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●I-TASSER ●QUARK ●LOMETS ●COACH ●COFACTOR ●MetaGO ●MUSTER ●CEthreader ●SEGMER ●FG-MD ●ModRefiner ●REMO ●DEMO ●SPRING ●COTH ●BSpred ●ANGLOR ●BSP-SLIM ●SAXSTER ●ThreaDom ●ThreaDomEx ●EvoDesign ●GPCR-I-TASSER ●BindProf ●BindProfX ●SSIPe ●ResQ ●IonCom ●STRUM ●DAMpred

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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13

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Modeling of Pfam protein domain faimilies by C-I-TASSER (Page 21)

Search by Pfam ID:

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# Pfam ID C-I-TASSER models ranked
by estimated TM-score
(click to view)		 Full name and representative sequence
2001 PF01644
(Chitin_synth_1)
 click to view
Estimated TM-score=0.64;
hard target.		 >Chitin synthase (Length=170)
MYNEDQTLFSRTLAAVMDNIAYLCSGTHQGWNESSWQEIVVVVVSDGAAQVNHDTLHVLSIMGIYNHGIPHASVNGVPTR
AHLFEFTTQVRVDRHLNAHFSGSQPQTFLDRPAMPMQMIFLLKEKNAKKINSHRWFFNAVCEELDPEVCILVDVGTKPSR
KSFYHLYRAF
2002 PF18865
(AbiJ_NTD5)
 click to view
Estimated TM-score=0.63;
hard target.		 >AbiJ N-terminal domain 5 (Length=90)
SSQMQQLFALHEYIRDQFTKMDWIKLAYITDSLDLIEDHPRLLRSLDFNDDDYEGNSLQVLARIVGNDSAYLADIEQFVN
DKKANGKKPP
2003 PF18849
(baeRF_family7)
 click to view
Estimated TM-score=0.63;
easy target.		 >Bacterial archaeo-eukaryotic release factor family 7 (Length=148)
FYLLALSQNQIRLFQGTRYSVSEIDLEDVPQSIAEALRYDDPEKQLQFHTGTAQGGGGDRAAIFHGQGAGEDDQKENILR
YFRKVDSGIEELLKNQQCPLILAGVEYLFPIYKEANNYPNLIDEGVTGNPDISKPEELHAQAWEVIQP
2004 PF18847
(LPD29)
 click to view
Estimated TM-score=0.63;
hard target.		 >Large polyvalent protein associated domain 29 (Length=93)
TCAETAKLIRKALKEAFPGVKFSVKSHTYSGGASINVSWTDGPNADQVEAVAGHFKAAYFDGSIDYKGSIYHMMEGQSVH
FGADFIFCERQYS
2005 PF18824
(LPD11)
 click to view
Estimated TM-score=0.63;
hard target.		 >Large polyvalent protein-associated domain 11 (Length=68)
SFKYQLLDRLRSDCEYYLGYGNRNVNHLWANNEKEQIEKMKELYNSFPDNEKPEWLTYEQILQYERLM
2006 PF18727
(ALMS_repeat)
 click to view
Estimated TM-score=0.63;
very hard target.		 >Alstrom syndrome repeat (Length=47)
QMALTHSHLTEESLKVSDNSEPADQKYGMPIEPPPSYPYREKPSILY
2007 PF18716
(VATC)
 click to view
Estimated TM-score=0.63;
easy target.		 >Vms1-associating treble clef domain (Length=41)
NTRRCWLCGESLLGHIPFHYLDFSFCSTKCLQAHRQGKAAP
2008 PF18658
(zf-C2H2_12)
 click to view
Estimated TM-score=0.63;
easy target.		 >Zinc-finger C2H2-type (Length=67)
RRYYQERWKMEYLMDYDCLRHGLVCMVCGSALATLKLSTIKRHILQKHQDTMLLSHAEKEVVIATWV
2009 PF18145
(SAVED)
 click to view
Estimated TM-score=0.63;
hard target.		 >SMODS-associated and fused to various effectors sensor domain (Length=193)
RANFGDKIKQKQEKGIIKHLSVFGLAPQPLLILLGSLLGDLHPTEVYQLHREPKTWKWLNETDEVTFEVIKPQNSYSTIA
LVFALSATITEDRIVTVLGEECSIWTFTVNKPNNDFLRNREQLTRFRTELRLLLNEIKAHHGQNNLIHVFPAMPNAMAIE
LGRVRMPKADLPMLVYDQNFQNPAGGFYPTIKI
2010 PF17247
(DUF5316)
 click to view
Estimated TM-score=0.63;
hard target.		 >Family of unknown function (DUF5316) (Length=73)
DWNLLVMLSGTVSLISILISGLLFGVFTSGEQNRANFHTESKNDRKKRQKIGGCVLLFGLPNMIAVLVYYLVS
2011 PF17187
(Svf1_C)
 click to view
Estimated TM-score=0.63;
hard target.		 >Svf1-like C-terminal lipocalin-like domain (Length=171)
MKPHHAAKAWNFMFFHSKENTMVLMEFTTPKSYSNTKVSIGIITNDKEILAVTHDNSALHLNQEIDSVGWNVPKQIRVEL
KGHKSSAKDEDVEADNDEHKIKAVVEGPLENMVERIDVMGEVPNFVKNIVSGVAGTKPYIYQFGDAENFHFQLDDGEKKN
GLAWVEVTFIS
2012 PF17107
(SesA)
 click to view
Estimated TM-score=0.63;
