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●I-TASSER ●QUARK ●LOMETS ●COACH ●COFACTOR ●MetaGO ●MUSTER ●CEthreader ●SEGMER ●FG-MD ●ModRefiner ●REMO ●DEMO ●SPRING ●COTH ●BSpred ●ANGLOR ●BSP-SLIM ●SAXSTER ●ThreaDom ●ThreaDomEx ●EvoDesign ●GPCR-I-TASSER ●BindProf ●BindProfX ●SSIPe ●ResQ ●IonCom ●STRUM ●DAMpred

●TM-score ●TM-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13

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Modeling of Pfam protein domain faimilies by C-I-TASSER (Page 41)

Search by Pfam ID:

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# Pfam ID C-I-TASSER models ranked
by estimated TM-score
(click to view)		 Full name and representative sequence
4001 PF09771
(Tmemb_18A)
 click to view
Estimated TM-score=0.54;
hard target.		 >Transmembrane protein 188 (Length=118)
TACEDLKAFERRLTEVISCLQPSTTRWRILLAVVSICTAVGAWHWLTDPNTSEVSFTQSLFNNPFFTISSIILVFLFVLG
IHKRVIAPSIITTRTRQVLTDFNMSCDDTGKLILKPRP
4002 PF09769
(ApoO)
 click to view
Estimated TM-score=0.54;
hard target.		 >Apolipoprotein O (Length=129)
SSKPRSPTPTDRLAAQIGKTRLFLHGHVAAAENKVNEFMDSVLNLEESFTSTIASLAPPPQSGEKLMPGSLYVLVAAMTG
SIVSRNRNILLRATVPVAVGIGAGWVVLPVTMRNVSDLLWKYEQRFPAI
4003 PF09716
(ETRAMP)
 click to view
Estimated TM-score=0.54;
hard target.		 >Malarial early transcribed membrane protein (ETRAMP) (Length=85)
MKLAKLFYFVAFLITIKVFVPGVNNDGFVQAKSAGADSKSLKKLDNDMLRKQRNQKIMIISTIATSLALLLGGALGGYGY
YKQKK
4004 PF09713
(A_thal_3526)
 click to view
Estimated TM-score=0.54;
hard target.		 >Plant protein 1589 of unknown function (A_thal_3526) (Length=52)
VQNLIERCLQLYMNKDEVVKTLLTRAKIDPGFTTLVWQKLEEENANFFRAYY
4005 PF09706
(Cas_CXXC_CXXC)
 click to view
Estimated TM-score=0.54;
hard target.		 >CRISPR-associated protein (Cas_CXXC_CXXC) (Length=70)
EDKNAPLCFFCRERHTYVYKGKYRVFGAEHFTPLSASEDTLPNLFWNGRNKMYLCPYCEFYLFFAAFGFT
4006 PF09690
(PYST-C1)
 click to view
Estimated TM-score=0.54;
hard target.		 >Plasmodium yoelii subtelomeric region (PYST-C1) (Length=60)
KASAVGNKSVRGTKEININNETNGIEFKRETQLKNNNPKDDKDNEEFNCFNIFKRNKRTK
4007 PF09487
(HrpB2)
 click to view
Estimated TM-score=0.54;
hard target.		 >Bacterial type III secretion protein (HrpB2) (Length=113)
TPAVSPTAAPNQSLVNRFQALMQSSCPLPPAMQRVGEPSMISRMVDMQNDGVRAMTEHVDAFGANAPKMGLEEIAAEEMK
LINELTMVGFNLNVSVSLAQSGKNAVQTLFKNQ
4008 PF09327
(DUF1983)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Domain of unknown function (DUF1983) (Length=80)
EEFSKEWKDASDKWNAMWAVKIEQTKDGKHYVAGIGLSMEDTEEGKLSQFLVAANRIAFIDPANGNETPMFVAQGNQIFM
4009 PF09320
(DUF1977)
 click to view
Estimated TM-score=0.54;
hard target.		 >Domain of unknown function (DUF1977) (Length=101)
DDTPDYSFKKTSRFNVQRATPKHNIPFYVKPGFTDNLNDRKLQNFDNKVEASYVRDTQNNCAREQIKRNDMMEDAQGWFF
TDQRRLERAQNMPMPSCQRLR
4010 PF08900
(DUF1845)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Domain of unknown function (DUF1845) (Length=218)
RVGALKSALTIELHTHYAIRLWEGRKKEDITGRRQYPDIIGMPQVIKRAGTISVDAAADNPYADSWLIKLEQALVTASAS
LQQSIATLQEILNALPAQITLSSVSSVEPLNIGVYSHSPLGYRCVWLLVGYDQLAMKTFQAFHYGFISRSERDTLLHNGS
RVIRQIYGLVRSYRPLKVTRADIEEKTPAGLEAIKWLGEPDPDILSGRLRSDFSPPLR
4011 PF08743
(Nse4_C)
 click to view
Estimated TM-score=0.54;
hard target.		 >Nse4 C-terminal (Length=91)
IDLLRFVINPRSFGQTVENMFYVSFLIREGSVKLEFDEDGLPAIAPVRKNSSAEPSRPKATTRHQAIMSIDMATWRDIID
