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Modeling of Pfam protein domain faimilies by C-I-TASSER (Page 48)

Search by Pfam ID:

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# Pfam ID C-I-TASSER models ranked
by estimated TM-score
(click to view)		 Full name and representative sequence
4701 PF07530
(PRE_C2HC)
 click to view
Estimated TM-score=0.51;
easy target.		 >Associated with zinc fingers (Length=70)
CSWIVEELLKLGFQARFVRNMTNPATGGPMRMFEVEIVMAKDGSHDKILSLKQIGGQRVDIERKNRTREP
4702 PF07458
(SPAN-X)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Sperm protein associated with nucleus, mapped to X chromosome (Length=94)
MEQPTSSTNGEKRKSPCESNNNKNDEMQETPNRDLAPEPSLKKMKTSEYPRVLVFCYRKVKKINSNQLENDQSRENSINP
VQEEEDEDLDSAEG
4703 PF07432
(Hc1)
 click to view
Estimated TM-score=0.51;
hard target.		 >Histone H1-like protein Hc1 (Length=123)
ALKETTKNMKHLLVQIAEDLEKADGGNKAASQRVRTGTVKLEKIAKLYRKESIQSEKGTKGRAKKPAAKAAKPKAAAKHA
APKHAAAKAPKAKATKAHAKPASKAKKTTAKARPMSFKRPTAK
4704 PF07384
(DUF1497)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF1497) (Length=59)
MGYYDTRNEARRISKLASQNISSEQTKKEFELDRQSKFNQEMQAEFHEKIKKLGEKNGS
4705 PF07277
(SapC)
 click to view
Estimated TM-score=0.51;
very hard target.		 >SapC (Length=220)
LQTALHSNLKLKADNTFAFASGIHVAAIMANEFYRAASTYPIVFIEDAGKDGFMPVVLLGLTENENLFVNAEGRWEATYV
PAILRRYPFALAKTGEEGQYTVCIDEESGFFTEEEGQALFNEDGQPGEVLEKVKTYLAQLQQMEQLTRQFCEVLKEHNLL
APLNMRVQKDNAVQNITGAYAVNDERLSHLSDETFLELRKKNFLPLIYSHLVSVTQIERL
4706 PF07215
(DUF1419)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Protein of unknown function (DUF1419) (Length=110)
TLSPIRKVFQGVADRRQMFRMFDRHAQRPNRWEGDDSALYCGEWFEIDEREHNYMFEILPPLWMRGDMFAMREFLTGNIT
SIFFTLKIDDRMRYFHAYCDLSDKGSPERM
4707 PF07203
(DUF1412)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Protein of unknown function (DUF1412) (Length=50)
GLIRQRRQSYWNSNGVVHNVVTDNMAGGPTSLGWAQVPHRLSPMFSPIFG
4708 PF07174
(FAP)
 click to view
Estimated TM-score=0.51;
easy target.		 >Fibronectin-attachment protein (FAP) (Length=293)
MDQQDAVRVHRKGLSKSLAIAALTGATAVALALPSIAQAQPAPTPAPPPPPPSGNTFLQGPPPPPGAPAPPPPPADPNAP
PPPPPADPNAPPPPPADPNAPPAPPPVEAGRVDNAAGGLSFVVPAGWKVSDSTQLSYGQALLTKIAPEGAEPPNDTSVLL
GRLDLKLFAGAETDNTKAAQRLASDMGEFFMPFPGTRINQKTVPLDAAGMPGVASYYEVKFTDANKPTGQIWAGVVGEPV
EPGTPRGQRTPQRWFVVWLGTATNPIPQEEAVTLANSIRPYTAPAAPPPADPN
4709 PF07029
(CryBP1)
 click to view
Estimated TM-score=0.51;
very hard target.		 >CryBP1 protein (Length=164)
QTDTEVEFTCVTCVPESFAVDIESLEEIRFIFNTDKLYCCLDKTTEECNIPGIGDIEVDVCVVKIVGAIEYILNAYPAVR
GDKYGRGEGDIEVIPDREANVCCEGTTFVDNVVGAFAVDDPELIEDPCEELDFCDIEGVLTDISIITDEESDKQCIKFEG
RFEL
4710 PF06834
(TraU)
 click to view
Estimated TM-score=0.51;
very hard target.		 >TraU protein (Length=289)
XCIFPLSLGSIKVSQGKVPDTANPSMPIQICPAPPPLFRRIGLAIGYWEPMALTDVTRSPGCMVNLGFSLPAFGKTAQGT
AKKDEKQVNGAFYHVHWYKYPLTYWLNIITSLGCLEGGDLDIAYLSEIDPTWTDSSLTTILNPEAVIFANPIAQGACAAD
AIASAFNMPLDVLFWCAGSQGSMYPFNGWVSNESSPLQSSLLVSERMAFKLHRQGMIMETIGKNNAVCNEYPSPILPKER
WRYQMVNMYPDSGQCHPFGRSVTRWETGKNPPNTKKNFGYLMWRKRNCV
4711 PF06755
(CbtA_toxin)
 click to view
Estimated TM-score=0.51;
hard target.		 >CbtA_toxin of type IV toxin-antitoxin system (Length=112)
MKTLSDTHVREVSRCPSPVTIWQTLLIRLLDQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPGF
STCPRSQLINSIDILRARRATGLMTRDNYRTV
4712 PF06727
