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Modeling of Pfam protein domain faimilies by C-I-TASSER (Page 36)

Search by Pfam ID:

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# Pfam ID C-I-TASSER models ranked
by estimated TM-score
(click to view)		 Full name and representative sequence
3501 PF12292
(DUF3624)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF3624) (Length=75)
MSCDDCKTSIFRQKIGRCTRCMWQLTALSVISWPLWWFLYRDTPREVNSIALLFFCSAFSGLLALHLIVLAYRRL
3502 PF12277
(DUF3618)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF3618) (Length=46)
ARSPEQIEADIAATRARLASTVDELVDRAHPKNVAKRQVEQAKAQV
3503 PF12223
(DUF3602)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF3602) (Length=77)
NMAADDTKYVDGEVVRAGPEGSHGTGAFSSGRGGAGNIADADSQPAPRADKDIVPEEACRPSTEGQDYHVGRGGAGN
3504 PF12158
(DUF3592)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF3592) (Length=135)
LILAVLLIGTTVAGAVLYELDVREAGNLRSKWPTTQGTILSSTILRDFENSETAFIIIRFAYEAKGTRYSAQQAWREWLT
RTHQYSEGSSVTVYYNPAKPSEAVIEPREQSPGSSLIGFGLFAMALVAIIAGIWI
3505 PF12156
(ATPase-cat_bd)
 click to view
Estimated TM-score=0.56;
hard target.		 >Putative metal-binding domain of cation transport ATPase (Length=84)
SCYHCGLPVPSGSEFYAAILGQRRRMCCHGCQAVAESIVDNGLEDYYQHRTELPQTAEELVPEELRQLELYDHPEVQKSF
VHDE
3506 PF12089
(DUF3566)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Transmembrane domain of unknown function (DUF3566) (Length=117)
PRRASLQVKRVDPWSVLKLALVLSVALFFVWLVAVGVLYGVLNGMGVWDKINNTANDLLQSEEASGDPLISAGRVFGVSA
IVGAVNIVLFTALATVGAFVYNVSADLAGGLEVTLSE
3507 PF12078
(DUF3557)
 click to view
Estimated TM-score=0.56;
hard target.		 >Domain of unknown function (DUF3557) (Length=141)
TKKLFIYYLRGKSDIHVDKVLFNGVRNLENVQVKISMTVNKLSAHLCNIADFHMVISLKSPLQELYLTNQVIILDHPIVY
TARSLILKTNKRGIRVPGIEKLPNKKVLVHECSNIEILVLRIINYWIENGKEVGTEYLFQL
3508 PF12046
(CCB1)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Cofactor assembly of complex C subunit B (Length=169)
ILPSTFLLTLLLSVGLFFFIRASTKERTQTAQLISEQDEASLMPQLQEYFRSRSYRVAALDREQNQVTFEGFVQPSWFLA
VFLTLLAAIGLLCLSLVLAILFPSFGTLFLGLILLSPLSGIFYWQKAGRLEKVSLKLETIPNQQHSSSTITVTGHRDELT
ELQKALQLK
3509 PF12028
(DUF3515)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Protein of unknown function (DUF3515) (Length=154)
ALAIVLVVGVLGGAKLVYDRVAHRPVAMTSANSPEAESSECASLIGALPHKVLGHKRAELADPAPAGAAAWQSDSTHRVT
LRCGVNLPLQYTQLSELSLIDETSWLEVRDTTPGSTFRTWYAVDRFPVVALTADDAGLGKATSPIQELSSAVAS
3510 PF11880
(DUF3400)
 click to view
Estimated TM-score=0.56;
hard target.		 >Domain of unknown function (DUF3400) (Length=45)
SRYNDDSGTTADYIVVEMAKHLLGENWMPDYVKRANDGGIERVLV
3511 PF11877
(DUF3397)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF3397) (Length=111)
MLFWYIFPVIVFFACNFLVSTFSLTERWKIKAPDLAIPFLFIGIHELSKDSYDESIMPYFVISILLLGVAVALFQAYYYG
EILYRRYFKMFWRLTFLLTFVLYVLLILLNI
3512 PF11828
(DUF3348)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Protein of unknown function (DUF3348) (Length=245)
MVQAPQRTAFSGPTLIRLLARLTDVDVPESTQSLSDRLSQWLGWTDAIALSSALNGAPPAVASGARAFGNAEENECARVR
TSLAHAIAGDSAFAGARRRGPARAPVQGAPADAAVDYAVFRQRYLSLQQEMETGIGNLRGRLRQILAARTPAMTRLAVMD