AFDIKEPMIPH
4012 PF08507
(COPI_assoc)
 click to view
Estimated TM-score=0.54;
hard target.		 >COPI associated protein (Length=127)
FFKAANLAIGSLTLLSSLSQLSYLIYDFNAFLLALYAIPLSVLIILLEFQTVPVLYKYCSFYFSFIGRGFLYILLSLLVN
FGGVFKVLITVFTFFLGLIYVAFEFLPQIEEPPNFRAEGAPLSVNDD
4013 PF08498
(Sterol_MT_C)
 click to view
Estimated TM-score=0.54;
hard target.		 >Sterol methyltransferase C-terminal (Length=64)
DFLYTRAGRFVTHLLVKTLEFLHLAPEGSLRVFNFLMTSADALLKGGKEGIFTPLFFVLARKPL
4014 PF08463
(EcoEI_R_C)
 click to view
Estimated TM-score=0.54;
hard target.		 >EcoEI R protein C-terminal (Length=176)
QQLVQSFEAFIQQHKDEITALQILYNRPVRAPLRFEDIKALADVLHAPPHLIDESALWQAYAALQKGKVKGSGQKRLLTD
IVSLVRFAMQQDNELVPYPERVQANFKAWLAQHGQSFSPEQQHWLEMIRDHIAANLGIELEDFDYAPFSQQGGLGRVHQL
FGEQLPQVMDELNREL
4015 PF08365
(IGF2_C)
 click to view
Estimated TM-score=0.54;
hard target.		 >Insulin-like growth factor II E-peptide (Length=56)
KYSKYDVWQKKSSQRLQRGVPSILRARRYRWQAEGLQASEETKVHRPLISLPSQKP
4016 PF08320
(PIG-X)
 click to view
Estimated TM-score=0.54;
very hard target.		 >PIG-X / PBN1 (Length=212)
PTGLHPKLDITFPIEDLKSPSPEKTCSLHAYMTTPSTLFLDRYQFEDKLFLASQNLVALRVLSGEEDLEAPNWVVKQWGS
IALVELASPTSTEHPKGNWTVTIPMHLRYLNATASETGHTTIDAPWPVVFWACEAEEGLKMSTNPFDRINLGYDGLFGPK
TMFYHVPANPENGRLVEQLQVPVLDPTQATWVPLGTLLAVVLGFAWICWKLF
4017 PF08136
(Ribosomal_S22)
 click to view
Estimated TM-score=0.54;
hard target.		 >30S ribosomal protein subunit S22 family (Length=44)
MKSNHQARHLLGLNYKLSRQKKVVLEGDEETTINHIHATGRKRR
4018 PF08034
(TES)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Trematode eggshell synthesis protein (Length=65)
YTSGYQTFLGKRRRGSKSHVKTIFRKRSGYDHNGRKKRSSIFESYGEADSFDRKKIRDVFDVDGY
4019 PF08015
(Pheromone)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Fungal mating-type pheromone (Length=76)
MSDTFTSLDIVLYGAAPRRDSDALDSAALFVNSQSVESSTIVPQLSSISVDEINDLPVDFERRTQGGNGLTFWCVI
4020 PF07939
(DUF1685)
 click to view
Estimated TM-score=0.54;
hard target.		 >Protein of unknown function (DUF1685) (Length=59)
VTDEDLDELKGCIELGFGFDSPEMDQRLSDTFPALELYYAVNKNYHDHSVSKPFTDTSS
4021 PF07801
(DUF1647)
 click to view
Estimated TM-score=0.54;
hard target.		 >Protein of unknown function (DUF1647) (Length=142)
CDCVSQKTGKVHNFCYMDPQNLTSIGKKFSCNHLATLERLKLVDNPGPFVDLSKSSENSKEIVFVSAVSDNHFNEATASI
SAFYKFNPDRKFILYSLGLGDLYIKNIKRDFKNLEVRIFDTSGYPDYSRNWMEYRFKPLILA
4022 PF07758
(DUF1614)
 click to view
Estimated TM-score=0.54;
hard target.		 >Protein of unknown function (DUF1614) (Length=172)
LIGSNINIPVKKIRRDRELYPEEVEVTFFGIRYVIPRVREPSYTIIAVNVGGCVIPVFVSLYLMVQNGLFISPLIATAIV
AFICYKLARPVPGIGIAIPMFIPPLAAALIALVISPDKAPVVAYISGTLGTLIGADILHLRDINRLKAPVASIGGAGTFD
GIFLTGIIAVIL
4023 PF07697
(7TMR-HDED)
 click to view
Estimated TM-score=0.54;
hard target.		 >7TM-HD extracellular (Length=213)
QVGQVAPETIKAPRSIVFEDKAKTEEAREKARSQVPKVYLINPETNAAILGEVNNFFLNIEKILKQNLPPKQKEKQIINE
LPFSLPAGVAYDLARINLERWKATQRAATEILGELLKKEITPENFTEIKGTLTEKVNRYNLSYPEKEVLILSLNYFLRPN
AVYDPEATEKLRDRAAQAVPKVWVSIKQNQKIIGEGEIVTPEHLAKLEALGLL
4024 PF07631
(PSD4)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Protein of unknown function (DUF1592) (Length=128)
ISDLELASRLSFFLWSSMPDDELLRVAERGQLRDPGVLDQQVRRMLADRRSEAFVTNFTGQWLNLRKLPDVTPDLKRFPD
FDETLRRAMRRETERFFESILQEDRSVLELLTADYTFVNERLAAHYGI
4025 PF07506
(RepB)
 click to view