(DUF1207)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF1207) (Length=337)
QFKVDVPALIVRNGTITIPADKISARDRAKVVQILSEIPGVSRVEMGEHAVQRSVATASVPDKEILPKKSTPAIGSTMLA
TGLLPEGHLFKPLLADPRWAHFSAAYRNYVGNNIDGNNNGSVSFGETIPFYRANIGQSIVQWETGIQAAVFSDFNLGASS
SDLINTDFIASAYSSMRANNASAFARIYHQSSHLGDEFLLRKLTNLERVNLSYEGIDLKLSYELPYGIRVYGGGGGIFHK
EPSTIKPWSVQYGLEFRSPWRIESAAMRPIMAVDVKNHEQNNWNADISARAGVQFDNFQAFNRKFQVLAEYFNGNSPTGQ
FFREKVEYIGLGLHYHF
4713 PF06587
(DUF1137)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Protein of unknown function (DUF1137) (Length=117)
EKAPPFLKIKKLGVHKQITSPDRQFFNCHVDKSCMELHLSDANYACKEVLSKLSGHIHTQDLDKLMTFQGNGGLLNYQDC
SLNIYDCRFHVDPIHPDPQAPEERAVGGMKTLSLSLL
4714 PF06547
(DUF1117)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Protein of unknown function (DUF1117) (Length=112)
VGLTIWRLPGGGFAVGRFSGGRRAGERELPVVYTEMDGGFNNSGAPRRISWASRRSRSRESGGSLGRAFRNIFSFLGRFR
SSSSSSSRSTSEPGSITRSHSHSSSVFSRYVR
4715 PF06465
(DUF1087)
 click to view
Estimated TM-score=0.51;
hard target.		 >Domain of Unknown Function (DUF1087) (Length=61)
EDAEEEPQREIIKQEENVDPDYWEKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDTSQED
4716 PF06277
(EutA)
 click to view
Estimated TM-score=0.51;
easy target.		 >Ethanolamine utilisation protein EutA (Length=475)
EELLSVGIDIGTSTTQLIFSKLIVENEASAFTVPRISIVDKEIIYRSEVYFTPLISNTEIDGRKIKEIIEEEYKKAGINK
DDIQTGAVIITGETARKENANDVLHTLSGFAGDFVVATAGPDLESIIAGKGAGAHIYSKEHSTSVVNIDIGGGTSNLALF
LRGEVKDTGCLDVGGRLIKINPNTREIIYISPKIEKIIKEKNLGLEIGTKATVENIKPVVNMMVAWLEESVGLRPKDEYF
DYIVTNKSIALENEIKCISFSGGVADYIYYEGEIQDYFKYGDIGIILGQAIKNSDLCKKLKVVKSIETIRATVVGAGSHT
TEISGSTITYTKDSFPIKNLPILKLSLEDESQGAYELETALKKKIEWFRLENDFQKIAIAINGKKNPSFKEIQEYAKGLV
NGMKDLIEKEGQLIVVVENDMAKVLGQAIYSLLNFQKEIICIDGIKVENGDYIDLGTPIADGKVLPVVIKTLVFN
4717 PF06266
(HrpF)
 click to view
Estimated TM-score=0.51;
easy target.		 >HrpF protein (Length=75)
MSSSSPIQRRLDGAFVDAQSRLDEMALNVSEGEVSAADSYAFYEASMDYSNANWAAGQMLSVKHGLAKAIINDFN
4718 PF05883
(Baculo_RING)
 click to view
Estimated TM-score=0.51;
hard target.		 >Baculovirus U-box/Ring-like domain (Length=134)
MFCTFCLKDRNYYMFKLFKDYWPTCATECQICLEKIDDNGGIVAMPDTGLLNLEKMFHEQCIQRWRREHTRDPFNRVIKY
YFNFPPKTLEECNVMLRETKGFIGDHEIDRVYKRVYQRVTQEDALDIELDFRHF
4719 PF05824
(Pro-MCH)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Pro-melanin-concentrating hormone (Pro-MCH) (Length=84)
NIGSKHNFISHGSPLNLGIKQLPYLALKGSMAFPADTEIQNIESIQERRETGDEENSAKFPIGRRDFDMLRCMLGRVYRP
CWQV
4720 PF05766
(NinG)
 click to view
Estimated TM-score=0.51;
hard target.		 >Bacteriophage Lambda NinG protein (Length=196)
MAKPARRRCKNDECREWFHPAFANQWWCSPECGTKIALERRSKERKKAEKAAEKKRRREEQKQKDKLKIRKLALKPRSYW
IKQAQQAVNAFIRERDRDLPCISCGTLTSAQWDAGHYRTTAAAPQLRFNERNIHKQCVVCNQHKSGNLVPYRVELISRIG
QEAVDEIESNHNRHRWTIEECKAIKAEYQQKLKDLR
4721 PF05650
(DUF802)
 click to view
Estimated TM-score=0.51;
hard target.		 >Domain of unknown function (DUF802) (Length=53)
LSARLEQTSAAVAGNWSHALAEQQQTNQILNQDLRATLEGFSAGFDTRAGALL
4722 PF05561
(DUF764)
 click to view
Estimated TM-score=0.51;
hard target.		 >Borrelia burgdorferi protein of unknown function (DUF764) (Length=180)
MIFTLDMVLNHLTQIFKGFKAYATENNFECDIINTYNHPYLSKITAASSNIIALKFDGTENLFDHNSRAGAFYENALEFS
LNFQIYIIAIVLNAQDFDANSRMLMLYGMLSNFLHNKAHKYTLESQSQPEYISKVNFYIYPISNMQTVGLINLGTKYSNH
AYSASIAFNASVKAIEILKE
4723 PF05533
(Peptidase_C42)
 click to view
