Home Research COVID-19 Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●QUARK ●LOMETS ●COACH ●COFACTOR ●MetaGO ●MUSTER ●CEthreader ●SEGMER ●FG-MD ●ModRefiner ●REMO ●DEMO ●SPRING ●COTH ●BSpred ●ANGLOR ●BSP-SLIM ●SAXSTER ●ThreaDom ●ThreaDomEx ●EvoDesign ●GPCR-I-TASSER ●BindProf ●BindProfX ●SSIPe ●ResQ ●IonCom ●STRUM ●DAMpred

●TM-score ●TM-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13

[Back to server]

Modeling of Pfam protein domain faimilies by C-I-TASSER (Page 46)

Search by Pfam ID:

Go to page (83 pages in total): [First page] << < 41 42 43 44 45 46 47 48 49 50 51 > >> [Last page] [All entries in one page].

# Pfam ID C-I-TASSER models ranked
by estimated TM-score
(click to view)		 Full name and representative sequence
4501 PF06327
(DUF1053)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Domain of Unknown Function (DUF1053) (Length=106)
TRYLESWGAAKPFAHLHHRDSMTTENGKISTTDVPMGQHNFQNRTLRTKSQKKRFEEELNERMIQAIDGINAQKQWLKSE
DIQRISLLFYNKNIEKEYRATALPAF
4502 PF06278
(CNDH2_N)
 click to view
Estimated TM-score=0.52;
hard target.		 >Condensin II complex subunit CAP-H2 or CNDH2, N-terminal (Length=112)
LLQPVRDLTKNWEVDVAAQLGEYLEELDQICISFDGGKTTMNFAEAALLIQGSACIYSKKVEYLYSLVYQALDFISNKKR
VQQPTSVGADGEDKDATFAHRNDEEEFLSLDD
4503 PF06275
(DUF1031)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF1031) (Length=79)
MTAFRIIPTVKLFNLAKKARCDGYGSNSVYITVRTKGSHELVEIYRDIKSVFNNGKDMTWNQLFNFMDKQLTESLVVFE
4504 PF06189
(5-nucleotidase)
 click to view
Estimated TM-score=0.52;
hard target.		 >5'-nucleotidase (Length=270)
FQVEHENEPFKPGPAFPFVKALMNVNSRLRELYPDSEELFDVILMTNNPAQVGVRLINSINHYDLTIERFCMTGGQSPIG
YLEAYMTNLYLSKDSDKVTEAIEAGIAAATMFMPEKEMELSDTQLRVAFDGDAVLFSDESEIIVKKHGLDTFFEHEKRYE
NQPLAQGPLKCFLEALGKLQRKFYSKNERLNCPIRTFLVTARSAASSGARVLKTLRSWGLEIDEALFLAGAPKGPLLQKI
RPHIFFDDQMFHIEGAKDLGTIAAHVPYGI
4505 PF06138
(Chordopox_E11)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Chordopoxvirus E11 protein (Length=133)
MEAINVFLETASGRTRILYSADTCECPTQCRATARRAAASVLEELDKYIVVSESTFTLAVRDYDIFYYLCDRGRLSLAEN
EFYLFNHGLLFTDDAGEEPVTGVGFVITDSMHVHVKPREGIAVTVYSDNSRAY
4506 PF06069
(PerC)
 click to view
Estimated TM-score=0.52;
hard target.		 >PerC transcriptional activator (Length=89)
MVHDRIAEELEAKGFYRRAAARWGEVMLLVETDKERHQVTMRRLECSRKAQRPPEPPDNYGDLRKAVDRTYAEMGIDGVS
DEIWRNYPD
4507 PF06015
(Chordopox_A30L)
 click to view
Estimated TM-score=0.52;
hard target.		 >Chordopoxvirus A30L protein (Length=72)
EEDINESNFIHLLTNLSNNDTDSEFSATLLTIKEIISQINLRVLSINKKSKKNSRQNEQQLNYVPRRENTRY
4508 PF05975
(EcsB)
 click to view
Estimated TM-score=0.52;
hard target.		 >Bacterial ABC transporter protein EcsB (Length=382)
KRLWKERFGKTSKELSRYLRYIFNGHIVIVMVFLLGTAAYYYQEWLKTLPEQFPAAPVMALILAILLTYSPIYTFLSEAD
KVFLLPLENRLSGYFKRSMAVSFLVHAYLLIVGLGIFMPMYALVNEGDFQAFLPFLLILLALKAVNLLIRWKIQYYVDTN
VHLLDAFVRYAVNAVFLYLLFSGASPIFTLAVGVLLVVLYWYFSMKSKNKALKWEFLIDQEERRMTSFYRLANMFTDVPK
LRDRVKRRKWLDWLLASIPFKQEETFKNLFIRTFLRSGDYLGLFIRLTIIGGGAIYLISFGIGQVLLVLLFMYLTGFQLL
PLWNHYQNKLWVKLYPVQEKLKEKSFRQLLSGILYLQSFLLSIAVLAKGDWLASLLSLAAGI
4509 PF05931
(AgrD)
 click to view
Estimated TM-score=0.52;
hard target.		 >Staphylococcal AgrD protein (Length=45)
NTLFNLFFDFITGILKNIGNIAAYSTCDFIMDEVEVPKELTQLHE
4510 PF05887