Estimated TM-score=0.54;
hard target.		 >RepB plasmid partitioning protein (Length=182)
ISRLSAIQEQRMIAKAIERHVPKEKIARALSINVRSLVRKATLVEGICEEAVALLKDKMCPMAVFDVLRKMIPIRQIEMA
ELLINANNYSVGYASAILAGTPQAQLVNSTTPKRIKGMTAEALSRMEGELSRLQQAITSIQDTYGQDHLHLTVLRGYLAK
LVDNTKVAKYLERRHPEFFSEF
4026 PF07491
(PPI_Ypi1)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Protein phosphatase inhibitor (Length=55)
TLRLRGAHASSRPSVQWADDVVDNEGLGRKKSKVCCIYHRPKGIDESSDESSSDS
4027 PF07378
(FlbT)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Flagellar protein FlbT (Length=114)
LRFDLGPFEELHIGRCIIKNSHERSLFAVEGNMPILRGSEFLQQTAAHVPLEKLYHCIQQMYLEEAREYQGRYLQLAAES
VRTDRKLSAELETVDQFVRAGNFYRALKVIKKKI
4028 PF07342
(DUF1474)
 click to view
Estimated TM-score=0.54;
hard target.		 >Protein of unknown function (DUF1474) (Length=97)
MNWETKSLIEDVDIIKEKINDAVTTFGWFDDEYFTHDSGHHLTKDEILKHGCKYHEHRRYITQHINLLNMYLKELDTVLD
DIEKASSAKFGDGTDNA
4029 PF07331
(TctB)
 click to view
Estimated TM-score=0.54;
hard target.		 >Tripartite tricarboxylate transporter TctB family (Length=141)
IASIGFLALGILVFVESRDISDSAYGSAIGPKTFPMGLGIALFILGGILLIETIKNKEPKETQKKNKDLYNYKQFIIIFL
VALGYVLLLEKLGYIISTFLFLLISFSTFEKKKWLSSIIVSGAFTLFVYYVFVNVLGGSLP
4030 PF07220
(DUF1420)
 click to view
Estimated TM-score=0.54;
easy target.		 >Protein of unknown function (DUF1420) (Length=670)
MKFGLDANVAYPPLSVLYSIFLIFGCDFLGFYILKLFESSLGKVKNTWIRWQAPLIGALLLSVILYPLALSALTPRFLMK
SAAIFLSVLGCANICFFVKNGTKNLVSISYYSNIFKSIQYHSFFEKIGNDKKIKKSFSLFKLIGFIKNKFNLINKNDVLN
VFIILLMIGYGFLALCPITNADSLDYHIGVAIEILNQGKMPVFSGWFHGRLAGSGEVLNALGLAIGAEQFGSLLQFCGLL
SIYGILSFYSFAEKFSESDGVWRKIIIIAFLSSPVLVFLVSSPKPQLLQIGMTSFAITLLLEIFSKIKTDKNKLFAFSLI
CILIMSATQAKFSFFLSAFLIGLFSIFSLGSIRLFFYGLLISLFFFVLINFPAIFWKIKNYNSTFIDVLIHPLPGNTFPG
VNEFEVSLRNYQDSALIFPLSLIFPNQFGVITTVIGLGLFLIIFVKPIVTQKAFLLSVMIILFVILGSLMGQKASRFFLE
PFVWMLISLIGLNSFGKWNIRFVKEAVSTGILLQACATFVIISVGIYQLFPGVFSISLREKVMSQYANGYSLMKWVGLTL
PKEAVLLSQHRSIALSERKTLSLDWIPFVDFNSAVASPYLKQIKDENVTHILMFGDTSKNTPFSGCIGNTIGKTKSNQVA
RNPFNRNDFFTVILVEFQSDKLPQCANFIL
4031 PF07192
(SNURF)
 click to view
Estimated TM-score=0.54;
very hard target.		 >SNURF/RPN4 protein (Length=69)
MEARDGLHLRRTAAPHVPEVQVQVKCRRRASLSNQECQLYPRRSRQQQVPVVDFQAELGRRFFAGTPRG
4032 PF07141
(Phage_term_sma)
 click to view
Estimated TM-score=0.54;
easy target.		 >Putative bacteriophage terminase small subunit (Length=174)
MQTQNGGRPTILPKMYEEPLFSQIIDKIESGCNDREIYTSLHCSAKTFRKWRDDNIKAYDEAKGIARGNLLELAESALAS
KLTVRTLKETETIYDADGNVEKVKVKEKELDKDSLVAMMVAKAGNPELYNPTEWRRLQQEESSAHDLKAKIEELDDYKLS
KYETPKIEVPKGFE
4033 PF07136
(DUF1385)
 click to view
Estimated TM-score=0.54;
hard target.		 >Protein of unknown function (DUF1385) (Length=241)
MPIIRGMFAFIDSMVIGVQALTFSAEFFEDEEPKEEKKASKLDEFMEKNMIAIAVLLSIAFSTGLFILLPTLAVSLLGKV
SKTPLLMNLVEGVVRIAIFIGYIALISQMKDIKRVFEYHGAEHKTIFCYENGEELTVENVRKHKRLHPRCGTSFLFIVMI
VSILLFSFFRWPSLPVRLITRILLLPVVAGISYEIIKWAGRSDSKLVCTISAPGLWLQKITTREPDDSQIEVAITALKNV
L
4034 PF07098
(DUF1360)
 click to view
Estimated TM-score=0.54;
hard target.		 >Protein of unknown function (DUF1360) (Length=102)
ILALASFRLTRLLVFDKITEFIRRPFHQEVEEKDENGEIETYIEIKGTGLRAWIGELLSCYWCTGVWCSAFLYAVWLLWP
SVAEPLLFILAIAGLAGIIETV
4035 PF07092
(DUF1356)
 click to view
Estimated TM-score=0.54;
hard target.		 >Protein of unknown function (DUF1356) (Length=227)