Estimated TM-score=0.51;
hard target.		 >Beet yellows virus-type papain-like endopeptidase C42 (Length=86)
YPDGRCYLAHMRYLCAFYCRPFRESDYALGMWPTVARLRACVEKNFGVEACGIALRGYYTSRNVYHCDYDSAYVKYFRNL
SGRIGG
4724 PF05384
(DegS)
 click to view
Estimated TM-score=0.51;
easy target.		 >Sensor protein DegS (Length=159)
DSILEKMVHTVDHSKEEIFRIGEQSRNEFVTLTDELKDIKERVGTIIDEVDRLENHSRFARKRLSEVSSHFKKYSEEEIR
NAYEKAHDLQMQLTVIRQEEKQLRERRDELERRLVGLNETIERADHLVGQISVVLNYLNSDFKMVGEMIEDAKQKQAFG
4725 PF05377
(FlaC_arch)
 click to view
Estimated TM-score=0.51;
easy target.		 >Flagella accessory protein C (FlaC) (Length=55)
RINSLEKKLSKFEMSFNMMERENKDIKDTVQKIDQSVIELLSLYEIVSNQVNPFV
4726 PF05288
(Pox_A3L)
 click to view
Estimated TM-score=0.51;
hard target.		 >Poxvirus A3L Protein (Length=70)
KYHINLNPPRRCSRCLANLFEFLSEDSETIKMVLESQPNKLRILKEFLSACRNKEFIYKILDDEIKRVLT
4727 PF05226
(CHASE2)
 click to view
Estimated TM-score=0.51;
very hard target.		 >CHASE2 domain (Length=288)
LLVGWLALTPTADRADNLFYDGLIRVQDGPADPSIVIIAIDDRSLNALGRWPWPRTVHAALVDRLNQAQPRAVAYDVLFT
EPEAGDPALAAALARARDVHLPLLVEAPGQNGAAWQVSEPASDLARAAASLGHVNMIVDGDGVIRRVPLYMQAGARSWPQ
LVLPLAETAGAAPPAPRPDADSGEALIAAAPEAIAYRGPPGRFRTLSFVDVLNGEVPADFLKDRLVLVGATAPGMGDRYA
TPAAPHGELSPGVEIQAALLQTLLEGGGPRTLSPPWVLGLSLLPLALL
4728 PF05083
(LST1)
 click to view
Estimated TM-score=0.51;
hard target.		 >LST-1 protein (Length=79)
LGGLLLLAVVILSACLCRFRQRVTRLERNWAQFRDQELHYASLQRLPGPSGEGPDLGDREEGTKADPSSDYACIAKNKP
4729 PF05077
(DUF678)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF678) (Length=74)
MEDTGGAKRIRKRKPKTTIQDNDDCVTCSSCYSKLIKVSDITKVSLDLYKVSGKGNTLSCAACGSELRLLNDFV
4730 PF04932
(Wzy_C)
 click to view
Estimated TM-score=0.51;
very hard target.		 >O-Antigen ligase (Length=159)
ASIIFAGLVASIARSNWISFVVYSAVLFIYCLKKKKYIKRYMMCLGIFVVVFLLLNLLTDSSIASRLNSIGLDAKKITMK
DNDTAGSSRLYIWKRGITFIPEHPLLGSGPDTFGVVFLEKYFDELKYMQDITGGIVDKAHNEYLQLAVTSGIPALLIYL
4731 PF04757
(Pex2_Pex12)
 click to view
Estimated TM-score=0.51;
hard target.		 >Pex2 / Pex12 amino terminal region (Length=237)
QDSLMGAVRPALQHAVKVLAESNPSRYGPLWRWFDEIYTVLDLLLQHHFLSRTSASFSENFYGLKRVVTSGLQRSAHLGL
HSRQRWNSLLLLVLVPYLHAKLEKVLARQREEDDFSIQLPQTRFQRMYRAFLAAYPFVSTVWEGWTFCQQLLYVFGRTWR
HSPLLWLAGVRLVHLTAHDILNMDLKPTTTSLATSQRFGEKLQQMLSTVVGGIAVSLSTSLSLGVFFLQFLEWWYSS
4732 PF04713
(Pox_I5)
 click to view
Estimated TM-score=0.51;
hard target.		 >Poxvirus protein I5 (Length=74)
SAKEIFSAISLTLLALLMIISGGALAFKSLAPHRIVSMRSATFNRVVSILEYLAILIFIPGTIALYSAYIKKLF
4733 PF04668
(Tsg)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Twisted gastrulation (Tsg) protein conserved region (Length=131)
LSKKSHVEDFSEPVPGLFQALTAEPDPHERWLTFTFPVDFDVSLFTPKHEKEMKYHMQTVEQEERTLKPNVMTVNCTVAY
MAQCNSWNKCRASCQSMGATSYRWFHDGCCECIGDTCINYGINESRCVHCP
4734 PF04623
(Adeno_E1B_55K_N)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Adenovirus E1B protein N-terminus (Length=68)
MDPPNSLQQGIRFGFHSSSFVENMEGSQDEDNLRLLASAASGSSRDTETPTDHASGSAGGAAGGQSES
4735 PF04610
(TrbL)
 click to view
Estimated TM-score=0.51;
hard target.		 >TrbL/VirB6 plasmid conjugal transfer protein (Length=218)
IVIDITLAGLFWAWGADEDILQRLVKKTLYIGFFAFIITNFTKLSGIIFNSFAGLGLKAGGSSISTADFLRPGRLAQVGL
DAGQPLLDSASQMMGFTSFFSNFVQIAVLMVSWLLVLIAFFILAVQLFVTLIEFKLTTLAGFILIPFALFNKTAFLAEKV
LGNVVASGVKVMVLAVIVGIGTGLFSQFTTAYAGGQPTIEQALSVVLAALAMLGLGIF
4736 PF04579