(Trypan_PARP)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Procyclic acidic repetitive protein (PARP) (Length=135)
MAPRSLYLLAVLLFSANLFAGVGFAAAAEGPEDKGLTKGGKGKGGKGTKVSDDDTNGTDPDPEPEPEPEPEPEPEPEPEP
EPEPEPEPEPEPEPEPEPEPEPEPEPEPEPEPGAATLKSVALPFAIAAVGLVAAF
4511 PF05841
(Apc15p)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Apc15p protein (Length=134)
IALFNDIRRNQDPAGAKHEKYSMRDLRSKKNQHGNCMNDDDDNSLERFIRRKKSRVIKYIPSLSAYNVFSEFPYFPTSSG
QLQDGKLDEFMMLSEQYKSKLPKIRKLGWNRFKPIGINKTMYDSEMLKSRVQAQ
4512 PF05831
(GAGE)
 click to view
Estimated TM-score=0.52;
very hard target.		 >GAGE protein (Length=107)
MSRCVRSRSLWNIIPEEQEPSEPIGPVVAQEPSEEKPEQKELPTESHDITPDQEKEVEGPPEVEGPDTEEVLQELAQLKI
EDEGRHGPDVKEAVLSKAESIYVAEAG
4513 PF05629
(Nanovirus_C8)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Nanovirus component 8 (C8) protein (Length=153)
DWAESQLKTCTHGCDWKKISSDSADNRQYVPCVDSGAGRKSPRKVLLRSIEAVFNGSFSGNNRNVRGFLYVSIRDDDGEM
RPVLIIPFGGYGYHNDFYYFEGKGKVECDISSDYVAPGIDWSRDMEVSISNSNNCNELCDLKCYVVCSLRIKE
4514 PF05586
(Ant_C)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Anthrax receptor C-terminus region (Length=86)
VRWGEKGSTEEGARLEKAKNAVVSVPEDADEPMVKRPVPRAAPAPHGTENKWYTPIKGRLDALWALLGRQYDRVSLMRPT
SADKVR
4515 PF05542
(DUF760)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF760) (Length=82)
LSDLIQEIEPLDVSLIQKDVSPTTLDAMKRTISGMLGLLPSDRFQVFIEAWWESLSKLLVSSMMTGYTLRNAEYRLCLER
NL
4516 PF05342
(Peptidase_M26_N)
 click to view
Estimated TM-score=0.52;
hard target.		 >M26 IgA1-specific Metallo-endopeptidase N-terminal region (Length=250)
KLKYYQGYTLSTTMVYDRGEGEETEKLEDKQIQLDLKKVEIKNIKETSLMNVDAEGNETDKSLLSEKPTDVSQLYLRVTT
HDNKVTRLAVSSVEEVVVDGKTLYKVVAKAPDLVQRRADDTLSEEYVHYFEKQLPKVNNVYYNFNELVKDMQANPTGEFK
LGADLNAANVKPNGKSYVTKPFKGKLLSNDGGRFTIHNIERPLFANIEGGKIHDINLANVNINMPWADKVAPIANVIKNN
ATIENVKVTG
4517 PF05341
(PIF6)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Per os infectivity factor 6 (Length=102)
IRWQILNGDEIEVSPEHRSLAWRELIINVASNTPLDNTFRTMFQKADFENFDYNTPIVYNLKTKTLTMYNERIRAALNRP
VRFNDQTVNVNIAYVFLFFICI
4518 PF05218
(DUF713)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF713) (Length=187)
EVRELREESKKRFQILMNCIALRRHFEEQEDNWKIWIQNCRNHIVSLHRFFSIFEQDYGTILRNSKKLDSDDLKDLQSEK
LRVSSFVFKTFYELEEDFEQLKELEHHCQEVIFLRILQKCVADVANKLLEIIELLVQQEIDRDIFMRLEESIANLMSADL
IYSTKKLRELCKTEERSENFQNVQFPK
4519 PF05210
(Sprouty)
 click to view
Estimated TM-score=0.52;
hard target.		 >Sprouty protein (Spry) (Length=105)
RLRCKHCQELYTEQHNPRGSCEYAPDPIKRGIAKVSCLSCAQGMLYHCMSDAEGDFSQNPCSCSTEEGCGRRWFGLALLS
LIVPCLWIYPPLRAVHWCGTSCGMC
4520 PF05120
(GvpG)
 click to view
Estimated TM-score=0.52;
easy target.		 >Gas vesicle protein G (Length=82)
LLSPIMGPINGVVWIAEKIEERANTEFDDQENLNKQLLTLQLSLDMGDITEEEYDAQEEEILLKLQELEEEARLEAESEE
YE
4521 PF05052
(MerE)
 click to view
Estimated TM-score=0.52;
hard target.		 >MerE protein (Length=75)
MNSPERMPAETHKPITGYLWGALAVLTCPCHLPILAIVLAGTTAGAFIGEYWGIAALTLTGLFVLSVTRLLRAFK
4522 PF04834
(Adeno_E3_14_5)
 click to view
Estimated TM-score=0.52;
hard target.		 >Early E3 14.5 kDa protein (Length=100)
SCRFTQIWNIPSCYNKQSDLSEAWLYAIISVMVFCSTIFALAIYPYLDIGWNAIDAMNHPTFPVPAVIPLQQVIAPINQP
RPPSPTPTEISYFNLTGGDD
4523 PF04830
(DUF637)
 click to view
Estimated TM-score=0.52;
