target.		 >Restriction endonuclease fold toxin 2 (Length=134)
PDNAYQLRIAGYPEREVPLAGQRRGLMVDGIRPADGHLVEAKHVRDPDCTKKSFRSLDRVNETLVKPVKINSQGKIAWDP
MVDSMYRGDQRELNRYKQAMDNPANNEIRGLEIVTNGKDQAAYWQSMMAMTGTP
4812 PF15583
(Imm68)
 click to view
Estimated TM-score=0.50;
hard target.		 >Immunity protein 68 (Length=156)
YIEKYWANYIGGTDDSLTLIDYLYDKGKTEISLNEIFNDTGLSRLNWNFHTSPNLEYIDSEGLCYEFYYAIDLVTDLAAL
ILESKKSGGFNIKNLYHGEERDRFIKITTTQEEEQAMNRALADFCVSPFAYDLHEMVDDEDMLEMAKDCENIRKEL
4813 PF15573
(Imm47)
 click to view
Estimated TM-score=0.50;
easy target.		 >Immunity protein 47 (Length=258)
ISNNIWFGQPSSSSPSTIKENLLRATTEHEALFHLIELFKLGDFTQKRLLFQLMNYTNDEALLNLCIRVFCSISTHEDLR
DSNHLLFLGEGNKAAVDTFASEAITTLSLEVIPYLMALLEEWDSIRDTSVMIRDSIDCFINFKEHLGDNATVDEIGEYYK
DFMEDCDAGQYYYHQNLSFLGDLTKILMQRVFIAANHEQMLRMELIPSLLSTWSGEKVPGDYHTIITSENYKDYVSYVKG
LANRKWEKGQKYFYGHLL
4814 PF15561
(Imm15)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Immunity protein 15 (Length=170)
IIRETGLYNLDYFIEEHEGGYEEMPILDYFPQAKFLKRVIKKEEISALLLDIALFFVNVILLYAYNKLTEKQFANFFIAI
FVVDFDHLEEDYGDYGHFNPRILVSREADKYTFVSQEMLFDYKRCEKFYKHVSKVAGLGDFMFYRHYDDKNDLDTIYMVP
NREGYSPVSL
4815 PF15534
(Ntox35)
 click to view
Estimated TM-score=0.50;
hard target.		 >Bacterial toxin 35 (Length=76)
LDANSRKHILDPKHDWHKVTKNNWDDVAKVMSHVMRYGKEDPYKSARKKTLMMNGHTITVTFVRENGKIKISNGWV
4816 PF15496
(DUF4646)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Domain of unknown function (DUF4646) (Length=126)
PQQFLRAPRTDLPYGPFEPAALTSLDNNLDKGFPLLAPPVPTVPHPFAMHDVAEDDWQRFLHDVKIASSLSTMDKIKAGV
APMAIGVAPLTGFLVSKGIEKRMRTKKSNAIGELIEHWNAHFFHPR
4817 PF15423
(FLYWCH_N)
 click to view
Estimated TM-score=0.50;
very hard target.		 >FLYWCH-type zinc finger-containing protein (Length=107)
MPLPEPSEQEGESVKAGQEPSPKPGTDVIPAAPRKPREFSKLVLLTASNQDEDGVGSKPQEVHCVLSLEMAGPATLASTL
QILPVEEQGGVVQPALEMPEQKCSKLD
4818 PF15420
(Abhydrolase_9_N)
 click to view
Estimated TM-score=0.50;
hard target.		 >Alpha/beta-hydrolase family N-terminus (Length=208)
LTPSLLPRGPLFQGLVSGGAGAIGYGIGVFCVWLVRYMRSKDTSPPAPRWAWSVLLVVGVIGLALMIVWFHHWQDDVRDL
MGVPRLGFWDHPLAAVLSLVTLFVLVEIGQLVGRLARFLTRQLDRVAPPRVAAVVTVALLLALTIALLNGVVVRFAMSTI
NKTFAAVNDETDPDNPAPESELRSGGPESLVSWESLGHQGRIFISGGP
4819 PF15393
(DUF4615)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Domain of unknown function (DUF4615) (Length=139)
QLWKEVDWCVEQLELGLKTQKSTPKQVEEALRAIKTLRSDKAPLVKKRQIMRTMFGDYRKKMEEEQCKQLKLMQAAAKSA
RVVEVKENIRKKNCQVLRKRSGACRKSQGSAGSPSASPRTSNTDSFRFTTSQEKFCFNF
4820 PF15387
(DUF4611)
 click to view
Estimated TM-score=0.50;
hard target.		 >Domain of unknown function (DUF4611) (Length=96)
LSGEYVGQDGQRQQLRVPCEAPGDAEPFQGLLSGVAQMRELVAELFGPLVQREAQDRVAAAPDEALDGDDEDDAEDENNI
DNRTNSDGPSAKRPKP
4821 PF15361
(RIC3)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Resistance to inhibitors of cholinesterase homologue 3 (Length=151)
LVLCVALLLPKMLLSRGRKDAAERPEGSGHFPPMMHRQAAPEGRSQRAAASGFSRAHNSEAIARAKGAGTGAGTGGKSNL
