Home Research COVID-19 Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●QUARK ●LOMETS ●COACH ●COFACTOR ●MetaGO ●MUSTER ●CEthreader ●SEGMER ●FG-MD ●ModRefiner ●REMO ●DEMO ●SPRING ●COTH ●BSpred ●ANGLOR ●BSP-SLIM ●SAXSTER ●ThreaDom ●ThreaDomEx ●EvoDesign ●GPCR-I-TASSER ●BindProf ●BindProfX ●SSIPe ●ResQ ●IonCom ●STRUM ●DAMpred

●TM-score ●TM-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13

[Back to server]

Modeling of Pfam protein domain faimilies by C-I-TASSER (Page 9)

Search by Pfam ID:

Go to page (83 pages in total): [First page] << < 4 5 6 7 8 9 10 11 12 13 14 > >> [Last page] [All entries in one page].

# Pfam ID C-I-TASSER models ranked
by estimated TM-score
(click to view)		 Full name and representative sequence
801 PF13114
(RecO_N_2)
 click to view
Estimated TM-score=0.72;
trivial target.		 >RecO N terminal (Length=71)
MQGYIIHTQKLRDEDLIVDILTKNSLVKTYRFYGARHSNIMLGYKIDFELISNIKFLPQLRSVMHLGFKWL
802 PF13020
(DUF3883)
 click to view
Estimated TM-score=0.72;
easy target.		 >Domain of unknown function (DUF3883) (Length=91)
GEEYVYQQLCRSLGEQEGVQVKWVNETEESGLPYDITVRSGASQDIEYIEVKSTRTMEKGVFEISMNELDTAGMHGSRYS
IYRVFNAGNAA
803 PF12812
(PDZ_1)
 click to view
Estimated TM-score=0.72;
easy target.		 >PDZ-like domain (Length=80)
AITPDKFVSVAGASFHDLSYQQARLYAISLKGAGVYVCEAAGSFRFADGYTSGWLIQEVDNQPTPDLDTFIQVMKKIPDR
804 PF12733
(Cadherin-like)
 click to view
Estimated TM-score=0.72;
trivial target.		 >Cadherin-like beta sandwich domain (Length=91)
SALSASVGALNPSFSPATKTYVINVPTGTTSTTITPTLNDLKATLTVNGAAHTSGATAGPFPLPVGNTSISIKVTAESDT
TISTYTVSIVR
805 PF12679
(ABC2_membrane_2)
 click to view
Estimated TM-score=0.72;
easy target.		 >ABC-2 family transporter protein (Length=303)
WNLALKELYVSVKSRRFIVIVVLYFIIFGLAVYSIKDYLVQMGVPSVDSNELGLWGVSAEIYTTPLAMLFTVNMTIITVL
GAVLGVALGADAINREVESGTVRVLLGHPVYRDEIINGKFLGMGLLIAVTYMVSYIVMIAVMLILGIPLDGESLFRSFLA
ILVTMLYTMVFLSLGILLSTLSKKPETSMLAGVGLAIFLTVFYGIVVGIVAPKLAGPEPPIGTSAYQIWADELHVWMNRL
HSINPAHHYVQLVSYIFAGDRFFNYYIPLSDSLIYGFNNLAALLVMLLLPFALAYARFLTSDL
806 PF12390
(Se-cys_synth_N)
 click to view
Estimated TM-score=0.72;
easy target.		 >Selenocysteine synthase N terminal (Length=40)
LRQLPSVDELLQEPSIREMVQALPRWAVVEAIREVLERWR
807 PF12038
(DUF3524)
 click to view
Estimated TM-score=0.72;
easy target.		 >Domain of unknown function (DUF3524) (Length=166)
VLLIEPFYGGSHKQLMDLLQEELQEDCVLCTLPAKKWHWKARTSALYFMQTVPTSSNYRILFASSVLNLAELAALRPDLG
KLKKVLYFHENQLAYPVQKRQERDFQYGYNQILSCLVADVVVFNSAFNMESFLNSIGKFMKLIPDHRPKDLEKIIRPKCQ
VLYFPV
808 PF11854
(MtrB_PioB)
 click to view
Estimated TM-score=0.72;
