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I-TASSER QUARK LOMETS COACH COFACTOR MetaGO MUSTER CEthreader SEGMER FG-MD ModRefiner REMO DEMO SPRING COTH BSpred ANGLOR BSP-SLIM SAXSTER ThreaDom ThreaDomEx EvoDesign GPCR-I-TASSER BindProf BindProfX SSIPe ResQ IonCom STRUM DAMpred

TM-score TM-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE WDL-RF ATPbind DockRMSD DeepMSA

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13

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Modeling of Pfam protein domain faimilies by C-I-TASSER (Page 54)

Search by Pfam ID:

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# Pfam ID C-I-TASSER models ranked
by estimated TM-score
(click to view)
Full name and representative sequence
5301 PF15119
(APOC4)
click to view
Estimated TM-score=0.48;
hard target.
>Apolipoprotein C4 (Length=93)
STESLSPTPGPESSRWSLVRARVMEMVEPLVTRTRERWQWFWGPGAVQGFMQTYYEDHLKDLGPRTQAWLQSSRDHLLNK
THSLCPRLLCRDR
5302 PF15118
(DUF4560)
click to view
Estimated TM-score=0.48;
hard target.
>Domain of unknown function (DUF4560) (Length=64)
ATALSGLAVRLSRSAAARSYGVFCKGLTRTLLIFFDLAWRLRINFPYLYIVASMMLNVRLQVHI
5303 PF15115
(HDNR)
click to view
Estimated TM-score=0.48;
very hard target.
>Domain of unknown function with conserved HDNR motif (Length=176)
MAKGRRFNPPLDKDGKWFPHIGLTSKTPESITCAMLKESHSPCLSQQIERKLPPIYKVREKQAVNNNFPFSMHDNRHSFE
NSGYYLDSGLGRKKISPDKRQHISRNFNLWACDYVPSCLDGFSNNQISYVYKEAMVAPNFRRFPRCYNEIQNTFKIVPEQ
CCTEFLKKKPKVRFAI
5304 PF15097
(Ig_J_chain)
click to view
Estimated TM-score=0.48;
very hard target.
>Immunoglobulin J chain (Length=134)
EDGRTVLVDNKCQCARITSRIIPSPEDPNEDIVERNIRIIVPLNNRENISDPTSPVRTKFVYHLSDLCKKCDPVEVELGN
QIVIASQSNLCDEDSETCYTYDRNKCYTNRVPFTYGGQTRMVETALTPDSCYPD
5305 PF15075
(DUF4542)
click to view
Estimated TM-score=0.48;
hard target.
>Domain of unknown function (DUF4542) (Length=134)
EQGFVLDSIAVSNISKDYSKAQPKLGPAIPPYNSQKDKNADSYFKFQWAPTVLKRSKQDKGGTSIEGPVIDRFHTYGGGH
QYLSKRNQFGAGHSRELVDGHAQFMSDVKAMNGYHGPFGFRRNTPELRTRPSPF
5306 PF15034
(KRTAP7)
click to view
Estimated TM-score=0.48;
hard target.
>KRTAP type 7 family (Length=84)
MTRFFCCGSYFPGYPCYGTNFHRTFRATPLNCVVPLGSPLNYGYGCNGYSSLGYSFGGSNMYNRGCCYGGSFCRPWGSNS
GFGY
5307 PF14981
(FAM165)
click to view
Estimated TM-score=0.48;
hard target.
>FAM165 family (Length=48)
QALENFPLLMYILAAKTLILCLAFAGVKMYQSKKIEEKLKRQREEKLK
5308 PF14933
(CEP19)
click to view
Estimated TM-score=0.48;
easy target.
>CEP19-like protein (Length=150)
KKCGIRFQPPAIILIYENEVKGKNRQRIMPVRNFSKFSDCTRAAEQLKNNPRHKSYLEQVSLKQLEKLFALLRGHLCGQS
LATTMEQIQRETTIDPEEDLNKLDDKELAKRKSIMDELFEKNQKKKDDPDFVYDIEVEFSQGKLQSCGWD
5309 PF14916
(CCDC92)
click to view
Estimated TM-score=0.48;
hard target.
>Coiled-coil domain of unknown function (Length=53)
ENQLQSAQKNLLFLQREHASTLKGLHAEIRRLQQHCTDLTYELTVKSSDQTGD
5310 PF14914
(LRRC37AB_C)
click to view
Estimated TM-score=0.48;
very hard target.
>LRRC37A/B like protein 1 C-terminal domain (Length=141)
SPGDQVETQLNQQLWSLIPNNDMRRLISHVIQTLKMDCSEAHVQLACANLMSQTGLLMKLLSKQQEVNVSKAEWHTDQWK
TDNYISERTETQSEQKEQESSELTEEVPGYGYNNKLILAIYVTVVVRILVTILCLIEDSRK
5311 PF14892
(DUF4490)
click to view
Estimated TM-score=0.48;
very hard target.
>Domain of unknown function (DUF4490) (Length=103)
ENPRECVEPAESKAKAPPEKTSDYYRVSENLPPRFNNPGWFRGYRTKESVSVFRTSNQAYGSRAPTVHEMPKAFYPNSNK
FSRQLAASGMFRNNTFNVCMDKS
5312 PF14802
(TMEM192)
click to view
Estimated TM-score=0.48;
hard target.
>TMEM192 family (Length=224)
QEPILATQENGDFEPLYTAPVFSFHLLISSIISVTGIALAATWDDSKRCEAYFIMMYLRVAFWILTYLIDYLVKKHHRAL
ALKGYLDFNRTTKHHSTIPLQIVSLWNTFLLAIHTLMQHYYGDDFGQKCIVVGWLAPIVYITAFSCLETGVLSIVNGSYI
AKVRRFNRTAAPPDALQDNRGMRGGSVGLTQRGLSTTELLEKQADLINYLKDHNLKLNQKIMQM
5313 PF14665
(RICTOR_phospho)
click to view
Estimated TM-score=0.48;
very hard target.
>Rapamycin-insensitive companion of mTOR, phosphorylation-site (Length=109)
PFPFFSSSRLVKNRILNSLTLPNKKHRSSSDPKGGKLASSDSKSGLRRNRTVTEPSSSIDFTPGDEFNPVFRVPKIQTLR
LETSFVGSKHTEDTDSTPSIGENDLKLPK
5314 PF14406
(Bacteroid_pep)
click to view
Estimated TM-score=0.48;
very hard target.
