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Modeling of Pfam protein domain faimilies by C-I-TASSER (Page 43)

Search by Pfam ID:

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# Pfam ID C-I-TASSER models ranked
by estimated TM-score
(click to view)		 Full name and representative sequence
4201 PF12278
(SDP_N)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Sex determination protein N terminal (Length=138)
QRRRREWQRQQERERQHEKLKQQKILEYERNRAQALKYAEEITSHHSQSKSGSESPSHVRYRDRSTSTASKSGSLHEELD
GSTSGTVPLFRGPQNAQIDTSELRRIKVDIHRNIPVKGPVTELERDILNPEDVIVKRR
4202 PF12069
(DUF3549)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF3549) (Length=338)
TIHTLSELLKNSGCQYQVFDLGRRIQAIDTAQFEQVELGHQPYPYPLKRTAHLAIVYWNESNQPWIWFLKFTLDERGLLA
QADVGQFIKYVIEAMGTRLNQEMSDEQQQKLANNPYTFKPADDKMAVFHSQIRAQLGLPCSQYYEHAQHYFTGDLGWENW
QTVGLQGITDICARLGQEQNGVLLRKALNHLPPQPLYALLGALEHIALPEKLAARLQEHAEAQIAAHEPDLFLLSALVRA
LSGAPAAIQNQVLDAVLNSPRLSHPEVLIGIAGRSWSMLADSGRAQRFLLRLAQSGNQSLFNQLFADLVMLPELRLVLLP
LLHTSPSPELAQALMNLQ
4203 PF12067
(Sox17_18_mid)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Sox 17/18 central domain (Length=49)
YREAQAMGAHFDSYSLPTPDTSPLDIVENDPVFFPSHSQEDCHMMSYSY
4204 PF11914
(DUF3432)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Domain of unknown function (DUF3432) (Length=89)
GSTVSVTSISIPSPVSSYPSPITSYPSPVSSYPSPVPSCYSSPVHTSYPSPSIATTYSTGTSMFQTQVATSFPSSVNIYN
SPVTTPLPD
4205 PF11888
(DUF3408)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF3408) (Length=127)
KIDEDFMKELISQGVPAKRESQPDDAPQPGGETGTAQEGQQTETVRVEKTTPRKRKGGSGDYRETYFQKVELADRQPLYV
SRTTHEKLMRIVTVIGGRKVTVSSYVENILLHHFEQYQDEINTLYES
4206 PF11815
(DUF3336)
 click to view
Estimated TM-score=0.53;
hard target.		 >Domain of unknown function (DUF3336) (Length=137)
SAWRGRRGQLRKQLRAAKTYEEWKQVALELDEYMRFNQWKTTDEDPFYDWRLVRKVRRSLKTLREKDDARGILGVLETCI
RNNFAGIESPRLYSETFYGTKNLIEDYINEQEKALRYVLDTSHLSKEEKRRFFKTVN
4207 PF11801
(Tom37_C)
 click to view
Estimated TM-score=0.53;
hard target.		 >Tom37 C-terminal domain (Length=140)
SKALESASQLAQSKTFKITHENKVKNKQELQQVKYNLQFDNRLQNCIKHWLEVREKLDESMVLPSDILFHANIYVQLNLP
DGNRIRSKLEQTFGDEFINNTSNKMEEIAQSSDEDLGQRDPHFKEQGNVVMSLYNLACKY
4208 PF11763
(DIPSY)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Cell-wall adhesin ligand-binding C-terminal (Length=126)
GDSINPSYVYKNTNVSDPDEGNMYTSTEGNTEAVNVFYYDPTVERILTCDCVRPVYTIYTDDPDSSFDIIKNNNGTFTFV
ESSSGEIQTLHVSQYGALWITSPEYDGETGGMDDVGFRADDVILVA
4209 PF11747
(RebB)
 click to view
Estimated TM-score=0.53;
hard target.		 >Killing trait (Length=68)
ITDAVTQANVKVLGEAPAMAMGNLYQAMAHSTGILFQNAVSAQNQQNILAQAATTQGVMQIYSIDTAA
4210 PF11742
(DUF3302)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF3302) (Length=76)
LDYFALGLLVFVALVIFYGIIVIHDIPYEIAKHRNHPHQDAIHVAGWVSLFTLHVLWPFLWIWATLYRPDRGWGFN
4211 PF11688
(DUF3285)
 click to view
Estimated TM-score=0.53;
easy target.		 >Protein of unknown function (DUF3285) (Length=44)
EPKPSYVKLAMRNMVRKRGTSLKHFFLTTVGLLGVLIGLAYLTR
4212 PF11374
(DUF3176)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Protein of unknown function (DUF3176) (Length=104)
AIYLRINGSSLSSSGTALTFANILGKISSAALIIPTSEALGQLKWNWFNNSKAMWDFEIFDKASRGPWGAALLLFRTKGR
SLAALGALLIVLLLAIDTFFQQII
4213 PF11337
(DUF3139)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF3139) (Length=78)