hard target.		 >Possible hemagglutinin (DUF637) (Length=176)
AAYSGMTALTSQAAVALVDNKGNLSKTFQAMSSSDSVKSLVTSMVIGGALAGFDEVMQFSKAANGTTVIDPAKAKLPMLS
NGDWSKVAQRVAGQSVISSSIGTAINGGSFKDNFTTALLSNIGSQINAEGAKFIGDKGEVLGLPIDDPRRVISHAVIAGV
AAEIGGGNAKGAAAGA
4524 PF04783
(DUF630)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF630) (Length=59)
MGCGPSKVDDLPLVTLCKERRDFIKTASHHRYALAASHVAYFQSLKNIGDALRQFVDEE
4525 PF04731
(Caudal_act)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Caudal like protein activation region (Length=133)
MYPGSARCTSNNLPVQNFVSAPAYSDYMGYHPVPALDTHGQPAPAWGSHYGPQREDWSAYGPGPSSAVPAAHINGSSPGQ
GSYSSADYSALHPAAAAGLPPVDAINAQQISPNSQRHSSYEWMRKTVQSTSTG
4526 PF04720
(PDDEXK_6)
 click to view
Estimated TM-score=0.52;
very hard target.		 >PDDEXK-like family of unknown function (Length=226)
IFGFLEEEATVFSSLEYDMSDKQLEVEYEENENPEDIEDKKIFWETQSQNLHATLYRTTSLESKIRNITKEVLGEVDMTE
NVCACSRPISGRCRSCRMSEICNRLQNSGYNSAICKSKWKSSLDIPAGEHTFVDVIDNSNSKKGEVRVVIELELRGQFAM
KKGSEEYNSLVCKLPEVFVGKIDRLQTLVKILSNAAKKCMKEKKMHLGPWRKERYMQAKWLRVTER
4527 PF04641
(Rtf2)
 click to view
Estimated TM-score=0.52;
easy target.		 >Rtf2 RING-finger (Length=279)
MGCDGGTIPKRHELVKGPKKVEKVDKNAELAAKWKYCALSQEKLRRPIVACELGRLYNKDAVIEYLLDKSAERPNVEIAA
HIRGIKDVKELNLTDNPAWEGDRRNAKGDCYEDMHRAMFICPVVGLEMNGKHKFCYLQTCGCVFSERALREVKTEICHKC
GDPFRDEDIVVLNGSKEEQEQLQKTMEERRAKAKAGKKSKKNKGLETVSKPVESEASSESTSTPVNGGGSSSGDSAPGPS
GSSKTVKPVAAVGSKRSIQNMEGKSEAYKSIFTTHSSAK
4528 PF04531
(Phage_holin_1)
 click to view
Estimated TM-score=0.52;
hard target.		 >Bacteriophage holin (Length=82)
INWKVRLKNKTFWLSLIPAVLLLVQVVAAVFGYTLDLGELGNKLLAVVNALFAVLSILGVVTDPTTKGVSDSTQALSYEE
PK
4529 PF04434
(SWIM)
 click to view
Estimated TM-score=0.52;
easy target.		 >SWIM zinc finger (Length=42)
YQVECGPGKKHVVDLVQNSCSCRNWDLTGIPCMHALAVIHVK
4530 PF04404
(ERF)
 click to view
Estimated TM-score=0.52;
hard target.		 >ERF superfamily (Length=160)
FRKDMKTLKMNLPGIDKNLKGYGYKYQNFNEIVRKIKNVINKHNLELDFEQFPTFTHDPYGRVHVVRTTFYSTISGYEES
FDTPILTENLQWNNENGSKSVNTTPQLVGSAITYFKRYALVACLNIESEVDTDAAPIYNNYENGNSMSNKQVNINQEQEQ
4531 PF04376
(ATE_N)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Arginine-tRNA-protein transferase, N terminus (Length=78)
SSCGYCKDVRGQDAPSSSEKGGVWAHRMLVDDYAGLLDKGWRRSGKYLYKPNNKVTCCPQYTIRLDVTRFKMSRSQKR
4532 PF04332
(DUF475)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF475) (Length=318)
FDNAVVNAGILKKMNAFWQKIFLTIGILIAVFGMRLVFPVVIVAISAQLGPIEAVDLALTDKDRYQELVTDAHPSIAAFG
GMFLLMIFLDFIFEDRDIKWLAWLERPLAKLGKVDMLSVCIALIVLLVSAITFGAHAHQHGGAHADKAETVLLAGIAGLI
TYMIVGGLSGYFEDKLEEEEEREHEEEEEAARTGKPKSAVRLAGKAAFFMFLYLEVLDASFSFDGVIGAFAITNDIVLMA
LGLGIGAMYVRSLTVYLVRQGTLDDYVYLEHGAHYAIGALAVILLVTIQYEIHEIITGLVGVALIGWSFFSSVRRNRA
4533 PF04306
(DUF456)
 click to view
Estimated TM-score=0.52;
hard target.		 >Protein of unknown function (DUF456) (Length=136)
VLPVLPGPPLSYVGLILLHLTERYQFSTNFLVIWGIITVVVYLLDYFIPVWGTKKFGGSKRGVWGSIIGLLVGMFLFPPF
GIIVGPFAGAVLGELSGGKQSKEALRSGFGSFVGFLVGTLLKLIASGMMAWYFFVE
4534 PF03818
(MadM)
 click to view
Estimated TM-score=0.52;
hard target.		 >Malonate/sodium symporter MadM subunit (Length=59)
EMLTGVLEKNGLVTAFALVGITMYLSYIISNKLTKGRIHGSAIAIILGLVLAYFGGIHT
4535 PF03782
(AMOP)
 click to view