>Ribosomally synthesized peptide in Bacteroidetes (Length=54)
MKKLNGMKSFSSLENKKLESENLEGVAGGRAQERYSEVTSNFLNADGARDYDMY
5315 PF14214
(Helitron_like_N)
click to view
Estimated TM-score=0.48;
very hard target.
>Helitron helicase-like domain at N-terminus (Length=174)
YFAFRIHERSNEISTIMYAKRLFQQFLVDAYTMVESSRLHYIRLNKKALRCEAYKGLSDALTRGEVQPSSQGKRIILPSS
FTGVARYMIQNYQDAMAICRFVGYPNLFITFTCNPKWPEIERFLEKRNLKAEDRPDIVCRVFKMKLDCLIKEIKNGKLFG
RVKKRGLPHAHILL
5316 PF13926
(DUF4211)
click to view
Estimated TM-score=0.48;
hard target.
>Domain of unknown function (DUF4211) (Length=140)
DFVVEDDEGPIGVPDHLLEIPLQFTAHAHKPLKEHFKDVIEWLVHRRINPSFDRENQVYRIAWGKLNDEVSGLAQSKFAS
SAWRPDFIRTMRARPRILQAELPPGHLSELHGTCDACGRSNHPASWVISFAGSPYDKDTL
5317 PF13830
(DUF4192)
click to view
Estimated TM-score=0.48;
hard target.
>Domain of unknown function (DUF4192) (Length=309)
PADLIAAVPYLLGFHPADSVVVVAMRGRRITFAARADLPEPASEADPPARHLAEVIARQHADSATVIGYGPAARVTPAVD
AVRAALAGAGLAVLDALRVTDGRWWSYLCTEPECCPPDGSPYDPGASAVPAAAVVAGQVALPDRAALVAQVAPVGGPVRV
AMRRATDRAERRLTDLLDQAPPADLLGGRSLRAAGVAAVRAALRRHRRGERLTDDEVAWLSLLLTHLPVRDHAWDRTDGR
DADIALWTDVLRRAEPELTAAPASLLAFAAWRAGQGALAAVALERALTEHPDYTLAALLDDLLRRGVPP
5318 PF13807
(GNVR)
click to view
Estimated TM-score=0.48;
hard target.
>G-rich domain on putative tyrosine kinase (Length=82)
ETQQEVLRLTRDVEVNQEIYLQLLNRMQELNVMKAGTVGNVRILDEAVIQPQPVAPKKPLIVVLATMLGGMFAVGLVFVR
AA
5319 PF13751
(DDE_Tnp_1_6)
click to view
Estimated TM-score=0.48;
hard target.
>Transposase DDE domain (Length=119)
VCPQGQALPYSTTNRLGYREYKSNAQICGRCPVRSQCTNSAIAVKVVTRHVWERAKERVDARRLTEWGQRIYARRKQTVE
RSFADAKQLHGHRYARMRGLRKVAEQCLLAAAAQNIKKI
5320 PF13600
(DUF4140)
click to view
Estimated TM-score=0.48;
hard target.
>N-terminal domain of unknown function (DUF4140) (Length=100)
VIVYGDRAEVKRIVKCDLNEGRNELIIQNVSSVIERQSLRVDGGGAAIIQDVRYQELPLDTGDNENGKVRELEEQRSDLE
TEKASLDDELNILKKRVEVL
5321 PF13448
(DUF4114)
click to view
Estimated TM-score=0.48;
easy target.
>Domain of unknown function (DUF4114) (Length=84)
FPAGTHIGFFIAANGFWYDTGVKPNAVPYYYSLKNLNPDTQPIHKQHNVLLYDTEVQEVIIGFEDLPRAWGDNDFNDAVF
SVKA
5322 PF13438
(DUF4113)
click to view
Estimated TM-score=0.48;
hard target.
>Domain of unknown function (DUF4113) (Length=50)
RLAAAIDAINRKNGHNTIKVAVQGTTDKSWHLKCEHISKQYTTNLDDVIL
5323 PF13265
(DUF4056)
click to view
Estimated TM-score=0.48;
very hard target.
>Protein of unknown function (DUF4056) (Length=261)
PIEPPEGLRACCAFGYDLKTEVVGIPVPFYDIDNIVEAEKLGEHHYNDSALGASAALLGISNEKIGLLYTQKGGFIDISH
VRDTADYTLYLFSQIYAHLGQERKLSLSNELAARKIHFFAFTPPVDPVERYTLSAYLAAKLAFQLAAWHEIAQWYGYQSV
PGFPEGISAFSPEDLYSNLLGARLALTLILQGHASSVTQFTTSMAAILPSALHKLEPYSKSDTKKMFNQVDGLWWNSHER
IPQKFLVLRRNYEIQDNRYPL
5324 PF13221
(DUF4029)
click to view
Estimated TM-score=0.48;
hard target.
>Protein of unknown function (DUF4029) (Length=96)
MTKIELMALFLGYVFIFSNLNRIQEQSILEICIFSISIELFSIVSIILLNELFRWIHSFELMKFWNVVLQVICAYIVFVV
LDKIVGQQTVFQDNRK
5325 PF13212
(DUF4020)
click to view
Estimated TM-score=0.48;
hard target.
>Domain of unknown function (DUF4020) (Length=176)
VFIKCVLYWEQKTDWLYPLLILENEENKIKFMQFLCYYVKTLSVKEQQKFWTAWLSVFLRERPKMGEITAREYVMLLRII
LYMDEILEKGLCIMSRAFSSVHGKCAGEEMKQLLIEMLHKKESMKAHKEIFANVFFILLQTCHEAVLFEKEVIKIKELLV
QYEVEEYVLHLLENEI
5326 PF13140
(DUF3980)
click to view
Estimated TM-score=0.48;
hard target.
>Domain of unknown function (DUF3980) (Length=87)
EEKQTSYLSIKIFKIMSVIYLIGSILMAFSTGPFIHNIGFDEMPISGPELGLISIVMLGSIFQSVLVFCGIWVFILLVET
VIKIYEK
5327 PF13118
(DUF3972)
click to view
Estimated TM-score=0.48;
hard target.