NSEVHNEDGRNGDVSQFPYVEFTGRDSVTCPTCQGTGRIPRGQENQLVALIPYSDQRLRPRRTKLYVMASVFVCLLLSGL
AVFFLFPRSIDVKYIGVKSAYVSYDVQKRTIYLNITNTLNITNNNYYSVEVENITAQVQFAKTVIGKARLNNITHIGPLD
MKQIDYTVPTVIAEEMSYMYDFCTLISIKVHNIVLMMQVTVTTTYFGHSEQISQERYQYVDCGRNTT
4036 PF07086
(Jagunal)
 click to view
Estimated TM-score=0.54;
hard target.		 >Jagunal, ER re-organisation during oogenesis (Length=185)
MASRGGPMVTGTDGTDYSHRQRIAAQYQISAQNKSRLKYCIFFHYLLFFVMLAKLSADILDRLDIFILEIEELQIPKPLI
WEYVWCISLLFTFLGLTAVRRNRIAMMKRYMLGIGVFGLLPIFYAIIYYLPDVWRYVTTGETEDIALWQDYPYGLLWYGF
IIQAVQVHLFSLYFANNLVSAWSAR
4037 PF07020
(Orthopox_C10L)
 click to view
Estimated TM-score=0.54;
hard target.		 >Orthopoxvirus C10L protein (Length=79)
MPGEGQYHIYSHSGTSKGFASTPGGAVKRPSSGSGIWGPLEKRMCVGGGSGGFWGGSKSLSGGVNGGVNGGVNGGCGKI
4038 PF06972
(DUF1296)
 click to view
Estimated TM-score=0.54;
trivial target.		 >Protein of unknown function (DUF1296) (Length=60)
IPESIQRMVQHIKEIVVLHSDEDVYAMLKECFMDPNEAVQKLLDLDTFHEVKKKRDRKKE
4039 PF06950
(DUF1293)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Protein of unknown function (DUF1293) (Length=115)
MAKPVFVLGIDIMWNPSRGEMAQLNISRPLKPVNSDNFKRRTIGESGDVNSKWDTPLMIDHDYALKLEKSGALVPRREYE
LVLELNQDDPLAGAIVTELIPVDDEIKKHFQASLK
4040 PF06836
(DUF1240)
 click to view
Estimated TM-score=0.54;
hard target.		 >Protein of unknown function (DUF1240) (Length=95)
EKITFSGPVFIIFFSFPFLSYFIVSVIFLNIKNRWPKHHDSFINCFRVIAIVSFFLSFPLSFYVDYKLKSENYLVCERIS
WMSPNTYVKDIKLCD
4041 PF06830
(Root_cap)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Root cap (Length=56)
GFQFHNLTKDVDGVLGQTYRHDYVSKVDISAKMPIMGGAPKYLSSGLFSADCAVSR
4042 PF06799
(DUF1230)
 click to view
Estimated TM-score=0.54;
hard target.		 >Conserved in the green lineage and diatoms 27 (Length=142)
CPVPAEQQPINEYQELQESWFFSWVTLDQRSYIMKLAWVWGWSWLVAGPVAAASFVPKKYLVQFMLCGGAGASVFLALTL
LRLYLGWSYVRDRLLRETIFYEESGWYDGQTWTKPPEILMRDRLIVSYQIQPILQRLKRTFT
4043 PF06783
(UPF0239)
 click to view
Estimated TM-score=0.54;
hard target.		 >Uncharacterised protein family (UPF0239) (Length=86)
SADLDLSTPEVPEPTFLESVLRYGLFLGAIFQLICILAVIVIPTSKGNEQEETESSDNKTNEQMKKPKGAAPQTRQKTKK
ESKKKR
4044 PF06780
(Erp_C)
 click to view
Estimated TM-score=0.54;
hard target.		 >Erp protein C-terminus (Length=140)
IKTLTDKIDEINKDIDGINGKTIVGAEEVIDKITGPVYDDFTDGNKAIYKTWGDLEDEEGEELGKLLKELSDTRHNLRTK
LNEGNKAYIVLEKEPNLKENVNVSDIQSDLEKLKSGLEEVKKYFENEDNFEEIKGYIEDS
4045 PF06686
(SpoIIIAC)
 click to view
Estimated TM-score=0.54;
hard target.		 >Stage III sporulation protein AC/AD protein family (Length=55)
IFKIVGLGIIATILTIIVKQYKPEYGVHISIAAGVMIFLMIAGKLVSVFEVINQL
4046 PF06664
(MIG-14_Wnt-bd)
 click to view
Estimated TM-score=0.54;
hard target.		 >Wnt-binding factor required for Wnt secretion (Length=299)
KCDEIIVLHLGYLNYTQYQINISFHNLSDLKYKIKEVNFTWKMYNSSFSQVEIWFRFVFVVLTFMVTCLFAHSLRKFSMR
DWGIEQKWMSILLPLLLLYNDPFFPLSFLVNSWFPGMLDDLFQSLFLCALLLFWLCVYHGIRVQGERKCLTFYMPKLFIV
GLLWLSAVTLGIWQTVNELHDPTYQYKVDTGNFQGMKIFFVVVAALYILYLVFLIVRACSELKNMPYVDLRLKFLTALTF
VILIISIVILYLRFGSKVLQDNFVAELSTHYQNSAEFLSFYGLLNFYLYTLAFVYSPSK
4047 PF06639
(BAP)
 click to view
Estimated TM-score=0.54;
hard target.		 >Basal layer antifungal peptide (BAP) (Length=76)
MVLVASFVGHAQIIRGETKEDNDTKSMTMTTMRPGSYVTSMDEKSSLCFEDIKTLWYICRTTYHLYRTLKDCLSHC
4048 PF06563
(DUF1125)