easy target.		 >N-terminal domain on NACHT_NTPase and P-loop NTPases (Length=122)
ISAIIGIIDGTSKLVKTIKNSRDLPDGFKAVSERLPLIRAVLQAAERRIKESTEGQGDFGTIQVLLESCQDQALRLKSIM
QEVTIQPGATFADRSLLVVRRLSKESKMEQLMKKLLENVQLL
2013 PF17090
(Ytca)
 click to view
Estimated TM-score=0.63;
easy target.		 >Uncharacterised protein family (Length=64)
APNIDIIGSFFPVWMLCLAIAIALSFVVRVFLVRLKMESEVGPLALFYPCSVIFFTSLMWLIFF
2014 PF17000
(Asp5)
 click to view
Estimated TM-score=0.63;
easy target.		 >Accessory secretory protein Sec, Asp5 (Length=70)
EYLFFVLEAVLSVVFIFLMTIQPRQQQTFSEDVTSQIGRPSYWRSKRGLKITTVLVAASFLLVLLCHMLL
2015 PF16965
(CSG2)
 click to view
Estimated TM-score=0.63;
easy target.		 >Ceramide synthase regulator (Length=403)
MSSTALWFAVVLSYVIQTRGFSHIQSRTFLSNLKAPAKATADAAAQAAQAAQESYGTKTLTVYLTFIYFASWLLVLPLSR
LWKDDAKPLLPLENSIASNSSLSLDHDEDDEIDNVIDTVTVDNLLENEGKQEEFSLLSVATAKYVAKLSILAVLAVVNIF
TYNMALSLSPAFDVALIENTSIFEIVTLLYGVCNISRKNYVFRNFFVMMVALIGILIVSYTKATCDLLAGKLSINQDTGE
VNDPFLFDRLKGGLICGLGALTMGPFAVLWNRWFTAKGAMRTTLAQQSQHLGLIGCISMLMLLPFLPALSTSNDYISLLY
TDKSFWLTIMGSIIFGILPNLLSLIQLNRTAPPEYITTCFLGIIIFMGLADWVTEPTQTMIVRWEVIGYLMLAISCVTLS
YTL
2016 PF16468
(DUF5049)
 click to view
Estimated TM-score=0.63;
hard target.		 >Domain of unknown function (DUF5049) (Length=57)
MDEKVKEQILAIRDTGLTNMFDVNTVQRLAYERDFYELVLYLEDHRKEYVNFILTGE
2017 PF16466
(DUF5047)
 click to view
Estimated TM-score=0.63;
easy target.		 >Domain of unknown function (DUF5047) (Length=134)
GEVRLDSGQALRSQLSLEIDGTGLWPQYGSDLLTPYGNEVFVERGIAYGNGAVEWVSLGYHRINTIEQDVPPNGPIEVTA
VDRMAAIVDSKLTSPVQFGAARTNASVVAQLVTEAYPAAVIEWDEPTVANAPIG
2018 PF16412
(DUF5020)
 click to view
Estimated TM-score=0.63;
trivial target.		 >Domain of unknown function (DUF5020) (Length=212)
AQNIQLHYDFGRSLYDKDLKDRPVLTSTVEKFHPDKWGSTYFFVDMDYTSDGVAAAYWEIARELKFWKNPFSVHVEYNGG
LAKGFSYQNAYLGGVTYTYNNTAFSRGFSLSAMYKYIQKHHSPNNFQLTGTWYMNFSNNLLTFSGFADWWREETAYGKTI
FLTEPQFWVNLNRIKGISDKFKLSVGSEVELSNNFGGRDGFYVIPTLALKWT
2019 PF16296
(TM_PBP2_N)
 click to view
Estimated TM-score=0.63;
easy target.		 >N-terminal of TM subunit in PBP-dependent ABC transporters (Length=84)
LFLVAFQVFPVLYTASTAFTNFGDGHRGSKQDAIVAIQTASVKQVPGSAEYALTVATKGDPATGPLVFLVTDPATGTVSV
GDAD
2020 PF16260
(DUF4914)
 click to view
Estimated TM-score=0.63;
easy target.		 >Domain of unknown function (DUF4914) (Length=612)
LPKELENILTKGTKVVIPENRDHLIRLAMGGEDKDIFEVAYDIPGNGRVVEATVARCKNGAAVNYTDIYMRRRDPDCMVV
ADRRETDKPRYQDRYGENFEPLRNTTFGWLEKQNLIVMPFMAGGQELGYPALLVAPDNAGFFAAGLADLQGFIPKDSIPD
GFKPKAIIYLAPPFRHTHFNQKQIVVHNRLDGMHELFSYNLYPGPSAKKGIYGVLLNIGEAEGWVTVHGSTVRVVTPYDN
IITIMHEGASGGGKSEMIEQIHREMDGRIVLGKHTVTGEKLYLELTDTCELQPVTDDMALCHPSLQNGSKKLVVKDAEQG
WFLRINHINKYGTDPHYEKLCIHPKEPLIFLNLEGIPGSTCLIWEHTMDEPGKPCPNPRVIMPRRFVPNVVDEPVEVDIR
SFGVRTPSCTKERPSYGIIGFFHVLPPSLAWLWRLVAPRGHDNPSITDTVGMSSEGVGSYWPFATGKMVDQANLLLEQII
NTTNTRYILVPNQHVGVYKVGFMPQWIAREYLARRGSAKFRSEQLVASRCSLLGYSLETLKIDGKYLSKGFLQVNCQPEV
GNEGYDAGAKILTDFFKKELTKFISPDLNPLGKQIIECCMSDGTLKDYLELI
2021 PF16137
(DUF4845)
 click to view
Estimated TM-score=0.63;
hard target.		 >Domain of unknown function (DUF4845) (Length=85)
RMVPAYMEYNTIRSAITSLLEDSQSALMSEREVRNALSKRFTINQVTAISANDLEIDKEGGELVVGVDYEVRQPLFYNVS
VVMHF
2022 PF15887
(Peptidase_Mx)
 click to view
Estimated TM-score=0.63;
hard target.		 >Putative zinc-binding metallo-peptidase (Length=250)
IARWQSLERAKHRLVFSLLQLGLPVVSKTENEETGLAFDFLADEQKPEGEKVLTGHDNGLITINIKEADDVEREMARKNM
HEVYRTLLGHFRHEVGHYYWDRLIADSPHLAEYRRLFGDERADYAQALQRHYDQGAPADWQEHFISAYATMHSWEDWAET