(Keratin_matx)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Keratin, high-sulphur matrix protein (Length=96)
CCVARCCSVPTGPATTICSSDKSCRCGVCLPSTCPHEISLLQPTCCDPCPPPCCQPEVYVPTCWLLNSCHPTPGLSGINL
TTFVQPGCESPWKEEC
4737 PF04571
(Lipin_N)
 click to view
Estimated TM-score=0.51;
hard target.		 >lipin, N-terminal conserved region (Length=102)
MNYVYYIFNNVKYLYNSMNSATLSGAIDVIVVEQPDGTMLSTPFHVRFGKYGVFNYDDKYVDIQINNEEIDLKMKLGENG
VAFFVEKPSDETELPSHLETSP
4738 PF04570
(zf-FLZ)
 click to view
Estimated TM-score=0.51;
easy target.		 >zinc-finger of the FCS-type, C2-C2 (Length=51)
FAAAVETAPFLRSCGLCKHSLNLGRDIFMYRGEIAFCSLECRQQLMNQEDR
4739 PF04569
(DUF591)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Protein of unknown function (Length=51)
GRTRGSEPPDRIRRKEARGGGLRRRTLATRKRGNGGGATRIKFKVVGVSPG
4740 PF04528
(Adeno_E4_34)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Adenovirus early E4 34 kDa protein conserved region (Length=145)
LASWFRMVVDGAMFNQRFIWYREVVNYNMPKEVMFMSSVFMRGRHLIYLRLWYDGHVGSVVPAMSFGYSALHCGILNNIV
VLCCSYCADLSEIRVRCCARRTRRLMLRAVRIIAEETTAMLYSCRTERRRQQFIRALLQHHRPIL
4741 PF04517
(Microvir_lysis)
 click to view
Estimated TM-score=0.51;
hard target.		 >Microvirus lysis protein (E), C terminus (Length=42)
RPVSSWKALNLRKTLLMASSVRLKPLNCSRLPCVYAQETLTF
4742 PF04431
(Pec_lyase_N)
 click to view
Estimated TM-score=0.51;
hard target.		 >Pectate lyase, N terminus (Length=53)
HIADFDEEWQKRAEEARKVALEAYQPNPEDVIDHFNNQVQGALNGTNSTRRNL
4743 PF04393
(DUF535)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Protein of unknown function (DUF535) (Length=278)
WENPAYRRKFMLRSLATPFATRRWLSVLARQPMLDALLHAQPGLPCRLHRPWLSVNVSRKAALAALEYHYQHIERLLPDT
LMQGHLTRQGSTLATLSGKNDAQYRLDLAAIADLDKEGETTVIFRDANGVVLAEMTFTLCEVDGQSALFIGGLQGAKAWV
EHDQIQLATKACHGLFPKRLLLEAVCLLAQHFGVSQILAVSNETHIYRSWRYAKKKKDKLHADYDSFWESLGGEKDARGL
YHMPLQITRKSLEEIASKKRAEYRRRYELLENMTAQIA
4744 PF04380
(BMFP)
 click to view
Estimated TM-score=0.51;
hard target.		 >Membrane fusogenic activity (Length=75)
MNKPNFFDDIQAKINQAIENSPAKDIEKNVKAMLGQGFSKLDLVTREEFDVQAQVLANTREKLEALEARVTELEA
4745 PF04363
(DUF496)
 click to view
Estimated TM-score=0.51;
easy target.		 >Protein of unknown function (DUF496) (Length=92)
FQDVLEFVRLFRRKNKLQREIVDNEKKIRDNQKRVLLLDNLSDYIKPGMSIEEIQAIIANMRGDYEDRVDDYIIKNADLS
KERREISKKLKA
4746 PF04347
(FliO)
 click to view
Estimated TM-score=0.51;
hard target.		 >Flagellar biosynthesis protein, FliO (Length=84)
WLVRRLGLQNRQGGRLLKVVSSLMVGQRERVVLVEIGDTWLLLGVGAGQVNTLHTMAAQHAPDASPKVDDTDPDTFANRL
RQSL
4747 PF04284
(DUF441)
 click to view
Estimated TM-score=0.51;
hard target.		 >Protein of unknown function (DUF441) (Length=140)
LFLLLLLIIGYIANNQSLMIAVSFLLIVKLIGLDTKIFPSLQKNGINWGVTVITIAVLVPIATGEIGFKQLLDSLRSPYA
WIALVSGISVAIIAKQGLSLLANDPHITTALVFGTILAVSFFKGVAVGPLIGAGIAYLLM
4748 PF04276
(DUF443)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Protein of unknown function (DUF443) (Length=205)
NLRYRILEINGEEYVLDFGNSIWKIIFPFLHWVLPNPVYKIDNHEIIEKLEVPQENHPKKISTGTGALGGLVGGVFLANL
LRPLANVFNIPSTSLVNLIITIIVLIIALSVFVYVNRRHEKNLTAIVDYTHYPRKKIWIKPPTLKFFFNICFAYLFFMAL
TVVPLMGFIETGDMFIFVPGVVFLFVSFMITYMTIPPGNTTVRFK
4749 PF04194
(PDCD2_C)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Programmed cell death protein 2, C-terminal putative domain (Length=172)
FKSYYLSVIEEPPEVTSVDVHVEDLIRKYEQDEGKQLDELFKESCTPGKPKHGEHYEKTELKHGDKMFHKFLKRLQRCPE