>Protein of unknown function (DUF3972) (Length=124)
EFSRLSGLPKERILELVNLGKIKSKTSNNKLLIDASSGTNALIKKVENNLISMDMNGRSLEPVFVEKTINTILNLHDKVI
GAKDETISAFKNENMFLKDALISMQEVYEEDKKTIDLLRDELNQ
5328 PF13043
(DUF3903)
click to view
Estimated TM-score=0.48;
hard target.
>Domain of unknown function (DUF3903) (Length=40)
VSATSHTLAIEKVTNECKRRFGKSLLLQTEITEEYSAYQK
5329 PF13037
(DUF3898)
click to view
Estimated TM-score=0.48;
very hard target.
>Domain of unknown function (DUF3898) (Length=89)
EMQEKWTPDQVVEASAPIIEHQPEIELKLKLDHIDVKAMLSDFGECLHIAKVNGKYVIVIEGDSFTFEKGVSPVEFLKPD
DLEEVLKRV
5330 PF12863
(DUF3821)
click to view
Estimated TM-score=0.48;
hard target.
>Domain of unknown function (DUF3821) (Length=216)
AGGEVFLGEKGLDVSAATGGSSQIAWWQPGTNTETEQPADIQQVTNAQNFYVSPDIFVGKTGNWYQWNGSVKGPLAFNIK
EPSLNLKIWDGSVNEDVTGKAIPVGNYGNFVVETNMQSIITRPGYQPADAPFKIKVKSADGGVYTNLVGNNGKEISLTNL
AVNQQLWYWVSPDNKHTEPASNDGWNTAAEDKYGNRMYKAGTYTVWAECNANGMKD
5331 PF12739
(TRAPPC-Trs85)
click to view
Estimated TM-score=0.48;
hard target.
>ER-Golgi trafficking TRAPP I complex 85 kDa subunit (Length=391)
PEPVEQFLKLSQEQHRIQHSSDYLYPKWFIPNTLKYYVLLHDVSAGEEQRADSIYEEMKQRYGTQGCYLLKINSRVSNRG
VDEQIPDPWSQYLQKNSIQNQESYEDGPYTVISNKSADHLISDGLDIDIRDHDRIRQFIQEFTFRGLLPHIEKTIRQLND
QLISRKGLSRSLFSATKKWFGGGKVPEKSINELKNTSGLLYPPEAPELQIRKMADLCFLVQHYELAYSCYHTAKKDFLND
QAMFYAAGALEMAAVSAFLQPGAPRPYPAHYMDTAIQTYRDICKNMVLAERCVLLSAEILKSQSKYSEAAALLIRLTSED
SDLRSALLLEQAAHCFINMKSPMVRKFAFHMILAGHRFSKAGQKKHALRCYCQAMQVYKGKGWSLAEDHIN
5332 PF12598
(TBX)
click to view
Estimated TM-score=0.48;
hard target.
>T-box transcription factor (Length=78)
RMYEDQCKADREGGDSDASSSEPTTGREAAQSPMGPASSPLRFRRASRADEKPCADSDQELDQQEERSAGVGSPGPEP
5333 PF12578
(3-PAP)
click to view
Estimated TM-score=0.48;
hard target.
>Myotubularin-associated protein (Length=127)
HQRQLSLPLPQSKSSPKRGFFREETDHLIKNLLGKRISKLINSSDELQDTFREFYDSWHSKPTDYHGLLLPHIEGPEIRV
WAQRYLRWIPEAQILGGGRVATMSKLLEMMEEVQSLQEKIDERHHTQ
5334 PF12496
(BNIP2)
click to view
Estimated TM-score=0.48;
very hard target.
>Bcl2-/adenovirus E1B nineteen kDa-interacting protein 2 (Length=129)
KRKTLVAPEINISLDQSEGSLLSDDFLDTPDDLDINVDDIETPDETDSLEFLGNGNDLEWEDDTPVATAKNMPGDSADLF
GDGTAEDGSATNGRLWRTVIIGEQEHRIDLHMIRPYMKVVTHGGYYGEG
5335 PF12479
(DUF3698)
click to view
Estimated TM-score=0.48;
very hard target.
>Protein of unknown function (DUF3698) (Length=107)
LLTNPNFKPDIVHVSYDEASTRQNPDICFAIGDYKTENYFLTQGLQELKLAITDFVEKRLNLKQLRSRENQRIFEDREWS
PRVLCALVLRKYLYQAFLCGTDRVFIS
5336 PF12471
(GTP_CH_N)
click to view
Estimated TM-score=0.48;
very hard target.
>GTP cyclohydrolase N terminal (Length=194)
VKLTTHPSNFGVDPEPLDWGNRDPKKRGPVVATVSKPGMRNAIGAHSGTYCVYRAVALAVQSAPADFRPDFTNTLPPVKI
GPFESWFDTSKIASLDPWGHVPQSIFGDRLANGTLDIRPTISVTKSHLELPELQLAVKNGTLKKDGTVIVDTVGAFESSV
VVTKAAVEPVWYLPEVARRFKCDEMQLRRTLYEQ
5337 PF12467
(CMV_1a)
click to view
Estimated TM-score=0.48;
very hard target.
>Cucumber mosaic virus 1a protein family (Length=169)
WVSHFFKSLWPSGDLRDLFGRYFPSLIRYYDKIEFVEKLTHCEVFVNELGMTDDKEQRDVVAEAADVLKNTLLKVAIKMS
LDKTFRPAEEKKEERTTTTTVTSSAVGDVDERPAGTVSGPTIQAPSVTQENTVTSLSEPLDGRLAVRLEAMKEYKRYLLK
LQKNTESNL
5338 PF12462
(Helicase_IV_N)
click to view
Estimated TM-score=0.48;
hard target.
>DNA helicase IV / RNA helicase N terminal (Length=163)
MELKATSLGKHLAQHPYNRVRLLSAGVEVSGEKHEYLIPFNQLLSIKCKRGLVWGELEFTLPDNKVVRLHGTEWSETQRF
YHYLNQAWQQWSSEMSEVCAEVLSAQEQQIRQAEQQDKWLKRSDIAAWQQAIHKAFAAVPLPVERLDEFDNCREAYRYCR
QWL
5339 PF12459
(DUF3687)
click to view
Estimated TM-score=0.48;
easy target.
>D-Ala-teichoic acid biosynthesis protein (Length=42)
IWHQPVVAFVGWTLFYFVILMALVYLYGYSGLNSSTFIYNEF
5340 PF12441
(CopG_antitoxin)
click to view
Estimated TM-score=0.48;
easy target.