AVMERALSPREQNLLAAVPGLLAAHFERLRQAGQDTPADAQASGDAAAVTPGAWLDVFRKDMQSVLLAELDLRFQPVEGL
LAALR
3513 PF11739
(DctA-YdbH)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Dicarboxylate transport (Length=193)
TDPEGQLTLWQDKNNPSLVSLSEFSAGLMGGSVSIDKVDYDMGKQTAETVLVLDSIPLQKLLDLQGMKKIFATGTVAGKI
PLIMKDQKFEIPAGKMDALQNGQIIYTTTPEERVAANESMRITYEALSNFLYSELISSITMAPDGQSLIRLQLKGTNPSF
QEGRPVHLNLSVEQNLLDLFRSLSISTNIEEAI
3514 PF11732
(Thoc2)
 click to view
Estimated TM-score=0.56;
hard target.		 >Transcription- and export-related complex subunit (Length=76)
LGKLCHIHPITVFDYLLSQVQTFDNLIQPVVESLKFLTNLEFDILTYCIIEQLASPDKQQLKASDGKLSPWLQALA
3515 PF11676
(DUF3272)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF3272) (Length=61)
TKRQFIFMALLCSFETYFFNQSIMDGSWIFAIFWGVLLLRDLQKVYAISKFTKELIKSTKK
3516 PF11673
(DUF3269)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF3269) (Length=73)
MPKEKYYLYREDGTEDIKVIKYKDNVNEVYSLTGAHFSDEKKIMTDRDLKRFKGAHGLLYEQELGLQATIFDI
3517 PF11455
(DUF3018)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF3018) (Length=63)
ERVKKHRDALRRRGMRPVQIWVPDTRRPGFAEECKRQSLLVKNDKQEKDVLEFLDEAADREGW
3518 PF11307
(DUF3109)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Protein of unknown function (DUF3109) (Length=181)
MIQIDNVVVSLDVLREKFVCNLDACKGECCIEGDAGAPVEPEEVEKLEEVLPVVWDELSPEARAVIDKQGVVYTDRDGDL
VTSIVNGKDCVFTCYDEKGYCYCAIEKAYRGGKTDFYKPVSCHLYPIRVGNYGPYQAVNYHRWDVCKAAVLLGKKENVPV
YRFLKEPLIRKFGKEWYDELE
3519 PF11291
(DUF3091)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF3091) (Length=100)
IGYLSDELKKNYPNYSANVLEEVNRCGVTLKQFFNELESKENRGTCNLPKNIHWKDLLNLQSIIWAQQTDLVDINVYELK
KHYFSQLMRNLKNLANKRSV
3520 PF11242
(DUF2774)
 click to view
Estimated TM-score=0.56;
easy target.		 >Protein of unknown function (DUF2774) (Length=64)
MRTEVVVFTLHESGKSFIEIARELNLQAKDVAVLWARAMTAKNKFETREKVVYRKRHINKKVKN
3521 PF11240
(DUF3042)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF3042) (Length=54)
MKHFTKGFLFGVVATASAVAGAVFSFKKKVVQPIEEQEERFEENRKRANRKSHS
3522 PF11239
(DUF3040)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF3040) (Length=84)
MPLSEHEQRLLEQIERALYDEDPKFASTVRGGKLRRPSRRRRIQGIALFVIGVVMLVLGVVFSSSTVGIVVSVVGFLAMF
GGAV
3523 PF11220
(DUF3015)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Protein of unknown function (DUF3015) (Length=140)
ADAPGSDGCGWGNMLFKGQRGTATHVLAATTNGTSGNNTFGMTTGTNGCHTNGALTYGGKPMIVLSSMMDELSEDMAKGD
GEALTTYAVVLGVKPEDRAHFAQVTHEHFAQIFNKADVTAEDVYANTQAVLKQDSTLAKY
3524 PF11214
(Med2)
 click to view
Estimated TM-score=0.56;
hard target.		 >Mediator complex subunit 2 (Length=99)
HENKLTQCFNDIMRVAVEMMLHQQLKTVQLDSSVVNGFSHNQQRILSEKIHIFHAILDDMETTLGKSKNYVEAIYELGRE
KELQKEREREELRKRQEEE
3525 PF11034
(Grg1)
 click to view
Estimated TM-score=0.56;
hard target.		 >Glucose-repressible protein Grg1 (Length=67)
METVKNAANYVAETVQGAGATASKEANKEVAKDNNASLGTRLSAGKDAVGDKFDETKHNTQADVHKE
3526 PF11016
(DUF2854)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Protein of unknown function (DUF2854) (Length=146)
VGFIAYATGNATLNLAGLFYGVPILLGGLALKSAELKPVPYSQPPSSEILALREQQATTTQNQIRKDVTRYRYGQQAHLD
ESLQRLGLSPIDEERPVLVSLQETSINGAYALILEFESPFISLEQWQEKQEKIEKFFGPGIRAQIT
3527 PF10975