QCIRYDRNGDPLLVSVMDSSLTIPKCPYCGCQRIFELQLLPSLIPWLKTENGSDVEIDYGTVMIYTCQNNCWPPSSDPNC
TLTVMEEFIMVQ
4750 PF03856
(SUN)
 click to view
Estimated TM-score=0.51;
hard target.		 >Beta-glucosidase (SUN family) (Length=243)
DGTISCSDFPSGQGAVSLDWLGLGGWASIMDMNGNTATSCQDGYYCSYACSPGYAKTQWPSEQPSDGRSVGGLYCKNGKL
YRSNTDTNSLCVEGQGSAQAVNKVSGSIAICGTDYPGSENMVVPTVVGAGSSQPINVIKEDSYYQWQGKKTSAQYYVNNA
GVSVEDGCIWGTEGSGVGNWAPVVLGAGYTDGITYLSIIPNPNNKEAPNFNIKIVATDGSTVNGACSYENGVYSGSGSDG
CTV
4751 PF03529
(TF_Otx)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Otx1 transcription factor (Length=90)
AVAPLPEPGPPSNASCMQRSVSGSAAAATSYPMSYNQTPGYGQGYPAPSSSYFSGVDCGSYLAPMHSHHHHPHQLSPMTA
STMSGHPHHH
4752 PF03516
(Filaggrin)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Filaggrin (Length=55)
GRSRSSTKSRQQSHQHNSADHPRHSGTGRGRSTIESGAGSHRGSSVGQASDSEGQ
4753 PF03511
(Fanconi_A)
 click to view
Estimated TM-score=0.51;
hard target.		 >Fanconi anaemia group A protein (Length=62)
EELLVVLFFFSLMGLLSSHLTPHAVDSLKAVDICAEILRCLDKRKVSWLVLFQLTDTDGGLG
4754 PF03478
(DUF295)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Protein of unknown function (DUF295) (Length=56)
RRMKSLEGQALFVGTHCSKSLHAAECVGAQDDCIYFMCDYSQTTADPLHDAGVYNM
4755 PF03112
(DUF244)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Uncharacterized protein family (ORF7) DUF (Length=161)
LEIINLKKDIYSNYREEYLMAHNFNEDTFIKLVEDLVERSDFYSSGVEFDWAREFIEYVDCADLEIKDNQSAENLAYDLM
EIDSLQKELNRIQNENKKREKPIKDRLKMLIYNITNTYPLIEQLNYKFGEFVFTLDPKKRAISDRLKGLLPTSGTVFFPS
N
4756 PF03092
(BT1)
 click to view
Estimated TM-score=0.51;
easy target.		 >BT1 family (Length=576)
RGVADRILTGQTYAMMIDRYGIDVARYQRLSTIATMGWSIKAFTAMLCDGFAFLGYTKRWYMFISCVGGGAFALIYGLLP
AKEASADVAAAFIFLSTWGKANVDILSEGHYSRLMRQNPKPGPSMVSWIWFWIMVGAIIATVMNGPLADAGKPQISIFVS
AALQLITCVFYLFNWYGEKKNRVLRSEDALFILEETRKERDRFRLPAHDEPVTGVPQHGGAAKGKRSPQRSHSDEDVEGA
VRDALNDGQRDNGELVQDVYDDAYDDGEEVAEGEVYYGKPPVPCLFGLFEANTEVISKNWKIFVYSVVMTCAVIAMLCCN
ILADTLGLLIACVVVSTICCATSFWALPLVIAKANVFCYLQMAVYIRATSPLYAFYLNSNECQGDYPNFTYTFYNTVAGV
IGNLAGLVGVTLFNFLFAKHNYQVTFIVTTIMQVLAALFDIIMVKRWNKRIGIPDHAMYIWGDAVVAQIVYMLGFMPLVV
MLSRLCPRGSESVVYALMAGFANLGQTTSSSLAAIIMEYGWPIFSDNDPCNYDNLPLLLFVTSVCTPLLVIPLSYLLPMA
RIIDDVDIDGKVVRQK
4757 PF03004
(Transposase_24)
 click to view
Estimated TM-score=0.51;
hard target.		 >Plant transposase (Ptta/En/Spm family) (Length=149)
DSHIWKAMCEYWDTEEAIARSKIYSKARLSDRNGLGPHIHLSGPKSYQNIKHELEKELGRRVTVGEVFIKTHTKPDGTYV
DKKAEQIVKNYEKKLQEKLSEMEAETSNVSDGESRPRELTIEDHTVIFLEVTETDTRGNYYGVGSLKDN
4758 PF02713
(DUF220)
 click to view
Estimated TM-score=0.51;
hard target.		 >Domain of unknown function DUF220 (Length=75)
SGSIPVHLTFNESRKDFSTLYMIPKKNVMFMKTFYGKWQIEPWYVDNMRFCKPRLPKNREEYRQCTGGKGLIGSR
4759 PF02701
(zf-Dof)
 click to view
Estimated TM-score=0.51;
hard target.		 >Dof domain, zinc finger (Length=57)
QALKCPRCDSLNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGVLRNVPVGGGCRKSKR
4760 PF02496
(ABA_WDS)
 click to view
Estimated TM-score=0.51;
hard target.		 >ABA/WDS induced protein (Length=78)
DYKEDEKHRKHLERFGKLGVDVVGAYAMHDEYGEQKDLDHAHIHKVKAEIGATPTLGVEGFTFHEYHENKQAKQEDEE
4761 PF02468
(PsbN)
 click to view
Estimated TM-score=0.51;
easy target.		 >Photosystem II reaction centre N protein (psbN) (Length=43)
MEPATVLSISIAVMVVAITGFSVYTAFGPPSKELADPFEDHED