YKKWWITIGIVLILCVIGYVYWFAIPKHTANKAVDNYLAEQKIKSSQIETRVIKKDWKMGGYLTTIVFKDDPNLKYEY
4214 PF11271
(PorA)
 click to view
Estimated TM-score=0.53;
hard target.		 >Porin PorA (Length=313)
LACILVGLGAFLLAVAILIPTYTVGKLEKTPLDLEVTTIAEGSGSVLNSQALLAGKAEVNTNVPLVSQRYVTTEDPANAD
VVTLQAGQTLRRTDKQGDTGLLSAIVDRNTVDRKTSMPTNDPVGTIQTQPNQPAEEVPRDGLQYKFPFNSEKQSYPYFDL
NARATQDIDFVEETEINGLKVYHYNQTIEPVDLSKVVSSPTNKLTLPAEAWGVPGGTLPVTMTRWYTNVRDLWVEPETGV
VVKGQEQLHQYYARNKDKPEIDVLKVELPFNEQTIEYQVQQAKDGMDKLSTFGRTVPIIAGILGVIALIAGLV
4215 PF11247
(DUF2675)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF2675) (Length=99)
MAMTKKFKVSFDVTAKMSSDVQAILEKDMLHLCKQVGSGAIVPNGKQKEMIVQFLTHGMEGLMTFVVRTSFREAIKDMHE
EYADKDSFKQSPATVREVF
4216 PF11226
(DUF3022)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF3022) (Length=105)
IDMLAHVICDLFPEQTQFAERRDEAGRTSLVIHYVAMRFGATARRITIDVRFDPAALARYRAMPPRMHARSYAVLRAYVE
ATLGSLEETYANGEAVPREVEIEMG
4217 PF11207
(DUF2989)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF2989) (Length=202)
LFGCDNAANTATICKNNPELCDDLHRDSWCRYERADLIQKRYTLKNTPSPTGKQIYQHLINLENYSKCIELAAGVQHIMH
PERTNDRVRAFGISAQNLAQLRETTKDNPDLYLSYYHWIRLNDQAALSRVIKAQQAGSIKDLEILASLASYYQKSDLDKA
KALYLQLLDSADPDSFNPDWLLGLASIYHQQNDLEKTYLFSK
4218 PF11203
(EccE)
 click to view
Estimated TM-score=0.53;
hard target.		 >Putative type VII ESX secretion system translocon, EccE (Length=93)
AVAIRTVWVVLRFDPGANVDAVFRRGGGRRGAERCAVIATARVRRALAAAHCASTILQAGQIHRISAEMLRQYAGAPMHE
DWSGLTLIDSYNV
4219 PF11169
(DUF2956)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF2956) (Length=101)
SPETQQEAMKIAKATQKPGQTKEQTKLIAQGIEKGIALYKKQQKAKARDRDKERKKQLKQKHVDTVSTNDVTETVEPMST
SRNLLPWGLLIVSWVGFAAYI
4220 PF11126
(Phage_DsbA)
 click to view
Estimated TM-score=0.53;
easy target.		 >Transcriptional regulator DsbA (Length=67)
IKEASDHKLKISGYNELIKDIRIRAKDELGVDGKMFNRLLALYHKDNRDVFEAETEEVVELYDTVFS
4221 PF11026
(DUF2721)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF2721) (Length=117)
TTPALLFPAISLLLLAYTNRFLAIATLIRNLHEKHENEPTKNLIEQIKNLRKRVNLIRNMQFLGVSSLLLCVVCMFVLFW
GQIELGHWLFGISLILLMLSLSFSVIEIQISVKALNI
4222 PF10953
(DUF2754)
 click to view
Estimated TM-score=0.53;
easy target.		 >Protein of unknown function (DUF2754) (Length=70)
MQLSAKIRRDWHYYAVAIGLIFIMNGVIGLLGFEAKGWQTYAVGLVTWVICFWIAGFIIRRRPEESNAAE
4223 PF10931
(DUF2735)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Protein of unknown function (DUF2735) (Length=52)
TATIYQFPTRISRKAEERRSEAQRNADLASSDVCAAAIDGCWYHEEAVREET
4224 PF10912
(DUF2700)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF2700) (Length=145)
PARPLVCVLAFIGCARGVASLIFSGNWGERVGDIIFLLLNLMLLFGAAKNNECALKWSQRVVFIAVILAVIQFLIWPVMF
ASYTASGLSDKNNTMAEIEDVLYKTEDEKKKMFARGMITGYALEIGTIVLVGAEVLKYVLVNRLW
4225 PF10898
(DUF2716)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Protein of unknown function (DUF2716) (Length=130)
LNDPEYRTLWDTVHERLAFRPHPRCFPGITEPPGAVTWNLGAGEADTLQEVLERGLRSVGEPGERLHWLDWNHIGYGFDP
DLCGGEGQPEWPGAVYPDGDYYLYLPSDLRFGTFGHPWEATLCVWGTGLV
4226 PF10896
(DUF2714)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF2714) (Length=144)
YNDARAEDSFIKYDKLIASVLLKNNISFNSEIYIKFVEKMTMAINKHYDLLFRDFVITFNVNGRFGNDLLVPMIANFESS
NNEAINFREALTNDTKASQFLYDLNNEIARLLNQKSYVEIFPNIILYISPNTEHLKLLFSRETV
4227 PF10888
(DUF2742)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF2742) (Length=96)
