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●I-TASSER ●QUARK ●LOMETS ●COACH ●COFACTOR ●MetaGO ●MUSTER ●CEthreader ●SEGMER ●FG-MD ●ModRefiner ●REMO ●DEMO ●SPRING ●COTH ●BSpred ●ANGLOR ●BSP-SLIM ●SAXSTER ●ThreaDom ●ThreaDomEx ●EvoDesign ●GPCR-I-TASSER ●BindProf ●BindProfX ●SSIPe ●ResQ ●IonCom ●STRUM ●DAMpred

●TM-score ●TM-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13

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Modeling of Pfam protein domain faimilies by C-I-TASSER (Page 39)

Search by Pfam ID:

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# Pfam ID C-I-TASSER models ranked
by estimated TM-score
(click to view)		 Full name and representative sequence
3801 PF06076
(Orthopox_F14)
 click to view
Estimated TM-score=0.55;
hard target.		 >Orthopoxvirus F14 protein (Length=73)
MKHRLYSEGLSISNDLNSIIGQQSTMDTDIEIDEDDIMELLNILTELGCDVDFDENFSDIADDILESLIEQDV
3802 PF06074
(DUF935)
 click to view
Estimated TM-score=0.55;
easy target.		 >Protein of unknown function (DUF935) (Length=511)
ILDIHGNPFRFEDRLQTENESRLAALQHHYSEHPASGLTPMKAARILRNAEQGDLVAQAELAEDMEEKDAHLQSELGKRR
GAMLNVEWQIVPPANATPEEQRDAEMIEEILRDAVWFDDCIFDATDAILKGFSCQEIEWETHGNMTLIKGVHWRDPAWFM
TPQFERNSLRLRDGSAHGVELQPFGWVKHIAKAKTGYLSRIGLVRTLVWPFIFKNYSLRDFAEFLEIYGLPLRLGKYPEG
AGEKEKQTLLRAVMSIGHNAGGIIPRGMEIEFQKAADGSDATFMAMIDWAEKSMSKAILGGTLTSQADGATSTNALGNVH
NDVRLEVRNADLKRLAATLTRDIVYPLYALNCKSFNDARRIPRLEFDIAESEDLNAFAEGLNKLVDIGFKIPKQWAHDKL
QVPIAGENEEVLARNQPNPTAYLNSQSHQKMAVLSVQRDPDDLLDELEPSVEAYQAIIDPMLKPVVNALAEGGYEFAQEK
LASLYADMDDSELEKILTRAIFVSDLLGRAN
3803 PF06067
(DUF932)
 click to view
Estimated TM-score=0.55;
very hard target.		 >Domain of unknown function (DUF932) (Length=226)
PLSVVSQRYQVVQPREVLEFYRDLTERSGYELETAGVLKGGRKLWALARTGQSTALKGNDVVNGYLLLATSCDGTLATTA
TPTTIRVVCNNTLTIAINGASQAIKVPHSTRFDPRTVKQQLGITVSQWDDFMYRMRTLAARPVKDHEAKAYLRSVLCEVQ
TDKPEHTGLSNERALNKVLSMYEGHGRGAELESAKGTAWGLLNSVTEYVDHERRARSNEYRMDAAW
3804 PF05987
(DUF898)
 click to view
Estimated TM-score=0.55;
hard target.		 >Bacterial protein of unknown function (DUF898) (Length=339)
TPVEFTGKAGEYFGIWIVNLLLSIITLGIYSAWAKVRRKKYFYQNTLIDGVGFDYHASPIAILKGRIIAFVFFMAYIFSQ
HISPFLPTVFALIILFLMPWLVIRTMTFNARNSSYRGLRFDFNGDMREAAIVFIGLPILIIFTLGLIVPYMVMRQSRYLI
QNHKFGLTAFSMDAQAKDFYQIYGKALLLLLGIGAALSVAVTLTVDQNFLLNAVNDMRTVETFANFGIIIAVFFLFYFLV
ILGIGAYIQSRISNLVWNSTTLGNLSFHSHLRARDMLWLYLSNLLIIICSFGLLTPLAHIRMMRYRASRLNLTGETDFER
FIGDKKADVKATGAEMAEM
3805 PF05886
(Orthopox_F8)
 click to view
Estimated TM-score=0.55;
very hard target.		 >Orthopoxvirus F8 protein (Length=65)
MEGSKRKHDSRRLQQEQEQLRPRTPPSYEEIAKYGHSFNVKRFTNEEMCLKNDYPRIISYNPPPK
3806 PF05846
(Chordopox_A15)
 click to view
Estimated TM-score=0.55;
hard target.		 >Chordopoxvirus A15 protein (Length=90)
MFVDDKTFVVYKTWPTGLIQGTRKSVPFPTRHSCTFSSDVRIDNSYSSVVLSNPTFVQLLKMCVHIKRVQWKGKIILLFE
CDNKPPPFRL
3807 PF05832
(DUF846)
 click to view
Estimated TM-score=0.55;
hard target.		 >Eukaryotic protein of unknown function (DUF846) (Length=138)
KPTIVLAHLSFKAASLFFYFFANFFTSSFIVQFLVILTLLSMDFWAVKNITGRLLVGLRWWNFVDADGNNHWKFESAKDM
TRFPAIDRRVFWLGLVVGPAVWIFFVVTAFLTLKFEWMIVALLGALMNLANLWGYLRC
3808 PF05732
(RepL)
 click to view
Estimated TM-score=0.55;
hard target.		 >Firmicute plasmid replication protein (RepL) (Length=163)
TTRKKVKVTGTETYINQSTGEIKEMQVIDIEERDFNFHKVWLEHIIHSMDLIGNQKTRLAFWLINNLNRDNVLIMTQRKI