WAHYLHIIDTLQTASAFGIRVQPRVGEEADNLTVAVTQDPYQTEGFEDIIEQWTPLALALNSLNRSMGLKDLYPFVIPPA
VVEKLAFIHT
2023 PF15874
(Il2rg)
 click to view
Estimated TM-score=0.63;
hard target.		 >Putative Interleukin 2 receptor, gamma chain (Length=95)
HGDNQEFLVNSNCSVLLLLHYIRKKMGLRKTDTIDLCDETGTMKLLFLTKTPGDYASKFLTARNTYYVCKVERGAAGTRI
ENSYKAVVPLLKNPE
2024 PF15656
(Tox-HDC)
 click to view
Estimated TM-score=0.63;
hard target.		 >Toxin with a H, D/N and C signature (Length=129)
NGRTIWGSDTKIRGLDIKYPLEQISRRPSNGDIVLLSGSHGVQNGDNWLINGSRRGSLLHFPFFKSDMTVYGGSWKGRTV
HVRNLATMSEIDFGTLLNNGNSHIILGYCYGRNDQALRYHRNLLSVTSY
2025 PF15603
(Imm74)
 click to view
Estimated TM-score=0.63;
hard target.		 >Immunity protein 74 (Length=79)
ILDITRGHIKVKIGGKTVTLQGEMFFPGNDKMGFVLYRNSIKNWDEPNQDLPITPDEVDAIMDDIRNDFAKGGHTFAVE
2026 PF15585
(Imm7)
 click to view
Estimated TM-score=0.63;
hard target.		 >Immunity protein 7 (Length=129)
MFEYHGWVTIQASPSGDDDAALLERIVERVHRAVRDFDDGDLVDLRWAAGVPMLHLGGMDKHGTAIAPELVDLFTRVGDL
APGSYGLLHVWDDQDPEHDNEFKVYRMARGLVTERADEHLSPVAPTVLD
2027 PF15575
(Imm49)
 click to view
Estimated TM-score=0.63;
hard target.		 >Immunity protein 49 (Length=218)
DPSASEIETWEAVVSAMQVGSAVFASASAPEGTVQCRINHEMRIIPATGPQPFADAGNWLTALWFAIVCRDQKRMTQLCG
LPLDLLRASGAEYDEYIYHWVDSLQTYWLEGPGLVEKLVAAIEMSDPSVARIATREQLNKILYQPINLFRCFLRKDHAAF
NEALQEALELHKSYWTANEEREESPAGYLALGPLAITCLAYDAGFPIEVESDYLPKHL
2028 PF15054
(DUF4535)
 click to view
Estimated TM-score=0.63;
hard target.		 >Domain of unknown function (DUF4535) (Length=45)
SSFMFMVGTVCGVYIAQNYNVPNVRKLANTGLVMAKHIEENYRKP
2029 PF14958
(DUF4506)
 click to view
Estimated TM-score=0.63;
hard target.		 >Domain of unknown function (DUF4506) (Length=140)
VILKRNVNSQDENPCFLYLRCDPPGGEEIVSIGILSSARNMEVYSGEEYCGTSRGKNVCNVLDNSEHEKIILYKKYLKLE
SSAHACKIKLLSFGEKQCVFISKVVVHMRPVLANSSAGCPALGSRIDLERVQTIIESLGS
2030 PF14769
(CLAMP)
 click to view
Estimated TM-score=0.63;
hard target.		 >Flagellar C1a complex subunit C1a-32 (Length=98)
YTIQFSREQSFNREQTSAFFSIVKDVHEACVETPLPNVEECYKYFSELMFCHSIRRPPFSIDLFSQDQLVLITDYMINSY
FRHYKLYKYAFTPQVRLD
2031 PF14742
(GDE_N_bis)
 click to view
Estimated TM-score=0.63;
easy target.		 >N-terminal domain of (some) glycogen debranching enzymes (Length=200)
VKDDDLFLVTDTMGNISSCSPDESNSSMGLFCRDTRFLSRLELQINGRSPVLLSSTTDKGFALSVLCTNPKITEELKPDT
IGIHREIVLNGALFEEIEIANYSTTTINFELSLSFDADFVDLFEVRGHSREKRGQILRLIEKNTEHQKEESLTLAYQGLD
NSIMESRIQFQHRQPDDFQGYTAIWRLELGSHETQKLGYR
2032 PF14441
(OTT_1508_deam)
 click to view
Estimated TM-score=0.63;
easy target.		 >OTT_1508-like deaminase (Length=63)
THAELLLIDYIEQHEEIRETNDKYIGCSKPACYLCHLYIRHHPGNYALPDTSNKLYVKWRIPD
2033 PF14426
(Imm2)
 click to view
Estimated TM-score=0.63;
hard target.		 >Immunity protein Imm2 (Length=60)
MLEVLALILSAGRSSDKVKRYHLDIIHGLLKEIKLSSVLDDLPSDEAAELRDDLRVLGLY
2034 PF14391
(DUF4421)
 click to view
Estimated TM-score=0.63;
hard target.		 >Domain of unknown function (DUF4421) (Length=313)
TDSSYIEPQHYNYTVMLQNTNTYEEYTLSSKEGQRISFAPDPTFRLGPYLGWRWVFLGYTVDLKHINASSQHTNKKEFDL
SLYSSMLGIDLFWRQTGNDYHVQRMNLSSELDTSPMHKVPFDGFKSSIKGFNLYYIFNHRKFSYPAAYSQSTCQKKSAGS
MLLGIGYMRHTIDVDWDKLSSIVDEKLGKKEDGKSRIDSTLTFSKVKYSDISVSCGYAYNWVFAKNFLFNASLSVGLAYN
KSKSDTEHSRLDIHDFSFNNFNLDGIGRFGIVWNNTKWYAGASAVIHTYNYKKEQFSTNSSFGSLNIYVGVNF
2035 PF14379
(Myb_CC_LHEQLE)
 click to view
Estimated TM-score=0.63;
easy target.		 >MYB-CC type transfactor, LHEQLE motif (Length=46)
EVKEALRAQMEVQRRLHEQVEVQKHVQIRMEAYQKYIDSLLEKACK
2036 PF14234
(DUF4336)
 click to view
Estimated TM-score=0.63;