easy target.		 >Putative outer membrane beta-barrel porin, MtrB/PioB (Length=635)
YNDSNDIRSANAFAAEDEFAGKLDADVKYVSESGYQASIEADNLGMENGRLDVNAGKAGQYNLNLNYRQIATYKTDQAMS
PYQGAGSDHLTLPDNWQTAGSSQDMTQLYSSLNPLELSLKRKRAGLGFEYQGEELWSTYVNYQREDKTGLKQASGSFFNQ
SMMLAEPVDYTTDTIEAGIKLRGDNWFTALNYSGSSFKNQYSQLTFDNAFNPTFGAQTQGTMALDPDNEAHTVSLMGQVT
AGKTIMSGRVHYGQMTQDQAFVTSGYGYDMPADSLDGRVDMQGVNLKLVSRISSSVRLNASYDYSDRDNKTNVEEWTQIS
IDSTTGQVAYNTPYDITTQRAKLGADYRIARGMRLEAGYDYRQDERSYQDRETTDEHTLWTKFRLNSFDEWDMWIKGSYG
ERDGSEYQASEWTSSESNDLLRKYNLADRKRSMVEARVTHTPIDALTIDFGTRYALDDYNDTQIGLTESKDLSYDINASY
LINDDMMVNAFYSRQNIESEQAGSTNFSTPNWYGVVEDQVDVIGAGFSYNNLMEKKLRLGIDYTYSDSNSNTQVTQGITG
DYGDYYAKAHNVNVYGQYQATEKMALRLDYKMEKYRDNDAGNDIAPDGIWNVVGFGSNSQDYTAHLIMLSMSYKL
809 PF11848
(DUF3368)
 click to view
Estimated TM-score=0.72;
hard target.		 >Domain of unknown function (DUF3368) (Length=46)
VTGTLGVLLRAKNEGLIDSVKPLVDKMIEEGFHVDDKLYNFVLKKA
810 PF11350
(DUF3152)
 click to view
Estimated TM-score=0.72;
easy target.		 >Protein of unknown function (DUF3152) (Length=206)
LPDGGPFTAEGAGTWRVLPGTSPKVGQGTEQVFTYTVEVEDGIDTTGFGGDESFARMVDQTLANPKSWTNDARFAFQRID
AGEPTFRISLTSQMTIREACGYDIQLEVSCYNPGIDRVVLNEPRWVRGAVAFQGDIGSYRQYLINHEVGHAVGYQAHQPC
EADGGLAPVMMQQTFGTSNNDIAKLDPEGVVPMDGKTCRFNPWPYP
811 PF11249
(DUF3047)
 click to view
Estimated TM-score=0.72;
easy target.		 >Protein of unknown function (DUF3047) (Length=197)
DGWEALEFPGIDSHTRYELVTEDGTRVVRAEADASASGLISRLSVDPGDSLILRWRWKVANVYEKGDARTKAGDDYPARI
YVAFEFQPDKAGFFERAKRKTVKVLFGEELPGNALNYIWANTLPVGSVVPNAFTDQTMMIAVNSGADQAGEWVTVERDIV
ADYREAFGEEPPRIVGVAIMTDADNTGESATAWYGDV
812 PF11042
(DUF2750)
 click to view
Estimated TM-score=0.72;
easy target.		 >Protein of unknown function (DUF2750) (Length=101)
NHFVNRVCEQEEIWILTDEHGCMMLTTDDDEDCIPVWPHADYAKDWAVGDWKDCTPEAISLNVWLKRWVPGMTDDELLVA
VFPTADETGVVVEPYELKDAL
813 PF10948
(DUF2635)
 click to view
Estimated TM-score=0.72;
hard target.		 >Protein of unknown function (DUF2635) (Length=44)
KPVTGLTVRDPETMQPLAEKGERKPRTAYWLRRLKDGDVTEVTA
814 PF10794
(DUF2606)
 click to view
Estimated TM-score=0.72;
easy target.		 >Protein of unknown function (DUF2606) (Length=130)
MYSTIFNIGQINKYSKLAIFMSILFLCGCSSQTHSSQKETTIPVTLHVEDAKGLPVEGVQVTIVKAPSSDEEPSTEIGEI
LGKTDKNGDIKWDTGRKGDYSVALTKGETSVTHHISLTEDKKDHAIPLVF
815 PF10790
(DUF2604)
 click to view
Estimated TM-score=0.72;
easy target.		 >Protein of Unknown function (DUF2604) (Length=76)
VVVNGQPTQVEANPNQPLHVVRAKALENTQNVAQPAENWEFKDEAGNLLDVDKKVGDFGFANIVTLFLSLKAGVAG
816 PF10544
(T5orf172)
 click to view
Estimated TM-score=0.72;
hard target.		 >T5orf172 domain (Length=105)
GFIYVFWYPGGFGHVKIGYTKDVEKRMSEWSKQCGRKPEKYFPSGQADLEPVPHRLRVEQLVHAELARYRREEPRCGKCG