AEKTGISLETVRQTMKALMESGFLIKINSGAYCVNPDAVFKGGKTDRLNVLIQYRKSEQENTKTSEPTSEKDEPSLFNNE
QLK
3809 PF05710
(Coiled)
 click to view
Estimated TM-score=0.55;
very hard target.		 >Coiled coil (Length=88)
MTILASISSIGNVKSISKSNNFSSLSNSSLQSSNSIQCGGCGGGSPLIGTVGNLVGGVLVGTGIIVGTVVGTVNGVVGGL
LSGPNCGC
3810 PF05696
(DUF826)
 click to view
Estimated TM-score=0.55;
hard target.		 >Protein of unknown function (DUF826) (Length=65)
MPEIKGTVTEDLVKQALYSGEVNKLLKAQVRKDFEAQIDTYVDEVLAKLIGPAAAASGSDNEPKT
3811 PF05599
(Deltaretro_Tax)
 click to view
Estimated TM-score=0.55;
very hard target.		 >Deltaretrovirus Tax protein (Length=87)
MLIISPLPRVWTESSFRIPSLRVWRLCTRRLVPHLWGTMFGPPTSSRPTGHLSRASDHLGPHRWTRYRLSSTVPYPSTPL
LPHPENL
3812 PF05512
(AWPM-19)
 click to view
Estimated TM-score=0.55;
hard target.		 >AWPM-19-like family (Length=141)
LLNFCMYVIVLGIGGWAMNRAIDHGFIIGPGFDLPAHFSPIYFPMGNAATGFFVTFALIAGVVGAASAISGINHIRSWTA
DSLPSAAAAATVAWTLTLLAMGFACKEIELRIRNARLRTLEAFLIILSATQLLYIAAIHSA
3813 PF05078
(DUF679)
 click to view
Estimated TM-score=0.55;
very hard target.		 >Protein of unknown function (DUF679) (Length=168)
TAANLAQLLPTGTVLTFQALAPSFTRGGACYTSNRCLISVLIALNAVFCVFFSITDSLVGADNRLYYGVATLRSLYVFNY
NGADEEVRRRVLGDLEEYRLRPLDYVHAVFTVLVFLTIAFGDAMVQHCLFPDAGPNARELLVNLPLGAGVVSTLVFIVFP
TSRKGIGY
3814 PF04995
(CcmD)
 click to view
Estimated TM-score=0.55;
easy target.		 >Heme exporter protein D (CcmD) (Length=44)
GGYAFYVWLSVGMTLLALGCLIIHTLVQRKQLLKEIRQRESRER
3815 PF04964
(Flp_Fap)
 click to view
Estimated TM-score=0.55;
hard target.		 >Flp/Fap pilin component (Length=44)
FMSDESGATAIEYGLIAALIAVVIISAVTALGSTIKTKFNAVVT
3816 PF04875
(DUF645)
 click to view
Estimated TM-score=0.55;
hard target.		 >Protein of unknown function, DUF645 (Length=59)
LSDVQHGQFGFTKGSIIAVIWFSLSRTLNRGQLNLDRFEFWQPTSQLLVLDVCLFDAFA
3817 PF04740
(LXG)
 click to view
Estimated TM-score=0.55;
hard target.		 >LXG domain of WXG superfamily (Length=201)
KTLDVHALHHAIDQTLEQLKQQSDELSKVKKAVEGITSLDDALKGKGGDAIRAFYEECHTPFLQFYDTFIEEYSSTLKKM
KSALNSLEPNHNGFISQSFLEHELEQGLNAADRTTKRLVSKTNATIAKVSHIVDLPDLNDSGFHEQNQKALKEINQTIEK
LHAFDREQTSALKTAENDLETMQRYISRLEKMYTGPKIEIT
3818 PF04714
(BCL_N)
 click to view
Estimated TM-score=0.55;
hard target.		 >BCL7, N-terminal conserver region (Length=49)
SRSIRAETRSRAKDDIKKVMNVIDKVRHWEKKWVTIGDTTMKIYKWVPV
3819 PF04654
(DUF599)
 click to view
Estimated TM-score=0.55;
hard target.		 >Protein of unknown function, DUF599 (Length=201)
MVPLSFMISISYHLWLWHKVRTQPLSTVIGANAHGRRLWVSTIMKDNEKKNILAIQTIRNTIMGSTLMATTSIVLCCGLA
AVVSSSYSVKKPLNDTIYGAQGQFMVALKYVTLLVLFLFSFMCHSLSIRFISQVNFLINCPQDSTLTSTYVSELLEKSFT
LSMIGNRLFYSALPVMLWIFGPVLVLLCSSTMVPVLYNLDL
3820 PF04550
(Phage_holin_3_2)
 click to view
Estimated TM-score=0.55;
hard target.		 >Phage holin family 2 (Length=86)
MEEHEKTFVTLVLLGALIALGKMLTGDEPITLRLFIGRIILGSAVSVMAGVLLIWWPGISPIAVTGIGSALGIAGYQLIE
VWLRKR
3821 PF04448
(DUF551)
 click to view
Estimated TM-score=0.55;
very hard target.		 >Protein of unknown function (DUF551) (Length=68)
GWISCSERMPEKGQNVLISVNFDSSLVEPLICSARYTGSTFRRGDATIKPGNAIEQATHWMPLPEPPQ
3822 PF04336
(ACP_PD)
 click to view
Estimated TM-score=0.55;
hard target.		 >Acyl carrier protein phosphodiesterase (Length=104)
YDHFLAKNWDNYSDTPLKDYVNNFYNSLEHHYDILPKRIQKMMPYMITDNWLLSYASIEGIAKVLAGMNRRTKNRSSMNE
ATEELQEFYTEFEEEFTSFFNELI
3823 PF04318
(DUF468)
 click to view
Estimated TM-score=0.55;
very hard target.		 >Protein of unknown function (DUF468) (Length=84)