easy target.		 >Domain of unknown function (DUF4336) (Length=321)
KDTVWTFDQLQGIFYVVVPVRMTVVKLQGGGLLVYAPVAPTRECIRLVKELVEQHGNVKYIILPTISGIEHKVFVGPFAR
YFANAQVFVAPNQWSFPLNLPLSWLGLPPKRTSLLPEDSRQTPFADEFDYAILGPVELGPGRFEEVAFFHRRSHTLLVTD
SVVSVPEEPPAIVQLDPYPLLFHAKDNASDIVEDNQANRRKGWQRISLFALYFQPSVLEIPTWSEVFRNALKAPERSKKA
YFGLFPFQWQEDWKRSFDALRGNGRLFVAPILQTLILNRAPKETIDWADKVASWDFQWIIPCHFDSPIQAQPHQFRQAFS
F
2037 PF14190
(DUF4313)
 click to view
Estimated TM-score=0.63;
very hard target.		 >Domain of unknown function (DUF4313) (Length=102)
MEIGNYPEDKNIRICLYTEKDQEVWEVFELTVDMGIPLGKNRTFLIPGYDLNEIVEFLKENDMGQLKKETCCSGCMEYPM
FEFKEETLKRLDPKGYAQYEQA
2038 PF14137
(DUF4304)
 click to view
Estimated TM-score=0.63;
hard target.		 >Domain of unknown function (DUF4304) (Length=119)
LAPLLKNNGFKKKARNFYREYSDRVEVINVQASQWNEGNEGKFTINVGVYYPEISKILEAPPVSGAPKEYDCTVRERIGL
LTPENKDHWWHIDGSVNDLEVAENVANQVEKICFPWLSE
2039 PF14130
(DUF4297)
 click to view
Estimated TM-score=0.63;
very hard target.		 >Domain of unknown function (DUF4297) (Length=205)
REKAGSETFEKYSYQYHWALYRVLNDHIKANEYAVFVELHEDVVVSDSLDASKAKFEFNQVKTTKGRFTANKLVHQKKNK
KCVLGKLISSGFEKPFKDRITELNLVALNDFSLTLKEEGLSLNKITLNDLSDAQFKELEDEIRKEMGISSLPSNIQFIVP
ELSEKNFQNDVIASIAKLVSNLFPNSHCSPVEIYRLLIDEINRKG
2040 PF14097
(SpoVAE)
 click to view
Estimated TM-score=0.63;
hard target.		 >Stage V sporulation protein AE1 (Length=180)
RVILVTDGDEFACRTIQYIAEQIGGRCISRSHGNPTKLTGEELVELILQTPYDPVFVMFDDCGAIGEGVGEQALKYVATH
EQIEVLGAIAVASNTHKHEWTKVHISIDRDGNMTEYGVDKEGIRELEISRINGDTVYCLDQLNIPVIVGIGDIGKMGYRD
HIKYGSPITRQAVELILERS
2041 PF14087
(DUF4267)
 click to view
Estimated TM-score=0.63;
hard target.		 >Domain of unknown function (DUF4267) (Length=107)
ATIFIGFGVNAILRPDHALTFFEFQPPTSVVDKQMVDSLMAVYGVRDIFMGIAIYVASYFGTRSTLGWILLAASSVAFAD
GIVCWTHGQGQWNHWGYAPMIAVAGSM
2042 PF14068
(YuiB)
 click to view
Estimated TM-score=0.63;
hard target.		 >Putative membrane protein (Length=100)
LLISMLLFLVLFFGIGFLLNMLLRMSWIMAIVYPIVCIFIIDEVRFIEYFQKPGDSFSSLGHKITSLALADILILLSGLI
GAILSGVVIKMLRKRGYQMF
2043 PF14063
(DUF4254)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF4254) (Length=143)
HLLYRKNWIDTVQWHYEDIIRDPHIDPVAALDLKRKIDASNQDRTDMVEYIDSYFLDLYKEVKPLPEATINTESPAWAVD
RLSILALKIYHMEEEVNRPDATPEHRAKCQEKLNVLLEQKKDLSTALDQLLDDIAAGRKYMKV
2044 PF14043
(WVELL)
 click to view
Estimated TM-score=0.63;
hard target.		 >WVELL protein (Length=74)
EYFERLTNYLLEKNPALAYAQARTWVELLWEDFETTYARAGHEYRGKEMTEKVVRQWIDRYGATLHEFQATNPK
2045 PF14039
(YusW)
 click to view
Estimated TM-score=0.63;
hard target.		 >YusW-like protein (Length=87)
LFELQIELLSNEEWSYEFNRSNQKAKIEHENGAESEKSGEEVFSKIEELLSSIQIDYERSINDMMSQILDYLNISRDDLK
EIDVYIE
2046 PF14018
(DUF4234)
 click to view
Estimated TM-score=0.63;
hard target.		 >Domain of unknown function (DUF4234) (Length=68)
RNIVLAIILTIITCGIYGIYWMYVLNEDINKLSGHPEATSGGMVILFTIITCGIYGLYWYYKMGERVE
2047 PF14007
(YtpI)
 click to view
Estimated TM-score=0.63;
easy target.		 >YtpI-like protein (Length=86)
VILIIFSLSFYAYYKMKYFRSQRPLERRWLSAKSSIALGLFVFFFGINQFFLHSSTVTYIVGIIFLLVGGGSAWAGYRSY
KHYLPL
2048 PF13858
(DUF4199)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF4199) (Length=158)
FGTYLGGYWILKFILFPLGLTIPFLSFLFVGLTLCVPFMGYYYVRMYRNTVCSGSISFLHAWIFTVFMYMFAALLTAVAH
YIYFRFIDHGFVINAYESQIDILNKSGVPDIEAYTNMFQETLETVKSLTPIDITMQLVSWNVFCGSLLALPTALFVMR
2049 PF13852
(DUF4197)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF4197) (Length=200)
TDNGTIVSGLKEALSVGTGNAVTSLSKMDGYFGNQMVKILLPEKVQTAGNVLGKLGYQKQVDDFVLSMNRAAEKAAPKAK
