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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14


TM-fold server is designed for automated protein structure classifications. For a given pair of protein structures, the server is to calculate the structural similarity by structural alignment algorithms, and report a posterior probability for the structures belonging to the same SCOP/CATH Fold family. Users are also allowed to compare a large set of protein structures simultaneously by uploading zip/tar files. Please send comments and suggestions to yangzhanglab@umich.edu. More about the server ...


Upload Structure 1 in PDB format (single file *.pdb or files in *.tar.gz, *.tar, *.gz and *.zip) (mandatory):


Upload Structure 2 in PDB format (single file *.pdb or files in *.tar.gz, *.tar, *.gz and *.zip) (mandatory):


Email (optional, where results will be sent to):



References:
Jin-Rui Xu, Yang Zhang, How significant is a protein structure similarity with TM-score=0.5? , Bioinformatics, vol 26, 889-895 (2010) (download the PDF file).

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