Estimated TM-score=0.52;
very hard target.		 >AMOP domain (Length=142)
NDKCISWRDAEMNALPNFLKETPDCPCTLDQARADTGRYHTDYGCDIEKGSVCTYHPGAVHCVRSIQASPQFASGQQCCY
DSAGAQVLTFDSIGGSTPDRGHDWGSPPYRKPPRVPGFSHWMYDVITFYYCCLWSDNCQYYM
4536 PF03768
(Attacin_N)
 click to view
Estimated TM-score=0.52;
hard target.		 >Attacin, N-terminal region (Length=66)
LGGQISTNPAGGNNAKVDFTQGIGTPEHNLIGQAFAAGNTKGGPVATGGTLQYNNNGFGAAITKEH
4537 PF03670
(UPF0184)
 click to view
Estimated TM-score=0.52;
hard target.		 >Uncharacterised protein family (UPF0184) (Length=83)
MSGPNGDLGMPVEAGAEGEDDGFGEAEYAAINSMLDQINSCLDHLEEKNDHLHARLQELLESNRQTRLEFQQQLGEAPSD
ASP
4538 PF03581
(Herpes_UL33)
 click to view
Estimated TM-score=0.52;
hard target.		 >Herpesvirus UL33-like protein (Length=72)
IDFQSMLPPDIKIIAPTTYTRLNLLNYCQFLELFMQLRASGCRCEHGEILESKIRAVRQVISKIVETDTVFN
4539 PF03257
(Adhesin_P1)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Mycoplasma adhesin P1 (Length=91)
TGSGQQQGSTTTTSAGNPDSLKQDKADKSGNSISVQEATSGDNLTNYTNLPPNLTPTSDWPNALSFTNKNNAQRAQLFLR
GLLGSIPVLVN
4540 PF03087
(DUF241)
 click to view
Estimated TM-score=0.52;
hard target.		 >Arabidopsis protein of unknown function (Length=231)
GLCMLADLHIFLEDLLNMPSTQKMMSNHQGEKCMEELLDGSVRILDVCGITRDTMLQIKENVQSLHSALRRRKGDSSIEK
IIAEYNFFSKKMKKNAKKLITSLKQMESKFGVSPLLNQDQQLAALVRVLREVIVMNMSILQSLLTFLVVPASKSKATKWL
LVAKLMNKGVIACEENQKNFNELQSVEASLSTLLSEGTNVAKMQTAHERLEALENGIQSIENGLESVFRRM
4541 PF03080
(Neprosin)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Neprosin (Length=216)
INLWDPQVSHDQVSLATMAIAGGPKIEQLASISVGWMVNPLLYQDHIHLYTYWTADGYNKTGCYDIRCPGFVQVSKRIPL
GVLLQPISVYNGTQKEMDLSLHQVVTSRVSGVNVGYWPQSLFIASGLVKGADLASWGGQVYSPKTEKSPIMGSGHFPKEG
FGKAAFVNNIHIMNGKGEALIPQIYTIETHESSPNCYKAKFVHDEDEPWIRAVYFG
4542 PF03025
(Papilloma_E5)
 click to view
Estimated TM-score=0.52;
hard target.		 >Papillomavirus E5 (Length=71)
LSLIFLFCFCVCLYVCCHVPLLPSVCMCAYAWVLVFVYIVVITSPATAFTVYVFCFLLPMLLLHIHAILSS
4543 PF03017
(Transposase_23)
 click to view
Estimated TM-score=0.52;
very hard target.		 >TNP1/EN/SPM transposase (Length=66)
DVILFTILRSELPAARGTVISINPNTMVGGQPLGNEYCEVVVNVVMKRDAMLPRSYGDMKTMASAL
4544 PF02512
(UK)
 click to view
Estimated TM-score=0.52;
very hard target.		 >Virulence determinant (Length=96)
MSTHDCFSKEKPVDMNDISEKSSVVDNAPEKPAGANHIPEKSAREMTSSEWIAEYWKGIKRGNDVPCCCPRKMTSADKKF
SVFGKGSLIRSIQKNN
4545 PF01672
(Plasmid_parti)
 click to view
Estimated TM-score=0.52;
hard target.		 >Putative plasmid partition protein (Length=85)
AYDYLKIANAIEEGIIEEEFLVQNGFRQTLFVLRNQESATIKKSKQNPIKPLRFQLKKQESYDFYKSNAKFTSFLMDELF
ENQKD
4546 PF01666
(DX)
 click to view
Estimated TM-score=0.52;
hard target.		 >DX module (Length=75)
FQTNMDCNANEEVDQKFDFMFCHNDTGNLWVMGQYNVNGDEVIKHWTHCNTNNDCGEGLVCVKEDLCRYRCYDDP
4547 PF01629
(DUF22)
 click to view
Estimated TM-score=0.52;
hard target.		 >Domain of unknown function DUF22 (Length=108)
AEMLYWVDRVGGKVEKLEVELKPFGYKMAPVTQWKTLIADGDAEVERGKPTIIKVKTIEIPENTIVGPLNIMRHALGVVA
DVVECGIPGRVEEDKCVSQVLFVPIEDG
4548 PF01101
(HMG14_17)
 click to view
Estimated TM-score=0.52;
hard target.		 >HMG14 and HMG17 (Length=96)
MPKRKVSSAEGAAKEEPKRRSARLSAKPAPAKVETKPKKAAGKDKSSDKKVQTKGKRGAKGKQAEVANQETKEDLPAENG
ETKNEESPASDEAGEK
4549 PF17822
(DUF5584)
 click to view