MHGTCLSGLYPVPFTHKAHDYPHFNIYISFGGPKYCITALNTYVIPLFHHLLSTQFIYTYVNITKKSPLKSPKHKNILSF
NDNT
3824 PF04241
(DUF423)
 click to view
Estimated TM-score=0.55;
hard target.		 >Protein of unknown function (DUF423) (Length=88)
LGAFGAHILEGKLSDHYLSTWQTGVQYQMFHALALLAVGLLMSKFPASSLISWSGWLFFAGIVLFSGSLYVLSLTGVKVL
GAITPIGG
3825 PF04144
(SCAMP)
 click to view
Estimated TM-score=0.55;
hard target.		 >SCAMP family (Length=172)
EKNWPPFFPIIHNDIGNEIPVHLQRTQYVAFASLLGLVLCLFWNIICVTAAWIKGEGPKIWFLAVIYFILGCPGAYYLWY
RPLYRAMRNESALKFGWFFLFYLVHIAFCVYAAVSPSILFVGKSLTGIFPAISLIGKTVIVGVFYFLGFAMFCMESLLSM
WVIQRVYLYFRG
3826 PF03804
(DUF325)
 click to view
Estimated TM-score=0.55;
hard target.		 >Viral proteins of unknown function (Length=73)
LKYALRLTREYKENIIPHFDHLTRLRDLIDGMIKNEDVQRFNRTSRNDLISACMQINVHTYMPNATIDMRKQP
3827 PF03788
(LrgA)
 click to view
Estimated TM-score=0.55;
easy target.		 >LrgA family (Length=93)
QFIGELLSRFFHLPIPGNVMGMGLLLICLWRGWVKVQWIQEAAELLLSHLALFFVPAGVGVMVYFDLIAAEWLPIVVATV
VSTFVVMAVTGRV
3828 PF03777
(ChpA-C)
 click to view
Estimated TM-score=0.55;
hard target.		 >ChpA-C (Length=56)
GYAHADSGASGSSSNSPGVLSGNTVQVPVHVPVNVCGNTVDVVGVLNPAAGNSCAN
3829 PF03691
(UPF0167)
 click to view
Estimated TM-score=0.55;
very hard target.		 >Uncharacterised protein family (UPF0167) (Length=173)
FPKFRYHPDPIGTGAFKKADKPQICECCGKKTGYVYESPFYSTEDVECLCPWCIADGSAAKKFDGEFQDAYSCEEIDDVS
KLDELIHRTPGYCGWQQEVWLAHCNDYCAFVGYVGMAELEKMGLSDKLEDIYRKDEAMFDIGDIRECMTNGGSMQGYLFR
CLHCGKYQLYADC
3830 PF03683
(UPF0175)
 click to view
Estimated TM-score=0.55;
easy target.		 >Uncharacterised protein family (UPF0175) (Length=74)
FPDSVFSALRKDPDEFAQEMRIAAAVKWYEMGEISQGKAAEIAGLNRAEFINILARYQVSPFQYTTQELAEELA
3831 PF03682
(UPF0158)
 click to view
Estimated TM-score=0.55;
hard target.		 >Uncharacterised protein family (UPF0158) (Length=157)
QNPLILRCHRLMEAFAKSDDERDFYIDRLEGFLIYIDLDKPQAELDALQEELEQNADRYCQIPKLSFYETKKIMEGFVNE
KVYDIDTKEKLLDIIQSKEARENFLEFIYDHHAEQEKWQQFYQERSRIRIIEWLRLNHFHFVFEEDLDLPRPLVEKL
3832 PF03631
(Virul_fac_BrkB)
 click to view
Estimated TM-score=0.55;
hard target.		 >Virulence factor BrkB (Length=254)
NDAMALGGQLAYFFLLFLFPFLMFLVSLGGLVVDDPEAILKTLVASTQGFLPQAAIEILSDHLDRTLRSPSSLAFLFSGL
LTFAMGSVCALQIIGAANRAYGVPETRPFWKRWLIAILLILGFTLLVATMAFMVLSPHSGAYLQRTVGLPDVLVDLWGGL
SWLIAFVNLTLAFAALYHMAPDTELSFRWVTPGGLMTTVLLLVSSQIFILWANNIFRSNQLFGQLGAGIVLLLWLFVIGL
VVLAGIEINAELAR
3833 PF03617
(IBV_3A)
 click to view
Estimated TM-score=0.55;
hard target.		 >IBV 3A protein (Length=57)
MIQSPTSFLIVLILLWCKLVLSCFREFIIALQQLIQVLLQIINSNLQSRLTLWHSLD
3834 PF03597
(FixS)
 click to view
Estimated TM-score=0.55;
easy target.		 >Cytochrome oxidase maturation protein cbb3-type (Length=41)
LAYLIPVALFLGALGLGGFLWALRSGQYDDLDGAAERILID
3835 PF03432
(Relaxase)
 click to view
Estimated TM-score=0.55;
hard target.		 >Relaxase/Mobilisation nuclease domain (Length=234)
TKSTSRAINYAEKRAVEKSGLNCDVDYAKSSFKATRELYGKTDGNQGHVIIQSFQPGEVTPEQCNQLGLELAEKIAPNHQ
VAVYTHADTDHVHNHIVINSIDLETGKKFNNNKQALRNVRDFNDEVCLEHGLSVPEKDTARLRYTQTEKAIADPNTKSTA
QYSWKDEIREAIDQSQATNMDEFKDHLNQHGIEIERVTPKSITYRHLAEDKKVRGRRLGEDYNKGGIEDGFERQ
3836 PF03245
(Phage_lysis)
 click to view
Estimated TM-score=0.55;
hard target.		 >Bacteriophage Rz lysis protein (Length=126)
AITYKEQRDTVTHKLTLANATITDMQTRQRDVAALDARYTKELADAKAENDALRDDVAAGRRRLLVNATCPAMPTGKSTS
AARVDNAASPRLADSAQRDYFTLKERVTTMQKQLEGAQDYIRTQCL
3837 PF03135
(CagE_TrbE_VirB)