>CopG antitoxin of type II toxin-antitoxin system (Length=79)
KPVPAFKSEAEERKFWETHDSTDYVDWSTAQRMRFPNLKPSTTAISLRLPVSLLEQIKIAANKRDVPYQSLIKMWLAEK
5341 PF12417
(DUF3669)
click to view
Estimated TM-score=0.48;
hard target.
>Zinc finger protein (Length=65)
MWVLDFDCCRRMTMDEAGIKQACKSFWRNDPYYPRPGSDNQTDRRLWDVFQDRFLEISKRLLEGE
5342 PF12409
(P5-ATPase)
click to view
Estimated TM-score=0.48;
very hard target.
>P5-type ATPase cation transporter (Length=124)
DNREIFGYKTQGCRRAMCIAGYIFSCGALLLLFYWKPAWDVWANCIPCNLQEADVILLRTTDEFQKYTRKKVTWIDLSTM
NLSVRDSSDSLFVADKDSVINRAIMKPELKVRSIQVQKIRYIWD
5343 PF12377
(DuffyBP_N)
click to view
Estimated TM-score=0.48;
very hard target.
>Duffy binding protein N terminal (Length=67)
DDKANGEHKTDNKTNKGEGARNMVMLDYDISGSGHPDGIIDNVVELGTEDEGNFLENSSKGGDHPYR
5344 PF12375
(DUF3653)
click to view
Estimated TM-score=0.48;
hard target.
>Phage protein (Length=68)
GYLPNDLRWSGFRICEKRAVLITPSGREFSPKELESFVFWRDEYRQFVEMYGHFEYPKVYPAKENVLP
5345 PF12214
(TPX2_importin)
click to view
Estimated TM-score=0.48;
hard target.
>Cell cycle regulated microtubule associated protein (Length=172)
ILTRPKEPEFVTAQRVRPTRVKSSAELEEEMMAKIPKFKARPLNKKILEVPTLPALPKSTPQLPEFKEFHLQTMARANQN
AETSTVASIDSTQSHQWKSLHLTAPTSPVLKTSLRGRPPRIRSSKEMEKEELEKVPKFKARPLNKKIFESKGDLGMFCNT
KRQVTVPQEFHF
5346 PF12065
(DUF3545)
click to view
Estimated TM-score=0.48;
hard target.
>Protein of unknown function (DUF3545) (Length=59)
MDRLDYGGALDEVVERPTRSKSSSKKRKWREIEAIKDKQRLLKELQDIDDSFDFDVNTL
5347 PF11833
(CPP1-like)
click to view
Estimated TM-score=0.48;
hard target.
>Protein CHAPERONE-LIKE PROTEIN OF POR1-like (Length=181)
RDASEEEIRSARNFLIQQYAGHEPSEEAIEGAYEKIIMKSYQQRKKTKINLKTKLKKRVEESPSWVKALLGYFEVPPMDI
ISRRLFFFAFIAGWSIATSAENGPAFQLAISLFSCIYFLNDKMKNLMRASTTGFGVLVGGWIIGSLLVPLIPTFIIPPSW
SLELLTSLVAYVFLFLGCTFL
5348 PF11809
(DUF3330)
click to view
Estimated TM-score=0.48;
hard target.
>Domain of unknown function (DUF3330) (Length=69)
ATMNASDSTTTSCCVCCKEIPLDAAFTPEGAEYVEHFCGLECYQRFEARAKTGNETDADPNACDSLPSD
5349 PF11803
(UXS1_N)
click to view
Estimated TM-score=0.48;
hard target.
>UDP-glucuronate decarboxylase N-terminal (Length=75)
KRIIWLISGLNRRMMKLLFALALIAYIASVWGTYTNMRSIQENGEMKIEQRIDEAVAPLREKIRDLEQSFSQKYP
5350 PF11800
(RP-C_C)
click to view
Estimated TM-score=0.48;
very hard target.
>Replication protein C C-terminal region (Length=203)
NWGAIEERFCALIARIPRTPTIADLEPIREEMEMLREDVVNILEMQVDSEKLHINEVHSERHIQNSNTDYSNELEPRSET
RSAAKPSQTSRAVREPIKAFPLGTVLKACPDIADYGPGGAVESWRDLMQAAVVVRSMLGVSPSAYQDACEVMGAENAAVV
IACILERAGHVNSPGGYLRNLTAKARQGEFSLGPMLMALLRAN
5351 PF11779
(SPT_ssu-like)
click to view
Estimated TM-score=0.48;
hard target.
>Small subunit of serine palmitoyltransferase-like (Length=53)
RWLHLKQYQLEVTFCVYIFTPWEKFAFYTILFLLSSLTFIATVLYLPQHIAFI
5352 PF11453
(DUF2950)
click to view
Estimated TM-score=0.48;
very hard target.
>Protein of unknown function (DUF2950) (Length=279)
QQTYGSPEEAVQALIAAMKSHDKKQIGVVLGPYSKDIVSSGDEVADRETLEKFINLYDEKNKIEKAGDSKVVLLVGEKDW
PLPIPIVQKGKRWVFDTKSGKEEILNRRIGRNELAVIKVCEAYVDAQQEFALMDTDGDGLFEYAQKFWSTPGKKDGLYWE
TKEGEEPSPLGPFVAKAKREGYVKSSASDQPQPYHGYFYRILKGQGKNARGGAYDYVVNGNMIGGFALVAYPAQYGNSGI
MTFIVNQDGVVYQKNLGKNTANTAQAMKIFDPDKTWQKV
5353 PF11389
(Porin_OmpL1)
click to view
Estimated TM-score=0.48;
hard target.
>Leptospira porin protein OmpL1 (Length=275)
KSYITGGLGLQFDLGSLGDTIATDGLDASGSYKTTDSTGTQAGVLPRRAIIPENRLLSLQHTTNGLISAKTSGAMTGLTL
SLGYEQDFGKAFFWRVNAHYTRKVMGGDTSAKFLGQGFYDITWDYHAIQVPVNVGIKLSVTEDTAFYIGAGVHYFNGGWS
LAGSNRLNDVHNALVGAGVTNTTILGLVADGTDPSANWEKTTFQVSGVAPNWLIGAQTKISDKGSLYMEVETLFSFKYGI
GHPRSAGGAQGLAPSVAYPQVLGGNQYRFGYKHEI
5354 PF11369
(DUF3160)
click to view
Estimated TM-score=0.48;
hard target.