ASRAVSWWSVHEYVAPVLDAAGSWPMAGTPAWRQLDDADPRKWAAICDAARHWALRVETCQEAMAQASRDVSAAADWPGI
AREIVRRRGVYIPRAG
4228 PF10825
(DUF2752)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF2752) (Length=46)
CPFKLLTGYDCPGCGSQRAVHALLHGDIQQAFRYNPLFVIAIPYVV
4229 PF10803
(GerPB)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Spore germination GerPB (Length=52)
MNFYINQTIQINNLRVDSVSNSSVLQIGSAGMIRSLSNLYNTGGFTEPAPEA
4230 PF10726
(DUF2518)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Protein of function (DUF2518) (Length=146)
MPTTADFLQYTQWSGIATIAFAVLTILAFILKWGIRFRLVGTTGFMIVLTAGLFSLSLVPLSRTVIPGAVKYTLVYDNGS
NQAVIATTPEITPEELEATLRQAASNLYSYGRLGAGGNNQLTIRARTIIHPEPGISIPVYLGKVER
4231 PF10721
(DUF2514)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF2514) (Length=160)
WKVLAIVAVLISCWVWGFNHGSNKVEADWQQKWDRELKTQSQAVASTTTEYRTEEQRRQKAANQVANDARQEQAVAIADA
VVADASGDRLRSEAGKLAASASCVPSDPGIADRGKNAARAAMVLSDLLSRADSRAGELARHADRLTVALQACNASYIGVT
4232 PF10718
(Ycf34)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Hypothetical chloroplast protein Ycf34 (Length=76)
MCICINCYYVDRCNTYHAVEAQHQQPHLTENPSFEPESPSINVNIRPQEDYIEMEWDVVGCASFTEEKGKWAKLRP
4233 PF10628
(CotE)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Outer spore coat protein E (CotE) (Length=172)
YREIITKAVVGKGRKFTQSSHTLAPKNRPTSILGCWVINHEYKAKKSGSNVEVDGRYDINIWYSYNNNTKTEVWTETVSY
KDNIKLRYKDEDSIGDDYEVIVRVLQQPNCLECTISPNGNKTIVQVERELLAEVIGETKVCVAVNPKGCDDEDEFDLDVD
DDEFEDLDPDFI
4234 PF10612
(Spore-coat_CotZ)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Spore coat protein Z (Length=167)
MGCGKPTNPIGPIHSAGCVCDVVRAILDIQNQAVRDECSPCTANCFLEPLGGIVSPARSTADTRVFMLITKDGTPFKAFF
SSPSADPCKCTSVFFRVEDMFDECCATLRVLEPLCTYDSTESTVDLLSRDGCCVNMKKICKVDDWNSTDSCITVDLSCFC
AVQCIAD
4235 PF10611
(DUF2469)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Protein of unknown function (DUF2469) (Length=100)
MSAEDLENYETEMELQLYREYRDVVGLFSYVVETERRFYLANQVDLKVRSADGEVFFEVTMSDAWVWDVYRPARFVKSVR
VVTFKDVNVEELAKSDLELP
4236 PF10495
(PACT_coil_coil)
 click to view
Estimated TM-score=0.53;
hard target.		 >Pericentrin-AKAP-450 domain of centrosomal targeting protein (Length=88)
RFQREASLRADAAYAKKFLQLQLDVANACNKAQLRELEDIRTNLLGNKKALSLPSHTTAATSNTKPTLKTFLVMARFIAR
ARLSANNW
4237 PF10269
(Tmemb_185A)
 click to view
Estimated TM-score=0.53;
hard target.		 >Transmembrane Fragile-X-F protein (Length=237)
LKLDHHISCSWWIIFLPLWMFHGIVARGRFSLPAPSAPRNRNWAPCHAVVAMPLLIAFELLLCIYLESLDVRGSAAVDLK
IVFLPLLTFEIIILIDNFRMCRALMPGDEENMSDEAIWETLPHFWVAISMVFFIAATVFTLLKLSGDVGALGWWDLFINF
VIAECFAFLVCTKCGLVVSSEENQRQGRMCSLQDIGGHFMKVPIIVFQVLLVMHLEGTPACAVYIPLPVLFSPIFLL
4238 PF10051
(DUF2286)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Uncharacterized protein conserved in archaea (DUF2286) (Length=138)
KVLVIRAEEGKIVSSDILDGDFAKIAKDVTARALTEWNPEESDLTALRTKLELRYPKPLPPEIADKILELSLKYSLEGND
VIVNLPVLVVSFDNRWIDETTYLDKKIYVIALYLDDNAKKQLEEYAAEATKAPKSVEA
4239 PF10041
(DUF2277)
 click to view
Estimated TM-score=0.53;
hard target.		 >Uncharacterized conserved protein (DUF2277) (Length=78)
MCRNIRTLHNFEPPATDEEVRAAALQYVRKIAGTRDPSQANREAFDQAVEEITAATQRLLDGLTTSAPPKDREEEAAK
4240 PF09977
(Tad_C)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Putative Tad-like Flp pilus-assembly (Length=88)
AGAQRMDDQCAQPTATATANASANGFNSQASGYSLSIVCGRWDLAAYPTPPYFGAAASQLNAVQVTVTKPVPYFFLGPMR
TVSATSIA
4241 PF09932
(DUF2164)
 click to view