Estimated TM-score=0.51;
easy target.		 >Family of unknown function (DUF5584) (Length=230)
MAKTRGYCVQCWMQIYHYFVGLYRRLQKFWNVTVKHLFMKKKEEEDISSAESIFHKEKIVVLGHLLKNESLAIEKRAQAA
YRIGLLAFTGGPTAGKFAAEYMKEVAHLLKGHKMPPKVKVLLLQSVACWCYLNPVSQKRAKHLKLIPILTEIFEDKLDST
IKSEINSSLLVKFWTCYVLSVMTCNNLSCIKELKDCHPLKYHLQILANENWSGWPENFAEVLYFLIGFHR
4550 PF17821
(DUF5583)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Family of unknown function (DUF5583) (Length=131)
MVRMSRPLFLDWAWRPLCSPSQSLPLTYGPEGWILQWKGTCRQQTALHCPFDFPQAPLRGRHTLSQVPNKGHEKASAVQL
PEKQGTDQSRRGPTSAVTKARTSYPESETFIVYLCSYFWNSSKGVYMSGKD
4551 PF17692
(DUF5538)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Family of unknown function (DUF5538) (Length=128)
MGLKVGFQGGGSFRKDALWLEGGVSARWARAPHSAPLRPPRELHAAPPSATPTQTVMRPAGFPRRTRLMVRSAPPTQRPP
TGSGCVSGLWRKGLGLRPQTLLRVGGVVLSSAPALRPRLGPGLRPRTS
4552 PF17636
(UL21a)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Viral Unique Long protein 21a (Length=123)
MGGSPVPQLTTVTQGLMPSVRMDFRARRPLRRLAFYAPRARRRLFQNHIHPEQRRVLVGEGDEEMLPDLPMEIDIVIDRP
PQQPLPNPLVLLLDDVPPHVPGFAPYRVPRPHPMIPEEHWDQF
4553 PF17633
(DUF5514)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Family of unknown function (DUF5514) (Length=142)
MEKKVYYSIVSSTRFSRNEENRTIIEDNIKKGENHFLIRNDDYGECFEVDFEKNITEEENENWILEAVIDFAKKYRITEF
ELWKKHEGDSTYDKGFGIVIEGSMDNPILKFKEVYSGSLDDWNITWGKGKQTYEKIYFKLAL
4554 PF17632
(DUF5513)
 click to view
Estimated TM-score=0.51;
hard target.		 >Family of unknown function (DUF5513) (Length=91)
MLLSELKPNHDYAKEGKYLILSLRKKKGVRKDKFIEIPITWFDYNFGEKVEWLIVREYQPSVNGKEKYTNCKLENIHAQV
SVVNVKGERMK
4555 PF17601
(DUF5497)
 click to view
Estimated TM-score=0.51;
hard target.		 >Family of unknown function (DUF5497) (Length=89)
MMERTVTRWHLVSDNELFKIGEVAQRLNYYLQEYANLEMQIEEEIKYIEVDDGEEINTIKTFLLNSMSTSEQRDLYALAL
KLNSLLINK
4556 PF17598
(DUF5494)
 click to view
Estimated TM-score=0.51;
hard target.		 >Family of unknown function (DUF5494) (Length=84)
MRWGRRDDRDTGKILRNRSRNRFNIYHYVSTVKKVKETERELLRLTQTWKAIRLISYNSVGISINRLTSRLIHKLHELLN
GLIS
4557 PF17592
(DUF5489)
 click to view
Estimated TM-score=0.51;
hard target.		 >Family of unknown function (DUF5489) (Length=78)
MTDAISLALQTGLGPVVGVIIILAMMGLTYKIAGKIPAIITGIASAFVLMFMDFLPLFWGIAIIFGLIAGMVVTRDGD
4558 PF17586
(DUF5485)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Family of unknown function (DUF5485) (Length=56)
MYFMSCFLSALETSNTLAVRCMTVKMNAVDAKLYTPRFIFCATSHFVRHSMLFTLS
4559 PF17571
(DUF5477)
 click to view
Estimated TM-score=0.51;
hard target.		 >Family of unknown function (DUF5477) (Length=77)
MGTQPLSGLLCTQGHVKRTSITHSVLLLCYALSTMRTLRHLLGLQQTQCALTVMTCASVSWNTVRLALRYSSCLTLT
4560 PF17501
(Viral_RdRp_C)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Viral RNA-directed RNA polymerase (Length=101)
QLNDAKQTRANPGTSRPRKNRGRSSQGYEVPGRTCERASGPRQSARLSKQDGRDSKSNGNVTIGKTKCSELPRGKSPRGG
KTNARRAPPPTGTKPAVTNNR
4561 PF17430
(YqgC)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Uncharacterized YqgC-like (Length=51)
MGITSAGMQSRDAECGEHIFTRTVRQVKQQTTVHYFVSPPRPPVKTNPQAK
4562 PF17379
(DUF5400)
 click to view
Estimated TM-score=0.51;
hard target.		 >Family of unknown function (DUF5400) (Length=100)
LVSLSVIFGSMLSGFATFRMTGMRLMPHFASLMIAFILTLASLFVDNNIVFYSAIAFQIIAPLTICGTICNILKTQFQNT