AGQIIPVYGFGILLYILYILFKITSKGNNKPSARRCPPHRSENMKRKITDFELAQLQEKLRETELVMENIV
4822 PF15357
(SEEK1)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Psoriasis susceptibility 1 candidate 1 (Length=149)
TDQKSHSQRALGTQTPALQGPQLLNTDPSSEETRPPHVNPDRLCHMEPANHFWHAGDLQAMISKEFHLAATQDDCRKGRT
QEDILVPSSHPELFASVLPMAPEEAARLQQPQPLPPPSGIHLSASRTLAPTLLYSSPPSHSPFGLSSLI
4823 PF15340
(COPR5)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Cooperator of PRMT5 family (Length=151)
AGFATADHSSQERETEKAMDRLARGAQSVPNDSPARGEGTHSEEEGFAMDEEDSDGELNTWELSEGTNCPPKEQPGDIFN
EDWDLELKADQGNPYDADDIQESISQELKPWVCCAPQGDMIYDPSWHHPPPLIPHYSKMVFETGQFDDAED
4824 PF15330
(SIT)
 click to view
Estimated TM-score=0.50;
hard target.		 >SHP2-interacting transmembrane adaptor protein, SIT (Length=107)
ILLPLILAVVLLLLMVASLVVWRMVKQQKKAAGISPEQVLQPPEGDICYANLSLQKTENSGSSQKKAPTRSSSCTQANAG
EVEYVTMTPFPREDIAYAALSLETSDQ
4825 PF15314
(PRAP)
 click to view
Estimated TM-score=0.50;
hard target.		 >Proline-rich acidic protein 1, pregnancy-specific uterine (Length=47)
PEEDKDQLYHPFEEPSNKQPDSYFQPQQFGQVQLYQEPEQDMDNLYH
4826 PF15259
(GTSE1_N)
 click to view
Estimated TM-score=0.50;
very hard target.		 >G-2 and S-phase expressed 1 (Length=143)
ILLLADEKFDFDLSLSSSSANEDDEVFLGPVGHRERCIAASLELNHQIPEEPPLPASESHFTWSPLTGEKFVEVYKEAHL
LALQIQSNSKTKAAPAAKLEDPGSQGVEGFIQESKLKINLFERENEVKKSPRALKRETYHLSD
4827 PF15215
(FDC-SP)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Follicular dendritic cell secreted peptide (Length=63)
FPVSEDQDREKRSISDSDDLSSEFLVFPYPFLPFPFRGYQRYPWLRNNFPIPISESRLTTPLP
4828 PF15213
(CDRT4)
 click to view
Estimated TM-score=0.50;
hard target.		 >CMT1A duplicated region transcript 4 protein (Length=137)
LTENIGLPLNLLEKHNPWPAYVTYASPVVKKLIEKSKARELECMQALEESRRTLRQNKPLSVIQLKRKKSSKSSGNMLFK
DTRSETMLSVWGTCSVSPMGPTVIPEPTHVHTDSRDSPTANYNKIIFARKPMMRMLP
4829 PF15198
(Dexa_ind)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Dexamethasone-induced (Length=90)
MSSSSVYADLDSVEPLLNELPHMFYVGLFFVNVLILYYAFLIEYIVLNVGIVFLPEDMDQALLELGVLSDPGSVPFDTEA
ELDVFEGYLE
4830 PF15189
(MEIOC)
 click to view
Estimated TM-score=0.50;
hard target.		 >Meiosis-specific coiled-coil domain-containing protein MEIOC (Length=166)
RSGPANELHIRLEECYEQWRALEKERKKTEAELARNFPGKRVSSSNNTPIPRLPSNPSRVDRLIVDQLREQARVLTLLGK
MERLRSSPVHANISSTLNCHLEAIHVTQARRKDEIINAANRQRQGAPRYNDDKDVLALAAAIKDLTMSTRKARTALWCAL
QMTLPK
4831 PF15174
(PRNT)
 click to view
Estimated TM-score=0.50;
hard target.		 >Prion-related protein testis-specific (Length=51)
NTTLPHTAWPLSFLHQTVSTLKAVAVTHSLWHLQIPVDCQACNRKSKKIYC
4832 PF15109
(TMEM125)
 click to view
Estimated TM-score=0.50;
hard target.		 >TMEM125 protein family (Length=111)
ILEEHVELWWFQEPKKSLICYGVAVALILACGVGGIALLYSTSSRSGEWRLAVGTTLCLLALLVLLKQLLSSAIQDMNCI
RRREQVELLKSGGSSDCAVLLLTALVLLVCG
4833 PF15060
(PPDFL)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Differentiation and proliferation regulator (Length=110)