GRHVEWFEVDVSLAISVVQKWVNWM
817 PF10363
(RTP1_C1)
 click to view
Estimated TM-score=0.72;
easy target.		 >Required for nuclear transport of RNA pol II C-terminus 1 (Length=104)
KALEDACNELLPVRGHAMIILAKLISQGDSEAKAKKNAILCIFQENIKHEDSYLYLTAIEGLACLATEYPDIVLTTLAEE
CVRSEGNVKLKVGESLMRVIRNLG
818 PF10354
(DUF2431)
 click to view
Estimated TM-score=0.72;
easy target.		 >Domain of unknown function (DUF2431) (Length=169)
LLVGEADFSFAASLAAAFGSSVSNLTATSLEYKRELEKVYSKAVDNIQELKSKGCNVFHAVDATVMASHPSFKNSVFDRI
VFNFPFAVISEEEWGNLHLPAVLEKQHSLVREFLENAKKLISENGEIHITHRKDGIFGAWRIKFLASEQGFQVVEAVDFN
ICDYPGYNP
819 PF10342
(GPI-anchored)
 click to view
Estimated TM-score=0.72;
easy target.		 >Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family (Length=85)
SPLSTTSLEPGKSYTLEWTDNFRDEVKLELYKDNFLQATISSSTPSDGSFSWTVPTSLTSGSNYNIKMTKVNDSSIYDYS
NNFTI
820 PF10326
(7TM_GPCR_Str)
 click to view
Estimated TM-score=0.72;
easy target.		 >Serpentine type 7TM GPCR chemoreceptor Str (Length=306)
HIIQYFGFISSQLANSLLIYLILTKARKLFGMYRFVMLGFAFFFLFYSWIEVLTQPVIHIKSPVCIVFMDSSLKYYKSLG
FVITCLYCACFALVISLLSAQFFYRFLAVCKPHLLSHGEERLLFYLFVPCFLCFVAWFEFVYYGMANTVEKQLYMKNELS
EIYNEDSERVAFIAVMYWSVDQNGQKKWKLCDIALLLACVATIVGGGCFMTIVYCASRIYKKMKDTSCHMSERTMELNRQ
LFITLTIQTILPLFMMYIPVGLATSLPIFEIKTGRIANFTAASLAIYPFLEPLIPMMCIKEFKNVL
821 PF10127
(RlaP)
 click to view
Estimated TM-score=0.72;
easy target.		 >RNA repair pathway DNA polymerase beta family (Length=248)
MKQRIIDELKRIEQSYGVKIVYAVESGSRAWGFPSQDSDYDVRFIYVPKKEWYFSIEQERDVIEEPIHDLLDISGWELRK
TLRLFKKSNPPLLEWLSSDIVYYEAFTTAEQLRKLRTEAFKPEASAYHYINMARRNVKDYLQGQEVKIKKYFYVLRPILA
CQWIEKHGTIPPMDFTVLMNELVAEPELKAEMETLLERKRRGEELDLEARIDVIHQFIETEIERIMEAAKELKAEKKDMT
SELNRLLL
822 PF10030
(DUF2272)
 click to view
Estimated TM-score=0.72;
easy target.		 >Uncharacterized protein conserved in bacteria (DUF2272) (Length=189)
ERLPGLWQRVGEYWWIGQDPYETEVGWTGKTDSQGTRFEIEHDGHYAWSAAFISYVMRVAGANDRFPYSPNHSTYINAAA
SGQSSGVTAHDPGTYAPKIGDLICVGRGRSKTVTFSMLPTSYGFPAHCGIVSATNQNAQPFGHELSIVGGNVDDAVALTH
VPTDANGMIADGSGHSYDNRYPWCAVLEV
823 PF09990
(DUF2231)
 click to view
Estimated TM-score=0.72;
hard target.		 >Predicted membrane protein (DUF2231) (Length=103)
YEVSWWNMLFATISIFIAIIFGQTEAGLAQPYDAVKPILNLHTLIGWSLSAILATITGWRFILRSRDPQKVPVSYLAVSL
VLVGIVCFQVYLGDELVWVYGLH
824 PF09954
(DUF2188)
 click to view
Estimated TM-score=0.72;
easy target.		 >Uncharacterized protein conserved in bacteria (DUF2188) (Length=57)
YHITFNKDDRWQVKKVGALKILKTFKTQKEAISFADKLAKNQKAGVVIHRTSGQIRS
825 PF09938
(DUF2170)
 click to view
Estimated TM-score=0.72;