Estimated TM-score=0.53;
hard target.		 >Uncharacterized conserved protein (DUF2164) (Length=74)
IEFSKEEKDILVKNIQAYFREELEQDIGNFDAQFLLDFFSEKIGPYFYNRGLYDAQAVLEKRLDSIAEAIYEIE
4242 PF09919
(DUF2149)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Uncharacterized conserved protein (DUF2149) (Length=92)
MSSVANLFDVAMVFAVALLVAMVMFYNMPELVSPNENITIVKNPGEPDMQIIIKEGQEIEVLNMTDKLSGGQGVKMGVAY
RLKDGRVIYVPE
4243 PF09893
(DUF2120)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Uncharacterized protein conserved in archaea (DUF2120) (Length=136)
EIAGHIMGKLDAFEGSKAAMDTTELLIVRGRSRLRIPAEELESTIDQILKELGARKLDMFSDEAADIITIMDEQIRAQVP
IQEETDIYGIYRLKESFEHMNCHADYGMGVVDDIAIFIILWKDKSGMGPLFVELVV
4244 PF09886
(DUF2113)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Uncharacterized protein conserved in archaea (DUF2113) (Length=182)
MKVECYDKEGEKVYDMIVRQILQDVQVIRSINDLRVFVDPREPLFIIVIKFEKAASPIMLEDLAEYEYDKQANEVFIRIK
DETYLPELLKKLWELEGRNKIHQPSRYEVIIDDPKVDLNKLVVHDPQEDMKKKIYDAMFRIIPEGFRVIKHKSEDDIIAM
TCSDEIIKDEWLEKTDKIIEEV
4245 PF09831
(DUF2058)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Uncharacterized protein conserved in bacteria (DUF2058) (Length=176)
SLQEQLLKAGLVDQKKAKQLKQEKRKQAKQTPKGHQVEDETKLRAQQAREEKAQRDREMNRLRQEEADRKALKAQVKQLI
EMNRINRNKGEVGYQFADEGKVKKIYVTQELQDGLASGRFAIARMGDAYEVISRKVAEKIRERAPEFVVVLNDNKNAEPD
EDDPYAAYQIPDDLMW
4246 PF09743
(E3_UFM1_ligase)
 click to view
Estimated TM-score=0.53;
easy target.		 >E3 UFM1-protein ligase 1 (Length=261)
QVLLSERNCIEIVTKLIAEKQLEVVHTLDGKEYVTPAQISREIRDELHVCGGRVNIVDLQQVINVDLLHIENRANDIVKS
EKTIQLVLGQLINQSYLDQLAEEINDKLQETGQVTISELCKAYDLPGDFLIQALSRRLGRIIHGQLDQENRGVIFTEAFV
SRHRARIRGLFTAITRPTPVSNLITRYGFQEHLLYSVLEELVNSGRLKGTVVGGRQDKAVFVPDIYARTQSNWVDSFFKQ
NGYLEFDALYRLGIPDPAGYI
4247 PF09721
(Exosortase_EpsH)
 click to view
Estimated TM-score=0.53;
hard target.		 >Transmembrane exosortase (Exosortase_EpsH) (Length=254)
IGIVLLYLPLLPELVGDWWNDPNYSHGFLIPLVSGYLCWERRDTLRRLPLGSDRGGLLLLVGGLFLFLAGVVAAEEFTQR
FSLIVVLAGVIRYNLGRAVFREVRFPLAYLAFMIPLPYLLYDQIAFPLKLFAARCATFSLHLLGIPVFREGNIIELAAMR
LEVADACSGIRSLISLFALSVIYAYLSQPETWKRIVLVVATIPIAIVANGARVSGTGIIAEYAGIEAAEGFFHSFSGWLI
FVVATLLLVGLGKL
4248 PF09436
(DUF2016)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Domain of unknown function (DUF2016) (Length=72)
ADAALQQSFPSVMVPRFGALAPMERSGERLLIAANGVFLEIVRPWLSVVRHLGAFQHRTAIPYGEAAETTDL
4249 PF09430
(DUF2012)
 click to view
Estimated TM-score=0.53;
easy target.		 >Protein of unknown function (DUF2012) (Length=111)
QQNWAADSRVLLNHGEYIGFVREDGSFIIDNVASGSYIVQVENVHFVFEPIRVDITAKGKIRARKLSVLQPNVVNQLPYP
LKLSAREPTKYFRKREEWRITDILMNPMVLM
4250 PF09362
(DUF1996)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Domain of unknown function (DUF1996) (Length=231)
DPIVSPGQISGHVHTIMGGNGFGFDMTYQQARNSQCSSCPITKDMSNYWVPTLYYHAQNGSFISVPQVGGATVYYEQRGG
PNNDQLLAFPEGFRMLAGNPFLHTYNDTFEQQAVSYACLNYNGPATAETHAFPNNNCPDGLRAQVYFPSCWDGVNLDSPD
HKSHVAYPESVAYNDGPCPASHPKHLISLFYEVIWDVNQFANDWYGDEQPFVWSSGDATGYGYHGDFVNGW
4251 PF09331
(DUF1985)
 click to view
Estimated TM-score=0.53;
hard target.		 >Domain of unknown function (DUF1985) (Length=136)
ISRQLKVAKKHEVWFIFAGKPIRFSLREFAIVTGLSCGRFRKRSKKRSNRNISEKPYWGELFGTLKEIPVSSVIRMLKKK
TVRGDLRLKYAYLALLSSVILPTTHTPKMSQDYAEMIKDLDTFFAYPWGRVSFDML
4252 PF09133
(SANTA)
 click to view
Estimated TM-score=0.53;