MAAIPSSGSLVATHDYYRRRLGSTSSNSSCGSAEYPGEAIPHHPGLPKADPGHWWASFFFGKSTLPFMATVLESPERSES
PQASSGSIACDLALETMRKQPGGQPGKANT
4834 PF15056
(NRN1)
 click to view
Estimated TM-score=0.50;
hard target.		 >Neuritin protein family (Length=86)
CDSIYRGFAECLLRLGDSMTRSVQQGAEDLQEIDTICRSWDEFHTCANAALAGCPEEAAAVWESLRQESKKMQFSGNLYD
MCSNRA
4835 PF15011
(CK2S)
 click to view
Estimated TM-score=0.50;
hard target.		 >Casein Kinase 2 substrate (Length=162)
ALRQCFPAVEEQQGLWRSTLSDCQPLVASLSNLAEQLQAARNVRFDDVPPLRAFPDLEEQLRRKQLAAGDTVLDKLGERL
ATLLKVRDTVSSYVEQVFQVYEQHADAVGIDAVLQPSAVSPSLADMLEWLQDIERHYRNSYMKRKYLLSSIHWGDLANIQ
AL
4836 PF15002
(ERK-JNK_inhib)
 click to view
Estimated TM-score=0.50;
hard target.		 >ERK and JNK pathways, inhibitor (Length=203)
SDTHRPRHDSNLEIYKRLFETKRKDQLNALKNLVELNDINQQYKIIDIMLKGLFKVLEDSRQVLVAANMQPDDPFPMDDK
IKEAYSHVVENTAFFGDVALRFPRIVHHYYDRNTDWSSLLRWGLNFCNQTGVFTGGAHQHVLTLMSQELGITEKSPDFIN
PYRTERDDVLHTAEAFQKILREEEKRRRKEEKRKEIRKGPRIS
4837 PF14999
(Shadoo)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Shadow of prion protein, neuroprotective (Length=133)
CDSSTAKGGRGGARGSARGGLRSGARGTSRVRVRPAPRYSAAGSSLRVAAAGAAAGAAAGAATGLVAGAGWRRVTGPGEG
GLEDDEDGLSDRNGTSRSVYSYWTWTSGTGCLQCMPLCLLIGSTLGALELQQP
4838 PF14935
(TMEM138)
 click to view
Estimated TM-score=0.50;
hard target.		 >Transmembrane protein 138 (Length=118)
QLVLYIIQDVCLVFAVIVVFLVFFNTFIFQAGLVGLLIRKFKTTIIVTLTYFVLCVGLHVWAMSLRWEDPNRYIWNEGFQ
AMFVFQRVGAVLYYYFYKRTALRLGDPRFYQDSDWLRR
4839 PF14934
(DUF4499)
 click to view
Estimated TM-score=0.50;
hard target.		 >Domain of unknown function (DUF4499) (Length=87)
YAMWVVFWPQSIPYQSLGPLGPFTQYLVDHHHILLRNGYWLAWLIHVGESLYAMVLCKSKGITNGQAQLLWFLQTFLFGI
ASLSILI
4840 PF14917
(CCDC74_C)
 click to view
Estimated TM-score=0.50;
hard target.		 >Coiled coil protein 74, C terminal (Length=123)
PPHLRRPTTLQQCEVVIRQLWNANLLQAQELQHLKSLLEGNQRPKAAPEEAGPSSPKDQEALHPGAMQFPKVPTKGVSKK
CLILSPMPVAERAILPALKQTLKNNFAERQKRLQVVQSRRLHR
4841 PF14882
(PHINT_rpt)
 click to view
Estimated TM-score=0.50;
hard target.		 >Phage-integrase repeat unit (Length=51)
EYKQRYREDLRLPYDPSKFYSNDWQSWPTFFGTTNKFYPTLAEAQLAVQAL
4842 PF14778
(ODR4-like)
 click to view
Estimated TM-score=0.50;
hard target.		 >Olfactory receptor 4-like (Length=345)
GLLIGQSSAQRDFVVMATRTPQREESTSALDKEWVTEHARQVSRMLPGGLSVLGVFIITDADAKDTLTTLRQLVFAVENL
ISSDNLWSPADDDITDCVTLHVNPKTRKTVCRTFDVKDPKSMAKPADWKYQLGVCSSWSMVSCCLNVDMLVPLPDNRAST
ENMDKCLKEGLKVWTHQIESGVCLIDGKKLPDDTDLTSGQKRNVRQTYTAQLLITPDDQRLPDVVQRCGGSVSVRGAIHS
RAYLHSNKPKARLAEKLLKRDVVSTVATRVQMMLEELLISEEEGKGSKDKQQTEQFCLPRRIFCPVKVSGPVCVCDYQFS
DEGQSEVTDRLKEMLDMDAAEEDLD
4843 PF14768
(RPA_interact_C)
 click to view
Estimated TM-score=0.50;
hard target.		 >Replication protein A interacting C-terminal (Length=79)
ICPLCERNSLLENKGVIVCKCGLRINTEQDGITLKNVQESLEAGANEHSAVCGSKPVFSLDEKFGTSTLTMSCQDCDFL
4844 PF14767
(RPA_interact_M)