AIFVDAIRQMTFEDARNILNGGNTAATDYFRSKTSAKVFNAFKPIVSSSMDEVGVTQAYKAMIGKYTSSIPFAKTESLDL
DTYVTNKATDGLFYMVGEEEKKIRTDPAARVTDLLKKVFG
2050 PF13754
(Big_3_4)
 click to view
Estimated TM-score=0.63;
trivial target.		 >Domain of unknown function (Length=105)
MVKRVFGRVDGCEVELNRSEGDWWNVPVPFDTDGEYVVEILAEDEAGNQAYIAKMLFVVNTALLCAHVEPVPYYGQLLET
EWEAELVAPQIYTELLVEGGKRCNG
2051 PF13728
(TraF)
 click to view
Estimated TM-score=0.63;
easy target.		 >F plasmid transfer operon protein (Length=231)
GWFWYEVQPEPVLKRKPEPPQPPPSLPTMTAESPSKPITSAEPKPFTSAWLRKNMETYLNKAIDEPTHENVAAFYYLQRV
MMDKAERFTNTARYVVMSDPQLDETVRRPVATYAANEANHQASVMADRALKDIAGQAGILFFFRSDCPYCHVQAPVLNML
EKAYGFKIYPVSLDGRPMPNGLFGNFKLDQGQAALLGVEQTPALFLMKPPRQIVPLSQGALSLEELTSRIL
2052 PF13687
(DUF4153)
 click to view
Estimated TM-score=0.63;
hard target.		 >Domain of unknown function (DUF4153) (Length=222)
LFLGLVAIIATVDLLFSVNISGNIYFDIWIIVAGVFAPAFFLADIPESRQELDVKQYAKVLKVLLLYIIMPLIVAYSTIL
YAYFIKIIITRQWPDGILANLVLWFSIISTIVLFFISPLRNSSKWVEKFMAIFPIALIPLLTMMFISIGIRVSAYGITVN
RYLVLAAALWVTGCMIYSIWDKGRRNIVFTISLVFISIVSVTGPFSSFSISKWSQNNRLEKI
2053 PF13655
(RVT_N)
 click to view
Estimated TM-score=0.63;
hard target.		 >N-terminal domain of reverse transcriptase (Length=83)
WRHIDWRKLEKRVFKLQKRIYKASERGDVKAVRKLQKTLMKSWSAKCLAVRRVTQDNQGKKTAGVDGVKSLTPKQRLTLV
AKL
2054 PF13559
(DUF4129)
 click to view
Estimated TM-score=0.63;
hard target.		 >Domain of unknown function (DUF4129) (Length=72)
RLRAIVRMLEEKGVLDPRPGRTAGELVAEVARIAPAGDGQTALAAAVEVFSEIWYGGRPATAAGYQVLVDAD
2055 PF13449
(Phytase-like)
 click to view
Estimated TM-score=0.63;
easy target.		 >Esterase-like activity of phytase (Length=306)
TEVGGFSGLTYDADNGVYYAISDDRSNVNPGRYYTLDINLNGGNGLDVSVAEVTTLLDENEDVFEEESLDPEGIVLTSEG
TVFISSEGNTEELVNPFVNEFALTGEQLNELEIPQKFLPTADNSSGIRNNLAFESLTIDPQERFLYTGIENALFQDGPAA
GIDQTSLARIIQYDLATGEPTAEFVYETDNANAPAGTPDSVDRTNSLAELVALDNSGTFLALERYFDDNGLNQNKLYLAS
AQNATDVSDFDSLVGQDIVVAEKELLVDFNDIDTNFDGLDDFEGLALGPVLPDGRQSLIVVSDNDF
2056 PF13383
(Methyltransf_22)
 click to view
Estimated TM-score=0.63;
easy target.		 >Methyltransferase domain (Length=259)
DLAASHSFGFFDDIPNETWKLMRSKALAFQHYMYRNSPDIGSERPWFWYLNNLQPDFTCSHVFRVGGHGDGPKWVCDPHR
LRKKEDDCLVYSFGSNGQYQFEDGLIDLIGHERCEIHVFDFGNFDRSQNAGRNIHYHKWGLGSSYDEAYNIKLKSSGRHL
EILTFQETQQRLNHVNRTIDLFKIDCEWCEWSNYKDWVDVDARQILVEVHGLPSTNPATNPLNTKGSDFFNAFRENSYAM
FSKELNPYNSECYEIGYIK
2057 PF13331
(DUF4093)
 click to view
Estimated TM-score=0.63;
hard target.		 >Domain of unknown function (DUF4093) (Length=88)
SLGVEHANFAALNQALSEVFGEKSSLTDSSADLTQTDLMRFGLIMAADSRKRREFLCEQLRIGYANGKQIKKRLNMFKIT
IEQIEKVM
2058 PF13316
(DUF4087)
 click to view
Estimated TM-score=0.63;
very hard target.		 >Protein of unknown function (DUF4087) (Length=95)
ATENRCGWLQNPTPANWWLIDRDGTWTISAQGGYQARGIDNMPSLSDREYVTTNGSYGYGCACLRVVTDRKQMRIISIQS
GRQLPLKTCRQDPKL
2059 PF13276
(HTH_21)
 click to view
Estimated TM-score=0.63;
easy target.		 >HTH-like domain (Length=57)
DDWLKREIQRVYDENHQVYGVRKVWRQLLREGIRVARCTVARLMAVMGLAGVLRGKK
2060 PF13268
(DUF4059)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF4059) (Length=72)
MFLEIFSLYIQGLLLSIISVFLVGVFWNFWRARRKYDKTAKERQAFLYDILMISIMVIPVLSFAFMAILLMF
2061 PF13255
(DUF4046)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF4046) (Length=90)
IIDIYDAVIEGKLAILPRNFWGKYEEEVQHRLKLCFRYLVLQKLKIKPHEIRLRVQKPFLIKYKLFNAVYQRQSKGLREL
LMHIFPEIGY
2062 PF13250
(DUF4041)
 click to view
Estimated TM-score=0.63;
easy target.		 >Domain of unknown function (DUF4041) (Length=56)