easy target.		 >Uncharacterized protein conserved in bacteria (DUF2170) (Length=137)
WTAQALHEALAATELFQSGQAGIELIQGADASLHITMREYGDLPLFIAVFGEQIIVEALLWPASDVKDAAAFNEEVLRTH
KLFPLSSIGLEKMGDGRDCYTMFGALSSSSTLSDVVFEIELLADNVIKATEAYEGFL
826 PF09848
(DUF2075)
 click to view
Estimated TM-score=0.72;
easy target.		 >Uncharacterized conserved protein (DUF2075) (Length=363)
MFVVQGDAGTGKSVILNSLFNDVQKLANNNPDTTDILKGTRNYLIVNHPEMLKLYHRMSTNYTYINKASLERPTSLINNL
QKRKEMADVVIIDEAHLLATSKDAFKRFYGENHLKELMELAKVLVLVYDEKQALRMGCYWDENTENGANLQTFYDEIPES
KRGWYNLKQQFRVAAPPDVLDWINDISVEGKIPKYPKSAKGSLEPKFDFQIWDDCNEMYMKLKEKNETFGQCRMLSTYDF
PYRLDGKTYYVTCGDFKLRWDMYAPKALLPWSEREDTIDEVGSVYTVQGFDLNYAGVILGRSVGYDKANDCIKLRPELYD
DHAGFTKKKNISDADTVKQKIIMNSINVLLTRGTKGLYVYAWD
827 PF09559
(Cas6)
 click to view
Estimated TM-score=0.72;
easy target.		 >Cas6 Crispr (Length=195)
VDLNFQVLGNILPADHGYGLYAALTHWNPIIHDLEGLSIQTIAGIPDKQGKIYLTERSRFRIRLPHDQVPLVYGLAGKTL
TIGKHTIRLGIPQIYLLQPASKLRSRLVVIKGYQEPKIFLEAVQRQLEKLRINGIVAISTANSKPDRKTIKIKRFTVVGF
GLEMSNLSDEDSLLLQEVGLGGKRRMGCGVFVPCQ
828 PF08856
(DUF1826)
 click to view
Estimated TM-score=0.72;
easy target.		 >Protein of unknown function (DUF1826) (Length=199)
EELSGLAGIYQDDVNLMVWQRNLDSETAQSVSAVLQTDRPLSLNQIVTPENVNQSLERGLPQVEGRDALIRDIALLVDAY
CCLFDLETVGLRLTQVDRAMCPRFHVDQVPCRLITTFAGPATQWLEENSLNRSKLGRGSNGQPDSSSGLIQANANIQQIT
VGDVALLKGERWEGNEGRGIVHRSPGVEQGQQRLLLTLD
829 PF08480
(Disaggr_assoc)
 click to view
Estimated TM-score=0.72;
easy target.		 >Disaggregatase related (Length=202)
MDDVEIYNNLFHNTYGPGIALVGYNNGGGIYPLTEACNIYIHNNIFYDCASQQTYNWMGGVTACGFDNVVIENNTFDGCY
NVGVFVHQPTVGVSAPGTGYRIYAKNNIIANTRLRAYDPSGTGNGVQNDMPTTHTLTSEYNCFHGNAGSNYKNVTASSTD
LSSDPLFYDQPNRDYHLKSLYGRWNGSSWETDTVHSPCIDAG
830 PF08400
(phage_tail_N)
 click to view
Estimated TM-score=0.72;
easy target.		 >Prophage tail fibre N-terminal (Length=127)
XSGVLKDGAGKPIQNCTIQLKAKRNSTTVLVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEGSRPG
TLNDFLGAMTEDDVMPEALRRFEEMVEEAARNAEAASQSAAAAKKSE
831 PF08386
(Abhydrolase_4)
 click to view
Estimated TM-score=0.72;
trivial target.		 >TAP-like protein (Length=104)
SPTWGPIWSGIRMNCIDWPKFPKTNFRGPFNATTSHPLLVIGNTADPVTPLWAAKKMSAGFTDSVVLTQDSPGHCSLAAP
SVCTQSHIRRYFIDGTLPEPGTVC
832 PF08366
(LLGL)
 click to view
Estimated TM-score=0.72;
trivial target.		 >LLGL2 (Length=100)
SPFGPFPCKSITKIATHSSRRHNEDYLFFIGGMPRAAYSDRNVISVQLGEKQVVFDFTSKVLDFSIFTADRETGCTEPEA
LFVLCEEEFVAIDLLSDDWP
833 PF08348
(PAS_6)
 click to view
Estimated TM-score=0.72;
easy target.		 >YheO-like PAS domain (Length=114)
LKQYIPMVHFIAEIMGENCEVVLHDVTNPDHSIIEIANGHVSGRKINSPITDLALKILKEESYKDQDYICNYKSSSKTNK
TLRSSSYFIKDENNKIIGMICVNMDITDFINARN