 click to view
Estimated TM-score=0.50;
hard target.		 >Replication protein A interacting middle (Length=77)
VQEVMEEEWTALQSANRGLPTPWRKDGMEEMYSVMKEYDELAVFEEIQQELMSQELSIIEEXERSMRFEEQYLNSVV
4845 PF14756
(Pdase_C33_assoc)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Peptidase_C33-associated domain (Length=147)
GSPDAVEVSGFDPACLDRLAEVMHLPSSAIPAALAEMSGDSDRSASPVTTVWTVSQFFARHSGGNHPDQVRLGKIISLCQ
VIEDCCCSQNKTNRVTPEEVAAKIDLYLRGATNLEECLARLEKARPPRVIDTFFDWDVVLPGVEAAT
4846 PF14571
(Di19_C)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Stress-induced protein Di19, C-terminal (Length=99)
LKKELREANLQSLLGGSSRFTSPTNIDSDPLLSSFIFSSPSANEPPKKSATSVAEGTLAIKLSLKESLKREIQEAPLSGE
DQQKAKKSEFVRGLLLSTI
4847 PF14445
(Prok-RING_2)
 click to view
Estimated TM-score=0.50;
easy target.		 >Prokaryotic RING finger family 2 (Length=56)
DPHSFAQFTCDLCNTAHPIAELRQCVLCGRWACNACWKDEYYTCRSCAGLIKIHQL
4848 PF14404
(Strep_pep)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Ribosomally synthesized peptide in Streptomyces species (Length=63)
MRPFALNYAFPAESSPVVGPFTYDSTLQLNVLPDGRPAIADRALLLAAGSTTSTAGSKTHFDD
4849 PF14197
(Cep57_CLD_2)
 click to view
Estimated TM-score=0.50;
easy target.		 >Centrosome localisation domain of PPC89 (Length=64)
LAANAEELQQRLDTATQQRAELEAQLARLAADRDEARQQLAANAEELQQRLDTATQQRAELEAQ
4850 PF14160
(FAM110_C)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Centrosome-associated C terminus (Length=108)
RGLQRSQSDLSSRYSASLTEFDTFFQYCGLEPEVVEALGRENFSAGSDRVALKVRSVSVATSDSGFSRHSGGDEGLQEEE
LTEQVPSTTSVVERNARIIKWLYTCKKA
4851 PF14159
(CAAD)
 click to view
Estimated TM-score=0.50;
hard target.		 >CAAD domains of cyanobacterial aminoacyl-tRNA synthetase (Length=85)
DYVGTFFNRYKQPLITLGLIVAAIVTVRVVLAILDALNDIPLVAPTFELIGIGYSAWFVYRYLLKASNRQELTSEIAALK
SQVVG
4852 PF14135
(DUF4302)
 click to view
Estimated TM-score=0.50;
hard target.		 >Domain of unknown function (DUF4302) (Length=233)
EEDLFDDSSANRIEATLKADKEVLTSAKNGWLMEYYPSANLTYGGYNILVSFAEDGTVQVASDIYDAEAKVTSTYVLKQS
AGPVLSFDTHNEIMHYFSDPHNPGGIGSDGKGMEGDFEFTIMEATKDRVILKGKKNLTKIIMTPLAETTIWKDFLQGVQD
ADEVFSQFIAYKYAEGDFKADVTVSYRTLAITYTEGDNDITVEAPYIITTEGNIKFREPLVLNGKSIEELKYQ
4853 PF14089
(KbaA)
 click to view
Estimated TM-score=0.50;
hard target.		 >KinB-signalling pathway activation in sporulation (Length=179)
GGITTAIIGIILNWSEYEKLFLRSDVLEIIAVLVWHIGVGFIFSVISQMGFFAYLTIHRFGLGIFRSDSLWNSVQVVLIL
FVLFDLVYFRYQVFAVEGESIVSYILVALFILIVGLIVAYIKSAQTNKGAFVPALFFMVVVTVIEWFPALRINNEDWLYL
MLFPLLVCNAYQLLILHKL
4854 PF14086
(DUF4266)
 click to view
Estimated TM-score=0.50;
hard target.		 >Domain of unknown function (DUF4266) (Length=50)
VKPWERDLLAKPQMALDSDPLQTAFDEHIYFSKEASSGGRGFGGGGCGCN
4855 PF14077
(WD40_alt)
 click to view
Estimated TM-score=0.50;
easy target.		 >Alternative WD40 repeat motif (Length=48)
MCGTMEKNVLGGQEQLRVRVTELEDEVRNLRKINRDLFDFSTRIITRP
4856 PF14072
(DndB)
 click to view
Estimated TM-score=0.50;