KLVLRAFNGECDAAVSKVKYNNIQTMENRIQKAYDSLNKLSQTTHCEITPGYLNLK
2063 PF13239
(2TM)
 click to view
Estimated TM-score=0.63;
hard target.		 >2TM domain (Length=78)
QAEKRVKAIKGFYINLLIYFIANAVLVYINLVYTPDVHWFWYSILSWGIGMLLYGIVVFHGIPFMNSNWEEQKVIALI
2064 PF13197
(DUF4013)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF4013) (Length=159)
LSFLIIPTFLVIGYLLRVVRATMRGDEEPPEFDEWGDMLVDGLKGFAIAFVYFLIPAIVALVFGFAGLIGIVAGGGSDAA
GAFGGIVTLLGLLVAFVLSLAAAYLVPAALANYAETDRLGAGFDFGTLRPILTSGKYATAWLTAFVVLFAASLVVGILN
2065 PF13160
(DUF3995)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF3995) (Length=123)
LVIVSLLHFYWAFGGKWGIDSVIPTTADHARRTFSPGKGGTIIVACLLACAGYILLAQSGYLSPVLSPSLIQWGCMVCAA
VFVLRAVGDFNYIGFFKKVKNTKFARQDTALYTPLCLWLGISF
2066 PF13125
(DUF3958)
 click to view
Estimated TM-score=0.63;
easy target.		 >Protein of unknown function (DUF3958) (Length=107)
KTWTEWQQEERRLMEKVDENQQKRRAVQQLQEAYENHFRQGLRFVEEVSWQFRKNDRAFLREQMQERVFSLSRSTRAHFE
EMEEVFQQEKRDLEDQADEVAYGKRKA
2067 PF13104
(DUF3956)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF3956) (Length=45)
MDSCVVFVNGQPFLVLSIAGIEIARLEISLQVALALRVLGIPICD
2068 PF13034
(DUF3895)
 click to view
Estimated TM-score=0.63;
easy target.		 >Protein of unknown function (DUF3895) (Length=76)
DELLQNSIFDYVQSASIISAKELSVYLVDKCNAPNETFSTGRYKIYGDVCKFLDYLAKQGIIQLLRKDGVNDRVYG
2069 PF12990
(DUF3874)
 click to view
Estimated TM-score=0.63;
easy target.		 >Domain of unknonw function from B. Theta Gene description (DUF3874) (Length=70)
CPAEDVFNCCFRVALPEEECLHLSAAEIYQELKKMNSAALRGFNPNQFAQVLTKMGVGRKHTEYGNVYSV
2070 PF12922
(Cnd1_N)
 click to view
Estimated TM-score=0.63;
hard target.		 >non-SMC mitotic condensation complex subunit 1, N-term (Length=165)
HALSKIFDLVMSGLSAEADSVHSDIDSPDEQDSVPHHKKLLEMYGFLLQWTIAAVETKAAEKSSTAPAARGRGKGKKGAA
KDKDAAWDSATQLQGALEVMCKVLKLKLSKIFLTTSERDTFIGLLTRPVYMVLESEQRVKTTTIRMHCFKVLCIAVKHHG
HGYAA
2071 PF12890
(DHOase)
 click to view
Estimated TM-score=0.63;
easy target.		 >Dihydro-orotase-like (Length=139)
KQLFFILIAFFTVAVPAVAQQLKTTRWDSYGVSFKAPADLVVEDDSSEGYIAGNDTYYLTIQLLEGEGLKKEELGQELKA
IATDDEVTSQSSVQSFELPQFHGVQLKGNCEEEKCVYSYLLAKDGSCGFYVSIVYRQEN
2072 PF12810
(Gly_rich)
 click to view
Estimated TM-score=0.63;
hard target.		 >Glycine rich protein (Length=245)
EQNVTLKPGKYKLECWGACGGGWFSEWTKGAKGGYSKAELTLKKETILYVYAGETGCQKFENSINNWTGFNGGGRGTNAG
ADPKFILCGGGATDIRLIRGSWSNEQGLLSRILVAGGAGAISSSDYGVGNGGGMEGSKGFDGSNAFVTGGTQYQGGIGLE
DKYNGSFGRASSTGTGQGGGGGWFGGAGGLNYNAAGGSGYALTKDSYKPPGYIPTSKYYLDNVVMTTGGNTTKADGYAKI
TLLQA
2073 PF12784
(PDDEXK_2)
 click to view
Estimated TM-score=0.63;
hard target.		 >PD-(D/E)XK nuclease family transposase (Length=228)
PYTDFGFKKLFGTEMNKDLLISFINSLLSGKEVVKDLTYLNTEHLGTSEADRKAVFDVYCENENGEKILVEMQRGEQQFF
KDRSLYYATFPIREQGQKGEWNYRLKAVYVIGILNFTFDEQSNDYYHHEVKLIDTRTKEVFYDKLTFIYLEMPKFNKKEE
ELNDMFEKWLFVLRNLSRLLERPKALQERIFTKLFEAAEVAKFTKAEYDSYEESLKVYRDWINTIETA
2074 PF12600
(DUF3769)
 click to view
Estimated TM-score=0.63;
easy target.		 >Protein of unknown function (DUF3769) (Length=442)
GGEVKRLRFEARQIEFYPRGWQARNVRITNDPFSPPELELRADQVTLTREAPLIDRITTQRQRLVLDQNVVIPIPVNQQT
IDRRERETSPFIVSPGYDGDKRGGLFVERGFTVINTEQTRLGITPQFFVQRAIQGSDNLASLFGVKARLNAVLSPTATLQ
GSGELTSFDFDTIDENLKASLRLRQTLGNVNPHVVNWEYSYRDRLYNGTLGFQTVQSSLGGVITSPVIALGQSGVNLSYQ
AGAQYINANTDRQDLLDVNRDNDRISLGRLQGSVALSKGFLLWQGKPLAPTATEGLRYTPTPVVPYLQAVAGVTGTTSYY
TNGDNQNTLTGSIGLLGQLGNFSRPFLDYTAFNVTYSQGLNSGLSPFLFDRSVDNKVLSAGISQQIYGPLRLGFQTSINL
DTGRESSTDYIVEYSRRTYGITLRYNPVLELGGLSIRISDFN