 click to view
Estimated TM-score=0.55;
very hard target.		 >CagE, TrbE, VirB family, component of type IV transporter system (Length=204)
VLSTYEDKHGALCSQQLEFYNFLLSGEWQKVRVPSCPLDEYLGTGWVYAGTETIEIRTANATRYARGIDFKDYANHTEPG
ILNGLMYSDYEYVITQSFSFMTKRDGKEFLTRQKQRLQNTEDGSASQIMEMDIAIDQLGRGDFVMGEYHYSLLVFAEDME
TVRHNTSHAMNILQDNGFLATVIATATDAAFYAQLPCNWRYRPR
3838 PF02705
(K_trans)
 click to view
Estimated TM-score=0.55;
easy target.		 >K+ potassium transporter (Length=571)
YQSLGVVYGDLGTSPLYVFYNTFPHGAKDREDVIGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTFALYSLLCRHANL
KIIPNQHRTDEELTTYSRATILERSFAAKTKRWLETHAFNKNSILMLVLVGTCMVIGDGILTPAISVLSAAGGIKVNRPD
VDSGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMYNIWNYDSSVLKAFSPIYIYRYLRRGGREGWT
SLGGILLSITGTEALFADLAHFPVSSVQIAFTLVVFPCLLLAYSGQAAYLLLNLDHTKDAFYRSIPEKIYWPVFVVATAA
AIVASQATITATFSIIKQALAHGCFPRVKVVHTSKNFLGQIYIPDMNWILMILCIAVTAGFKNQNQIGNAYGTAVVLVML
VTTLLMILIMLLVWHCHWILVVIFTLTSLVVECTYFSAVLFKVDQGGWAPLVIAGVFFIIMYVWHYGTLKRYEFEMHSKV
SMAWVLGLGPSLGLVRVPGVGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHM
FRCVARYGYKD
3839 PF02582
(DUF155)
 click to view
Estimated TM-score=0.55;
hard target.		 >Uncharacterised ACR, YagE family COG1723 (Length=183)
VFLFSYGVVVFWNFTENQEKDILADLTFAENDSGQSLLTRPLNEEDFETEEFHFEYSENIKRPRIFNDMITLLPRSDHMI
KLSISHAIAQSTKLCLFEERMSETMLDAQHVPKRLALTGELNMTRTEILKILGRLFKSRVDINLSSNILDVPNFFWDSEP
TLNPLYVAIREYLEIDPRIKVLN
3840 PF02553
(CbiN)
 click to view
Estimated TM-score=0.55;
hard target.		 >Cobalt transport protein component CbiN (Length=67)
NLIIIALVILLAVLPLFLNKGAEFGGADGQAEELITEINPDYTPWFSSIWEPPSGEIESLLFALQAA
3841 PF02505
(MCR_D)
 click to view
Estimated TM-score=0.55;
hard target.		 >Methyl-coenzyme M reductase operon protein D (Length=148)
EIEIFPHRYLKASTTEKFLNKLYDLKTVERVVIHGQPLPKVVTYGPARGLPVNHSERKIINVKGVPIELTVMAGRFIVTL
SDDSELEKIKKICEEMFPFGYDIRVGKFLKDRPTVTDYLKYGEDGVYLINEMDRRLIGMVDPRSKLSS
3842 PF02079
(TP1)
 click to view
Estimated TM-score=0.55;
hard target.		 >Nuclear transition protein 1 (Length=51)
STSRKLKSHGMRRGKNRAPHKGVKRGGSKRKYRKGSLKSRKRCDDANRNYR
3843 PF01998
(DUF131)
 click to view
Estimated TM-score=0.55;
hard target.		 >Protein of unknown function DUF131 (Length=59)
GIIKSSKKERNENQREETKTEYGGVIFIGPIPIVFGSNKDMAKMALIIGVIMVVLIIAF
3844 PF01710
(HTH_Tnp_IS630)
 click to view
Estimated TM-score=0.55;
easy target.		 >Transposase (Length=118)
MAYDLDLRIKVIDFIESGGGITKASKIFKVGRATIYRWLGREELGATKVETRQRKINRKELEEDVKNNPDMLLKERAKKF
GVTPASLCYQFKKMKVTKKKNSYFIKREMPKSEQNIRK
3845 PF01384
(PHO4)
 click to view
Estimated TM-score=0.55;
hard target.		 >Phosphate transporter family (Length=332)
IGANDVANTFGTSVGAKVLTLRAACTLASICELAGSILLGGNVSSTIKDGIVDTGRFNNTLDGPRLLMQGACIWMLIATF
FRLPVSGTHSIVGATAGYGLVHFGLKGIKWMGLLKIVVSWLISPILSGAVSFFIFLFIKRFVLSKEKPLEPALRSLPFIF
ACTIIFAESAIKTDRPEEAKVFSYAQILTATFGSFVHGGNDVSNAIGPLIGLWIVSTTGSVTIDKNTPIPLLIYGGAGIS
VGLWVWGRRVIQTIGEDLTSMTPSSGVSIELGSAVTALVASKAGLPVSTTHCQVGSVVAVGLARSRKDVNWKLIISIFVA
WVVTLPVSAGIS
3846 PF18870
(HEPN_RES_NTD1)
 click to view
Estimated TM-score=0.54;
hard target.		 >HEPN/RES N-terminal domain 1 (Length=126)
NYQDGYCDYCGKELKVVPLESLMEFIMDGISNFYEDAANFMSYNSREGGYLGEIYTPDELIQEHIELNAEPFEVIEDVVN
SIEDIAWAQPDLYYDNIKDDLEFQWNYFKEIIKHKSRYLFSSGDSS
3847 PF18860
(AbiJ_NTD3)
 click to view
Estimated TM-score=0.54;
hard target.		 >AbiJ N-terminal domain 3 (Length=164)