hard target.		 >DNA-sulfur modification-associated (Length=336)
FPAIRGIQAGREFYVSMCPLRLLPKIFTFDDEELIPELRAQRVLNKARIPEMARYIISNMNDYVFSAITASIDAKVRFEA
LGQSGEANRVGSLHIPMDARFIINDGQHRRAAIELALREKPDLADETIAVVFFLDKGLNRCQQMFADLNRYAIRPSKSLG
ILYDYRDDMALLAKSVVLKSPVFKDVVEMEKSTLSPRARKLFTLSSIYFATNELLESIDGSQEEKTNMAINYWVEVAKYI
KEWNLVRARKMTSAEVRREFIHSHGIALQSIGKVGNHLLRNNPANWKRTLKKIENIDWSRSNSQLWEGRCMIGGRVSKSS
HNVTLTTNAIKAALSL
4857 PF13960
(DUF4218)
 click to view
Estimated TM-score=0.50;
easy target.		 >Domain of unknown function (DUF4218) (Length=113)
LCGKALSAPYLEKLQDQIVLTLCHMEMLFPPSFFTVMVHLMVHLVEEAKLGGPIHYRWMYPIERYLGHLKSYVRNKAQLE
GSIAQGYLMEEILTFCSRYLENIETRWNRPRRV
4858 PF13770
(DUF4169)
 click to view
Estimated TM-score=0.50;
easy target.		 >Domain of unknown function (DUF4169) (Length=55)
AEIINLRRVRKQRARQEAEQQAQQNRITFGRTKAERSLTEAERDKAARTLDGHRL
4859 PF13755
(Sensor_TM1)
 click to view
Estimated TM-score=0.50;
hard target.		 >Sensor N-terminal transmembrane domain (Length=65)
RRFLGHHIFSSLTRRILFLNLAGLAVLVTGILYLNTFRDGLIDARVESLMTQGEIIAGAIAASAT
4860 PF13651
(EcoRI_methylase)
 click to view
Estimated TM-score=0.50;
hard target.		 >Adenine-specific methyltransferase EcoRI (Length=355)
TLNAAKSAKKDEFYTQMADIERELQHYWQHFRGKVVLCNCDDPYESNFFKYFALRFNQLGLKKLICTCYNGSPVAGTQLS
LFGLDTEGNEKKIAYKVEISEVKDVNGDGAVDLADVEYLIQNDKNVLSELKGNGDFRSKECIELLKQADIVVTNPPFSLF
REYVAQLMEYGKKFLIIGNVNALTYRDIFPLIKENKMWIGPSITSGDRKFNVPDDYPLNAATCGIDDDGRKYIRVKGVRW
FTNMDHNKRHEELDLVCRYSPEEYPQYDNYDAINVDRTSDIPCNYDGIMGVPITFLDKYCPEQFEIVNANDYSKKYANIN
IKDVVSKEVELLSPGADGWHINGKKKYARIFIRNK
4861 PF13260
(DUF4051)
 click to view
Estimated TM-score=0.50;
hard target.		 >Protein of unknown function (DUF4051) (Length=51)
MFIAWYWIILIVLVVVGYICHMKRYCRAFRQDRDALLEARTKRFRQTSEGD
4862 PF13217
(DUF4025)
 click to view
Estimated TM-score=0.50;
hard target.		 >Protein of unknown function (DUF4025) (Length=50)
ENKNDTTDVAGKYFEPSDYKGSTQLEKGLAETHEQVSDDYFEGTIDQNLD
4863 PF13198
(DUF4014)
 click to view
Estimated TM-score=0.50;
hard target.		 >Protein of unknown function (DUF4014) (Length=72)
MTKILRKNYPRQSRFKEALFFPLFLILMVPISPIFFIWLAGVQAEKIAEWYSSIVWGPFNKLHNKLNPYRED
4864 PF13179
(DUF4006)
 click to view
Estimated TM-score=0.50;
hard target.		 >Family of unknown function (DUF4006) (Length=65)
MENTNRNLFGLHGITGMLIATVLLLSILAGLTVWGISAQQNVANKPYKITDPQAIKMRDTQNATQ
4865 PF13130
(DUF3952)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Domain of unknown function (DUF3952) (Length=98)
SLLSGCGFGETKIEYEPFVKALDEGDMKKVMSASDDGYAYVKQRGIYSTYEQKEDGEHSKTIYQTSKGIYNTKDKSLYGN
TTQEITSEVDNKNYKEEV
4866 PF13117
(Cag12)
 click to view
Estimated TM-score=0.50;
hard target.		 >Cag pathogenicity island protein Cag12 (Length=92)
VPVAWDKAAEPLNTRLPQWRDNNVTVPSPTVNGKWTLSVSTHSFHDTTWTPAVFYAAAHSTRIVVSAQSGTDFFNARNWL
RQNGAKGVIEYQ
4867 PF13082
(DUF3931)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Protein of unknown function (DUF3931) (Length=66)