(DUF2802)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF2802) (Length=68)
GMGRRVIELEKRLHQQSERIEESTQQDPQAKLYTRAMKMVALGAGVDELIKECELPKAEAELLIRLHR
3528 PF10936
(DUF2617)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function DUF2617 (Length=162)
TTLKTAYTDTRASDLAWALGREPLPALAVLDLQLHGAQVQLRLLGASHQVLLEEEHGTCSETVACMPGSSTPLPLGVAKR
LGDWEYEFAAHVETLSRGSFAGRAQELLALVAEHPHGLAGTFPGSPHAFTAMLAQCQQGQVRWRTWHAYPQEGRLVATRT
RV
3529 PF10924
(DUF2711)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Protein of unknown function (DUF2711) (Length=216)
DKSPILEQLPRNFKSAAILLHPFIQMPLGWEKSVRKRPYEHIYPSAEEIIYNGKSVSWKEMMSCSGLHSYADLAMAMLTS
ISALSEEYKREDLAEKLHSNLKKDLYYPTEDYTSIFLLHKLLKLLGSKGAKNLYFSEPILDTNGLLQVNNTTPLDIWDIS
NNELIITGEDNEYAFMSIYDSFTTLLLAKEENIEYIVHSMNVEAIICDKKTMIDWY
3530 PF10886
(DUF2685)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF2685) (Length=55)
MAHCVVCKQPIKEGDVTIDTPQGTVHAGQCQQHLAEMAISESGGDQQLVETQLLN
3531 PF10879
(DUF2674)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF2674) (Length=63)
TRRITKKMMSFDGSKKDFAEISNELEKGWYIVNIKPYGEAFLCVLEKNMDNHDNNTIQNLKLQ
3532 PF10796
(Anti-adapt_IraP)
 click to view
Estimated TM-score=0.56;
hard target.		 >Sigma-S stabilisation anti-adaptor protein (Length=87)
MKNVIFSMLAKISKMDAESKQLTAQVEAQSLLIGALTLTVGKNGGMTRMVESVNKAINSVLDSQDDVLRSDADILLNEFR
NLLEVTR
3533 PF10777
(YlaC)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Inner membrane protein YlaC (Length=153)
MNTIKQILIQDLERINIEEQRDGKPRFNRQFISNHPYLCLAMFVSYLFLAALIWYTPYFSLLSLLAFTVLFIIMSAVLLF
EIKPVYRFDDIGVLDLRVCYNGEWFVSEKISDCAIKELCSHPHVSLTIKDEIKRIIQTKGEIHFYDVYIMAFP
3534 PF10769
(DUF2594)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF2594) (Length=74)
MSETDFSTSEEVQALANEVTCMKALVTLMLKGMGQADAGKVIINMERYIAALEDQQQAEVFSNTVKQIKHAYRQ
3535 PF10762
(DUF2583)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF2583) (Length=88)
MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQLNLPQFFAHGAILSIFVGAVLWLAGARIGGHEQVSDRYWWLRHYD
KRCRRNQH
3536 PF10761
(DUF2590)
 click to view
Estimated TM-score=0.56;
easy target.		 >Protein of unknown function (DUF2590) (Length=99)
IDLLITDGDFTLNAGNEPVLCNNRASIGQDCVHAIIESGLTTKLIAERSPTLRADIMTQIIILVEDDERIIPGTVELSEE
TQTRLWVTAETYDFGRIQV
3537 PF10756
(bPH_6)
 click to view
Estimated TM-score=0.56;
easy target.		 >Bacterial PH domain (Length=71)
RLQTDLTSNGVETRGLFRTRRVPWSEVAGVRVPGFGRVHLQTTDGRDIPLPGVDFSRLRSLILASRGHIPD
3538 PF10691
(DUF2497)
 click to view
Estimated TM-score=0.56;
easy target.		 >Protein of unknown function (DUF2497) (Length=69)
DELLSPQAGASVASSFEALTATVGGSQGSRTLEDLVRDMLRPMLKAWLDDNLPALVERLVRQEIERVAR
3539 PF10690
(Myticin-prepro)
 click to view
Estimated TM-score=0.56;
hard target.		 >Myticin pre-proprotein from the mussel (Length=96)
MKATILLAVVVAVFVAGTEAHPHVCTSYYCSKFCGTAGCTRYGCRNLHRGKLCFCLHCSRVKFPFGATQDAKSMNELEYT
PIMKSMENLDNGMDML
3540 PF10680
(RRN9)
 click to view
Estimated TM-score=0.56;
hard target.		 >RNA polymerase I specific transcription initiation factor (Length=68)
LETIRARDLAAHLYNAYALRVRARNIARKAAEDDGHRRRNEAEYFAPPKRWTAWPMPAGEVPRLDEHL
3541 PF10676
(gerPA)
 click to view
Estimated TM-score=0.56;