>Protein of unknown function (DUF3160) (Length=626)
SEAQKLLVDNGFVVIPAQNPEFFIVYETNRYDGIPNFITTDAMLHNYHLFFNQLLKTVETQYLIPELKKLNTGMLAESQK
QYESLKGTAWENAARRNVAFFAVGNRLLDPQAKIPEQVKEEVERELALIEAHQETAVSPVMTMGKSPDVLESLKEDYTQY
IPRGHYVKSEELKNYFKTMTWYGRLTFRLKDQDEIRSAVLMTLALNRGENLKNWENIYRTTAFFVGKSDDLGYLDFQPIL
AEVYGNAVSLKQLATDSSQWELFMKKAAKLRPPAINSIPIFDETIQPDREREIKGFRFMGQRFTLDASVFQRLVYREVKE
NPDGQRRVLPKGLDIPAAMGSGESYAILKEMGETRYRNYPENMAKMRQYIKGLDKSTWTQNLYWSWLYTLKPLIQEKPEG
YPSFMRNQAWARKELNTYLGSWTELKHDTVLYAKQVYAEMGGGWEQGDDRGYVEPNPEVYARLAALTAMTREGLQSRGLL
AERDKESLNRLEKLALDLKDISVKELNNEPLSEADYELIRTFGGQLEHFWLEALRDEVESRSQIWENPAPVVADVATAPP
DLVLEEGTGYISDIYVVVPVEGKLRIARGGVYSYYEFPWSAADRLTDQKWQEMLRSGKAPEPPKWT
5355 PF11364
(DUF3165)
click to view
Estimated TM-score=0.48;
hard target.
>Protein of unknown function (DUF3165) (Length=81)
MFYLIMAVLIISYYLYMAPKSVRNTLGMIGLVGLVALLIVLAGLSFIKIMQTPPEFFIGMGMVALGYFALKDVRKMTKKP
R
5356 PF11192
(DUF2977)
click to view
Estimated TM-score=0.48;
hard target.
>Protein of unknown function (DUF2977) (Length=61)
MKITVNDKNEVIGYVNTGGLRNSLDVDDNNLPIKFKEEFEPRKFVFTNGEIKYNSNFEKED
5357 PF11168
(DUF2955)
click to view
Estimated TM-score=0.48;
hard target.
>Protein of unknown function (DUF2955) (Length=140)
QCLRIATGATIGFTLCKLFGWNYGVFFTVTPMLLLGMVPVVNLHASRQLIFSAVVCGIEVGILGGLFGSHPVLMTLIAFG
LFLYKFACMSKGSLFLFGANSVLSLSIMLHFASYPTTDLNDLIFSNLQANVLSIIVAYLV
5358 PF11134
(Phage_stabilise)
click to view
Estimated TM-score=0.48;
hard target.
>Phage stabilisation protein (Length=469)
QQLPMMKGMGKDFKNADYIDYLPVNMLATPKEILNSSGYLRSFPGITKRYDMNGVSRGVEYNTAQNAVYRVCGGKLYKGE
SEVGDVAGSGRVSMAHGRTSQAVGVNGQLVEYRYDGTVKTVSNWPADSGFTQYELGSVRDITRLRGRYAWSKDGTDSWFI
TDLEDESHPDRYSAQYRAESQPDGIIGIGTWRDFIVCFGSSTIEYFSLTGATTAGAALYVAQPSLMVQKGIAGTYCKTPF
ADSYAFISHPATGAPSVYIIGSGQASPIATASIEKIIRSYTAEEMATGVMETLRFDSHELLIIHLPRHVLVYDASSSQNG
PQWCVLKTGLYDDVYRGVDFMYEGNQITCGDKSEAVVGQLQFDISSQYDKQQEHLLFTPLFKADNARCFDLEVESSTGVA
QYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVLWKRVGRIRKNIGFKLRVITKSPVTLSGCQIRIE
5359 PF11069
(DUF2870)
click to view
Estimated TM-score=0.48;
hard target.
>Protein of unknown function (DUF2870) (Length=96)
QLWWAAKEMQRGKKLQDYIGRNEKTKLVVKIQKKGQGAPAREPVITDEQQKQMMMHYYRRQEELKKLEEADDDSYMDSEW
SDRQALKRQFQGLTNI
5360 PF10951
(DUF2776)
click to view
Estimated TM-score=0.48;
hard target.
>Protein of unknown function (DUF2776) (Length=347)
MNYGISILFRAIPLAMAIFCFGYGAFIYGYGDDGSRVVAGPVVFSLGMICIALFCTAATIIRQIIHTYNKSAKYVLPVIG
YLAAIITIIGGICIFSNATSTSAFVAGHVITGVGFITTCVATAATSSTRFSLIPRNSKATSNEVPEGAFSLNQRRALVIV
AIIVSLIAWIWAFVLLSNSHSHPAYYVAGHVMVGLACICTSLIALVATIARQIRNDYSEKERNKWPKLVLLMGSISFVWG
LFVILADSGSANGTTGYIMLGLGLVCYSISSKVILLAKIWRQEFKLANRIPMIPVFTALACLFLAAFVFELATIHADYFI
PARVLVGLGAICFTLFSIVSILESGTS
5361 PF10950
(Organ_specific)
click to view
Estimated TM-score=0.48;
very hard target.
>Organ specific protein (Length=117)
KDPAEYWKMVMKDKDMPEAIQGLLNTNSKKGLKHCDEKLVKDTQVIVEEKVYIEDLEPRPNISAYEGNDVDNKEKKKDIK
DFEPKSNISAYEDNVIDYNEKKEDIKDFEPRPNISAY
5362 PF10884
(DUF2683)
click to view
Estimated TM-score=0.48;
easy target.
>Protein of unknown function (DUF2683) (Length=78)
MVKAIVDITDENNRIINIVKAKYNLRDKSQAINKIIEEYAEFLLEDELKPEYIEKIRNIMKNEKPIYIGSIENLKKRY
5363 PF10880
(DUF2673)
click to view
Estimated TM-score=0.48;
hard target.
>Protein of unknown function (DUF2673) (Length=82)
MKNLLKILLIIAFANPVFASSMQMPDPASVTTTQIHAMSTNAQQDWIASLTANQYNMLSPDVQKWVMENTTDAQKQALGI
NQ
5364 PF10878
(DUF2672)
click to view
Estimated TM-score=0.48;
hard target.