VSEVTRRNILDELYSRGKITGKYDLIEFLNRIWNLEQMPSSDSRFKTASGDIWQHMINNSDWDEVYLFERYLELVTSADE
TFIKFLEQVVHPLIREQDEQDDYINFINKHLSNDGYKLFLADNISGYPVYKVMKLEVGVKGKVKNLIFAAIGHKPEIIFS
DSIN
3848 PF18809
(PBECR1)
 click to view
Estimated TM-score=0.54;
hard target.		 >phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1 (Length=111)
AFYREDLGYIDLVWGSVEGKGKEVKGLGLSKIIEKHIEDFKDFEGATPQEKLASGLNEIIKNGEFKAQENTSATIKYTKD
GHLFRVGLRQNWMGEPTRNKWVITAYKDERE
3849 PF18718
(CxC5)
 click to view
Estimated TM-score=0.54;
very hard target.		 >CxC5 like cysteine cluster associated with KDZ transposases (Length=117)
PRSIYPLQHHCINPNCQRTQKGLALKKAEQRQAVLYMLDSGPIPVWSVHLYCEKCKVNYHSNFHVHQGKRVYYGGIPDVI
QVGEHQFVEHKVVELWVTLMVVSWTSATNCTRFYNTA
3850 PF18399
(CLIP_SPH_Scar)
 click to view
Estimated TM-score=0.54;
hard target.		 >Clip-domain serine protease homolog Scarface (Length=67)
GCAAAMKCVTEEFCSVDGVMVNTPVRLSPYEKEHLRVPLMECTNSETNQVGFCCRDPLYEDPWPADM
3851 PF18153
(S_2TMBeta)
 click to view
Estimated TM-score=0.54;
hard target.		 >SMODS-associating 2TM, beta-strand rich effector domain (Length=180)
LAVLSILLAWLLSSILSYLSISIPWMIDAPSVVGFYGITYVLFDRYLWKMPFFRTIRLVNIPDLSGTWQGYLVSSYDEHA
KQHETTLLISQTWSKISIILRTKHSSSRSMMASIEGGDPNVIRLMYGYLNEPNPESASTMVIHLGTACLKMHNNSPDQSL
DGEYYAGRGRMNYGGMHFKR
3852 PF18095
(PAS_12)
 click to view
Estimated TM-score=0.54;
easy target.		 >UPF0242 C-terminal PAS-like domain (Length=152)
IPEATILLKKCITMAQKLTGANYYSNEATRYREFSSSNYAIDQRRLFDGLRNEEGGLIVVYSQKEHKLLFANHQSKALLG
WSPDKFTSDFSSIIQEGLADWKRGLNTLSSATESQIRLLAKNKNGQEILLSCHLGIVPSGLFRNYIIGVLYP
3853 PF17712
(DUF5557)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Family of unknown function (DUF5557) (Length=90)
MGAERVCTKAPEITQDEAEIYSLTNMEGSIGIKGCEFKSWLFKFYQARSQVLLCGEVKNLYLLTSNKTTVKEQNACLTHP
DRSAMAGLLL
3854 PF17647
(DUF5518)
 click to view
Estimated TM-score=0.54;
hard target.		 >Family of unknown function (DUF5518) (Length=116)
WKYAILGGVASLPFTAASYWQTGSRVSLVSVFGGGLLAGYFQARDTGTRDHVGARAGLIGGLPILVMLFDMLRFTFESSN
PLWFSVAAVLMTLAFAVLSFGLAALTGELGAIVGNK
3855 PF17597
(DUF5493)
 click to view
Estimated TM-score=0.54;
hard target.		 >Family of unknown function (DUF5493) (Length=82)
MSALGDVIYILGFLFPALGLISRNYLVNLMAFIIGTVAFLVFVQGYTDIAFSSSTFYLGVLPLLLGLVNLGYFFNWLREE
RI
3856 PF17521
(Secapin)
 click to view
Estimated TM-score=0.54;
hard target.		 >Honey bee peptides (Length=45)
VSNNMQPLEARSADLVQEPRYIINVPPRCPPGSKFIKNRCRVIVP
3857 PF17491
(m_DGTX_Dc1a_b_c)
 click to view
Estimated TM-score=0.54;
trivial target.		 >Spider Toxins mu-diguetoxin-1 a, b and c (Length=55)
AKDGDVEGPAGCKKYDVECDSGECCQKQYLWYKWRPLDCRCLKSGFFSSKCVCRD
3858 PF17472
(DUF5425)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Family of unknown function (DUF5425) (Length=76)
CDLSINNDRNKIDGASHFKKKYMDNLNYQCLSKKESEAKNSQIKLDENNNKNHFYSSRVSNVSNYYDRTHISCKKN
3859 PF17452
(YnfE)
 click to view
Estimated TM-score=0.54;
hard target.		 >Uncharacterized YnfE-like (Length=78)
EILKQYMVLYKKMSNMINGPDYPGKEKDIQHQKDQIEVYEKQLQQGFSTDYDYDVFADSVIKCAYGDITLEDLEAVYY
3860 PF17393
(DUF5402)
 click to view
Estimated TM-score=0.54;
hard target.		 >Family of unknown function (DUF5402) (Length=120)
AEKLLEDRKKLEERLRRLTGGANVFVSEADLFAMSCGCIGIISYIQGMQFEDVEIYHEELMNIIEELSLDLGIYPSVSYA
QMKPGTFDLERLQAHDLCDNCQKEYAGVGGKPWPDILIFK
3861 PF17356
(PBSX_XtrA)
 click to view
Estimated TM-score=0.54;
hard target.		 >Phage-like element PBSX protein XtrA (Length=66)