hard target.		 >Spore germination protein gerPA/gerPF (Length=72)
MPAFVGAVKINSISSSGVFHIGDVFAISPHSVAKTFAGAGSFNTGDGLQIYNQYSNTNTHDADVADQNIVGN
3542 PF10439
(Bacteriocin_IIc)
 click to view
Estimated TM-score=0.56;
hard target.		 >Bacteriocin class II with double-glycine leader peptide (Length=65)
FEQFNVMDNEALSTVEGGGMIRCALGTAGSAGLGFVGGMGAGTVTLPVVGTVSGAALGGWSGAAV
3543 PF10279
(Latarcin)
 click to view
Estimated TM-score=0.56;
hard target.		 >Latarcin precursor (Length=80)
IGYAVSEDFDQNEIDNEEARQAFKTFTPDWNKIRNDAKRMQDNLEQMKKRFNLNLEEARQAFQTFKPDWNKIRYDAMKMQ
3544 PF10257
(RAI16-like)
 click to view
Estimated TM-score=0.56;
hard target.		 >Retinoic acid induced 16-like protein (Length=337)
CLEHLLSENLLDKLYEWGIKTGRYANAVRLEQLKLYEQLVSHSRHQLLVHEPFLRPLLKLLASSQNEIYPPDVEKRLVIL
LNQLCVVLMQNVHLLDLFFFSTTQTQQSHHASNGGHTNFIIFSLLIPYVHREGSLGHQARDALLLCMALSQKNSNVGTYI
ATYSSICPVLVTGLGGLYSRLPNQIEIKTVDWYRITTDDVTEMPELTLFMNSLEFCNAVVQVAHTMIRQQLLDFLYQGFL
VPVLGPAILQTNVESQVSAMAYFDLIVRSITEPGLIQIVIRFLLDEEKFDGQRILDVLVERLNSNDSRLCMVTLSLFDSL
LSLNCEDIMLELMLKYL
3545 PF10256
(Erf4)
 click to view
Estimated TM-score=0.56;
hard target.		 >Golgin subfamily A member 7/ERF4 family (Length=112)
VFVQRDYSDGTAVKFQTRFPTELESRIDKHSFETTINKLNEYFAEAEKGTCSTYCEGCLACITAYLNYICTETHYEKCLR
KVSKYIVSQNERIYNPRGLQITDPTYRGLRVI
3546 PF10204
(DuoxA)
 click to view
Estimated TM-score=0.56;
hard target.		 >Dual oxidase maturation factor (Length=275)
FYPQPRHAAGFSVPLLIVILVFLTLAVSFLLILPGIRGHSRWFWLVRVLLSLFIGAEIVAVHFSAEWSVGRVSIDTSYKA
FSAARIRAHLGLHVGLEGINITLKGSPVQQLNETINYNEQFSWRLGKDYVEEYEEALEKGLPDPVLYLAEKFTVSSPCGL
YRQYRLAGRYASALLWVAFCLWLLSNLLFSMPVPLYGGLMLLATGAFALFSVFVFASISSVPLCRIRLGSSALTTHYGAA
FWVTLATGVLCLLLGGAVVSLHYTLPSALRSFLDR
3547 PF10179
(DUF2369)
 click to view
Estimated TM-score=0.56;
hard target.		 >Uncharacterised conserved protein (DUF2369) (Length=95)
ACRGTESVCTVSDLLPDTSYYFDVFVVDTLNGTSSAYTGTFTHTHEEARPVVTPLGEGELRWVALQGSGRQASQFFSFRP
RGWQQSALLTLQSCS
3548 PF10161
(DDDD)
 click to view
Estimated TM-score=0.56;
easy target.		 >Putative mitochondrial precursor protein (Length=74)
ARSGSGQSLVPSRSVIVTRSGAILPKPVKMSFGLLRVFCIVIPFLYVGTLISKNFAALLEEHDIFVPEDDDDDD
3549 PF10129
(OpgC_C)
 click to view
Estimated TM-score=0.56;
hard target.		 >OpgC protein (Length=357)
RDLRLDLFRGVANWAIYLDHIPNNVVNWITTRNYGFSDAADLFVFISGYTASFVYAKMMLERGFIVGGTRLTKRVWQLYV
AHIVLFVIYIVAIGYVAQRFSDPEIINEFNVAGLIANPIETLRQGLLLKFKPVNLDVLPLYIVLMGLFPPVLWLMLRKPD
AVMIGSLVLYFAARYFEWNLQSFPEGTWYFNPFCWQLLFVFGAWCALGGTVRSRSIIDSRGMLWFCLAYLVFALVMTMAG
RFQDFGDLFPRWLYDAFNPNDKTNLAPYRFLHFAVIVVLVIRFVPKDWKGLEWRVFDPLIKCGQQSLAVFCVGVFLSFVA
HFELTMSSGSLLAQILVSVVGIALMTVVAYYISWSKQ
3550 PF10109
(Phage_TAC_7)
 click to view
Estimated TM-score=0.56;
hard target.		 >Phage tail assembly chaperone proteins, E, or 41 or 14 (Length=75)
VTLTRPSEANGVNVETLTLRAPTVRAVRAADRAAKGDAEQRELMMFAGLAEMGLKDLEGLKLADYRRVQAAYSHL
3551 PF10095
(DUF2333)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Uncharacterized protein conserved in bacteria (DUF2333) (Length=330)
WKEKGLWWTLGLFVVTYLVLVLVLGFIWSRSPGDFDVREIALEAANNDQSKLVPGYVTAATAIHTAETLLHKPGGYLSND
VTPPGIYLDNIPNWEYGVLTELRDLVRAMRNDFSRSQTQSVEDKDLQIADPQFNYDSASWILPSSESEYRKGIDALNRYL