834 PF08220
(HTH_DeoR)
 click to view
Estimated TM-score=0.72;
easy target.		 >DeoR-like helix-turn-helix domain (Length=57)
RREQIIQRLRQQGSVQVNDLSALYGVSTVTIRNDLAFLEKQGIAVRAYGGALICDST
835 PF07857
(TMEM144)
 click to view
Estimated TM-score=0.72;
easy target.		 >Transmembrane family, TMEM144 of transporters (Length=355)
VGLAACGVSSVFFGSMFVPIRKFDAADGIFAQWVMATAILLIGFVVFCILGFPGFYPLAMLGGMSWTIGNATAIPIISRL
GMALGMLIWNTTNCLTGWAGGRFGLFGMKAHPPASSILNYGGLVCVIIGGILFSRIRSESAPEKEKDPKIRMASVESKAN
GTVEKSLLSSEEGSTEPDEDSVSDRDRAVKKAGVQRILLVYLCGFVAALIAGVFYGMTFVPVIYMMDNPDLFVGYPDDGL
AYVFSHFFGIFLTATVIFIGYAAVKRNRPIVPSFIFLPSLASGMLWGIAQSSFFIANQHLSQAVTFPIISMLPGCVASAW
SIFYFHEIRGKRNFTILAVAMAVTITGAIMVGLSK
836 PF07802
(GCK)
 click to view
Estimated TM-score=0.72;
easy target.		 >GCK domain (Length=72)
GECGFCLFMKGGGCKDTFINWEDCVKEAEDKNEDLVEKCAEVTAKLKQCMDEHSDYYEPILRAEKHAEEQVT
837 PF07608
(DUF1571)
 click to view
Estimated TM-score=0.72;
easy target.		 >Protein of unknown function (DUF1571) (Length=230)
YPGHRAQFKRLERIHGQLGPWQTIELKVLHNPLSVYMKFLEPDDGKEVLYSQGRFDNHLIAHPGGMARLLTPRLKLDPNG
PLAMAENRHPITSAGLLNLVRRLIHFRRLDLNHPTSHLRLDRIETPDGQMVFRSCHRHLKRTDQHPYSRSEIWYDSATCL
PIRVENHDWPAGIILGHTISSPADLGDPFAIFDAPDNGETLVEIYEYAHLDFETPLTPLDFDPANPAYGF
838 PF07344
(Amastin)
 click to view
Estimated TM-score=0.72;
easy target.		 >Amastin surface glycoprotein (Length=158)
FVAFMFVLVATPIDMFRIRSRDSQVLPDRCYTLWGLKTNCDSFSYQFLSDDLWESCPPRRDRFRVAQAFAVMSIFVYLAA
VVLGVIMLFCCRYLRWVCLALNCFGAVTVCIVWACMAVTYNRNEGLNCLPLKRTHIYGAGFVLLVLAWLLDILNIPVL
839 PF07223
(DUF1421)
 click to view
Estimated TM-score=0.72;
easy target.		 >UBA-like domain (DUF1421) (Length=45)
YNELIEKLVSMGYRGDHVVNVIQSLEESGQPVDFNAILDRLNGHS
840 PF06450
(NhaB)
 click to view
Estimated TM-score=0.72;
easy target.		 >Bacterial Na+/H+ antiporter B (NhaB) (Length=520)
MPMTMSQAFIGNFLGNSPKWYKIAILSFLIINPILFFYVSPFVAGWVLVLEFIFTLAMALKCYPLQPGGLLAIEAVAIGM
TSASQVLHEIEANLEVLLLLVFMVAGIYFMKQLLLFAFTKMITKVRSKILVSLLFCLASAFLSAFLDALTVIAVIITVAV
GFYSIYHKVASGKDFSADHDHTSENKNEEGEDQLNEAELESFRGFLRNLLMHAGVGTALGGVCTMVGEPQNLIIAAQANW
QFGEFAIRMSPVTVPVFIAGILTCYIVEKFRIFGYGAQLPDAVHKILCDYDAHEDARRTNKDKMKLIVQAFIGVWLIAGL
ALHLASVGLIGLSVIILATAFNGITDEHALGKAFEEALPFTALLAVFFSVVAVIIDQQLFAPVIQWALNHEGNTQLVIFY
IANGLLSMVSDNVFVGTVYINEVKAALLNGQITRDQFDLLAVAINTGTNLPSVATPNGQAAFLFLLTSALAPLIRLSYGR
MVWMALPYTIVLSIVGVMAIQIGFLEQMTQYFYDSHAILH
841 PF06381
(DUF1073)
 click to view
Estimated TM-score=0.72;
easy target.		 >Protein of unknown function (DUF1073) (Length=355)
QLEWMYRGSWLVGKAVDVVAEDMTRAGIDLNGTSNPDDIETLHRAINRLQIWQSINDTLKWARLYGGAIAVMLIDGQDVS
TPLRIETVTKDQFKGLLVLDRWMVQPSLERPVKEYGPYLGKPEFYTINQNAPALINKEVHHSRVIRIEGYELPFWQQQTE