>Protein of unknown function (DUF2672) (Length=67)
FIIKKLKTIKASFIKSFFIKDIDESLETEQINFYLKRIINLEGYYYGNYDLTTIKEKYYTLIINNAF
5365 PF10864
(DUF2663)
click to view
Estimated TM-score=0.48;
hard target.
>Protein of unknown function (DUF2663) (Length=127)
MLQALVKRKQKFENYAAQCRRWRWTSLICLGLFCLMIMIKSPAPRLVLQEMLSHTFYLFWMMATAFAYCTSYYFKKKEEK
AEGDFHKLRCEIIQKSTDLWPQPDKWKARESVFHMMKHKYDINLYFE
5366 PF10828
(DUF2570)
click to view
Estimated TM-score=0.48;
easy target.
>Protein of unknown function (DUF2570) (Length=108)
NWISGTIAIVILGLCVWLWGQSQMIDSLRAENRAQAQTIEQQQKANQRLTDSLEQERQAVEKIQKIANELRNKVEMAKNE
ITSILAQDSCAKADLPNGVADSIKRLHQ
5367 PF10806
(SAM35)
click to view
Estimated TM-score=0.48;
hard target.
>SAM35, subunit of SAM coomplex (Length=128)
FAVPGPVKALFDHFPLQTYPPISKRDDAMNYEFAQRTYDFQGPNAVQDDINNTFTLGVYNTFQESSSDVALATDPWCLYA
QLALCKKNSLKLPQVTRAESGRPSKPQQKMALLSPLATQNESLPILVE
5368 PF10789
(Phage_RpbA)
click to view
Estimated TM-score=0.48;
hard target.
>Phage RNA polymerase binding, RpbA (Length=110)
ADLKVTSIRTDANPHNHNRVRKAWVLHCDDASAKKLQSLPQETRFMIYGFIDNDVSDMWIHLMRKHYKDSIEAGAKIVLD
KDGSERLEDFYCVDADEQLIAAGEIVASKI
5369 PF10779
(XhlA)
click to view
Estimated TM-score=0.48;
easy target.
>Haemolysin XhlA (Length=66)
VKDKLDTHERRLNNHSERIDKLEQDGRELKTELKNLCENLKSLTSMMKWFIATLVGALISFFFYAV
5370 PF10723
(RepB-RCR_reg)
click to view
Estimated TM-score=0.48;
easy target.
>Replication regulatory protein RepB (Length=79)
MSQIENAVTSSPKRIYRKGNPLTGAEKQRISVSRKKGTHKAINVFIQSELKDDLTQLCKDSGLTQKEMIEHWILKEKAA
5371 PF10679
(DUF2491)
click to view
Estimated TM-score=0.48;
very hard target.
>Protein of unknown function (DUF2491) (Length=212)
MFSKLFGKKETKTTPKAPEIMGLYLGGSFELDPLKLRLIEPQLMIEKAASQHLIQAVGEVNLDTGGKILRFYTDDDAFLQ
VILDGGDTENHITDVKLWYFYETKTIGSEAQWKQTIASGVSKPTYQLEDTEYQRVWDAVGDESPPVAMTEKTYEQDGDTS
ETDQFVMLYERQLDDDETETLLVTAEEKLVNNNFDRCLVVSTGFNIGQADIK
5372 PF10642
(Tom5)
click to view
Estimated TM-score=0.48;
easy target.
>Mitochondrial import receptor subunit or translocase (Length=48)
MFGGFAPPQLSEEEIRQAEAEANFTIQQAVATAVALYLSPFVIDAVSK
5373 PF10573
(UPF0561)
click to view
Estimated TM-score=0.48;
very hard target.
>Uncharacterised protein family UPF0561 (Length=120)
RDDEAQELKYKPGGRLDMSHGFLHHIRRNQIARDDYDKEVKQAKELQRRRHTTTPRRPRRPDIQVYHPRSRHGSEPGGTA
EAEEWNESGSSTEAETQAVELFWLDYQADSGDITSFIVHK
5374 PF10533
(Plant_zn_clust)
click to view
Estimated TM-score=0.48;
very hard target.
>Plant zinc cluster domain (Length=49)
KKRCHSHAHSEDFAGKFAANGGRCHCSKRRKNRVKRTIRVPAISSKMAD
5375 PF10532
(Plant_all_beta)
click to view
Estimated TM-score=0.48;
very hard target.
>Plant specific N-all beta domain (Length=119)
TKLGLDANKVKLHMRYNPRLFGVEEEMNVCDDEDVFIYATSAKNNRRSVLVVEEISKPPEQEQLPEQLSRVGKSSVGKNY
TELNSEEDEMRVDDGALIVLLEEEQGTQHQLEAIVEDHG
5376 PF10312
(Cactin_mid)
click to view
Estimated TM-score=0.48;
hard target.
>Conserved mid region of cactin (Length=191)
RSKEVAQFEEWQRQEETFHLEQAKLRSKIRIQDGRAKPIDLLAQYISEQNLEESIEMQMHEPYTYLNGLGLDDLEDLIAD
IKVYNELEKGQNGDYWNDLTIIVEDELQKLRKVEVEKQRMATGRREGIHQSVAKDVTQIFKGKSSSQLDELKKKIEDKIN
SQQDGLDIGYWESLLSQLKAHMARARLRDRH
5377 PF10177
(DUF2371)
click to view
Estimated TM-score=0.48;
very hard target.
>Uncharacterised conserved protein (DUF2371) (Length=140)
KQDPLRPQSQVPKRKRKAKKKRKNDVVVVKGKLKLCSISGLIALCGILVLLVGIAMAVVGYWPKGSGTHREGTNSSSSSS
SSSSSASVGFLFQLFSGYLHSDKLKVFGPLIMGIGIFLFICANAVLHENRDKKTKIINLR
5378 PF10168
(Nup88)
click to view
Estimated TM-score=0.48;
easy target.