ARLADEKAHDGQFFTRADNLSSYLQVVEKRLGSLAQRLAAGVGQTRFNLDLAGDPNAHQSTPTPDQTQFKTPWLKIDDVF
FEARGYTWALLHTLKALEVDFSSVLQNKNAVVSLKQIIRELENTQAFIWSPIILNGTGFGMMANHSLIMASYISRANAAI
IDLRNLLLQG
3552 PF10063
(DUF2301)
 click to view
Estimated TM-score=0.56;
hard target.		 >Uncharacterized integral membrane protein (DUF2301) (Length=135)
VSLVTIHIYLAPLHRLLQIFWGIGCISAIVLAFSSNEPLALYIYNHPISLFGIGFTFAALTGIYFKEAFCFNRLETKFLT
PLVPMLLLGHIVGFWSTDWEMILLGLWAVLFMVFALRKLLQPIPDDIGDKSVFEY
3553 PF10016
(DUF2259)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Predicted secreted protein (DUF2259) (Length=193)
AFGQYGIESGTLKPWADIFVVDVPKNNFVSGGRLSYVHSAPIIQGQDGSGALYSLLSSNGSLFSKYGIDFLRQSRPLYLS
MDSKAGSSSNNTSIEFRDFETGDSYVANIVSLVEGSGDNIQSSFFINLECTKNDGSKKKYVVGTPQLKRPAVQSYRICRV
MIAPKDGSMIFVIEMTKKAISGSDIRYMVEALR
3554 PF09962
(DUF2196)
 click to view
Estimated TM-score=0.56;
easy target.		 >Uncharacterized conserved protein (DUF2196) (Length=56)
FRQVVPGASVFIVLKEDQPTGKETAGKVAQLLTRGNHPRGIKVRLQNGQVGRVQRM
3555 PF09921
(DUF2153)
 click to view
Estimated TM-score=0.56;
hard target.		 >Uncharacterized protein conserved in archaea (DUF2153) (Length=123)
NLDEWIKMQKSLLETIKDMQKNEKDMDRLDLILASRVAFQHMMRTIKAFDQWLQDPMIIKHMPKEMLEDVKNTSWNILQQ
LLELDIRHTSEARELITKLGKEGKLDPLIWSRSVVEEQQNQNR
3556 PF09866
(DUF2093)
 click to view
Estimated TM-score=0.56;
hard target.		 >Uncharacterized protein conserved in bacteria (DUF2093) (Length=42)
VVKPGSYVLCAVTGEPIPLEELRYWSVDRQEPYASPEIATQR
3557 PF09824
(ArsR)
 click to view
Estimated TM-score=0.56;
easy target.		 >ArsR transcriptional regulator (Length=158)
INDPSELVPLLQVFGSKRHKKVFDELLNLWMTKGDLEEVLGTDVTSSISILKKSGLIESQWHMPEPGKTPEKEYRTSYSK
VQTNFQCSFEDMSDIIMLTFMPYEEVQDIIEELENLVEQGNNSMSSLTRALNKSPLYIRAVARRSDKLSVMGQRLKMM
3558 PF09796
(QCR10)
 click to view
Estimated TM-score=0.56;
easy target.		 >Ubiquinol-cytochrome-c reductase complex subunit (QCR10) (Length=62)
AGWTPKTATRVGLTLAGFGASAGFFALFFFSDIPKVRNDIMVKIPIIGDRWRREIPASDNPF
3559 PF09720
(Unstab_antitox)
 click to view
Estimated TM-score=0.56;
hard target.		 >Putative addiction module component (Length=54)
MPIQERIQLVEDIWDSIAELPESVEIPQWHKDELDQRLAAYHANPREGSPWKDV
3560 PF09682
(Phage_holin_6_1)
 click to view
Estimated TM-score=0.56;
hard target.		 >Bacteriophage holin of superfamily 6 (Holin_LLH) (Length=101)
MNDVILQGIMLILTGFAGFIVKTVKDYLFKEGGEKALRIVEIVAKNAVNAVEQIANEDTKGEQKLNAAKTKVKKGLEQYN
IYLTDSQLEMFIEAAVKEMND
3561 PF09656
(PGPGW)
 click to view
Estimated TM-score=0.56;
hard target.		 >Putative transmembrane protein (PGPGW) (Length=53)
RVVLGVFGTAVLLAGILMIPYPGPGWLVVFAGLGILATEFHWAHRVNKFAKRH
3562 PF09579
(Spore_YtfJ)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Sporulation protein YtfJ (Spore_YtfJ) (Length=87)
VETKDGSCIIPISKVSFGFASGGSEFGEANTKVNSNSDYPFGGGSGAGVSVKPVAFLVVKDNAVRLMPVEQDNTYDRIVD
TVPQIID
3563 PF09560
(Spore_YunB)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Sporulation protein YunB (Spo_YunB) (Length=89)
VKVPLGNVFGSQLLAQYGPKIDIKVTPIGMVNVDFKTQFEQSGINQTRHKIYLVVNTQVRIIVPFSSNTTSVETSVPIAE
TVIVGKVPQ
3564 PF09543
(DUF2379)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF2379) (Length=118)