4762 PF02444
(HEV_ORF1)
 click to view
Estimated TM-score=0.51;
very hard target.		 >Hepatitis E virus ORF-2 (Putative capsid protein) (Length=114)
MGSRPCALGLFCCCSSCFCLCCPRHRPVSRLAAAVGGAAAVPAVVSGVTGLILSPSQSPIFIQPTPSPPMSPLRPGLDLV
FANPPDHSAPLGVTRPSAPPLPHVVDLPQLGPRR
4763 PF02194
(PXA)
 click to view
Estimated TM-score=0.51;
very hard target.		 >PXA domain (Length=184)
SAKVSAALNQVLSYIIRDFVNSWYLSISKNPAFSNEVDKALRHALLGIKDRLTSLDLAETLTTRLVPILTAHFRDFSDAE
RSVRGKKLNRSVTESEELDLAIASKYRDGKLHPAATLSFSDTKTAQQDYLRKMVFKILPKVLPENLLASRAVATIIREIV
ACAVLFPVMQMLSDPDTWNQLMEN
4764 PF01524
(Gemini_V2)
 click to view
Estimated TM-score=0.51;
hard target.		 >Geminivirus V2 protein (Length=78)
MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDLISVIRARNYVEATSRYNHFHARLEGTPPSELRQ
4765 PF18871
(HEPN_Toprim_N)
 click to view
Estimated TM-score=0.50;
very hard target.		 >HEPN/Toprim N-terminal domain 1 (Length=230)
MGTEIQLKLGGLGLTYAKNHRGPDHGALFQPADRQRIRSDQVDYEYCEEEGEDPSPMEWAFARKLKHVVPRLQLLGFTID
LAREAYSNWVVDWKEERESLQDDDDPPIPEPLSFDEFCAFATRQSILDLDDTFLSGDEEWRDRRKPKGRFASDMAIIERI
PIGFDHDDMAWSERSYFGSRVNILHPYLMLQILAGNAANLETDVTWQYGPLVENGYTAAAAFTPSARRTE
4766 PF18857
(LPD38)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Large polyvalent protein associated domain 38 (Length=176)
DPRYQELPQWQKDLFWIIPAKDTLIRIPKPFEVGILFGTSVERMLDWMYKKDPNAFKGYGKTVWDAMVPGWMPTALLPIV
EWTSNYSYFMERNIVPPSQEKLPPKLQYGPNTSAIGKWIGEHAITPWTPQGVSPAKVDNTIRGYTGGLGGLAMTLGDLVA
GEFDKRPSLKWTEYPG
4767 PF18839
(LPD24)
 click to view
Estimated TM-score=0.50;
hard target.		 >Large polyvalent protein associated domain 24 (Length=70)
EVMEQVRIYFKENLPKYTVLKIRKKSYHPDDSHLYMAAAKKDDGTYAVWTCWNQKLKSLNHGHYGLQSKE
4768 PF18812
(PBECR3)
 click to view
Estimated TM-score=0.50;
hard target.		 >phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3 (Length=118)
ASNKELELLKDANFKHPENIRASLDHDAITHILKRHGVNSVNVKNGESPITYEDIANYRYIVNNADAILRTLDNEDKEVI
SAFKQINGYAVVVEQALNKKNELVLKTMYKSNGDYKDN
4769 PF18303
(Saf_2TM)
 click to view
Estimated TM-score=0.50;
very hard target.		 >SAVED-fused 2TM effector domain (Length=153)
WNTLDFVVRSLVSWFVRARHAESWIFRGAVAVLVAIHGANWVFKYSGTIGGESGSIEFGTAGAVPDSILWIITVVCIALM
LGSAMWAWIRYANEQKRLARKKVFVIEGRGLRDDDGSSLKSAVPESITGTRIDYMLDLRQRKDGVIVEPEDLL
4770 PF18296
(MID_MedPIWI)
 click to view
Estimated TM-score=0.50;
hard target.		 >MID domain of medPIWI (Length=250)
RDVAYIVVCPENEALLEGAKTFFRDLSAVYEMCRLGQHKPICKVLRDGIMRVGKTVAQKLAEELVSEWFNQPWGSEESDN
HSRLKLYAQVCRHHLGFSGSVGAQNPSAGASSAERTQGNIGCGGDTEPGQSSSQPSQDGQESVTERERIGIPTEPDSADS
QAYPPAVVIYMVDPFTYTAEEDSTSGNFWLLSLMRCYTEMLDNLPEHMRNSFILQIVPCQYMLQTMKDEQVFYIQYLKSM
AFSVYCQCRR
4771 PF18175
(HU-CCDC81_bac_2)
 click to view
Estimated TM-score=0.50;
easy target.		 >CCDC81-like prokaryotic HU domain 2 (Length=70)
SLLAQSYIEAYDISYPEALQRIEDEVNELTQTLQNEGRYELNNIGILELNEDGNYVFTPCEAGILTPSLY
4772 PF17694
(DUF5540)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Family of unknown function (DUF5540) (Length=78)
TASFQRTKEREEDRHSSDLSTKNNDTPRFCSAGVGKRMQPSPSAGKGGKCCTVHGLTRRIHNAQANLHSPILSAACAD
4773 PF17690
(DUF5537)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Family of unknown function (DUF5537) (Length=160)
MSVLSPEIKCETSKFTRSSFGSCLIFESSWKKAVLETQKIKKEYTTAFGLEELKECIKMPYLPGLQSCQKSVSSTPLEVP
KRLPRADAEVSAVRLKKTKETCSVAPLWEKSKGSGFSDPLTGAPSQYLERLSKIAILEYDTIRQETTTKSKKSKKRDLRD