GIYSSHLALMGMLFVLAIGN
4563 PF17370
(DUF5392)
 click to view
Estimated TM-score=0.51;
hard target.		 >Family of unknown function (DUF5392) (Length=139)
MSEMPGYIKRELDQLQEVIGPYMKKISKYSIWTLPLLLVSAFNLIFMVFTGDINGENALAIGLFALMGAIGAALFKEVRI
QQNELRKKSANYMIDRIKNSEIANDYHKKQYIQLIKNQPASKTINHFINFLIEENNRKR
4564 PF17319
(DUF5362)
 click to view
Estimated TM-score=0.51;
hard target.		 >Family of unknown function (DUF5362) (Length=92)
FQAKGWMKLVGVIAIISGALQALSIVGILWAWLPIWTGVLLFQAASAIEAAQRSGSAEGMTEAMNKLKTFFTISGVMVLI
GIILTVLFMLFG
4565 PF17307
(Smim3)
 click to view
Estimated TM-score=0.51;
hard target.		 >Small integral membrane protein 3 (Length=60)
MDAISQVPMEVVLPKHILDIWVIVLIILATIVIMTSLLLCPATAVIIYRMRTHPVLNGAV
4566 PF17265
(DUF5331)
 click to view
Estimated TM-score=0.51;
hard target.		 >Family of unknown function (DUF5331) (Length=110)
IIFEELLKILPDKWLDYYQNNQPWIKSLMDSKDSWRKTPDGGKRPSADIIIGAITVLESQLSVWMYPFCQLSSDGDKLLE
VLGLNFDPEKKQLEKKERELSNSLYPNEDP
4567 PF17162
(DUF5118)
 click to view
Estimated TM-score=0.51;
hard target.		 >Domain of unknown function (DUF5118) (Length=49)
QPYTKVITKDAKSDEGLFTVHQVEDKYFYEIPDSLFNREMLMVTRIAKT
4568 PF17103
(Stealth_CR4)
 click to view
Estimated TM-score=0.51;
hard target.		 >Stealth protein CR4, conserved region 4 (Length=57)
DDIRKNPRKFVCLNDNIDHTHRDAQTVKAVLRDFYESMFPVPSQFELPREYRNRFLH
4569 PF17089
(YjbT)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Uncharacterised protein family (Length=92)
MKRNLIKVVKMKPYFAALMLSVSVLPAYAGPLGTADKADLPQSNVSSPMMAQSLRQPDLQPISTDRKTECFRLYTPDRKP
GVNCVPDGSTGH
4570 PF16959
(Collectrin)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Renal amino acid transporter (Length=154)
AFKVRISLKSAMGDDAYTWNTNEMYLFKSTMAFAMRQYYLEEKGIEMNFMPENINTYSETARISFYFFVMDPTKPGTVIP
KADVEAAIWLSRERINGAFLLNDETLEFVGLQATLAPPKEEKITVWLVVFGVVMGVTVCGGIYLITTGILNRKK
4571 PF16630
(APC_u5)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Unstructured region on APC between 1st and 2nd catenin-bdg motifs (Length=100)
LNSGRQSPSQNERWARPKHIIEDEIKQSEQRQSRSQSTTYPVYTESTDDKHLKFQPHFGQQECVSPYRSRGASGSETNRV
GSNHGINQNVNQSLCQEDDY
4572 PF16626
(Papilin_u7)
 click to view
Estimated TM-score=0.51;
hard target.		 >Linking region between Kunitz_BPTI and I-set on papilin (Length=91)
PEPGASGHHVHTDGSHGGPGGQPEPGWHRTGATVPRLPSPSGGPWWREQEPRPAEAAHTGAFGARPGGQELRPGVPGLGE
DAGRPVPPSYS
4573 PF16600
(Caskin1-CID)
 click to view
Estimated TM-score=0.51;
hard target.		 >Caskin1 CASK-interaction domain (Length=59)
EDIWVLRKPFAGGDRSSLGSTGSVASARSSGSGQSGGSGVHTLHPGSEGVKLLATVLSQ
4574 PF16574
(CEP209_CC5)
 click to view
Estimated TM-score=0.51;
easy target.		 >Coiled-coil region of centrosome protein CE290 (Length=128)
TMIQLQNDKLKILEEVQHAQQERRNAENRALEMELKLKGLEELISALKDTRGAQKVIEWHMKMEELRLQELKLNRELVKQ
KEEMKYLNNIISEYECTISNLEEEIVQQNKFHEERQISWDQREVELQR
4575 PF16406
(DUF5014)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Domain of unknown function (DUF5014) (Length=88)
YTSPEMPFYSEKNAGKFKEWWGNKKALSMKSGTPHPNESLAAEGWKFVNAMEFHAIDGQCRNAKNSNGVCPVLGFGAQNT
VMVQKFMA
4576 PF16286
(DUF4932)
 click to view
Estimated TM-score=0.51;
hard target.		 >Domain of unknown function (DUF4932) (Length=323)
VKSQVKESFELTSIVFRLAGAEEYINNTIPGYTADIDNYFSKYREHKLISYIKKIREEQGIAYDAVPAATGCIEIKRGKV