 click to view
Estimated TM-score=0.54;
hard target.		 >Protein of unknown function (DUF1125) (Length=55)
MTVILKTEKNRIIVQFECGNDIEAFSCGFLYRKIKIIKIKNGSELIAILEDTKND
4049 PF06533
(DUF1110)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Protein of unknown function (DUF1110) (Length=185)
MAAEAWRARFRERVVEAAGRWERVREGLATALAHVTSPMLAADEEAAAAARTRIQLAMGQLEDASRDLASAMSLMKAADL
LALHGDSVNPSTFLGGIGHLGAQYLAERIAVTKLREAWEDARDAYTNVEWCRSHLDAILLMLDHPHLPSVDGLIEEERAA
ADGFLQAAIGRAELGNERAVDARQD
4050 PF06461
(DUF1086)
 click to view
Estimated TM-score=0.54;
easy target.		 >Domain of Unknown Function (DUF1086) (Length=136)
RAKRRPDQKSERDRPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRFGMPPQDAFNSQWLVRDLRGKSEKNFKAYVSLFM
RHLCEPGADNAENFADGVPREGLSRQHVLTRIGVMSLIRKKVQEFEHINGYYSIPE
4051 PF06385
(Baculo_LEF-11)
 click to view
Estimated TM-score=0.54;
hard target.		 >Baculovirus LEF-11 protein (Length=95)
CLTRSEIQALFREVINTLKHTMNTENVCAHMLDIVSFERIKEYIRANLGHYTVITDKCSKRKVCLHHKRIARLLGIKKIY
HQEYKRVVSKVYKKQ
4052 PF05981
(CreA)
 click to view
Estimated TM-score=0.54;
very hard target.		 >CreA protein (Length=132)
IGSVSTKFKLIGPNDKIVIEAFDDPDIKGATCYLSRAKTGGVSGAVGVAEDTSDASIACRQVGPINLPEEIKNGDSDGEE
VFKKNTSLLFKSLQVVRFYDPKRNVLIYLTYSDRIIEGSPKNSISTIPIMPW
4053 PF05720
(Dicty_CAD)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Cell-cell adhesion domain (Length=82)
IKNNDGESTISGKAITLPTPMIFPPPLFIRFIQYKTDGKLWSNENFEINSGKVECNGEDYELVQSRCITQKIDDDSENVM
DI
4054 PF05620
(TMEM208_SND2)
 click to view
Estimated TM-score=0.54;
hard target.		 >SRP-independent targeting protein 2/TMEM208 (Length=162)
QATKGQKQILEENNKTLDFYAKVMISIEVTYIIFRFTFFNFNSSWFSWVLLLIVTALYSGLYKFMESMAKPTYSESGALI
DGGMDLNSESGTAEHVKDLIILTVITQGLAIFTDWMWLLMFLAPCRAIYLLWVYILAPWIFAQPDETEVDPKKQKKMERK
MK
4055 PF05528
(Coronavirus_5)
 click to view
Estimated TM-score=0.54;
hard target.		 >Coronavirus gene 5 protein (Length=82)
MNNSKDNPFRGAIARKARIYLREGLDCVYFLNKAGQAEPCPACTSLVFQGKTCEEHIHNNNLLSWQAVKQLEKQTPQRQS
LN
4056 PF05452
(Clavanin)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Clavanin (Length=80)
MKTTILILLILGLGINAKSLEERKSEEEKVFHLLGKIIHHVGNFVYGFSHVFGDDQQDNGKFYGHYAEDNGKHWYDTGDQ
4057 PF05344
(DUF746)
 click to view
Estimated TM-score=0.54;
easy target.		 >Domain of Unknown Function (DUF746) (Length=64)
KLDLFVFLLSQPISCLEAGKQMGSLPDDIGQRVKVWRAWLLQLDPSGQWERRVRLGGRPTELNP
4058 PF05289
(BLYB)
 click to view
Estimated TM-score=0.54;
hard target.		 >Borrelia hemolysin accessory protein (Length=120)
NKTNTELGLIVLKNLIEFFVYSDTQDDELFQTGIKKVIDIYKYMNNIYTKSLQKMEMKESKQIVLELETILSKIAKLIDA
INTDADTTLIEDLRFERNNLIEIKTKLLQEELDKINSKNK
4059 PF05248
(Adeno_E3A)
 click to view
Estimated TM-score=0.54;
hard target.		 >Adenovirus E3A (Length=104)
MTSGEAERLRLTHLDHCRRHKCFARGSGEFCYFELPEEHIEGPAHGVRLTTQVELTRSLIREFTKRPLLVERERGPCVLT
VVCNCPNPGLHQDLCCHLCAEYNK
4060 PF05174
(CDRN)
 click to view
Estimated TM-score=0.54;
hard target.		 >Cysteine-rich D. radiodurans N terminus (Length=52)
QLWTFDLEQFSELRVRRNSTATRSILRPAPCFVLAPLAKKLCHLFVKCSKRD
4061 PF04763
(DUF562)
 click to view
Estimated TM-score=0.54;
hard target.		 >Protein of unknown function (DUF562) (Length=145)
RWSEFLSRVLHDETEKHVAVVCNDPQLIKKSFPSHSLSLLENELEESGYSYLNIVSVSQERTCVKERRILSSDPSGRSFT
VILTDLPEGSSDIRNLQLASDRILVSSALDAADACASECKILEYEDPEQEWAQQYASFYRNIDRA