2075 PF12552
(DUF3741)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF3741) (Length=44)
REKFAEAKRLATDEKLLHTKEFQEALQFLSSNKDLFLKFLDEPN
2076 PF12512
(DUF3717)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF3717) (Length=65)
LTITDLEAAINYWRARSPSQGDELRLCAEASALAKPYALMIVQGATRIAPEQLSEKARAAFEAWR
2077 PF12432
(DUF3677)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF3677) (Length=81)
LLRLLTATCGYKEVRQMAVQRLEMWLQNPKLTKPAQDLLMSVCMNCNTHSSEDMEVISNLIKIRLKPKVLLNHYMLCIRE
L
2078 PF12339
(DNAJ_related)
 click to view
Estimated TM-score=0.63;
very hard target.		 >DNA-J related protein (Length=125)
DLADQVLELLLAAPDGLAEYQLIQQLKQRHSGHIPNLPLTDKLVLFRTHFLLFNALYRLRERLWQEGRHQLQIAPLCIRL
LPYQAGSAALSERDGLRDYYLDMSNLRDTDERDVERLLASFWTRM
2079 PF12338
(RbcS)
 click to view
Estimated TM-score=0.63;
hard target.		 >Ribulose-1,5-bisphosphate carboxylase small subunit (Length=47)
ASSVLASTAAVASAAINRSAPRSSTVAPFTGLKSNSAFPVTRKPNKD
2080 PF12262
(Lipase_bact_N)
 click to view
Estimated TM-score=0.63;
hard target.		 >Bacterial virulence factor lipase N-terminal (Length=241)
KVTFESEVQALLDRGTSISFTIQGANADVPAPSYLLMDTSDGTLGLPTNGDDALTNPRASMNTMDGWSTSMPIVLNFKGD
GFAPGMLASGVKVIKINQRLTEWDGKTNPIAKVLVQNQDYVVQANGKSLYVQFADSLDESSEYIFAVTQDVTDVNGEPIG
TSSSYAVAKSKQVKYESGDLASVQAVTEAVEGIFGLAQVNPADIVYSSWFSTQSVGDTLAAVKGVTATGFATGANTLNTI
Y
2081 PF12260
(PIP49_C)
 click to view
Estimated TM-score=0.63;
easy target.		 >Protein-kinase domain of FAM69 (Length=202)
AWALLQLDEFLLMVILQDKEHTPKLLGFCGDLYVTERVEYTSLYGMSLPWIIELFIPSGFRRSMDQWFTPSWPRKAKIAI
GLLEFVEDIFHGPYGNFLMCDTSAKNLGYNDKYDLKMMDMRKIVPEMNLKEIIKDRQCESDLDCIYGTDCRTLCDQSKMR
CTTEVIQPNLAKACQLLKDYLLRGAPSDIHEELEKQLYLCIA
2082 PF12244
(DUF3606)
 click to view
Estimated TM-score=0.63;
easy target.		 >Protein of unknown function (DUF3606) (Length=54)
DKKKRGAQDRALIALSESYEVAYWSKKFKVTPAKLKAAVKKVGHSAKKVEAHFK
2083 PF12119
(DUF3581)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF3581) (Length=216)
MFLSPYFSKQNQSISVSAQQASDFAKKIAQDFNPIHDVGAKRFCVPGDLLFALVLTQYGLSQNMKFTFAGMVGDGVELQF
PEQVSDSFSICDNREKTYLQVSRQGDVSRCDAQTESFIRNYVAFSGHNFIDILVPLMKQHQVMINPERPLVIYESMSFDL
TSLDFVEVKLSLVQQELKIDGKRGDVTLHFELHSGDTLVGTGIKTLVMSGLRPYEE
2084 PF12094
(DUF3570)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF3570) (Length=422)
ASLAAAACALLNSAVQAQENTQANEWQFDTAILYYGETDRVQLGEGVFNAKKDFGDEHIFNGKIAIDTLTGASASGAVAQ
QGVQTFTRPSGNGQYVVNAGETPLDDTFKDTRVQLSAQWTQPLWENITGSTGVHLSKEYDYLSLGVNGSLARDFNQKNTT
LSAGVSYQYDSIDPVGEAPTGLSPMVVNNGQFSDESAFETAFNATRATDSKDKNTVDLLLGVTQVINRRMLMQFNYSYSI
ADGYLTDPYKLLSVVNTEGVTQDILHENRPDKRTKQSFYWQTKYASDYGIADVSYRYATDDWDIDSHTLDSRFRVKLSDN
SYIQPHFRYYQQSAADFYQPFLIQGSLLPSVASADYRLGEMTAYTIGLKYGQALDNGREWAVRLEYYQQSPKNAGFEEPG
ALQGLDLYPSIDAIIAQVSYSF
2085 PF12031
(BAF250_C)
 click to view
Estimated TM-score=0.63;
easy target.		 >SWI/SNF-like complex subunit BAF250/Osa (Length=256)
SLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLILLHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEV
LRDNTLVTLANISGQLDLSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLI
LATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSIGNLISFLEDGVTMAQYQQSQHNL
MHMQPPPLEPPSVDMM
2086 PF11970
(GPR_Gpa2_C)
 click to view
Estimated TM-score=0.63;
easy target.		 >G protein-coupled glucose receptor regulating Gpa2 C-term (Length=76)
RKRQKIIEKQMKSIFIYPFAYCFVWLFPFILQCTQFNYEQHHKPIYWLNCMGAFMQPFNGFIDTLVFFYREQPWEY
2087 PF11948
(DUF3465)
 click to view
Estimated TM-score=0.63;
easy target.		 >Protein of unknown function (DUF3465) (Length=122)