NGWGLSVVERLYDRLVAFDSTTQGAAQLVYKAHLRTYKVAGLRKIISAGGAVMDALVKQMELIRKYQSNEGLTLMDAEDQ
FETHQYAFSGLADITLQFGQQLSGAIDIPLVRLFGQSPSGMNATGESDLRNYYDSINAQQERRLRLPMTTLLDVLYRSVL
GSAPPSSFSFRFNPLWQMSEKERADIANVIATAVA
842 PF06258
(Mito_fiss_Elm1)
 click to view
Estimated TM-score=0.72;
easy target.		 >Mitochondrial fission ELM1 (Length=321)
PGSENQSLGLVRALGLSDNHILYRVTRPRGGINEWLHWLPVSFHKKDGPLLVVASGRDTISIASSIKRLASQNVFVVQIQ
HPRSNLNRFDLVITPHHDYYPLTPHAQEQVPRFLRKWITPHEPPDRHVVLTVGALHQIDSAALRSAASAWHDEFAPLPKP
LLVVNIGGPTRHCRYGADLAKQLTTYLFSVLESCGSVRISFSDTTPEKVSNIVAKELGNNPKVYIWDGEEPNPQMGHLAW
ADAFVVTADSISLISEACSTGKPVYVMGAERCRWKLSEFHKSLSERGVVRPFTGSEDISESWSYPPLNDTAQAARRVHEA
L
843 PF06239
(ECSIT)
 click to view
Estimated TM-score=0.72;
easy target.		 >Evolutionarily conserved signalling intermediate in Toll pathway (Length=218)
KSKLSLVPRPPESQRRPVKALELHEELFRQAPAGERDKASFVRTVQNFEQHNVHKRGHVDFIYLALRKMREYGVERDLAI
YNRLLDVFPKEVFRPRNVIQRIFIHYPRQQECGIAVLEQMENHGVIPNKETEFLLIQIFGRKSYPMLKYLRMKLWLPRFK
NISPFPVPQELPQDPVDLAKLGLRHMEPDLSARVTIYQMPLPRDSLGAADPTQPHIVG
844 PF06115
(DUF956)
 click to view
Estimated TM-score=0.72;
easy target.		 >Domain of unknown function (DUF956) (Length=116)
MVQSLNTKVDLTIKGTSYMGMSDYGQIMVGDNAFEFYNDRDANKFIQIPWEEVDYVVASVMFKGKWIPRYAIQTKRNGTY
SFASKEPKKVLRAIREYVDPDRMVQSLSFFDVVKRG
845 PF05525
(Branch_AA_trans)
 click to view
Estimated TM-score=0.72;
easy target.		 >Branched-chain amino acid transport protein (Length=427)
SYIIIIGLMLFALFFGAGNLIFPPMLGQLAGKNVWIANAGFLVTGVGLPLLAITAFVFSGKQNLQSLASRVHPVFGIVFT
TILYLAIGPFFAIPRSGNVSFEIGVKPFLSNDASPVSLIIFTILFFALACLLSLNPSKIIDIVGKFLTPIKLTFIGLLVV
VALIRPIGTIQAPSKGYTSQAFFKGFQEGYLTLDALVAFVFGIIIVNALKEQGASTKKQLMGVCAKAAAIAAVLLAVMYT
ALSYMGASSVEELGILENGAEVLAKVSSYYFGSYGSILLGLMITVACLTTSVGLITACSSFFHELFPNISYKKIAVVLSV
FSTLVANIGLTQLIKVSMPVLLTMYPIAISLIFLTFLHSVFKGKTEVYQGSLLFAFIISLFDGLKEAGIKIEVVNRIFTQ
ILPMYNIGLGWLIPAIAGGICGYILSI
846 PF05506
(DUF756)
 click to view
Estimated TM-score=0.72;
easy target.		 >Domain of unknown function (DUF756) (Length=83)
PEVRVCYDIANGNVYLQMRNDGKAPCKFTVRAKAYRDDGPWNATVNGGAQAEQHWELAASGQWYDFAVTCDSDPAFYRRF
AGR
847 PF05428
(CRF-BP)
 click to view
Estimated TM-score=0.72;
easy target.		 >Corticotropin-releasing factor binding protein (CRF-BP) (Length=307)
MAPTFKLQCHFILICLMALRGESRYLELREAVDHDPFLLFSANLKRELAGEQLYRRALRCLDMLSLQGQFTFTADRPQLH
CAAFFIAEPEEFITIHYDRVSIDCQSGDFLKVFDGWILKGEKFPSSQDHPLPTSERYIDFCESGLSRRSIRSSQNVAMIF
FRVHEPGNGFTLTIQTDPNLFPCNVISQTPNGRFTLVVPHQHRNCSFSIIYPVVIKISDLTLGHLNGLQLKKSSASCGGI
GDFVELLGGTGLDPSKMMPLADLCYPFHGPAQMKIGCDNTVVRMVSSGKHINRVTFEYRQLEPYELE
848 PF05275