4062 PF04630
(Phage_TTP_1)
 click to view
Estimated TM-score=0.54;
hard target.		 >Phage tail tube protein (Length=197)
MAIVGLKLVKLALVDPKTQQIIKGVEGLSTDGVIEIDSKMLGTRTANISNLEGQATKVPGNNEVQDVMIGPGSPTVAFEF
NNLDFDIKQKILGFKSDKKGGYVYQGEKPHVAVLIESQTLDRKNSVYFGFANGIFQESTQNVATDTDTAQTRQNDHLTYN
ALSATAFGGEPIKKYFTGSSTFDKANMYKEVFGGYTL
4063 PF04148
(Erv26)
 click to view
Estimated TM-score=0.54;
hard target.		 >Transmembrane adaptor Erv26 (Length=205)
MWILPLLGYLGSVVGFCFMTLAIASGLYYLSELVEEHTVMAKRFLTRLIYSIMALQLLLCVVDRFPFLPTLLGIFSHFVY
LGNMRRFPFVKLTDPLFLASCVLVLLNHYVWFKHFSHHQERAYQNMTSYYDTPDDIPSFTEIASYFGLCVWLVPFSLFVS
LSASDNVLPTMGSEPSTSAAAGMVDTGNARRRGQGLVKALVDSVR
4064 PF04117
(Mpv17_PMP22)
 click to view
Estimated TM-score=0.54;
hard target.		 >Mpv17 / PMP22 family (Length=61)
ILEAKPKDEIKEEVRDKFLVIYTTDCLLWPPCQFVNFTYISAQYRVIYVNLVSIVYDIMLS
4065 PF04112
(Mak10)
 click to view
Estimated TM-score=0.54;
hard target.		 >Mak10 subunit, NatC N(alpha)-terminal acetyltransferase (Length=168)
TGQLVKDEYFTLFEAVGALEIMDSKMDSGYIGPGENQAQALEDDYDVTRKLTPEEVLGIMDELLCHEMAWHMGHPLSQTL
FTSLYLDKLLWPVPKTVEEARFNRANTDREKEGSPLLHVVLRAYCLALVKACDFVHDRISHEYYYEEEDFVTQLYNRTLL
SQFDTAHF
4066 PF03817
(MadL)
 click to view
Estimated TM-score=0.54;
hard target.		 >Malonate transporter MadL subunit (Length=117)
MIIYGVAILAFCYIIGQLIGEFLGKLIGVDANVGGVGFAMLLLIFLSDWLHKKSYFDKSTENGILFWNQMYIPIVVAMSA
IQNVKVAVSSGFIAILAGIVPVVICLLTIPLLAKLSK
4067 PF03763
(Remorin_C)
 click to view
Estimated TM-score=0.54;
hard target.		 >Remorin, C-terminal region (Length=104)
LESKINAWREREKAKVDHKADRKMAETQSWQEEMKACNEAKSKMIEVSAEKLKKLKIEQLKNKEAQVQKTVAEKKASIEA
QREKGKIAIDDKAEKYRATNTLPK
4068 PF03760
(LEA_1)
 click to view
Estimated TM-score=0.54;
easy target.		 >Late embryogenesis abundant (LEA) group 1 (Length=70)
EAMKEKASNVAASARAGMEKTKATAQEKKERMTAHDPMEKEIATEKKDVLKTQAEMDKQMAQEHNAAARE
4069 PF03509
(Connexin50)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Gap junction alpha-8 protein (Cx50) (Length=66)
IQKAKGYKLLEEEKPVSHFYPLTEVGVEARCLPTPFETFEEKVNDVGPLEDISKVYDETLPSYGQT
4070 PF03490
(Varsurf_PPLC)
 click to view
Estimated TM-score=0.54;
easy target.		 >Variant-surface-glycoprotein phospholipase C (Length=51)
FTRTAWHPQSWMHDLRSFIGEMAITQLCLLGSHNAASYGIHNGSPFAKDAP
4071 PF03469
(XH)
 click to view
Estimated TM-score=0.54;
very hard target.		 >XH domain (Length=122)
KSMGDLEVAPFVAAAKKKFTANEAEEKAIEFVCQVIDKLGNPEWHPFKIIKVGQKHKEIIDEEDHCLKTIKSEWGNEAYE
AVVTALMEMNEYNPSGRFAVPELWNYEEGRRATLGECVELFE
4072 PF03350
(UPF0114)
 click to view
Estimated TM-score=0.54;
hard target.		 >Uncharacterized protein family, UPF0114 (Length=118)
ISDFRFLALLAVAGSLAGSLLYFLSGCVYIKEAYHVYWTSCVRGVHTGQMVLRLVEAIDVYLAGTVMLIFRMGLYGLFIS
NDSPDERPRWMRISSLDELKTKLGHIIVMILLVKMFER
4073 PF03242
(LEA_3)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Late embryogenesis abundant protein (Length=93)
MARSISNVKIVSAFVSRELSNAIFRRGYAATAAQGSVSSGGRSGAVASAVMKKKGVEESTQKISWVPDPKTGYYRPETGS
NEIDAAELRAALL
4074 PF03239
(FTR1)
 click to view
Estimated TM-score=0.54;
hard target.		 >Iron permease FTR1 family (Length=313)
VAVFFVVFRECLEAVIVISVLLSFLKQAIGEHDRALYRKLRIQVWIGVLLGFIICLAIGAGFIGAYYSLQKDIFGSAEDL
WEGIFCMIATVMISMMGIPMLRMNKMQSKWRVKIARSLVEIPHRKRDYFKIGFLSRRYAMFILPFITVLREGLEAVVFVA
GAGITTQGSHASAYPLPVVVGLICGGLVGYLLYYGASKSSLQIFLILSTSILYLISAGLFSRGAWYFENYRFNLASGGDA