ELDWEPIRALGQRVIERGEPLELSDEVRALLQRSAEEVALSPEDTANALRSVPTATTLLEEITRRIREGSDRFWNAELRA
SDLQDAGDLDGAGRLMEEVLAVEVVPHYRRIAESQLRK
3565 PF09498
(DUF2388)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF2388) (Length=68)
IAGYATSKVTTAPFDRKLILAAHDDAAAFVASDGALRGAQLEAALIALRQHTPELHASDLELAQAILA
3566 PF08896
(DUF1842)
 click to view
Estimated TM-score=0.56;
hard target.		 >Domain of unknown function (DUF1842) (Length=114)
VGLFPVSYVVGTGLPGAPTLRLNLLVDTPRRKVVGNATITQAVSPPLDLHVDVWGPYTYMALMPPHGTRILVTVQGNSGG
PTSNAMTTFRMHLVVGADWQAGIASYSYWSNGQW
3567 PF08867
(FRG)
 click to view
Estimated TM-score=0.56;
very hard target.		 >FRG domain (Length=93)
HTVYRGVKDCDFKLEPSIMRLGYSDENELINAEKRLFKAFKQQALPHLEYTPKNDWEWLALAQHHGLPTRLLDWSKNPLI
ALYFAIEEETNSD
3568 PF08809
(DUF1799)
 click to view
Estimated TM-score=0.56;
hard target.		 >Phage related hypothetical protein (DUF1799) (Length=78)
WGLQRSDYADKTTEVWPENWPTYALWSRICNQWRVGMAGAIALDYGVLFHELDRAGLDAEEYDERFRDIQVIESEALT
3569 PF08632
(Zds_C)
 click to view
Estimated TM-score=0.56;
hard target.		 >Activator of mitotic machinery Cdc14 phosphatase activation C-term (Length=51)
PDVDYHWTRFPLLEERAIYRMAHIKLANPRRSLSSQVLLSNFMYNYLAIVQ
3570 PF08574
(Iwr1)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Transcription factor Iwr1 (Length=72)
EDFIYDTYIRVPVAAGGKGVASPNDVGLLIIDDKDQELWRTFAESDDDSEWDEDDPDSNAEDNPANEYPDEE
3571 PF08496
(Peptidase_S49_N)
 click to view
Estimated TM-score=0.56;
hard target.		 >Peptidase family S49 N-terminal (Length=157)
ELLAEYGLFLAKIATVVVAIAIVVTLIVNVAQRKKQHKGELRVTNLSEEYKEMQEEVAVAFLEPHEQKAWHKEQKKKRKQ
EAKEAKARAKRGERAAPGKSKVYVLDFKGSMDAHEVGSLREEVTAVLAVAKPQDEVLVRLESPGGVVHGYGLAASQL
3572 PF08464
(Gemini_AC4_5_2)
 click to view
Estimated TM-score=0.56;
hard target.		 >Geminivirus AC4/5 conserved region (Length=43)
MNYIVSRLKRLDLTWAFTTPRNIWASVHPVHPGLPVHGPVHPC
3573 PF08424
(NRDE-2)
 click to view
Estimated TM-score=0.56;
easy target.		 >NRDE-2, necessary for RNA interference (Length=337)
KVEEYNKKVRENPRDINAWMEFISFQDELMRGPGPYASKGEQESRRKSLKLILEKKLAILERAIESNPSNVDLKLARLKL
CAEFWEPPALIKEWQKLIFLHPNNPEMWKKYLLFCQSQFTTFSVSKINSLYGKCLTTLAAVQDGSMVSHPLLPGTEEAML
AIFIQQCHFLRQAGHSEKAVSLFQALIDFTFFKPDSVKDLPTRGQVEFFEPFWDSGEPRIGEKGARGWKAWMHQQEKGGW
VIKPDDEDDEEIDEDQEIKDKTLPKWRIWLDIEYSREARHWLPWRPDKTKKETEEDCEDPERQVLFDDLGPSLIRLSDPK
LQHQLLYSFLQFLGVPC
3574 PF08417
(PaO)
 click to view
Estimated TM-score=0.56;
trivial target.		 >Pheophorbide a oxygenase (Length=83)
FIAPCIFHAFTVDQVGKSEGFYDFFCVPVSPGHSRLIWSNPRNFGVWIDKIVPRWFSHIGLNLILDSDLYLLHVQERKIE
NIG
3575 PF08197
(TT_ORF2a)
 click to view
Estimated TM-score=0.56;
hard target.		 >pORF2a truncated protein (Length=49)
MAEFSTPVRSGEATEGDLRVPRAGAEGEFTHRSQGAIRARDWPGYGQGS
3576 PF08150
(FerB)
 click to view
Estimated TM-score=0.56;
hard target.		 >FerB (NUC096) domain (Length=77)
PQNSMPDVVIWLISGTKRIASFRIPAYEVLFSPQFDACGQNCGKVLNMFMKYPGKKQMNLEDFPEVPAHVRMIVWLG
3577 PF08130
(Antimicrobial18)
 click to view
Estimated TM-score=0.56;
hard target.		 >Type A lantibiotic family (Length=60)
MKNNKNLFDLEIKKETSQNTDELEPQTAGPAIRASVKQCQKTLKATRLFTVSCKGKNGCK
3578 PF07950
(DUF1691)