very hard target.		 >SANTA (SANT Associated) (Length=90)
LLFEWWLMKAERDYNGRRLTVGGFTKRGEAVGIFRSAPIIKRHDHCTLETADGINIKIQGTINKTRTIDNGFPLEACNAF
LFGFPTAWDK
4253 PF08897
(DUF1841)
 click to view
Estimated TM-score=0.53;
hard target.		 >Domain of unknown function (DUF1841) (Length=135)
SREEVRRFFCDAWQKQIAGGVLTPLEAIAVDWIGEHPEYHALLRDTEGALAQDYTPEQGQTNPFLHLSMHLSISEQVSVD
QPRGIRQAYEALARRLDSPHEAQHQVMECLGEMLWQAQRTGQPPDGDHYVDCVKR
4254 PF08620
(RPAP1_C)
 click to view
Estimated TM-score=0.53;
hard target.		 >RPAP1-like, C-terminal (Length=66)
QARFDFNGNLLSKTDSIPEYIGLHHHGNEPSAPGYTLEELFVLARSTFQQQRVFALQTLARIIKQA
4255 PF08508
(DUF1746)
 click to view
Estimated TM-score=0.53;
hard target.		 >Fungal domain of unknown function (DUF1746) (Length=116)
NLDALVYAEICALYYMDCSFFRLLMRVLVQSFFLSPKSDEFVLLMPTHRPHVVAVLAPNLLCMLLHLLTSLPTAGESTRG
YLHGGVIIDFVGEKAPTSKFKLLLLDMLVLALQCTM
4256 PF08285
(DPM3)
 click to view
Estimated TM-score=0.53;
hard target.		 >Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) (Length=92)
MSKGTRFVTFAVPAVIAYFLLLLHVLPTPFLAQETADQILPVIPWWLLVAFGAYSLSSLGLGLLRFHDTPEAYQSLLGEI
QQAKNELRDQGV
4257 PF08268
(FBA_3)
 click to view
Estimated TM-score=0.53;
easy target.		 >F-box associated domain (Length=124)
ICINGILYYLALDSDGRYFMVVCFDVRSEKFKLVDIECRFDQLVNYKGKLCGIDLKNAYYGGFPLELRMWVLEDVQKREW
SKYVYTLRDDNKVVKVNYNLSVSGMTATGDIVLLLNNASNPYYV
4258 PF08165
(FerA)
 click to view
Estimated TM-score=0.53;
hard target.		 >FerA (NUC095) domain (Length=65)
LEANAPTAETASLLIALLDQLINDCRRPLPKIDSSTPGVNELDLKIQDTRILEKLAIMEEATKLR
4259 PF08151
(FerI)
 click to view
Estimated TM-score=0.53;
very hard target.		 >FerI (NUC094) domain (Length=51)
SDPEDFSAGAKGYLKVSACVLGPGDEAPLEKKEVSEDKEDIEANLLRPTGV
4260 PF08140
(Cuticle_1)
 click to view
Estimated TM-score=0.53;
hard target.		 >Crustacean cuticle protein repeat (Length=41)
GPSGIISPDGVNTQFSHDFANDIVLVGPAGIVTKSGANRQL
4261 PF07790
(Pilin_N)
 click to view
Estimated TM-score=0.53;
easy target.		 >Archaeal Type IV pilin, N-terminal (Length=80)
DAVSPVIGVILMVAITVILAAVIASFVLGLGDQAQQATPQASFSWDYEQDDPSHTTGNVTITHDGGDSIEAQQLYIRGDF
4262 PF07335
(Glyco_hydro_75)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Fungal chitosanase of glycosyl hydrolase group 75 (Length=161)
MDIDCDGANNSAGGCANDPSGQGQTSFKDTVKTYGIPDLDANIHPYVVFGNEGASPSFSPQKNGMKPLSIMAVVCNNQLF
YGVWGDTNGFTSTGEASLAMGKLCFPNEGLSGDNGHDPKDVLYIGFTGSDTVPGKSGANWKAKKTTEFEDSIKALGDKLV
A
4263 PF07226
(DUF1422)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF1422) (Length=112)
KPGRENGTLLLALIAGLSINGSFAALFSSVVPFSIFPLIALVLAVYCLHQRYLNRAMPDGMPKLAAACFLLGVLLYSAIV
RAEYPQIGSNFLPSVLCVALVLWIGMKLKARK
4264 PF07131
(DUF1382)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF1382) (Length=60)
MHKASPVELRTSIEMAHSLAQIGIRFVPIPVETDEEFHTLAASLSQKLEMMVAKAEADER
4265 PF07127
(Nodulin_late)
 click to view
Estimated TM-score=0.53;
hard target.		 >Late nodulin protein (Length=52)
MAQILKFVYALILFLSLFFILINGDRIPCATDADCPPKILPIIHKCINNFCK
4266 PF07114
(TMEM126)
 click to view
Estimated TM-score=0.53;
hard target.		 >Transmembrane protein 126 (Length=177)
ISNIISRKVKQLPESERNLLEYGSAYVGLNAGFSGLIANSLFRRILHVTQARLASSLPMAVMPFLTATLTYVNFLSYPLS
TGDLNCETCAMTRGALVGFGMGGVYPILLAIPMNGGLAARYESSPLPRRGNILNYWITVSKPVCRKMVFPILLQTVFAAY
LGSRQYRLLIKALQLPE
4267 PF06892
(Phage_CP76)
 click to view
Estimated TM-score=0.53;