SEGGDGNGSYNIRKAVYHVNCCNPELDNGWDIFNALLGWQNTGYLSSMLCYNIYWLVLIIVLSLMIFEERRGH
4075 PF02620
(YceD)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Large ribosomal RNA subunit accumulation protein YceD (Length=121)
VTGTARASAEGECVRCLEPVELDLDVDFQEMFSYPDSDDRGRSKAAADDEAEDDEDMIPLEDGMFDLEPLLRDAVVLALP
MQPVCREDCAGLCSDCGANLNENPDHHHDAVDIRWAALQGL
4076 PF02206
(WSN)
 click to view
Estimated TM-score=0.54;
hard target.		 >Domain of unknown function (Length=62)
DSIIQKLSATARVVSALSLQNGLSDGSIPVDDVIAELLNIGSADLKGLETFDKKKIDEFVEN
4077 PF01683
(EB)
 click to view
Estimated TM-score=0.54;
easy target.		 >EB module (Length=56)
CKSGYFSNSGSCDPVRSAGEACTGSGQCVENAECSSSSGAGVCRCKTGFYDVTGSC
4078 PF01446
(Rep_1)
 click to view
Estimated TM-score=0.54;
hard target.		 >Replication protein (Length=256)
LRLHQAWFCKSKLCPICNWRRSMKYGVQLGQIIDVAREREPKAKFIFLTLTVKNVSGEKLGEELTNLTKSFDRLFRRAKV
KKAVIGYLRAIEVTYNAERDDYHPHIHVLLMVKASYFKKTEYYISQDEWTTMWQQSAKLDYKPIVDVRKVKPNQRKAKNE
MDLRGAIVETAKYPTKPIEKMGKTEKQKLKVTDDLMKALKNKRQIGFGGLFKEIRKELQLEDVENGDLVHIDDENEESSL
GVEIVAQWNWERMTYV
4079 PF00938
(Lipoprotein_3)
 click to view
Estimated TM-score=0.54;
hard target.		 >Lipoprotein (Length=84)
TSQVISSLSSAQKYFEANKGELNKNNVINILKDGYNSDPNKTVNALLAGWKYTLMDQKLLENNLDPSRFKNTFGPNKNKD
DVTP
4080 PF00895
(ATP-synt_8)
 click to view
Estimated TM-score=0.54;
easy target.		 >ATP synthase protein 8 (Length=55)
MPQLDTSTWFTMILSMVLTLFILFQLKISKHHYPDNPGPKSTKATNQRTPWENKW
4081 PF18864
(AbiTii)
 click to view
Estimated TM-score=0.53;
hard target.		 >AbiTii (Length=184)
SIVLELQRDALDRNVPITDLLRKALVVSRKLHQTSFQEWIESELNGYQGDLEIPDYREMVGQVKGWNPYHGWMPVIINEP
EIMDMLSRRHSSQSISEIENLIERQESSSTLHMPFPSGQQQVLRQAVNFNTEFSLFIGRSALSRVADAVRNTVLTWALKL
EDDGILGEGLSFSNSEKETAAQSN
4082 PF18853
(LPD37)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Large polyvalent protein associated domain 37 (Length=241)
ALAELAAVDELFQNPKATGKRTLKGVFEAIDPTVRFIGDMERSDEEEASGAEQRFLLRTAKGRDFYIFQTPDDVWTDISQ
LHEGGSGARIYQAIAEYAFNTDRTFIGDPAGLTDIALRRRNEAMLSSALKHGTTQHLEPHERQLKGEKAIGVPPLHWKNG
DDLGNIRSLIDVSLGSIKSKFPEIDDARYDFETRTFRDSEGEPLSDEVLARWASSLRGVREARAGSATLKRSILLNTLSR
Q
4083 PF18732
(HEPN_AbiA_CTD)
 click to view
Estimated TM-score=0.53;
hard target.		 >HEPN like, Abia C-terminal domain (Length=131)
KLGEIIARDDKAHYLYFMHLCEMKRANYMAAFAYFKNYFDRVTADLDFVAGNDPSLKKPNYNMFYREGMLIRFYTGVDDS
KTVIENAHKLRNANPLSHSSSQLLDSNDTSKDLCKSIKALSKLIYGYIDKH
4084 PF18547
(HalOD2)
 click to view
Estimated TM-score=0.53;
hard target.		 >Halobacterial output domain 2 (Length=52)
HPDRCSECHLDWGTRHGDGLGKGYDQLGAFVWKCTRCGAVQQSASASHQWVA
4085 PF17738
(DUF5575)
 click to view
Estimated TM-score=0.53;
hard target.		 >Family of unknown function (DUF5575) (Length=282)
NGLEDMTFSSWEEFQSFLISWCEEQKIIFVIRSSVPLTNEDMSQDLIQSLKYSTVNLGCSSYTRKRCPATIHLKLGPDKD
KLIIAKADLNHIHDSEIDLPSRFTRKPSLFVEFPIGKAADISDKFMDRNELTKLLRLHFPFGGESQLLDELESLFNSDPS
AKVKLIYTEDKFIVKNIFLMTSAMQNLLQHFPETMYVDHIPALNQEFDLYSLLCQDESFSWRVCAHCIGRKETSETLRFL
IQTVLQVCPNISTQVKYFTVSPEIRNPLDIQALLPNALVRYC
4086 PF17709
(DUF5554)
 click to view
Estimated TM-score=0.53;
hard target.		 >Family of unknown function (DUF5554) (Length=73)
VERSFVWLSCLDSDSCNLTFRLGEVESHACSSLLWNLLTQYLLPGVGHILRTNFPVLPCVSSCHLIGGKMPEN
4087 PF17701
(DUF5547)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Family of unknown function (DUF5547) (Length=123)