MDNNEKKCNVISIDGKKKKNDTYSYPKLVVENKTYEFSSFVLCGETPDGRRLVLTHMISTDEFAGF
4868 PF13071
(DUF3935)
 click to view
Estimated TM-score=0.50;
hard target.		 >Protein of unknown function (DUF3935) (Length=70)
TRLKQVFGIIISFFVFWFSMLGVQMFAEFLDIESLKFVAGKTEAARAFYSPYPFLIVFLITLLSLYFFVI
4869 PF13068
(DUF3932)
 click to view
Estimated TM-score=0.50;
hard target.		 >Protein of unknown function (DUF3932) (Length=81)
MKEVFRLQTDFSSSFDRWVSSFVSNYPTQLKWSTLKELIHEYTSSHTNQTVPEYISSSITYYAQRISTANNTEIIIYTNP
T
4870 PF12927
(DUF3835)
 click to view
Estimated TM-score=0.50;
hard target.		 >Domain of unknown function (DUF3835) (Length=77)
APVVVEREVPQDTVPAEPDELDPHLLHQEVATEYHKMRNTMIHRQGGFMREEEGEIVPFTEEEGGPKKMSRFKAARL
4871 PF12828
(PXB)
 click to view
Estimated TM-score=0.50;
hard target.		 >PX-associated (Length=124)
QTLTGKQEHYLKRELISDQVKFEISELNSPTALKRFGAPFKSDYGEVSPLESELPILRYIFVHHVRDFPFLDKAREKEFW
QDKLQVFLESFAMKNISSSEDRLEETKRRKLALKSQKLVELMMV
4872 PF12813
(XPG_I_2)
 click to view
Estimated TM-score=0.50;
easy target.		 >XPG domain containing (Length=241)
PAFLVPAVLDALRGSKYGPITEVMGGEADGYCAVHVRKSGGLVLTSDSDLLVHDLGENGGVIFFTDIDLDSENSKLVAPQ
FRHAEICRKLSIKPDVGFSYMAFEISADPHLTLEQAAERSRRGEAVMYSREEYDSFIKTYLLPETAPKTVATCGLQLDPR
ISELVLRYLQITTTASKEKDASLEMFLPFLLDCPSRTSAWEVSKPIRKLAYSLLQSGQKTSLKTVSEMRRLQTLSSGSQV
D
4873 PF12752
(SUZ)
 click to view
Estimated TM-score=0.50;
hard target.		 >SUZ domain (Length=52)
QEPKIMILRRPQGKPDATANGMVSLKQKQPLKTLEQRQQEYAEARLRILGDA
4874 PF12653
(DUF3785)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Protein of unknown function (DUF3785) (Length=134)
YKFSHNGKEYVLTKENCDGIFFDDEATVSGLSMDIILDALNEGEEVNFSNEYYMGKCSCNSQEEINKSYRYLEYHFFIYT
KNNQYVINTIGNEYKHTSFNQLFGFGKVDDSYIVSVTVCPNCGEYSISVEQCTV
4875 PF12634
(Inp1)
 click to view
Estimated TM-score=0.50;
hard target.		 >Inheritance of peroxisomes protein 1 (Length=130)
ETLYSHPNVKIISFTATGRAYARSPGGPALSNVDPPSSLSWSSQLERTIAVGPFRIYRAPRSVAFLSCGSALQPILRKSQ
CWCIDEVNSRFVLQIRRPNYWRIELPVDDPEDQQRAEELREVLDKILQFE
4876 PF12585
(DUF3759)
 click to view
Estimated TM-score=0.50;
hard target.		 >Protein of unknown function (DUF3759) (Length=88)
EQVNSAGHKADLSHELLAAAASYEAVKKYEEHVANNGAPDSHAKAKEFLAAAAGGFIDRIVETKGLDYIDKKKAEHAAKN
QTYEVVTE
4877 PF12566
(DUF3748)
 click to view
Estimated TM-score=0.50;
hard target.		 >Protein of unknown function (DUF3748) (Length=121)
HVGVVTVSPTEPVRYAFIHGPECPDEQWHYDFHHRRGVIVSEDSSGKAVTLDAMDITAPYTPGALRGGSHVHVFSPDGSR
LSFTYNDHVMHKLDPALDLRNIAVAVPLKPVEPPKHHPREY
4878 PF12558
(DUF3744)
 click to view
Estimated TM-score=0.50;
hard target.		 >ATP-binding cassette cobalt transporter (Length=72)
NILEEQGIREPLYVTALKHAGCTITAQDHPQHVETMNFEPYKTQVREWFETTQIPQKQETQEKVLKVDHLHF
4879 PF12541
(DUF3737)
 click to view
Estimated TM-score=0.50;
easy target.		 >Protein of unknown function (DUF3737) (Length=274)
EIKQEYLTGERALFQGADLKIYDSIFADGESPLKESHDIELENCMFKWKYPFWYAKNITARNCTWFEMARAGVWYTDHIT