4774 PF17640
(UL17)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Uncharacterized UL17 (Length=102)
MDHALFTHFVGRPRHCRLEMLILDEQVSKRSWDTTVYHRRRKHLPRRRAPCGPQRPAEIPKRRKKAAVLLFWHDLCWLFR
RLFFPREDSEPLMSDPARSPEE
4775 PF17600
(DUF5496)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Family of unknown function (DUF5496) (Length=87)
MILRFKDTSGVVLFTLPNPSELEVPGPEQPITIYGKKYYTHKMTREYFDNKISTVKTSSDCYYDITVLTEKQYDELFQRG
PSMPGSE
4776 PF17588
(DUF5486)
 click to view
Estimated TM-score=0.50;
hard target.		 >Family of unknown function (DUF5486) (Length=53)
TSEIDYNKIRSSREEMMRRFKEAHDKAKAEGTITYKRIKFKSSNEPLYGVLCG
4777 PF17584
(ComS)
 click to view
Estimated TM-score=0.50;
hard target.		 >Bacillus competence protein S (Length=44)
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWR
4778 PF17522
(DUF5446)
 click to view
Estimated TM-score=0.50;
easy target.		 >Family of unknown function (DUF5446) (Length=72)
MSGYVCKTDILRMLSDIEDELTRAEQSLNHSVNALEAEMRETENDRLSVLEEEIIDLHICINELYQSPEHRY
4779 PF17508
(MccV)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Microcin V bacteriocin (Length=103)
MRELNEHEIKCAAGGQDYGREIAQGAGAAAGTFVAGGGGAIVGPIVAGMVYDWASNKTPDSALSPSGLGSTLKKKPEGLP
SEAWNYAEGRMCNWSPNNLNDVC
4780 PF17504
(DUF5436)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Family of unknown function (DUF5436) (Length=79)
MRRCIHIKEREIHMTDIVDRNVTFILIVVHKYVRYKPHTIANDAHNLVHLAHLIHFIIYFFIIRNVQKKKKTKTEQNIF
4781 PF17471
(GP63)
 click to view
Estimated TM-score=0.50;
hard target.		 >Gene product 63 (Length=73)
MPRKVSPLRQQVLAALIKTRPTAWTQKKVDLRSENPRKPELIEVVHDGSELKYPLARNVSEASVEQAAKRWLP
4782 PF17453
(Sigma_M_inh)
 click to view
Estimated TM-score=0.50;
hard target.		 >Sigma-M inhibitor (Length=96)
MELVRIFKEHNVFGWISVGTAILSLLLLNLAIISNVTFYSYQMLPFAMAAVPFGVIELFIKRGRTGPGLLGVILNLFVII
CVYTIVSVDTNLQFGF
4783 PF17397
(DUF5404)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Family of unknown function (DUF5404) (Length=144)
MSEEQEPKTSEAEYGTMDFPEFENEEEWLFKVLGIKPRPSSDLDDADKQEDEPLGHTEFLRLQDILQEDKVSSTNDSDTC
QAGYTEENDEASHSDSDIDDNVNVIIGDIKANSSMYMEMFTNMNSQADQDLKLTESDNAMYPTD
4784 PF17394
(KleE)
 click to view
Estimated TM-score=0.50;
hard target.		 >Uncharacterized KleE stable inheritance protein (Length=108)
MSNIIKFPKEIEQPAAPAPVEPAAAPAAPNKAPGAGLLAGLVKFVWVATVLVWPVLKWVLSIITFFQFVRMLYHWNTPGV
YAGWSFLAYFAVLTAITYFVSIYKPKGL
4785 PF17357
(FIT1_2)
 click to view
Estimated TM-score=0.50;
hard target.		 >Facilitor Of iron transport 1 and 2 (Length=86)
STIKTIVATNGDHVYTKVVTDSAAPVYTESTTVTTTITNNGASYVKTLTIAPQTTIGSSTTSKITITNSDNGATYTKTNV
VAISSS
4786 PF17328
(DUF5366)
 click to view
Estimated TM-score=0.50;
hard target.		 >Family of unknown function (DUF5366) (Length=157)
TYIVNQLKELGLYEGMREFFSDSGIKLTLLFLAMLFFFMVFSALKLIADTINELSMLFFSKDEEGNELKKIRGGSWIFLV
ASLTSLAFISYPLGIVLLLCLSCFVYFVYFVYKVNESLSGAGLVGFIFFQVIFWFSFLLAVIYACLKLYNSFMASLP
4787 PF17318
(DUF5361)
 click to view
Estimated TM-score=0.50;
hard target.		 >Family of unknown function (DUF5361) (Length=87)
IICDLAETYNIYDYRQLPVSKVAVFVCGLRSDSRIMMKISDSKLPLDTLLLAGVADRLSLMLWQNTKDGQKGKNQPVSIV
DQLTKQQ
4788 PF17311
(DUF5358)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Family of unknown function (DUF5358) (Length=162)
PAEFAGADYQLSDKNAKQWAIASKQAEQCIYPNLTRIQQQHFAKEDSYIHSQYIFFYPLEKIIGEDYVKIIQNDEKSMNY