IIDPQCDASKISMIDSRWTEESFRTFVRLLNDFYRQTKFKDFYTLHRGLYDIAETRLNTILVDLNAEWFKSMFGEGPENT
IVVASLCNGPGNYAFNGITKGEKRGIVIGCSTDKEGNPAYSRFLITVIVHELLHHYTNPCLAQYWSQIDSASQIIYPHVK
EKMAKLAYGSTNSTMIEWFNNLLTIMYFKDNPNRGFTATHLTAWRQHEGFIWMERSMTFMEHFRNHRNLYSTIKDFMPEI
VSF
4577 PF16230
(DUF4889)
 click to view
Estimated TM-score=0.51;
easy target.		 >Domain of unknown function (DUF4889) (Length=71)
MKDNTTIEKMISEKDESIEKNVKLPSDSDVKVKKGDFVIVYKLADSDKIVKVKKVDHDDVPHGLMMKIHDM
4578 PF16089
(DUF4818)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Domain of unknown function (DUF4818) (Length=117)
GPPITSIIFALGVYTITSNLNFYPASFRKPIASLMGLYEFLVTAFILDFSVACVWTPIDVHIYTTFTRALCKVFISFGFR
DAATWLLHNKSPMAILCCVTAIGFFLTTLHVTRSVDF
4579 PF16069
(DUF4811)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Domain of unknown function (DUF4811) (Length=153)
SLPRIITSFLFAIIIIGSMTAMVLNDREHFGMKKVTEETSSKIYSPSPSKQMPMLLYQNIGTKGTEQVYIYKKTEDQKKP
GHTPVDKTSNVVKDSNNEDAKLVTKTTRWVYKNGAYKFWFGIADNNHKLIKRHNIFYIPKDWQNFSTTQAAKL
4580 PF16039
(DUF4791)
 click to view
Estimated TM-score=0.51;
hard target.		 >Domain of unknown function (DUF4791) (Length=175)
PAEHPFAFTASFVGFCHGCTGIYTRFFDSSCGAEGSEGKCTNRVKKLTSSCMEIITVPLANMDLYRSSKQSSALALGHGL
FIIPLAFDLTFKFFATEGDEGESTAILKDLTVLGNIVSLLFFAVNENNLPAGIMSLSAFFSYSGSMVMEYMLNGTEEKST
LAGYALFFACMSSAL
4581 PF16015
(Promethin)
 click to view
Estimated TM-score=0.51;
hard target.		 >Promethin (Length=105)
SVDRVVPPPSRQKAYDNTMAFASARPILFSFIVSQLLLSFLPLLIFLTFSLSTILFALGAAIVFSLFWIGVALLVLVPAL
LVTSSIAVLVWGWAVGSFVVARWLY
4582 PF16009
(DUF4779)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Domain of unknown function (DUF4779) (Length=160)
ESGGGHKHESHHHEEHGGKGDKGYKSHHHHDKGDSSKHDEEHHSGHHEEHGGKKKGHHDEHEKYGEHHEGEKGHKGGKFG
EKKGHKKGHKTKGYHNKFHKDEYHKEHKFYDDYHKGGHHEKHGDFQGHHEKKEGHHKKGGHHHSGYHEDHHGKKGHHDKG
4583 PF15949
(DUF4757)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Domain of unknown function (DUF4757) (Length=169)
MSARRTSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRKKKAEREEYRKSWSTVTSPLGGERPFRYGPRTPVSDDAESTSMF
DMRCEEEAAVQPHSRARQEQLQLINNQLKEEDDKWQDDLARWKSRRRSVSQDLIKKEEERKKMEKLLAGEDGTSERRKSI
KTYREIVQE
4584 PF15863
(EELM2)
 click to view
Estimated TM-score=0.51;
hard target.		 >Extended EGL-27 and MTA1 homology domain (Length=171)
DYETRINVGPNHQVPHLPDFFLARGDSDCLSTLAEHSLNDGAQSQALGPLLVYSPYLMERSKQQCLAERATKSCITSQKD
LAEFLIKCSKRWKVRPGWQPFSPEFAYKLLHRANYDPERALRMMDDSAFCFQSVCDPPLRKYENKWKRRDKRGTFPSSPY
PPPVVVRGYLN
4585 PF15846
(DUF4720)
 click to view
Estimated TM-score=0.51;
hard target.		 >Domain of unknown function (DUF4720) (Length=96)
FLLPLCVALLPVRQGQGAPLRGEEKWKSLDNPRNRDLFFRTLQAYFLRRGLDLEKFPNAFYINNEKPWPSSFHSDPMASA
FADYEEQKNSFSNYLR
4586 PF15837
(DUF4716)
 click to view
Estimated TM-score=0.51;
hard target.		 >Domain of unknown function (DUF4716) (Length=60)
SFRYTVVLISSMEPCSSTACAWSFWPSITERRDTEAWGLGTGLRREMEKAASEGLIKSVV
4587 PF15758
(HRCT1)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Histidine-rich carboxyl terminus protein 1 (Length=77)
TCLFHGRQDCDVERNRIAAGGNRVRRAQPWPFRRRGHLGIFHHHHHPGHVSHVPNVGLHHHHPRHTPHHLHHHHHPH
4588 PF15637
(Tox-HNH-HHH)
 click to view
Estimated TM-score=0.51;