MRLKELKINPSTMRLEIDIMEQKGSFAIVVCDGKAKLTELPPHGETKIITHQGKVKRVKFDEGEEF
3862 PF17347
(DUF5377)
 click to view
Estimated TM-score=0.54;
hard target.		 >Family of unknown function (DUF5377) (Length=95)
MTVQTEVLFSNNWNVRISDPGEEGAHSHFFETIYITLVAHIDGSNISYEFTRKVEEQVKIHRTFTDLSELFKFLGDYLDP
VSMGFLGIKIGNLGV
3863 PF17345
(DUF5375)
 click to view
Estimated TM-score=0.54;
hard target.		 >Family of unknown function (DUF5375) (Length=106)
KECHLTPALKAALYRRAVACAWLTLCHEQKRYASLTLARLEHAIETELEGFYLRQHGRQRGQEIACALLADLMAAGPLKA
APCLSFLGQVVMDELCGRLKDVPVLH
3864 PF17339
(PH_15)
 click to view
Estimated TM-score=0.54;
easy target.		 >PH domain (Length=105)
SMDELCREPGAMCGYVEKALALSNWERRLAVITRDGKLVIYKYYLLDICPGEPLMGKTYQLNKVKYLHLERFENGDIISR
IKTMDGKRVKLKLTGEYATAWAAKI
3865 PF17301
(LpqV)
 click to view
Estimated TM-score=0.54;
hard target.		 >Putative lipoprotein LpqV (Length=113)
PPADKTSAETSSEETPTVAPGSVAVSPGGVTTAVGAPADSTEDEYFKACTSARQWMDEQGGDPKSQIEPYLGMLQTSDSA
GPGTYDTPWTQLPPPRQAAVIVAVQAAADGLCG
3866 PF17240
(DUF5313)
 click to view
Estimated TM-score=0.54;
hard target.		 >Family of unknown function (DUF5313) (Length=123)
DRPNLLQYIAYSYGRRLPDSMREWVAHDLADHGAVRRHMIRMAIPPALVLAPFWLLPASLYVHIEMTVPIYIWSLLMALA
LNKVWRRHRLAQHGLDPNLVDEIRYKKQAHIHEDYIRRFGPRP
3867 PF17114
(Nod1)
 click to view
Estimated TM-score=0.54;
easy target.		 >Gef2-related medial cortical node protein Nod1 (Length=145)
MVCLSTSIAENPYQSLSLESVPSKILFGSFLFYVKDRIPEKAGYIIEEQFCKRLQQIDYDAYSFSPKECNEKLKNIFSEF
SQMKLKMLSVFFSIVQILLPKLSGDYQEHVQFFASISAVVAPRGYVFEIYHAVEHLSLEAREVFQ
3868 PF16974
(NAR2)
 click to view
Estimated TM-score=0.54;
hard target.		 >High-affinity nitrate transporter accessory (Length=169)
KQTLLINSSPSQGQVLQAGEAQVTITWSLNNSYPTGTDTNYKTVNVKLCYAPVSQLDRGWRKSNNNLKKDKTCQINLVTM
PYKPSNNNFTWTIHKDVPTATYFIRAYVYDSTGEVVAYGQTTDAHKKTNLFKITAITGRHITIDVCAACFSVFSIISLVG
FYFVEKRKA
3869 PF16949
(ABC_tran_2)
 click to view
Estimated TM-score=0.54;
hard target.		 >Putative ATP-binding cassette (Length=545)
LLSGSLLRCLMVLACSAVFWTVLFGIFFEGFMFVGMYVDLKNTIIEHLFSMFFLSLLIMLFVSTGIIVYAGLFQSREAAF
LLTTPASTDRIFVYKFFEAIVFSSWGFLLLVSPMMVAFGITVIAKWSFYAIFLVYLLSFVMIPGSLGAVAAILVANFFPR
RQKTVLILGGGLILIGAAFVVTQITTTPGSALSTDWLGGLLGRLAFSQHPLLPSRWMSAGLLASARGNWSDGLFYLMVLT
AHAGLFYLVATVVARDLYRQGYSRVQGGRSSRRRSGLYWIDALFHRLFFFIPHPVRLLILKDLRTFRRDPAQWSQFLIFF
GLLAFYFLNIRRLSYDVQSPYWRNLVSFLNLAVTALILSTFTSRFIFPLLSLEGRNFWVLGLLPLKREAILWGKFAFASG
ISLVATEVLVVLSDLMLRMSTAMIALHMGMVAILCLGLSGISVGLGARLPNLKETDPSKIAAGFGGTLNLLVSLVFISAI
VTALALPCHLYFAGQDASEFRTFVLSEERFRFWMAIAVVTSLVIGAVGTFLPLRIGIKAFKRMEF
3870 PF16825
(DUF5075)
 click to view
Estimated TM-score=0.54;
easy target.		 >IGP family C-type lectin domain (Length=173)
YFVSYKNAEAYCVDNGAVLPADQTEAAHQSLQSAIKRVITGSDAFSYLGGDAVYSSGEAIEADKRCKPGDIASSRYCVYR
WNKGLFAKALPDGQGVAFWRGSYIKYDGAASMNGYPSFWGGEYPKRGQLYTLSWYHTGDDVTTWYDGKDMSGRIKWASDN
PDTKTENYVILCE
3871 PF16633
(APC_u9)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Unstructured region on APC between 1st two creatine-rich regions (Length=88)
SAEDEIGRDQSTRVTDANNTLQIAELKENSGALSTEGAVSEITSTSQHIRTKSNRLQTSSLSPSDSSRHKAVEFSSGAKS
PSKSGAQT
3872 PF16632
(Caskin-tail)
 click to view
Estimated TM-score=0.54;
easy target.		 >C-terminal region of Caskin (Length=63)
RQKLEETSACLAAALQAVEEKIRQEDAQGSRSSAAEEESTGSILDDIGSMFDDLADQLDAMLE
3873 PF16631
(TUTF7_u4)
 click to view
Estimated TM-score=0.54;
hard target.		 >Unstructured region 4 on terminal uridylyltransferase 7 (Length=88)