ATYQFKKFRTEIANVEPLENKNCLILRTQARDDLDVVKGQYKNGMVDNSKNEDGTQKNTDGVATNQNKFFFDIIKWGSAL
LL
4789 PF17155
(GAPES1)
 click to view
Estimated TM-score=0.50;
easy target.		 >Gammaproteobacterial periplasmic sensor domain (Length=274)
SDRAMNAYMRYIMERADSSFLYDKYQNQSIAAHLMRTFEAPGDPVTAEKRRAFCDAFEAINGTHGVNLTRHNYPALHGTL
QTAATQCTDNLDDALLLPAFDQAVSINRSQDDHSHGLGTLELKFRYYVDLNKHYVYFYDLINSRRFAMHRWTFLQKGTMG
INRKDIDKLFTGRTVISSIYMDDITQENVMSFLTPVYLAGSLKGIVMVDVNQDNLKNIFYTQDRPLVWRYLNVTLKDMDS
GKEIIINQSKNNLFQYVNYSHDIPGGLRVSLSLD
4790 PF17153
(CHASE9)
 click to view
Estimated TM-score=0.50;
easy target.		 >Periplasmic sensor domain, extracellular (Length=116)
HKKIAENSAQINLILINNNLNNFFSKVEKEADALKDAIYLLHDEDEIKRAVLHRMKKIDAVNLVGIMLNNGKYLSFIRTE
NGEVKFLGQSEPGKPFIGDDGDISDNYFNPESRPWN
4791 PF17051
(COA2)
 click to view
Estimated TM-score=0.50;
hard target.		 >Cytochrome C oxidase assembly factor 2 (Length=86)
MFRTLKASQKRSLVNLMFGTTALFATATVIFPSLLPCPAMKNPYLDTQSDPGYEELPENSRVIVIDQQSPKSSLVASKQN
NPPSKS
4792 PF17018
(MICSWaP)
 click to view
Estimated TM-score=0.50;
hard target.		 >Spore wall protein (Length=193)
VVRFHFYISPYARARYINENRKVEDLVQFVAAELERALNLYLEKSDRPVNITFVPIFVREIPPEIELDKCDTNMLELATT
LNNFNLETSDTSIIAVLSCDSRPYEGVFITRGQEVPYITHSLSSQCTTRTLIFLEIEEHKFLAALSTAMIRAAGVDVLNP
LLFEEVINGDAGVRYDIRVNNETMDKIKENMCF
4793 PF16936
(Holin_9)
 click to view
Estimated TM-score=0.50;
hard target.		 >Putative holin (Length=77)
MLVGNAVGLLAGVACSVLVHARIRPDIVIAMVVGIPSAIGLLVILFSGRRWVTMLGAFILALAPGWFGVLVAIQVAS
4794 PF16720
(Albumin_I_a)
 click to view
Estimated TM-score=0.50;
hard target.		 >Albumin I chain a (Length=48)
EHPKLCQSHDECMKKGSGKFCARYPNPESEYGWCIDSDSEALKGFLKM
4795 PF16606
(zf-C2H2_assoc)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Unstructured conserved, between two C2H2-type zinc-fingers (Length=77)
RRGMDEALHQSVDERRGSASDPESQSISRSTTPGSSNVTEESGAGGGQSQTGSIQDDSPHPSSPSSDVGEDSGKVPV
4796 PF16498
(SWIRM-assoc_3)
 click to view
Estimated TM-score=0.50;
hard target.		 >SWIRM-associated domain at the C-terminal (Length=66)
VDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
4797 PF16481
(DUF5058)
 click to view
Estimated TM-score=0.50;
hard target.		 >Domain of unknown function (DUF5058) (Length=218)
NHPFMWVAAGLAVAVVVVQAVIFFTKSYKAGKEIGLTDKQMKSAVKSSAISSIGPSLVILIGMVSLIVVMGGPISWMRLS
FIGSVTYELMAAGFGADAMGVTLGKAGMNNVVYTNAVWTMVLGSLGWLIFTFLFTHKMDKLNNVLSNGKKAMVPIISAGA
MLGSFAYFNADRILKFDNGSVACISGLIIMAVLTYLNNEKGVKWLKDWALSIAMFGGM
4798 PF16311
(TMEM100)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Transmembrane protein 100 (Length=133)
MTDEPIKEILGAPKHPEPVTMEKRNNNDCVVTTVPLVSECQLTAATGGAELSCYRCTIPFGVVILIAGVVVTAVAYSFNS
HGSIISVFGLVLLSSGLLLLASSALCWKIRQQHKKAKRRESQTALVANQRSLF
4799 PF16208
(Keratin_2_head)
 click to view
Estimated TM-score=0.50;
very hard target.		 >Keratin type II head (Length=154)
GFSSGSAIVGGSSGARSSFSSVSVSRVGGGRAGGGGGFGAGGGFGSRSLYNLGGSKRISVGGGLRSGASAGYGFGGGSGF
GLGYGGGAGAALGLGAGGGGGYGLGGFGMGGPGFGGRGGPGFPVCPPGGIHEVTVNQSLLAPLKLDIDPEIQKV
4800 PF16166
(TIC20)
 click to view
Estimated TM-score=0.50;
hard target.		 >Chloroplast import apparatus Tic20-like (Length=175)
RRHRRPIEPARVAKDDFFKIKLPKIAERPEWWWRTLACVPYLISLQISDVGFYVQPFLEKHDAIGDMIYFIPGAINRWPT
WFFMVYCYLGYMWVVKNKELPHYLRFHMMMGMLLETALQVIWCTSNFFPLIHFKGRFGMYYWMAIGFTYICLLLECIRCA
LAGVYAQIPFMTDAA

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