VEDAVIEAPKNFRRCRGVNLKNVNLPNAAETLWNCEDVELDHVTAKGDYFAMNSRNMVLRDFQLVGNYSFDGVKNMEIHN
ARMLSKDAFWNTENVTVYDSFISGEYLGWNAKNLTLINCTIESLQGMCYIDNLVMKNCKLLNTTLAFEYSTVDAEVTGKI
DSVMNPSGGVIQADSIDELIIEKDKVDPEKTRII
4880 PF12516
(DUF3719)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Protein of unknown function (DUF3719) (Length=64)
MLFEGKVSPQTQNLWAECSEWARRSLHLRVLGRQLVLPTDEGVQHFQGSKPASAVHRPFSDNCE
4881 PF12501
(DUF3708)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Phosphate ATP-binding cassette transporter (Length=164)
LLIIALIGFIAFLAGRARSFARSGGKLASLHSLPGYHGSYVAIWAMLPALLLLAVWLIAAPIYIDYTVRSSLPEPVQNQG
AATVQLALGQVKSVAAGFERLSADELAAIENGSTNMREVLASKGVALAGEGEPYMVQSAQQFNAMRQYSRWLMSAVVLLV
SVAG
4882 PF12472
(DUF3693)
 click to view
Estimated TM-score=0.50;
hard target.		 >Phage related protein (Length=57)
LLGCHADRNDNPNIKAMWESIAKKFNGRGLQGISMACGGLAMWISSPNEAIAQCALC
4883 PF12463
(DUF3689)
 click to view
Estimated TM-score=0.50;
hard target.		 >Protein of unknown function (DUF3689) (Length=308)
VHKMIAEFKLIPGLNNLFDKLIWRKPSASTLVLHGHNQNCDCSPDISLKIQFLRLLQSFSDHHENKYLLLNSQELNELSA
ISLKANIPEVEAVANTDRSLVCDGKKGLLTRLLQVMKKEPAESSFRFWQARAVESFLRGVTSYADQMFLLKRGLLEHILY
CIVDSECKSRDVLQSYFDLLGELMKFNIDAFKRFNKYINTDEKFQIFLNQINSSLVDSNMLVRCIALSLDRFENQSDDIK
VAEVLSECRLLSYMTEGSIRMNFLFRLINIIHVQTLTQENVSCLNTSLVILMLARRKGRLPCYLQNIR
4884 PF12448
(Milton)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Kinesin associated protein (Length=167)
RQRSMGPSPMNIPGSNQTSSMNSRRSSCMSTPRSSMYGGDGVEIDNRTNSLLLETQSPQDGSNDSNRKPGTPGTPGSHDL
QAALRRLSLRRDNYLSERRFFEEERERKLNALAEDKSQFYEDSEDGGGPLTPADSIMSLGLNSVFSIYSSRSYLPEKLQI
VKPLEGS
4885 PF12446
(DUF3682)
 click to view
Estimated TM-score=0.50;
hard target.		 >Protein of unknown function (DUF3682) (Length=128)
SAGGHDTGGVSSGSSVPAHPPSPGPFGAPSPGVDSSAGSSGGKAGSSGSHPTNTTGDSSTGDQTPAAAAANNSSPPEIPA
GTTSGTGHTRQEEEEEEEDHEKQHQSDETQVQQHQQHEHPAENGEESA
4886 PF12420
(DUF3671)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Protein of unknown function (Length=122)
KKGIYKLDCYCEQKIFNRIDKIYKVAKNVNNDRNSINKIINKKYGLKFVLLCLYPLTGLVMPWLSSLQDKTSGTEYDYSK
TILGKTGLPHEAATSISAILIISCFIVLSVIIYIIIKFIKYE
4887 PF12413
(DLL_N)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Homeobox protein distal-less-like N terminal (Length=82)
KDSPTLPESSVTDMGYYSGQTAHGHHEYYQSQPYGQPMNSYHHQFNLNGMGAAGAYATKSEYPYTNGYRQYGHYNRDHLQ
AS
4888 PF12406
(DUF3664)
 click to view
Estimated TM-score=0.50;
hard target.		 >Surface protein (Length=99)
DRQLNPIDFDPNDDQHPLDPDQLIDQIEPSEQPAQQEPIEPQQPTQPSTEPEELQPETVTVEVPEPVTSEEPKESDQTEE
QKHEEPEASPAPEPVDEPA
4889 PF12356
(BIRC6)
 click to view
Estimated TM-score=0.50;
hard target.		 >Baculoviral IAP repeat-containing protein 6 (Length=167)
VAALKQSSPLSYVGPSAPPSREYGLLMPSPSHLHCVASVLWHSYELPVDYDLPGLLNRELFELLYNWSMSLPSNMVLKKA
VDSLLCSMCHIHPSYFSLLMSWMGIVAPPAAQTNAQRRMAMTDDGKKQHDLNSAASLTDDSKHARTPVTVPISLSESQLV
TLAAASQ
4890 PF12337