 click to view
Estimated TM-score=0.56;
easy target.		 >Protein of unknown function (DUF1691) (Length=113)
LLASHVAMNRVLPLVVDGDSSNIGLGYVAHGFARHAPSAYLAYALLLSVGAGHMVWGMARWLDFAPPANWKKITFDKPTR
SRRRRAWWAVNAAAASLAALWAAGGLGVVARAG
3579 PF07911
(DUF1677)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF1677) (Length=87)
VEDAKCECCGMSEECTLEYIRRVREKFSGKWICGLCTEAVKEEVDKNGGGEEEALSAHMSACVRFNRIGKAYPALYQADA
MREILKK
3580 PF07869
(DUF1656)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF1656) (Length=55)
EIDIYGVLVPALLLWLIVAFAISAVLRRLMQRFGLYRLVWHRALFNFALFVCILG
3581 PF07868
(DUF1655)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF1655) (Length=55)
YILDDSIAFELMDLLKAKARHFIQLNEYVYRLFDGQSVVTFTTLENNIQVEMIKG
3582 PF07785
(DUF1623)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF1623) (Length=92)
LITFVMAILNRADLDQQQIYEKYLKHFDVVDAIMCANGDCLAVCVSAADTLNEPLAYTKFKCVKKHLLQIVDRHDDVELL
LERMYNIVEMYN
3583 PF07781
(Reovirus_Mu2)
 click to view
Estimated TM-score=0.56;
trivial target.		 >Reovirus minor core protein Mu-2 (Length=727)
MITIVVIPTAHFSWTDTNFLNSVDYRLTSQPKIRDRFAVYAPGWLRRQLDEFSASLTASELLQALQTIPIPVKARCLLLP
KPKRFAQWLLDVPSANIWHIPVTTLRATVASKHPSSDVYNYIPDHVPPSAEFDTVTRRVAAGRDIYVRSTKVLGAPLCLA
APAKYYAGYLSTHQLDGVYPDNWAPDNFHKREFCLTILPSLLGPRTFLLDVDADRDASYPLSVLWPQLRVLALKSRLLLP
PVALLRRVVDPGLKPTWSADSDAAFRALRLSRPSSASKPTGFDFSALPVVDIICLFESEPDDHGRVAPGTRLTIHSVPTD
LLTSLSIQEGVRYPLRQESGMFVPWVLLALLMSDDVTISGTRRSVKLETAHASARPFVHITVERCASARVVDVRGSPAMY
ANAVCLTLPKGSYKSTIIDTLPAMFSDLSILEQAAVIDSDALGDSLRPSFETQFLERLENLDPKLLDRAVASILSPASDT
SDDAVTTVLDVFNALYREVMTPAQRSRLPLLTQQGRVLAFAHSDYELLSANIPIQVVRGSIPIDHVVNLLARRNRVGGTA
LQVLLDYCYRTQASPLAPTPAGRLYKQLFGPWLMVPRLSDPLIKLRLVASAPAKVLRAAGWTIDGDPPLEVSCLCAYVTD
RAMAAALIERRLDSRALVNVGGDQLMFVEYAPPLPLVSIPRTFLLPVTYVVHWVSPQRVLLNGGNVSFTSGLEWTFDDDP
QVVTSTG
3584 PF07664
(FeoB_C)
 click to view
Estimated TM-score=0.56;
hard target.		 >Ferrous iron transport protein B C terminus (Length=53)
LFFLYFLGIIVALLMGKIFSKTLFKGETSHFVMELPPYRMPTLKNILRNMWDK
3585 PF07627
(PSCyt3)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF1588) (Length=100)
RRGLLGHASILTLTSVPNRTSPVIRGAWVLDVLLGTPPPRPPADVPPLEENENGQQHVSVRDRTLAHRANTFCASCHNVI
DPVGFSLENFDAVGAWRTRD
3586 PF07622
(DUF1583)
 click to view
Estimated TM-score=0.56;
easy target.		 >Protein of unknown function (DUF1583) (Length=395)
RGSHVEHLLRYIRPMVEDGVIEYEFWYDGDQSAAHPALGRTCYLIRENGVSEHQLTDGRYDKSGLRPDNERRVSAKDSPP
VPLQVKAWNQMQLQRRGDEVVLRLNGQTIHESKIESNSLSPCFGLFHFADQSALRVRNARWSGDWPKELPEIDEQQLAGD
FEGKLDWTASEPGQELSYRIDRDAMVGGRFLQIEGDPAKTLMATDEGVVLNQTSDAGYRGTLMAPDVRVGGDFDITVTYD
QLQCESQKEKIGSIRMHVVADTPAEDTALIQWVNDRGNDQMMQCLRMATVNGEQRRHYFGKIPCDGDAGRLRLSRRGDKV
FYLAADGDSDYFYLIGEEEFVKEDLKPMSIQFGVQIQGPDGRVNARFTEFQVRAERLEGVSEIDHEASLASLDQQ
3587 PF07572
(BCNT)
 click to view
Estimated TM-score=0.56;
hard target.		 >Bucentaur or craniofacial development (Length=73)
SAVDAVLQQIKKKPRLSVLDKSKKDWGEFKEETKGLEEELDSYKKSSNQYLDKVSLQRADYREFERERDARLA
3588 PF07371
(DUF1490)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF1490) (Length=87)
MVWHGLLAKAATTVVTGAVGVAAYDGLRKAVAKAPIREAAVTTTAWALRGARKAEESAESARLKVADVMAEARERIGEEV
PPPAVAD
3589 PF07358