easy target.		 >HNH/Endo VII superfamily nuclease toxin with a HHH motif (Length=102)
DLLVSMRYNGDYHSSSNSQGWDRNSSYYFENLLHNHPEYFSKKNMIRINNNQSPKVDSQFVKNFPQYKGYENELLVHHHI
GKDGQAVAIPASIHKGSGEIHR
4589 PF15628
(RRM_DME)
 click to view
Estimated TM-score=0.51;
hard target.		 >RRM in Demeter (Length=101)
GTILIPCRTAMRGSFPLNGTYFQVNEVFADHDTSCNPIDVPREWIWNLPRRTVYFGTSVPTIFKGLTTQEIQQCFWRGFV
CVRGFDQRTRAPKPLYARFHF
4590 PF15596
(Imm57)
 click to view
Estimated TM-score=0.51;
hard target.		 >Immunity protein 57 (Length=109)
MADKAILWALISASTKEGRKACSLSYFACKAAEAELGLAYMAANDNKEFLTSLSNIMRYKIDAGLSESYTCYLLSKGKII
RPYLKNLNPLQLAADCIETVNKIKDKNKK
4591 PF15589
(Imm21)
 click to view
Estimated TM-score=0.51;
hard target.		 >Immunity protein 21 (Length=150)
EWVESGGGPLIAVPETVLPFWTGADGEETDSDYDRACEVDGQVGLLPVGDSTALVLGDEPASTAYLPDHGAFVRWCAADS
EDEVLARVPAALDAAEWQPEVSWHVSGPVLLFDAAWPGSASDRAPDRVRVALEPGRYAVRAAEVRPGPET
4592 PF15465
(DUF4634)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Domain of unknown function (DUF4634) (Length=130)
MDVLFVAILAVPLILGQEYEDEERLGEDEYYQVVYYYTVTPSYDDFSADFTIDYSIFESEDRLNRLDKDITEAVETTISL
ETARADHPKPVTVKPVTTEPQSPDLNDAVSSLRSPIPLLLSCAFVQAGMY
4593 PF15407
(Spo7_2_N)
 click to view
Estimated TM-score=0.51;
hard target.		 >Sporulation protein family 7 (Length=63)
HGLEPGSFTAEKLRYASAHHLHMTSRRFFIGPIPEGWLQHHRKHWYRTRLKFRNYTSRTVTFS
4594 PF15371
(DUF4599)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Domain of unknown function (DUF4599) (Length=88)
RAKRRRKGGTPKGWRCHQTEIEEKTKLISILKSLLGQHDDNTRIRRLLCPDPFCEACNNATAEINRLLLPGALEDSASSV
SPLASTAP
4595 PF15337
(Vasculin)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Vascular protein family Vasculin-like 1 (Length=93)
EALSHSLEAEHRLLKAMGWQEYPENDENCLPLTEDELREFRMKTEQLRRNGFGKNGFLQSRSCSLFSPWRSTCKAELEDS
DTETSSSETSDDD
4596 PF15271
(BBP1_N)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Spindle pole body component BBP1, Mps2-binding protein (Length=142)
GGYAGLYRWTMDALFGSRVSPSRKYKEFAQDDTNYKREGRRRVRSPESTIMRSNSWSGLDSGFYRRNDLLPPSIEEDMEV
PRPIESSNSLLNSSRVYRRPEEQPTDTFAARRRRLGDDGEDHSIVLQSPQQDDPLISKLFQK
4597 PF15228
(DAP)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Death-associated protein (Length=94)
AGHPPAVKAGGMRIVQKHPHAPDTKEDKDKDKDDQEWESSTSPPKPTVFISGVIARGDKDFPPAAAQVAHQKPHPSVEKL
PPPHVNQYIHQPRK
4598 PF15205
(PLAC9)
 click to view
Estimated TM-score=0.51;
hard target.		 >Placenta-specific protein 9 (Length=74)
AEPFVPSHGDPAWNTGCDRHMAVHDRLDVIEETVEKTVEHLEAEVKGLLGQLEELAWNLPPGPFSPTPDLLGDD
4599 PF15182
(OTOS)
 click to view
Estimated TM-score=0.51;
hard target.		 >Otospiralin (Length=68)
ARPIQEGDDPFAEPPAMPYWPFSTTDFWSYVEYFRTLGAYQQINDMARTFFSHYPLGNTLGYNVPYHE
4600 PF15162
(DUF4580)
 click to view
Estimated TM-score=0.51;
easy target.		 >Domain of unknown function (DUF4580) (Length=160)
RWITTVIMSTALQNHEVSTILQSQQHRVRYSDSVETGSVIFSLSGVAFILADTQDLLRTGEEQFLDRIQKFINIHRNSFL
VLSAALHGPEEWNIMFRIQRRFLGSNLRIIPVHNTAETVKFMLTIAKITSKPCADDIRYKMAVAKAHIIEKSPVWEMLQQ

Search by Pfam ID:
Go to page (83 pages in total): [First page] << < 41 42 43 44 45 46 47 48 49 50 51 > >> [Last page] [All entries in one page].

Bulk download:

[Back to server]

[an error occurred while processing this directive]

yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218