hard target.		 >Phage regulatory protein CII (CP76) (Length=157)
FQISKHPHYDEACRAFAQRHNMAKLAERAGMNVQTLRNKLNPEQPHQFTPPELWLLTDLTEDSTLVDGFLAQIHCLPCVP
VNELAKEKLQSYVMRAMSELGELASGAVSNERMTSDRKHNMVESVNAGIRMLSLSALALQARLQANPAMSSVVDTMT
4268 PF06880
(DUF1262)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF1262) (Length=104)
EGPSSGYLVRKDEGSDGGGSACCWGLCEGTRVRDLPFPQNRILTVQYDEEHARENTTYSAVVFFIPVLDKPLSSNHYYVV
SGKGKDKGKIYTCSKEEDMSTCCF
4269 PF06712
(DUF1199)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Protein of unknown function (DUF1199) (Length=52)
MLHRNSGFVPASIYRNNNIYKSNQCSGSMETSTISSPSRRIRNNFLGLLGTR
4270 PF06674
(DUF1176)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF1176) (Length=316)
SFSHKDWELACDNTLTCRAAGYSTEEGAGGSVLLTRQAGENTVVSGEVVLADAMDEDPKPVAELSLWIDDTALGALQKAD
NDEWRLTEAQTQAVIRAVKGNGTVEFRGGEEPFELSDNGAFATLLKMDDAQGRTGTPGALVRKGDKPESSVMVAVAAPVI
QQVKVIQAQPRPLTAQELSSVKPQLIDSLTDDDSCDNLQPSDDQPEEGAEPITLTPVDKSHVLISALCWRGAYNEGYGYW
LMDKRLQQKPELITDSGSDYHDGVISLAQKGRGIGDCWSTAAWVWDGKDFQQSSEATTGMCRAIRAGGPWQLPTLV
4271 PF06614
(Neuromodulin)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Neuromodulin (Length=172)
KKKDEAPVADGVEKKGEGPTTTEAAPATGSKPDETGKAGETPSEEKKGEGDAATEQAAPQAPASSEEKAGSAETESATKA
STDNSPSSKAEDAPAKEEPKQADVPAAVTAAAATTPAAEDAAAKATAQPPTETGESSQAEEKIEAVDETKPKESARQDEG
KEEEPEADQEHA
4272 PF06396
(AGTRAP)
 click to view
Estimated TM-score=0.53;
hard target.		 >Angiotensin II, type I receptor-associated protein (AGTRAP) (Length=145)
KMILLVHWLLTTWGCLVFLGPYAWANFTILALGVWAVAQRDSIDAISMFLIGLAVTIFLDIVHISIFYPRQNLTDTGRFG
AGMAILSLLLKPFSCCLVYHMYRERGGELQLHAGFLGPSQDRSAYQTIDSPEAPSDPFSGPEGKN
4273 PF06341
(DUF1056)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF1056) (Length=63)
MIFRRIIGYLWQLSDVLLFISAMIVLDYTAFRINATLGWFVISLILFVLGWLVEVISERKRGD
4274 PF06260
(DUF1024)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF1024) (Length=82)
MNNREQIEQSVISASAYNGNDTEGLLKEIEDVYKKAQAFDEILEGMTNAIQHSVKEGIELDEAIGIMVSQVIYEYKEELE
NE
4275 PF06209
(COBRA1)
 click to view
Estimated TM-score=0.53;
easy target.		 >Cofactor of BRCA1 (COBRA1) (Length=465)
MGLILEEPWVPEKKLKLVMADKELYRACAVEVKRQIWQDNQALFGDEVSPLLKQYILEKENALFSTELSVLHNFFSPSPK
TRRQGEVVQKLTQMVGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAELLMSLHDLDVGDICTVDPCHKFTWCLDACIRER
FVDSKRARELQGFLDGVKKGQEQVLGDLSMILCDPFAINTLSLSTIRHLQELVSQETLPRDSPDLLLLLRLLALGQGAWD
LIDSQVFKEPKMEVELITKFLPMLMSFVVDDYTFNVDQKLPSEEKAPVTYPNTLPESFTKFLQEQRMACEVGLYYVLHIT
KQRNKNALLRLLPGLVETFGDLAFSDIFLHLLTGSLALLADEFALEDFCSSLFEGFFLTASPRKENVHRHVLRLLLHLHA
RVAPSKLEALQKALEPTGQSGEAVKELYSQLGEKLEQLDHRKPSPAQAAETPTLELPLPSMPAAA
4276 PF06191
(DUF995)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF995) (Length=138)
IIAGASFAEAAAARAERKTTPMTHAELYQLYGQKSWIWKEGAGYFSVQARRFIAWSKENGKPSYGVGRWFITGPGKLCFR
AEWHARDGSSPATTCFSHAKRGGVIYQRREPDGAWYVFKNAQVRPDDEFAKLRRGNYV
4277 PF06146
(PsiE)
 click to view
Estimated TM-score=0.53;
hard target.		 >Phosphate-starvation-inducible E (Length=68)
FGAFLNILIALELLENITAYLKKHVIHLELVVVTALIAVSRKIIIFDFKEYSSWHLMSLGVAILCLAA
4278 PF06025
(DUF913)
 click to view
Estimated TM-score=0.53;
easy target.		 >Domain of Unknown Function (DUF913) (Length=385)
TRAVRVVDLITNLDMAAFQSHSGLSIFIYRLEHEVDLCRKECPFVIKPKIQRPSTAHEGEEMETDTDGVQCIPQRAALLK
SMLNFLKKAIQDPAFSDGIRHVMDGSLPTSLKHIISNAEYYGPSLFLLATEVVTVFVFQEPSLLSSLQDNGLTDVMLHAL