RRKVRRRRDQEDTLNQRYPENKEKRSKEDKEIQNKYTEREVSTKEDKPMQCTPQKAKPVRAAVDLGREKILRPPVEKWKR
QDDKDLRE
3874 PF16624
(zf-C2H2_assoc2)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Unstructured region upstream of a zinc-finger (Length=95)
SKREKGPNNTANSSEIKVKVEPADSVESSSPSITHSPQNELKGTNHSNEKKNTPATQKNKVKQDSESPKSASPSAAGGQQ
KARKPKLSVGFDFKQ
3875 PF16611
(RGS12_us2)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Unstructured region between RBD and GoLoco (Length=72)
PSRGKDKQKSAPVKQNTAVNSSSRNHSATGEERTLGKSNSIKIKGENGKNARDPRLSKREESIAKIGKKKYQ
3876 PF16605
(LSM_int_assoc)
 click to view
Estimated TM-score=0.54;
hard target.		 >LSM-interacting associated unstructured (Length=61)
NPPRRSVPDKPGSSRSTGDMMPRQVYGARGKGRTQLSMLPRSLHRQNAPVGKVENGTAAEQ
3877 PF16594
(ATP-synt_Z)
 click to view
Estimated TM-score=0.54;
hard target.		 >Putative AtpZ or ATP-synthase-associated (Length=53)
ICVWSFLVSMAGGLLLLWWDYEYHPTNSQLWLVPFGLILFVTPVIACFAVVVS
3878 PF16476
(DUF5053)
 click to view
Estimated TM-score=0.54;
hard target.		 >Domain of unknown function (DUF5053) (Length=59)
QEVAEIVSLSYLAKKYFNKSRSWLYQRLNGNLVNGKPARFTQEELQTFNNALQDISKKI
3879 PF16428
(DUF5025)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Domain of unknown function (DUF5025) (Length=160)
VQFIKMQIAGQSLEIKGSIDQNRNIFSGSWTGIGYGDGTQKEMYTVNVTVPKTFLNTTTDSKFQVRIFDIEKKEYLLSDS
DPYKQSFASSIYLVTNLGSADSKVYTTNETKPPFKVQITRYEKPKDSGVPFVGGKLNGTLYNIKNLQDSVVIKDGVFDVR
3880 PF16410
(DUF5018)
 click to view
Estimated TM-score=0.54;
easy target.		 >Domain of unknown function (DUF5018) (Length=351)
YLLLGVLALMSSCQDPEYVLPTAERQGITSLTALFTSGPYVDKEAVVYTIADASVDKYVIPIPWFYPEDSENETAEYMKT
MRVQAKLAPNCTINPVLTILDLTKENYFTYTDAQGYKKQICITGERVKSNKCQLLSFSIPAEDISGIIDEEHKTVSLISA
EDLSSCLAEYSLSSHATMSPDPKTEALDFNSPVELTVIAHDGVTKQTYTVQKAVPDKIPYGYRKGSETELFKLDMGVIGL
PWTSANSPSLAVNGNNLVVCLGDGSTAPTYYNASTGSKIGNMTLGSVGVASLGCVTSDSKGNILLATKAANGKSFSIYKT
SSVTTVPTLLISYTNNTSLDMGTKVSVQGDI
3881 PF16386
(DUF4995)
 click to view
Estimated TM-score=0.54;
hard target.		 >Domain of unknown function (Length=72)
MKKKLVLFASVAIALASCQTTPKEDYSWIKKGLDVASAQLQLTAEEIDGTGKLPRSIRTGYDMDFLCRQLER
3882 PF16372
(DUF4984)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Domain of unknown function (DUF4984) (Length=164)
LYKDYTHVVMQKACPFDIHNFSGWCMVTSTFYSQYLNNVTNRLIKTEVVEGEENTVLLKDVYYKGYDLKLKFKTGNLLEP
KVEMDDQIAGETGEAFGTIYGDGKLRISQPSLYTSYYNTCQNYVLQYVNMSVNKKDGSLYGNVGTFITMFEWVSDAEAEK
LKEQ
3883 PF16301
(DUF4943)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Domain of unknown function (DUF4943) (Length=150)
DYNNPDVDLFVRQLKAGNYNTKSPKGFVEVPKFTEKDIPTLLNYAEDLTLITSFPLPPVSAYYSGKVRLGECMLWVVETI
RLGHYASFGCKMVRANAENYEGIYFLTDEELLDAAARYRRWWENRQYPRTAWTIDACFDEPLCGSGYRWW
3884 PF16270
(DUF4923)
 click to view
Estimated TM-score=0.54;
hard target.		 >Lipocalin-like domain (DUF4923) (Length=173)
LKDLFNKENVEKVVSAVTGKNTVDMTGTWSYTGAAIEFESDNLLMKAGGAVAATTAEAKLNEQLSKVGIKPGQMSFTFNA
DSTFNAKLGTKTLNGTYMYNATEKHVTMKFVRLINMNAKVNCTSGSMDLLFESDKLLKLITFLSSKSSNATLKTISSLAN
SYDGMMLGFSLEK
3885 PF16200
(Band_7_C)
 click to view
Estimated TM-score=0.54;
hard target.		 >C-terminal region of band_7 (Length=59)
IVSQAIQESGGMEAVSLRIAEQYIEAFGKLAKEGTTVLLPSNAAEPANMVAQALTIYKN
3886 PF16098
(FXMR_C2)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Fragile X-related mental retardation protein C-terminal region 2 (Length=90)