(DUF1482)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF1482) (Length=57)
MFALVLFVCYLDGGCEDIVVDVYNTEQQCLYSMSDQRIRQGGCFPIEDFIDGFWRPA
3590 PF07256
(DUF1435)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF1435) (Length=75)
MFGKKLDSAWGVLLPCAVMPLIALMKLSFSEWRVIMVIALLATVAMLYHKRLRHYLLLPSCLALAGGMAAISVNF
3591 PF07182
(DUF1402)
 click to view
Estimated TM-score=0.56;
easy target.		 >Protein of unknown function (DUF1402) (Length=298)
AYADAAAMVPPGNRNAEQPAIPGASVRRTKGTNSTFERKYQKVHELLATDTKLMSKIKSTARAYGIDPIHIIGALVGEHT
YNVDAYDGLQSYYVKAASYAGQSFRFAYDGEDVDDFVARPQFDACKGKRDSYSLWTCREDVWESDFRGKKVGGKSFPDNR
FSAVFFQPFYAGQTFGLGQVNPLTALELSDLVSSTSGIPKLDEKDAGSVYKAIMDPDLSLAFVAASIRKSIDDYRSIAGM
DISGNPGITATLYNVGNSRQRAAALAAKNRGAGQPVWPEENYYGWLINDKLDDLKSLL
3592 PF07032
(DUF1322)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF1322) (Length=73)
MRINKRSDILQEITHSYFKFLENAKKDKYHFPVMMGICSFDEVKTLNYKDLMEVNKISDLKLQMKIYEMSLSR
3593 PF06967
(Mo-nitro_C)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Mo-dependent nitrogenase C-terminus (Length=83)
LLHPIRQWLDSIEIHNPKLAHSLCKLIPAQCPFERDITMFGRKLFHIPPMCKLNPLYEEVVSLRFRALCYLADECGEDVT
AYC
3594 PF06939
(DUF1286)
 click to view
Estimated TM-score=0.56;
hard target.		 >Protein of unknown function (DUF1286) (Length=124)
MKLRTHYVFSTGLLTFLDSVLFHEYFYYALILSGIVSVIGNSLIDRIGHKEIATRYGYIPVRTPLTHTIPRSVVWGIVSI
IPVFILLLIYYGFSYHEYYFSLSNKVLMLILLNGVVVGPSHMLL
3595 PF06923
(GutM)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Glucitol operon activator protein (GutM) (Length=106)
LIILIGIAWLVQSILGFFQIKHFNKKYAEMRSLGRVAIGKRTGKLRAGTVVMFAIDKRNKILKAAKMQGVTVFSKVKDLN
GFEGKYLLKISDEDFKGHDKLTQLAI
3596 PF06897
(DUF1269)
 click to view
Estimated TM-score=0.56;
easy target.		 >Protein of unknown function (DUF1269) (Length=99)
AVSGGFWGLLIGTLFLSPLLGAAVGAAAGAASGALSDIGVDDNFMKSLGETLQPGTSALFVLVRKVTPDKVLEEIAPYGG
TVLRTSLSKDEEAQLQEVL
3597 PF06854
(Phage_Gp15)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Bacteriophage Gp15 protein (Length=170)
LVDHLPKTVEIEGAEYEIESNFRTYILFEMMMQDPELSDDEKARQGLELVYPEIPENLEAAVDELLWFYACGKRWREKRA
GTVEGAEEVQRIYSFEHDDDYIYSAFLTQYHIDLQDIEYLHWWKFKALMRTLSSELEFSKIMGYRSIDIDASMTKEQRDF
YRRKKELYAL
3598 PF06819
(Arc_PepC)
 click to view
Estimated TM-score=0.56;
very hard target.		 >Archaeal Peptidase A24 C-terminal Domain (Length=111)
LMISLTVIEIIKKLLTTVSREALQDDYNISELREGMIPAYNLYEKYDKVYTDDKSFLSKFKEAMKTGDVTGLTAPKGKLL
ISTMAAGLTDKDVELLEDLLNKGKINDSFRV
3599 PF06703
(SPC25)
 click to view
Estimated TM-score=0.56;
hard target.		 >Microsomal signal peptidase 25 kDa subunit (SPC25) (Length=156)
DLKNTTDDALPNYLTSLKFKQSHFLTDVRLALGYTAVIVSAITFYCDYQLGWDATKAYTLWAVLAYFALNSALTYWIWAV
ERGTVFVGERQGTQVSISSSVTKHTPIYKLSVRYLDSSTPGNSWQTLDVSAPFTNWFSADGYFVAKPFQEWLAAEI
3600 PF06699
(PIG-F)
 click to view
Estimated TM-score=0.56;
hard target.		 >GPI biosynthesis protein family Pig-F (Length=196)
IHPLLVLSVYGLKFNALVADPVSTLFSTLPYLAVLQIAFVAVCLPPTGGAPKKPTEKKAKAPGKPEQGGNSKLVPAFLSL
LLALIAATPLLTATLVLFGAPVSSHYWHTLLCGAHIALLSTLPLVYVHGVDGETWRQIVALLLPIDEVYGGLIGTVLGAW
LGAVPIPLDWDREWQKWPVTIVTGAYIGYAVGKLLG

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