(CopB)
 click to view
Estimated TM-score=0.72;
easy target.		 >Copper resistance protein B precursor (CopB) (Length=207)
AMIFADRLEYQSNEGDSVLLWDAQGWVGGDINKLWIKTEGEYLSNEGGFEEAEVQALYSRAISPYFDLQLGYRYDIEPDP
ERHFAVFGVQGLAPYWFEVDAAAFMSDDGDVSARLEAEYELFLTQKLILQPRAELDFAVQDVPELGIGSGLSTAEAGLRL
RYEFRREFAPYIGVSWRRAFGETADFARADGEDVEAVSFVAGIRLWF
849 PF04796
(RepA_C)
 click to view
Estimated TM-score=0.72;
easy target.		 >Plasmid encoded RepA protein (Length=157)
VPYGSRARMILLYLQTRALQTDSREVELGRSMHDWLDRMGLSVGGQTYRDIREQASRIAACNLTFAWEDANSLGFEKDSI
VKGGIHFSSEHNSPQGTLWEDRVLLSEAFFRELKAHPVPIWEPALRHIQNNSTSIDIYIWLAYRLHSLNKSTTITWP
850 PF04407
(DUF531)
 click to view
Estimated TM-score=0.72;
easy target.		 >Protein of unknown function (DUF531) (Length=169)
MLTMGIINTYDKIKVLDAHYRAIARAAPICHAFGFRLALYDFPFSMTAEELVEYVTDKTTIGESGKYLRLLHEKGHFFVF
DLPKKGFQPQFGTAVVTTSKPEKKRAINPEEIASGILRKSSYLLLVGLGRKGLPKEMFEQAPLHLDITSAGISLETCTAI
GCIPAYIMG
851 PF04319
(NifZ)
 click to view
Estimated TM-score=0.72;
easy target.		 >NifZ domain (Length=71)
PRFRIGERVISRSSIRNDGTYTGKDMGELLVSKGDVGYVTGIDTFLQRFYIYAVHFVESDHRVGMRAKELC
852 PF04311
(DUF459)
 click to view
Estimated TM-score=0.72;
easy target.		 >Protein of unknown function (DUF459) (Length=322)
RHKSVKNIYLAFVDPLMHTAEQWGIDTVFPLLRESFLHATGLIQHPEWEDTFYHCEQRSYEPAAALAESVPSPVLQEAVA
VSPPGVAVNDSVAERKTTAPARVFSRTALRILMCGDSQMRYLTGGALQVLGTSSHVQIQEVTVSSSGFVRTDYYHWPRKF
LALLDTHTQQEPYAAVIMAFGMNDYQNFYDADGSLCVTKTARWERAYEQKMRACLNIILHTVPKVYLLGMPETRNKQLNE
KLVYIEHVQKKVVAQYDPQRVRYYSLKPIVPGVHGTYASAIRDTHGRWVHVMHKDGIHYTIEGGAYVMETLLPLILADLE
RS
853 PF04165
(DUF401)
 click to view
Estimated TM-score=0.72;
trivial target.		 >Protein of unknown function (DUF401) (Length=389)
ASSSLALLFSIAVVLILIRKVNIGLAIFVGSAILAYLTLGADGLLVMLKSLANPQTIEIVVIVILAFTLGYSMEYFGMLE
KVTGGLSESFGVYSFLLIPLLIGLLPMPGGALISAVMLGPLTKMYRISPEKATLLNYWFRHVWVTFWPLYPSVIIGAAVV
NVDYFHFAAATFPIGVFALTAGLTLTRGMERRFRVSRNLFDSLINLYPIAILLILSVLLRLDLLLALVVAIAAVSIHNRA
KLEDFREIFRRTVDKKIILLVFAVMVYKSVIQNSGAAESLFTDISLGFPAPAAAFLLTLLVGFATGIEMSYSSIALPLLT
SFTGSGIVVAKNLMLVIAAGYIGVMLSPMHLCYILTAEYFGTEIGKTYRQLLAIAGITAALVWIAYLVI
854 PF03741
(TerC)
 click to view
Estimated TM-score=0.72;
hard target.		 >Integral membrane protein TerC family (Length=172)
SLIVLEGLLSADNALVLAIMVKHLPKEQQKKALFYGILGAYLFRFIAIGVGTYLIKIWWIKAAGALYLLWMAIQFFMKKN
KEEDEAAVPETPHGFWRTVLAVEIMDIAFSIDSVLAAFGVSDQVWVLYLGGIFGVMMMRGVAQIFLTLIERYPELETTAY
IIIGIIGAKMMA
855 PF03217
(SlpA)
 click to view
Estimated TM-score=0.72;
hard target.		 >Surface later protein A domain (Length=52)
KIMSKSYVYTSAGKRTGAYKSAYTYVYVIGGIVKIGSNNYYKIGTNQYIKVN
856 PF02035
(Coagulin)
 click to view