VLLCFGVSHVQANDARLKQAYQNHQSDVQVRGSGLVSRLLPDDNKGSRHQKFILRLDSGQTLLVAHNIDLAPRIQGLRKG
DRVEFYGEYEWNKKGGVMHWTHKDPRNHHAHGWLKHNGKIYE
2088 PF11946
(DUF3463)
 click to view
Estimated TM-score=0.63;
easy target.		 >Domain of unknown function (DUF3463) (Length=130)
MMVSPGYSYEKAPDQEHFLKRNRTHELFKQILSNGKKSWKFNQSPLFLQFLQGKRKYQCTPWGNPTYNIFGWQKPCYLLQ
DGYVATFKELMQETNWDNYGTGRNEKCADCMVHCGYEASAVDETFSSWRG
2089 PF11883
(DUF3403)
 click to view
Estimated TM-score=0.63;
very hard target.		 >Domain of unknown function (DUF3403) (Length=47)
SEAPSMPKPKIPGFYARTNDPEIDSSSNKQNEIWSVNQVTITMLDAR
2090 PF11804
(DUF3325)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF3325) (Length=100)
LLGFLLCYGGFTALCLSMDRHHGELLGRKPSARRRQGMRIGGWLLLALSLWAAVSAAGWGVGLVQWFAVLMLSALLLVLL
LPYRPRLALALAGVSLLASP
2091 PF11456
(DUF3019)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF3019) (Length=102)
LSLKPRLCVLSEGEEVCRDTIEITWIAQKARSLCLYQDDTDSPLQCWDAAREGRYTIELAASENINFSLREKNEDTFLVT
QAFEVVQESTKYRRRNRNPWSF
2092 PF11449
(ArsP_2)
 click to view
Estimated TM-score=0.63;
hard target.		 >Putative, 10TM heavy-metal exporter (Length=363)
NTREITVTTLSDSFWAVSCYVAATLAIYHYLSNFMSKTNRITQLYHRSRHHQVFFAALLGALPGCGGAIVVTTQFISGRV
GFGAIVAVLTSTMGDAAFLLLAAKPSVGVGVVALGIVVGTVSGLIVNAFHPDDFLRPEPKQASAHHHCCQHQSERHTPLE
QRAINLQGAFWKWLIVPASIVAVLTSFQVDINQLLSLSPSSIEWLGAIFALVSMSLWAMTKELGDYQSTVSEDEKIVDSH
PIQKAAQDTNFVSAWVIVAFLAFELTTYFSGLDLAATFSNWGIWMPLAGLAIGMLPGCGPQILVTSLYITGAAPLSAQIA
NAISNDGDALFPAIAMAPKAALMATVYSSIPAFIVGYGYYFMF
2093 PF11353
(DUF3153)
 click to view
Estimated TM-score=0.63;
easy target.		 >Protein of unknown function (DUF3153) (Length=193)
TNIKIIGPDRIKLSWEISSNSNQLLPWQEKLQEGFRGISPQANISSNKNGKQLFEVPSLSSNDADILLQNIISIAANAAG
FEAPSSSIHLTERNLLIGIDQQLDLNIDLRDFPDIPNLNLAIFLDPASSKNNPKGNPVKPILLDNNLKWELQNGEINKLF
LHRWQWSRLGLGTLLIILIMGFSMILQTLKLKM
2094 PF11335
(DUF3137)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF3137) (Length=135)
TIFKGLFFMADYNKNFSGITRVLPDYKKRWLFAGKDRVMLEDPEFERLFEVYSTDQIEARYILTPSLMDRLKSFKQKTGR
PVYASFVNNKIYVAIEYARNLFEPDIFKTLYDFAPMQQYFEDLQFAISIVEELNL
2095 PF11305
(DUF3107)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF3107) (Length=73)
MEVKIGVQHVNRELVLESEQSPDEVQEQVANALSGKSNLLELTDDKGRKVLVPADRLAYVEIGEPSVRKVGFG
2096 PF11297
(DUF3098)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF3098) (Length=67)
IFGKKNYKFMLIGLAIIILGFILMSGGGSDDPNVWNPDVFSWRRIRLAPTLVLIGFGIEVYAILLNP
2097 PF11196
(DUF2834)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF2834) (Length=98)
IYLLLAIAGAILPWQANLEFMQANGDPLALMQFIQDANANAAARSLSRDLLIGASAITIWIAVEGRRLQMKGWWITLIAC
VMISFACGAPLFLHLRER
2098 PF11184
(DUF2969)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF2969) (Length=76)
MSKKNKDIEVRVEETKKRVNGQEIDVTQLFIGKKMIGEVLTNDAKHFEIFMDNESQGVFKTLDEALESVIRQWNLH
2099 PF11152
(CCB2_CCB4)
 click to view
Estimated TM-score=0.63;
easy target.		 >Cofactor assembly of complex C subunit B, CCB2/CCB4 (Length=194)
LPIVVGGLGAVLLLINRLLTPEITESQARADVLGVILSAVLILTGLIWQQVQPRSPDAVELIGEEGFVLAQDLPQAIKTE
LAWASHLLLTNTVTRSLVVFYQGKVLLRRGILGTKSEVTPGPILKRVQEKQQPVYLVNLKVYPGRIEFDYLPENTQGVIC
QPIGKEGVLILGANAPRSYTKQDENWIAGIADKL
2100 PF11143
(DUF2919)
 click to view
Estimated TM-score=0.63;
hard target.		 >Protein of unknown function (DUF2919) (Length=144)
YAIEQYDTHGFLKAPIWLWLGWLFLARAWIVFVVAGVSRDSGSQILSFVYPGNTALYLGLAAGVPSIALMWLISLRHPER
RWVNALCHIGRWVTLLTAVAQFLQTGYHVYLQHGAFHWTNALTLLILLWLILYVYRSRSVRDCF

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