GYKGNEEIQWNESRARNSRDPKPRQQEDSLQIRIDSNNERSVHTKALQSSFADSGTSNSSSRPRPGKDRGPKKEKQDSLD
APRVLVNGVS
3887 PF16082
(Phage_holin_2_4)
 click to view
Estimated TM-score=0.54;
hard target.		 >Bacteriophage holin family, superfamily II-like (Length=76)
MKTETIDALATAGGRTSGGGAVVGFLGWLASSQAIGLFGVCIALLGALVSWYYKREANRRLAAEHALRQQERQMRI
3888 PF16044
(DUF4796)
 click to view
Estimated TM-score=0.54;
hard target.		 >Domain of unknown function (DUF4796) (Length=190)
GILCFQHCDKKVFCFELPNLCPVCKKNLSTEQFKLLPIRIPYPFVRAAQHPCSILIKPTSGDFLNDYFNSVDLHIGVTDS
TGAVVEYDKNGLQRQKNNSWNQCLVLDGMDEPWADQWDEALKAVIKEGHWTPQMYNENSYNCYTFVLAFLKKLKHDLLSN
AAYSSTYFCEKFILPRTTAAGKYISLYRKL
3889 PF16025
(CALM_bind)
 click to view
Estimated TM-score=0.54;
hard target.		 >Calcium-dependent calmodulin binding (Length=78)
LNSKSRFHLDGQPILAPLMTASKVNEMQMARQMAMQIEARLTATAEADATDDDDEDNSSMEGRRSFPKLEQTKTYIYD
3890 PF15990
(UPF0767)
 click to view
Estimated TM-score=0.54;
very hard target.		 >UPF0767 family (Length=83)
MLPVIFTFLRTYAPYVTLPVAAVVGFIGYNLEAILSDKYTPYQKSIEEKREDRLMEENLSKDVTKVDSLKERKFVPRSVF
EKN
3891 PF15980
(ComGF)
 click to view
Estimated TM-score=0.54;
hard target.		 >Putative Competence protein ComGF (Length=96)
NVKQVKQQENQDWLLFVQQMEAELEGCQFVKVEGNKLYVKQDNQDLAFGLSSATDFRKTNADGRGYQPMLFNVKSSTISQ
NNQIVTIQVTLKNGLQ
3892 PF15845
(NICE-1)
 click to view
Estimated TM-score=0.54;
hard target.		 >Cysteine-rich C-terminal 1 family (Length=90)
SAKGFSKGSSQGPAPCPAPAPTPAPASSSSCCGSGRGCCGDSGCCGSSSTSCCCFPRRRRRQRSSGCCCCGGGSQRSQRS
NNRSSGCCSG
3893 PF15825
(FAM25)
 click to view
Estimated TM-score=0.54;
hard target.		 >FAM25 family (Length=65)
AVHAVEEVVKEVVDHAKQVGEKAIADALKKAQESGDKVVKEVTETVTNTVTNAVTHAAEGLGKLG
3894 PF15749
(MRNIP)
 click to view
Estimated TM-score=0.54;
hard target.		 >MRN-interacting protein (Length=104)
VLRCFSCETFQVHQVKKSNKWNCKLCGAKQSVRKEYGRGSGADCRRHVQKLNMLRATMDSAPSTCEDTDVSEQDPEWQQD
TEDATDPQYNYTDDSQKSSKWEKF
3895 PF15689
(NRIP1_repr_3)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Nuclear receptor-interacting protein 1 repression 3 (Length=88)
VKIKSEPCDDLHIHNTDVHLSHDAKGAPFLGMAPPVQRSAAALPAPEDFKSEPISPQDFSFSKNGLLSRLLRQNQESYLA
DDLDNSHR
3896 PF15615
(TerB_C)
 click to view
Estimated TM-score=0.54;
hard target.		 >TerB-C domain (Length=155)
PATAVKGATQPANGGFTLDHERIAQLQRETAAVSALLAQVFTEDQTDDHFSDSPISSAPSNDSESAACIEAGRVDEQVTS
SDIPGLDLEHSAFLRLLVSRTEWSRSELEEAASDMELMLDGALEQINDMGFDRFNMPVTEGDDPVEINADILEEL
3897 PF15531
(Ntox27)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Bacterial toxin 27 (Length=130)
LGINPHSDDLTKLAGGPGGRTFNNQDYGIQLPKSMGLGERPIWTVGVEQAVANRNVRISVSLDGVPGATNADEALNALLK
RGEGITPGDWETIRQRGMGTAWEMTKLRSAVRMEDRGWKSIDWWMTNSKG
3898 PF15448
(NTS_2)
 click to view
Estimated TM-score=0.54;
hard target.		 >N-terminal segments of P. falciparum erythrocyte membrane protein (Length=50)
MDKSSIANKIEEYLKEKSNDSKIDQSLKADPSEVQYYGSGGDGYYLKNNI
3899 PF15446
(zf-PHD-like)
 click to view
Estimated TM-score=0.54;
hard target.		 >PHD/FYVE-zinc-finger like domain (Length=164)
CHTCGGSRQRGQLLYCQGCCLAYHKNCIGYRSNREHLATKVGEDDFVLQCRFCLNIYSKKDSSAPRHSACQQCKKDGRSC
TPFSQKKTARQEEKLRAENGGVDPVTPVSPQLINNPDNVLFRCSMCHRGWHVEHLPPTGTDAIETDVKSERLKEYSVDWR
CTDC
3900 PF15382
(DUF4609)
 click to view
Estimated TM-score=0.54;
very hard target.		 >Domain of unknown function (DUF4609) (Length=68)
EKPDVKQKSNKKKFVIPQIIITRASNETLISYCSTGNEEQRTIREQADWGPYHRHRNPSTVAAYDLHT

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