(DUF3637)
 click to view
Estimated TM-score=0.50;
hard target.		 >Protein of unknown function (DUF3637) (Length=67)
MACLKIFSLKRKDKSHSYSPREIELKYNSDFAFKPRPLAPLLRLEPSDTTTRRIECAEVEYDLWYPN
4891 PF12266
(DUF3613)
 click to view
Estimated TM-score=0.50;
hard target.		 >Protein of unknown function (DUF3613) (Length=66)
TPVVRPAAPATAEPQTATRAWLAIQASGRAASPVRQSATAAERQRAYQRYLKSYEHEIPEYLLEDR
4892 PF12254
(DNA_pol_alpha_N)
 click to view
Estimated TM-score=0.50;
hard target.		 >DNA polymerase alpha subunit p180 N terminal (Length=66)
LAELKALRQAGKKAFDNYQVDDINELYEEVDETQYKKIVRDRLNEDDFVVDDNGEGYADDGREEWD
4893 PF12253
(CAF1A)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Chromatin assembly factor 1 subunit A (Length=73)
KLFQFVENYRPAYYGSWRRRSRIVTGRRPFAQDVRQLDYSVDSDDEWEEDEPGESITQSENEEEEEEKDEEEE
4894 PF12227
(DUF3603)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Protein of unknown function (DUF3603) (Length=214)
LLDQVPLLKVEPNLFNYIENDLSELPQQLLDDIYQKAYLRKNHERIQLDYCFVVTDGMGILAVDTIGYNIPIRKSRLIPR
QEQLVYEMISTHEAKKYNFNQQQNKKDFHILSPDPLLMIGLTRKERQLKQLLFMALDQLLSSNNEAEIRYWYTEWCPENY
SKIQEMNFTEAWEQLYEAIKYGWSKKHETFCENLIKGQPFFEKLWEMEHGPKVN
4895 PF11990
(DUF3487)
 click to view
Estimated TM-score=0.50;
hard target.		 >Protein of unknown function (DUF3487) (Length=118)
VTFLPHRLNRQPVVVRGLTADELWICAGLSATAGLLLGLPLAWLTSSIAMVPTMIVAGIVLGVFVGGGFLRRQKRGRPDT
WLYRQLQWRLTLRHPALAVHLGGRRLITRSGYWTTRRS
4896 PF11748
(DUF3306)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Protein of unknown function (DUF3306) (Length=121)
GFLGRWSRRKQEARDPETASQTEVEVAAAPDLPPQREAPAAPVQQLTAQPAAQPAAAARPLPTLQDVQALTPESDFSSFV
TRGVAPEVRNAAMKKLFSDPHFNVMDGLDVYIDDYTQPTPL
4897 PF11568
(Med29)
 click to view
Estimated TM-score=0.50;
hard target.		 >Mediator complex subunit 29 (Length=139)
EKLDNISKVKTLVGPLRDSLAATLKTAARTLHQNSLVDIGSLKNADDSPPRFDKSMEEFYSICDQIELHLKTSIECLNQG
ASSQRYLNMTVTPQRSEPVPGQQEMNTLTYPQYLATVRTQVSFAKELHDMLLAAAQNVT
4898 PF11382
(MctB)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Copper transport outer membrane protein, MctB (Length=311)
MISMRQHAISIAAIFLALAIGVVLGSGMLSSGLLSGLRDDKADLQNEIEDLNQQSNQLQQQLNSADGFDAAVGGRVVRDS
LAGRTVVVITAPDADPSDLDGVNRLVTAAGGAVTGRVSLTDSFVDATGGDRLRTVVTNVIPAGITLRTGAVDQGSLAGDL
LGSVLLLNGQNSEPQSTPDEMNLALDSLRSAGFISYDDGAVKPAQLAVVLTGDNKSESDAATGNRGAVIARFAGALDGRG
AGTILAGRPGSAEGSGPVAVARADAALSAGLTTIDNIDRESGKITTPLALQEQLNGGAGRYGTGPGAAAVT
4899 PF11349
(DUF3151)
 click to view
Estimated TM-score=0.50;
easy target.		 >Protein of unknown function (DUF3151) (Length=125)
GPPPTHLPDDPEPREALAAGTAPAEVAAQHPTSSLAWAQLADDAFERGSVVESYAYARTGYHRGLDALRRNGWKGHGPVP
WEHEPNRGFLRALHALARAAQAIGEQEEYERCSQFLKDSSPTAAQ
4900 PF11341
(DUF3143)
 click to view
Estimated TM-score=0.50;
hard target.		 >Protein of unknown function (DUF3143) (Length=65)
QGCQQDENELHCWRLQKPSWQAELWLDIEQITVRYIQAGENGQDIQRSFKYSLSREDIEQAVFSG

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