QVLPRICNKVEETFPQLKKVPANHCGICSAVPMGFSLSKSVTQVTAMHTDSKMDDQLIQGTEKTKLEPVTQLFQNTKKIR
FEDTSQVNFSRNEGTGTGYLSEKALGSVVYVKESDGIEMTDVE
4088 PF17630
(DUF5511)
 click to view
Estimated TM-score=0.53;
easy target.		 >Family of unknown function (DUF5511) (Length=69)
MSQNNFYMVEHVDQVKNEVHLSKYLFNKQVIVKVSEKEAAAYAEFMNGAVEHDSIPFVKYDEERGLICE
4089 PF17596
(DUF5492)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Family of unknown function (DUF5492) (Length=80)
MDSSNCIKIDVKYDMPLHYQCHNNADKDIVNAYDTIDVDPNKKFIINHNHEQHQVNETNKLVDKTFINDTATYNSCIIKI
4090 PF17585
(Phage_Arf)
 click to view
Estimated TM-score=0.53;
hard target.		 >Accessory recombination function protein (Length=47)
MLHDFNDEEFIALISPEIEEEVEQQINLAAERNNPPITWAEFRGDFT
4091 PF17572
(DUF5478)
 click to view
Estimated TM-score=0.53;
easy target.		 >Family of unknown function (DUF5478) (Length=86)
LGEPMYYPSNIDTNEALINFLRPLCATDRTRATYAVPWNCNGIFHCNYFSIPFYILSCHNNAYSFVNDGCIDFNSSDCPL
YPLNVL
4092 PF17552
(DUF5464)
 click to view
Estimated TM-score=0.53;
hard target.		 >Family of unknown function (DUF5464) (Length=51)
MFKKVGKFLAALAAILTLAYILAVYPQVALVVVGACYLAAVCACVWSIVNW
4093 PF17517
(IgGFc_binding)
 click to view
Estimated TM-score=0.53;
hard target.		 >IgGFc binding protein (Length=294)
TAVIFPVTDWGTEYFIFTPTGTPQGSFKEFSVTNGKESNKVEIFPQGSISFQGRVYDSGSQMVIDLQPYESVQLQSPHDL
SGTRVTSQRPVAVFTGHTCTWQFSKCNFVFEQLLPVSGWGSSFIVPPLSIQTKYDSVFLQASQPTKVTVQYPSRQDVLSL
TGGQFKELQYHSPETLSIQADQGIQVLLFFNGVTLNLDKYYDSFLMTILSTDRYCSSYSIEALQDFENQILIVAQTSAIA
ELRIDGVNLPATVQWKKVTGTDFSWAEMPVKYTPDRNRHTVSSSGSSFALYTIG
4094 PF17510
(GP44)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Gene product 44 (Length=107)
MSDRISAVLMVPRDDALPMDVQAVNHRREVINLMKEIGEIDENSVRYKNATDQATISLGDNMMTCWQHNLIAVLYYADGK
ANKEIGGPIIHQDYTNRRHSCVRVERN
4095 PF17487
(Ribosomal_S12)
 click to view
Estimated TM-score=0.53;
easy target.		 >Ribosomal protein S12 (Length=87)
LFFCRSLYLYGLCCRFCLFISIFYVSPRLPSSGNRRIVLAVFYLYNFVWVIRVFFCCVFSVGLFSLFIIEGGGFIDCPGL
KLFTRFI
4096 PF17436
(DUF5415)
 click to view
Estimated TM-score=0.53;
hard target.		 >Family of unknown function (DUF5415) (Length=66)
MAKAKTPFEKAASKILERRGVSETQWKQEVLEKAQFDLLRGKDKDLEGYIYQREREKLVFDEIIKH
4097 PF17428
(DUF5412)
 click to view
Estimated TM-score=0.53;
hard target.		 >Family of unknown function (DUF5412) (Length=118)
KSLLIILICSLSFFCLIGYGVYWAFFDMNRLPTGEYLTEETSPDGTYTLKAYISDGGATTSYAIRGELVYNEKKNKTKNI
YWNYREEDAEINWLDDNTVVINGHALNVLHDKFDYRNQ
4098 PF17427
(Phi29_Phage_SSB)
 click to view
Estimated TM-score=0.53;
very hard target.		 >Phage Single-stranded DNA-binding protein (Length=123)
MENTNIVKATFDTETLEGQIKIFNAQTGGGQSFKNLPDGTIIEANAIAQYKQVSDTYGDAKEETVTTIFAADGSLYSAIS
KTVAEAASDLIDLVTRHKLETFKVKVVQGTSSKGNVFFSLQLS
4099 PF17423
(SwrA)
 click to view
Estimated TM-score=0.53;
hard target.		 >Swarming motility protein (Length=116)
MKRASIVREKKYYELVEQLKVRSQDVTFSATKAVGLLMLFSRYLVNYTSVESVDDINEDCAELYFNYLMDNHKRLGINLT
DIKRSMQLIGDILDVEVNHYLKDFSLSNVTLWMSQE
4100 PF17395
(DUF5403)
 click to view
Estimated TM-score=0.53;
hard target.		 >Family of unknown function (DUF5403) (Length=92)
MAEVKPNLDSIVAHLPGVREAVADELEHRADRVRAVVEAHRHSGALAAHTRVRTNRTDSTVTLEDPAVFAINYGHMAPNG
RWVPGIHAIEAG

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