LIKDVPATREVLGSLPNVFSALCLNARGLQSFVQCQPFERLFKVLLSPDYLPAMRRRRSSDPLGDTASNLGSAVDELMRH
QPTLKTDATTAIIKLLEEICNLGRDPKYICQKPSIQKADGTSTAPPQRANHAAEEASSEDEEEEEVQAMQSFNPPAQSDT
DSNQQVIRTEERVPIPLMDYILNVMKFVESILSNNTTDDHCQEFVNQKGLLPLVTILGLPNLPVD
4279 PF05957
(DUF883)
 click to view
Estimated TM-score=0.53;
hard target.		 >Bacterial protein of unknown function (DUF883) (Length=93)
DLLADFQTLVNDTEKLLQDTASLAGEQADELRVQIHESLKRARDTLRDTEQNLRERGQAAVQATEDYVQEHPWQSVGLAA
GIGFLLGLLAARR
4280 PF05915
(DUF872)
 click to view
Estimated TM-score=0.53;
hard target.		 >Eukaryotic protein of unknown function (DUF872) (Length=117)
INTRDSSRTSIRSSQWSFSTISNTTQRSYNACCSWTQHPLIQKNCRVVLASFLLLLLGMVLILVGVGLEVAPSPGVSSAI
FFVPGFLLLIPGVYHVVFIYCAVKGHRGFQFFYLPYF
4281 PF05725
(FNIP)
 click to view
Estimated TM-score=0.53;
trivial target.		 >FNIP Repeat (Length=44)
FSKVLPPTTLPNTITTLTFGNDFNQVVRPGTLPNSLTTLKFGYD
4282 PF05422
(SIN1)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Stress-activated map kinase interacting protein 1 (SIN1) (Length=147)
FISTDDTGMCETVMLSDDMPKHYLRKFGNSGAGGDHYHWRRAHKTPPTGGGTTPERNTRHPDAPLQEVDFICYPGLDLSD
DEEDMSTHSFDIQMYPEVGAHRFRSNTAQKLEKLDIAKRRAARIKSVNYQEEVQPPESDDFFKRKEL
4283 PF05396
(Phage_T7_Capsid)
 click to view
Estimated TM-score=0.53;
hard target.		 >Phage T7 capsid assembly protein (Length=122)
EELSAESYAKLAEIGYTKAFIDSYIRGQEALVEQYVNSVIEYAGGRERFDALYNHLETHNPEAAQSLDNALTNRDLATVK
AIINLAGESRAKAFGRKPTRSVTNRAIPAKPQATKHEGFADR
4284 PF05338
(DUF717)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF717) (Length=55)
CISEEDFKDCQAFFAKPLPILVAEISKSLANIDFVDTASQQVDQLGIFLDLIGTE
4285 PF05155
(Phage_X)
 click to view
Estimated TM-score=0.53;
hard target.		 >Phage X family (Length=87)
LLNNGAVDTQRKANTTMNYFTLWQNGVDMREILSSSQYYEHKARLKKIGIDIGQQFDVSRMCPTLRRSEEIEVQSLQIPS
WYQLPKV
4286 PF05119
(Terminase_4)
 click to view
Estimated TM-score=0.53;
hard target.		 >Phage terminase, small subunit (Length=100)
AKKEFNRIAKELQEIGLLTNVDIDMLAAYCDAYTEYQKCTKIIEEEGLMVEYTNKAAETNKVPHPLLTKKKQLFEQMKSI
AGEFGLTPSARAKLAIPKQE
4287 PF05106
(Phage_holin_3_1)
 click to view
Estimated TM-score=0.53;
hard target.		 >Phage holin family (Lysis protein S) (Length=98)
ENPDVWAELLNGLQNSWPQISGSVLAIAICYGRLIYDGVERKNRWVEALLCGALSWSVSSGLEMFGVPSSFAPAIGGVIG
FIGVEKIREFAIRAINKR
4288 PF04947
(Pox_VLTF3)
 click to view
Estimated TM-score=0.53;
hard target.		 >Poxvirus Late Transcription Factor VLTF3 like (Length=167)
HTTYMYKRQNHFKTWLKRTQGKETTTVDKEVVDSVRLELKKQRIDDIKTISHTKVREILKKLRLNKHYNNCVQITAMITG
ITPPQMTSEQETALLQMFDAIQTPFQKIIQSEPRQNMLSYSFLIHKFLELMSWDEYLPYFPLLRSVDKIQYQDWIWRKLC
AEVGFEY
4289 PF04931
(DNA_pol_phi)
 click to view
Estimated TM-score=0.53;
easy target.		 >DNA polymerase phi (Length=785)
ALQRLFRGLCSSRKAARVGFSIALTEILSQIFSPSQTLGSEWSISKALDIWESQSDASGGASGQEERDHHFGRLFGAEAI
IKSSVLFHAKASFQDWTRVLTVIFDLAKKKPWLREECGWIMYRCISDLAAQKLDTKYVEAILDQLYANDLARTPEGVAIW
LAAKDSFSKAKFPQNVWKYEDPLDSRDKSTLAKIMKESSDVEAQSEGGGAKASGVWNSKLHFAWDAVLSRIFVSPQKKEK
SKDKASKSSRTSFVDFWVEVVDNGLFAAASSEERKYWGFLLFIKTLNEAPQSFASLVFTKNLIRCLMNQLAVEDRYLHRM
AVKAAKTIQGRVSKEPEFAAAAINGLMGPTGTVNFDQITKTKTVEKIVAEADEESLKQIVVLFERLIAAPGTDDIKAAAS
SRQNLANLLVSIVRSRASVKAEEGDFHDAIEAILSIFVRFAYFVDKGENTQPPLTQATQELFRNRINSCLNSLIAARKDP
ASLPYAVVRKIRDAAESAEYGKFIIKMDETVREAIDGAFKSLKKLASKEKHSEKEISGVQAFKLLYSMTILQVYNGDGDA
VSMLEELQFCYDKFMGKKSKDDTSDASDALVEILLSFASKPSQLFRRMSEQVFGAFADQVTADGLQSLISILEVKETLAG