>Nuclear pore component (Length=713)
RWRRELASHQIFLRLQENVRGEAESTAKAPAKNLLFNLDGDLFLWDGDNSVFYTTNLRQLNSEQPSPAAPYQTLLCINPP
LFEVHQVLLSPTQHHVVLIGSKGLMVLELPQRWGKRSEFEGGKDTVNCRTISIAERFFTSSTSLTLRHAAWYPSETEEPH
LLLLTSDNSLRIYSLKEPQTPLKVLSLSQSEEESVLLPRGRSYTAPMGEVAVAFDFGPLVAVSSHLVGQKGKEEVQAFPL
YILYENGETFLMYLFLSHGIGSFGKLLGPLPMHPAAEDNYGYDACAVLCLPCVPNILVIATESGMLYHCVVLEAEEEEDQ
TSSESWDPRSEMVPSLYVFECVELELALKLPSGEEEEPMESDFSCPISLHRDPLCQSRYHCTHEAGVHSVGLTWLNKFQK
FLASDEEDKDGLQELAAEQKCIVEHILCTRPLPCSQSAPIKGFLIICDLSLGASMICITNAFECITRPLLSTIRPASPPL
LCSKAESELAASPLRTFAVDSFEKHIRNILKRTSTNPVFLKASEKETSPPPQECLQLLSRATQVFREEYIIKQDLAREEI
QRRVKLLRGQKEKQLEDLEHCIEERKNLREMAERLADKYEEAKEKQDIIMNRMKKVLRSFSSQLPVLSDSEKDMKKELNT
INGQLRHLGNTIKQVKMKMEYQNRQTEKGASPRKSTLSLSDYQKKCIYNVLKEDGEHIAEIVKQLNDIRSHVD
5379 PF10122
(Mu-like_Com)
click to view
Estimated TM-score=0.48;
easy target.
>Mu-like prophage protein Com (Length=51)
NRREVRCGHCHRLLAKGEALDLTIKCPRCGTLNHVRGMSPDAEGPRASDRS
5380 PF10092
(DUF2330)
click to view
Estimated TM-score=0.48;
very hard target.
>Uncharacterized protein conserved in bacteria (DUF2330) (Length=329)
IVGFCGFYVAKADTKLFNRASQVVLVRDGDRTVMTMANDFEGEPKEFAVVIPVPTFLTREQIHVGEKALVDHLDAYSAPR
LVEYFDQNPCERREYRLALPMSAARASGAAQDSASLAKALGVTIEAQYTVGEYDILILSAQQSSGLETWLRQNGYRIPPG
ASEVIGSYLKQNMRFFVAKVNLAEQSRLGFSYLRPLQVAYESPKFMLPIRLGMVNANGPQELFVYALTRNGRVETTNYRT
AKLPADMDLPVYLKQPNEFAAFYKAMFTRQVENQDGSAVFLEYAWDMKWCDPCAADPLSNDELRRLGVFWIDVHVRYDNA
HFPEDLVFQ
5381 PF09930
(DUF2162)
click to view
Estimated TM-score=0.48;
hard target.
>Predicted transporter (DUF2162) (Length=219)
LTVIGILIGIFIFGIKTGLGCGFSNITTREILTIGGSYFFLALLFGSVADRLSLDAFERLSAMGMGIHVLVSLLLIGAGI
YTQKKWNSGKDVSRHTFLAISMPCPVCLGAIAVSCMLLSQSLNLSGIKIGFLVGIAFFIAVVASSFLFRFGKVRCGKTPE
TMGSAMMLLGIYYLLGALLIPAYMKSKQMNLAPMQTGESGLFPLLAFGIIILAGFFLDR
5382 PF09898
(DUF2125)
click to view
Estimated TM-score=0.48;
very hard target.
>Uncharacterized protein conserved in bacteria (DUF2125) (Length=307)
WFYASSRVQDEINHWVVREAAQGRNWSCGSLSFGGFPFRFELICEAPSLAFTGASQWKADAARAHAVAQVWDPQHIIAEF
KGPARIVETATGKELTANWSLLQASGVGANGKPERVSVSANDYALTQGSTSLFAAKHVEVHVRHHPGDAGPTLDVAAGMH
AATGPALGGTAPAPVDGELQAQVTAVPEFRSMPLDERLRLWQGAGGRLNLVLGKLSSGGGTMVTTGNLGLDDRGRPSGEA
QLSVVGPERLVAALGASGLMPADLAGFAPMVMAAGTPTQVDGRKGAAFPFQFRDGRVFLGFIPLGKI
5383 PF09810
(Exo5)
click to view
Estimated TM-score=0.48;
hard target.
>Exonuclease V - a 5' deoxyribonuclease (Length=369)
SPIERFRTQPKKALSVTDLVSPAWCELQYWYTLTKHGRKRRTPAMKQGSAVHKVLEDQVHTTVKVDIETKEDAWGLRIWN
VIQGLKTLRDTGMTRELEIWGTVDGLVVNGVIDELSYICPDAELEESIEKPTTQDEPPPDQTTLTEFFKAEGSSIAEATR
SKRRPQPKKVYLCDVKTRGVKSLPSASAFKPTKIQLMLYHRLLSLLATNTVDFSILTTRYNLDATRTFSDSFIAQVGSLN
EEFFSAKTSQTSNSQSQGLDISQSSQDSTTILLAHNNLNSLWSLMINEFQITLPSGSASLGNVLKAEYRSRDTGEIVGAK
AFMMDNDELTRYVEREMQWWKGEREPVGVVIEEAFKCRSCDFAESCEWR
5384 PF09744
(Jnk-SapK_ap_N)
click to view
Estimated TM-score=0.48;
hard target.
>JNK_SAPK-associated protein-1 (Length=155)
VQSLAGSIYQEFEGMIARYDEDVVKTLMPLLVNVLECLDAAYQQNQEHDVELELLREDNEQLVTQYEREKGARKTAEQKL
LECEDIAEGERKELSSRLEALESIVRMLEIKHKNSVEHAIRLEERETELKKEYAKLHERYTELFKTHVEYMERTK
5385 PF09546
(Spore_III_AE)
click to view
Estimated TM-score=0.48;
hard target.
>Stage III sporulation protein AE (spore_III_AE) (Length=322)
FNVEKITKDLSAGKLEWNMDSLFKKVLGLLLKEIYLNAKIMLQLIVLAIICGILTNLQSSFGKEGVGEVAFFACYIFLVG
VMIKSFTYAVNLGRDVIDNMVMFMQSMVPTLMTLLISTGNITSASIFQPAILFSVQIIGTIIKNFLIPVLFFTTALSMVN
NISDKFHVTKLIDFMKQLGKWCLGILLTGFIGVITVQGLASSVVDGVGSKTAKFAVGNFIPVVGGILSDAVDTVIGCSLI
LKNAIGIAGLIIIVLICFIPVVKIMALITIYRLTGAIIEPVSDKRIVQCITDLGNSLTLIFAMVVSVAVMFLLSITIVIG
AG
5386 PF09489
(CbtB)
click to view
Estimated TM-score=0.48;
hard target.
>Probable cobalt transporter subunit (CbtB) (Length=49)
PISLSQRLIVAVGATLLGLCLVYFAGFSQIEAVHNAAHDTRHSAAFPCH
5387 PF08893
(DUF1839)
click to view
Estimated TM-score=0.48;
very hard target.
>Domain of unknown function (DUF1839) (Length=312)
RQHAPHALHQGERVWQETNCYIDLWIELLHGFGLDPRAALGFTVTQDFEGDQFTFFKFPLEDLERLYGTQVQELAIYDSL
EARVLAQTSRGHTVLVEVDGYYLPNTRATSYRREHPKTTVGIDFIDPTAHRLGYFHNTGYYLLDGEDYDGVFRKLPQFAQ
QPDLLFPYVEFAKQARPALEGTALAEASAELLCAHLNRRPLTNPISQWRAVFPAHLDTLLERGEAFFHPYSFNLMRQLGA
NFELLSKYLLWLSAQGFEVPASIPAAAQSIASESMVMQFRLVRAIARGRRDSCEDCFDVLESAYEKTLPPLA
5388 PF08756
(YfkB)
click to view
Estimated TM-score=0.48;
hard target.
>YfkB-like domain (Length=151)
MYPSDFAANLEVLSLDEIREAIHHLLDIRDESVWMLFGTLPFYPCSTNPEDQALLKRLYESKNVTLRNDPDGRSRLNVNI
FTGDVIVTDFGDTPPLGNIQHDRLPDVFEKWLETPIAKSLNCHCPQVKCLGPNILVKNAYYKNIDFTQRKA
5389 PF08628
(Nexin_C)
click to view
Estimated TM-score=0.48;
hard target.
>Sorting nexin C terminal (Length=109)
WLRRNIKNLLQQLIRATYGDTINRKIVDHVDFMTAPEQVADYVKKFRDSYWPNGILAESPPRRDKNIRMRTRVAAKTNLL
GIMPDELKHIIGADTTRKGILRVFDMFQH
5390 PF08595
(RXT2_N)
click to view
Estimated TM-score=0.48;
very hard target.
>RXT2-like, N-terminal (Length=141)
SNRGRKLKRKARFVHEGALNDAKGPRVYKKEIEFYGKRRKIIYQKEPLRKRNDDSESDAEEDSDDDTTSVSDDLDPYSEI
RIDKILAPCENAADLPSHPSMSHIYTSRTLNDLLQQSLTKLCEEQAHTTKLKNLLTVFLGD
5391 PF08586
(Rsc14)
click to view
Estimated TM-score=0.48;
hard target.
>RSC complex, Rsc14/Ldb7 subunit (Length=96)
DYYDILAGLSAFERSHEVSFTLEELKELVKPKKDDEKKKLQEGSKKSSKRITVHGYLGGKVDLTEASNANYDLSHTLLGG
YVPKKQLESLSSIDFA
5392 PF08509
(Ad_cyc_g-alpha)
click to view
Estimated TM-score=0.48;
very hard target.
>Adenylate cyclase G-alpha binding domain (Length=52)
DMIGPTDRREGGRSGTVFHLDTNLNDMEGILTKPPPLTPMDHTFITNIVDPE
5393 PF08504
(RunxI)
click to view
Estimated TM-score=0.48;
very hard target.
>Runx inhibition domain (Length=106)
NQNQNSHFQTNSSPYHLYYGTGSGSYQFSMVPTGGTGSGGDRSPTRMLTSCTAAGGAGGTGGGNNSLLNASLGNQSDGVD
ADGSHSNSPTAMSASTRIDESVWRPY
5394 PF08500
(Tombus_P33)
click to view
Estimated TM-score=0.48;
hard target.
>Tombusvirus p33 (Length=154)
LAVGMLLTPVCVAAAYATLPREKLSTYRLRSEAREHMEDEKEATECLVVEEARQLKGKDGEDIITGSRLTRVVAKTGRPR
RRPYAAKIAQVARAKVGYLKNTPENRLIYQRVLIEIMDKDCVRYCDRDGVLPLAIGCCFVYPEGTEEASQLWGS
5395 PF08390
(TRAM1)
click to view
Estimated TM-score=0.48;
hard target.
>TRAM1-like protein (Length=66)
IMFITVQYNVTQVLDEKSEPVNLYQYGPKDVATVFFYLLIAVILHALIQEYILDKINRRLHLSKTK
5396 PF08135
(EPV_E5)
click to view
Estimated TM-score=0.48;
easy target.
>Major transforming protein E5 family (Length=43)
MTYGLLLFLGLTFGLQLMLLVFLLFFFLVWWDQFGCRCENMQL
5397 PF08070
(DTHCT)
click to view
Estimated TM-score=0.48;
hard target.
>DTHCT (NUC029) region (Length=99)
KRTPKQKKVIETVNSDSDSEFGIPKKTPTPKGKGRGAKKRKASGSENEGDYNPGRKTSKTASKKLKKTSFDQDSDVDIFP
SDFTSEPPSLPRTGRARKE
5398 PF07903
(PaRep2a)
click to view
Estimated TM-score=0.48;
very hard target.
>PaRep2a protein (Length=122)
YRAVAEWHRQCFGREPMGLIEGIVKRLEEYVAMCQLYKAIKRELGGRASLYASDFSLRRAFWWDGEWMGAPASCFVTERE
AVCKWGNAKWKFLVRTTTDGVYIKPESPLYQEWIKVVHRCGD
5399 PF07874
(DUF1660)
click to view
Estimated TM-score=0.48;
hard target.
>Prophage protein (DUF1660) (Length=64)
MKLLCKLFGHKWEPVPFTMTRDYCERCFIEKENPHGCITGNFNRSDLDESENVFPEKWLDKHMD
5400 PF07863
(CtnDOT_TraJ)
click to view
Estimated TM-score=0.48;
hard target.
>Homologues of TraJ from Bacteroides conjugative transposon (Length=65)
FMIIGIVGYFTVPSVANYIVHAGGGGALGQKVTSMFGSTSRSVVNTASAGAGMAADAMGNAASRI

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