QQEMFEQQDDDEDEDMADVDDEEEEDSDVEVVDAKDEGSSDEGSDEGSGSEGSDEEDEDDDELAVFDAKLAEALGTHRAD
QDLKEDSEESDADMDDEEMEALDDQIVKVFRARNKATSKKKDKKDAKENMVNFKNRVLDLLEIYV
4290 PF04776
(protein_MS5)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Protein MS5 (Length=120)
LPEWPGENAFDDKKHYYVVKKSELRENDWIRVYLELAFLTAHLSIRSLDLSKVVITKVAVYTSDEDMALPNEKLNARNAI
FYIKYKYCPNENEDHGCKPTRDGVAIVRRNMDKISGDITL
4291 PF04767
(Pox_F17)
 click to view
Estimated TM-score=0.53;
hard target.		 >DNA-binding 11 kDa phosphoprotein (Length=91)
KHTPFYIDTKEGKYLVLKAIKVCDIRKVECNSGSASCVLKVDKPTPSCERPMSPCERGRSPTRRNDVVPFMRTNMLEDIQ
NSNRNVVSRIL
4292 PF04573
(SPC22)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Signal peptidase subunit (Length=168)
LTRANAILAYTLSVSACLTFCCFLSTVFIDYRANATLNTVKVVVKNVPDYSASREKNDLGFLTFDLQTDLSPLFNWNVKQ
LFLYLTAEYRTETNEINQVVLWDKIVLRGDNAVLDFKNMNTKYYFWDDGNGLRGNKNVTLTLSWNIIPNAGFLPSVSAHG
SHTFSFPA
4293 PF04556
(DpnII)
 click to view
Estimated TM-score=0.53;
hard target.		 >DpnII restriction endonuclease (Length=279)
NFNEWLSKFRSSIANYGYYIDFDKVYRNVNDIKVELNILNSLIGSTDIENDFKNIITKYPETLKCIPILLAVRANEIYAI
DGDGEFSYNFKKAKYSPEQYAVFMRKTGLFELLEKHIIHTLVDYVTGVETGLDSNGRKNRGGHLMEDLVESYIVKAGFEK
NKTYFKEMYIHEITEKWGIDLSAISNSGKMEKRFDFVIKTDKAIYGIETNFYASGGSKLNETARSYKQIAQEVATINGFE
FVWFTDGSGWTSARHNLEETFDVMEHIYSIDDLEKGILS
4294 PF04510
(DUF577)
 click to view
Estimated TM-score=0.53;
easy target.		 >Family of unknown function (DUF577) (Length=171)
LHEIKPLVIECLTMQETKESDMKFLGRIVSLITYNVVICDNGGWYELSDCILWLAENEPVKAFHVFIDLPSLYQSFIDKF
MKVIVEKAEKVLFNPEKDRVDDWSLALETVVKMGIQTLDTEMRVDLIRILLNILVNSVKMLVQKGMEQFLVQGLKHLEKF
VLRDKNLYNYT
4295 PF04467
(DUF483)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function (DUF483) (Length=123)
LKFQIELVEKYKPKVRPAIDPMVSTELGIYRRLDDFEIGKLLDYPECCIKSFVEDVRVAIDREHLKEVEEMKEELKNKGI
YAIVLPSGFIPCSLKCEEAIKRGFIGYLTKEEFDKILELEKEL
4296 PF04385
(FAINT)
 click to view
Estimated TM-score=0.53;
hard target.		 >Domain of unknown function, DUF529 (Length=73)
LDLNTSKSTNEFDYTDQNGVVTFKPNSGYVFSKVSQGTKMVWESTNNVHVTLVRTKSEDNKKYLIVLLTNDMF
4297 PF04334
(DUF478)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Protein of unknown function (DUF478) (Length=68)
MGVQKYTYTNPVLFWGIFEVRGTSKGVGVILTRFFWVFSGRERVLKRSSYIVILNLWLLRGFLEASDY
4298 PF04295
(GD_AH_C)
 click to view
Estimated TM-score=0.53;
very hard target.		 >D-galactarate dehydratase / Altronate hydrolase, C terminus (Length=389)
KTFQGYRRKDGRVGVRNEIWIIPTVSCVNRAAQLIARQAMEELASAKNIDGIYEFTHPYGCSQLGQDQLNTQKILADLVN
HPNAGGVLVLGLGCENNNIAEFKKVLGEYDPQRVRFLVAQEVEDEIQEGLKLIKELVEYASQFKREEVPVSELTVGLKCG
GSDGFSGITANPLVGSFSDKLISCGGSTVLTEVPEMFGAETILMNRAKNQEIFEKTVKLINDFKEYFMGYNQPIYENPSP
GNKKGGITTLEEKSLGCTQKGGTSNVVDVLEYAETVKQKGLNLLSAPGNDMVASTALAASGCQIILFTTGRGTPLGTAVP
TVKIATNSDIFKRKSNWMDFDAGRLLNGESMEKLTDELMDCVLKVASGMATKSENMGFREIAIFKNGVT
4299 PF04217
(DUF412)
 click to view
Estimated TM-score=0.53;
hard target.		 >Protein of unknown function, DUF412 (Length=139)
WLQLLQRGQHYMKTWPAEKQLAPIFPENRVVRATRFGIRIMPPLAVFTLTWQIALGGQLGPAIATALFACSLPLQGLWWL
GRRSVTPLPPTLAQWFHEIRHKLLESGQALAPLEEAPTYQTLADVLKRAFNQLDKTFLD
4300 PF04195
(Transposase_28)
 click to view
Estimated TM-score=0.53;
hard target.		 >Putative gypsy type transposon (Length=67)
VCLYADALEAGMRVPLHGFFCDVLAHFGIAPTQLAPNGWRILAGFLVLCHSAGVPPSLPVFRHFFLL

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