Estimated TM-score=0.72;
trivial target.		 >Coagulin (Length=173)
PNVPTCLCEEPTLLGRKVIVSQETKDKIEEAVQAITDKDEISGRGFSIFGGHPAFKECGKYECRTVTSEDSRCYNFFPFH
HFPSECPVSVSACEPTFGYTTSNELRIIVQAPKAGFRQCVWQHKCRAYGSNFCQRTGRCTQQRSVVRLVTYDLEKGVFFC
ENVRTCCGCPCRS
857 PF02030
(Lipoprotein_8)
 click to view
Estimated TM-score=0.72;
easy target.		 >Hypothetical lipoprotein (MG045 family) (Length=484)
MKKQLKYWFSLMGLTMSVGLTACSSNQFVFANFESYVSPLLLERAEAKQPMTFLTYPTNEKLINGFANNTYTVAVASSYA
VSELQQQGHLLPIDWAKFNLKKTQNGSNQATIQNKEDAKELFTKEIGDISGELLNWGVPYFLQDLVFVYRGEKIQELEGQ
DVTWSTIIKAIVNHKDRFNNNRLALIDDARTIFSLANVVHHEVKNTTVDVNPTGSTLNYFGNVYESFANLGLKRDNLNTL
FVNSDSNIIINELANGRRQGGIVYNGDAVYAALGGDLRDEINENNLPNGDNFHIVQPKHSPVALDFLIINQQQTHFRDAA
HQLIYQLALEGADQTAEELLKTDEEKGTSDEDYYTYGAMQNFSYVNYVSPLKNISDETTGIVFKENKQADTKQVVKQQSQ
SEQQSESAEKEETEQDDFYTATLKSLLKADSLDDKAKKLVDTIKKTYKIKKADNINWANLIEKPITPLQRSNLTLSWLDF
KQRF
858 PF01925
(TauE)
 click to view
Estimated TM-score=0.72;
easy target.		 >Sulfite exporter TauE/SafE (Length=235)
AMVGVLSGLMSGLFGIGGGTIIVPALVWLGLTQRHAVATSLAAIIPTAIAGVISYAQSGHVDWIAALLLACGTIVGAQLG
SWLLSRLPEMVLRWAFAAFLVFVIVSQIVGTPSRDGTIHMTFLTGALLMLLGIFVGTLSGLLGIGGGAIVVPALSLAFGA
SDLVARGTSLLMMIPNAIAGSVANVRRGLVNLRDGLIIGVVAACLTPVGAWIAGSISARLGANLFAVYLCVIGVR
859 PF01827
(FTH)
 click to view
Estimated TM-score=0.72;
easy target.		 >FTH domain (Length=133)
LEDTRAATGTKSLLKKKSLTLRNLMAPDVFSILPYFDSNCMENIHLTGEYEEAQPLNGIVELPLWNHLKNVTLDHFFIGN
IPQNITHLETFTGNVREITAEDVIQIKNMMLRSGQLKCCYMSSNWNQDESFQQ
860 PF01697
(Glyco_transf_92)
 click to view
Estimated TM-score=0.72;
easy target.		 >Glycosyltransferase family 92 (Length=242)
KGITLCLQPVYYYSQWQNIVLYIEAWIAQGATRFIVFYHSSTKDTRKVLDYYQNLGLLEIRSWPNFGDLPIKAADKYPKI
DESAFIFSYFLAMNICVLDIKTSVGSIADFDEIMVPRNGTTLEYALKEMVDTDVGALSFENNYVAMEPSIYSSDFSGVSK
PIFFERGGPRKYIFNASVIDLCQVHWVRSFIDQSKKSKNADGALMHLRFNAKDFKEKRVSKPFQFFPSNTSQHIQNMKTT
IR
861 PF01050
(MannoseP_isomer)
 click to view
Estimated TM-score=0.72;
easy target.		 >Mannose-6-phosphate isomerase (Length=151)
VGIDNLVIVDTKDALLVATKDKVQDVKKIVEQLKAEGRTEFKNHREVYRPWGKYDSIDNGSRYQVKRITVKPGEKLSIQM
HHHRAEHWIVVSGTAKVTNGDNTFLVTENESTYIPIGVVHALENPGQLPLEIIEVQSGSYLGEDDIVRFED
862 PF18855
(baeRF_family11)
 click to view
Estimated TM-score=0.71;
easy target.		 >Bacterial archaeo-eukaryotic release factor family 11 (Length=138)
QTAFVLALSQNAARLVEIVPDTAAETIKVPDLPTDAASHVGKSSIKDRAPSRRLQGSEGQKVRLRQYARGVDQALRPLLT
GSGIPLILATTQPLDGIYRSVNSYPGLAPRSIEGNPEELSDQQLAEAARPILDEIYAE
863 PF18761
(Heliorhodopsin)
 click to view
Estimated TM-score=0.71;
easy target.		 >Heliorhodopsin (Length=244)
LRRFNLIMGFLHLIQGVLMIVLSNDTTYPIFTNYLTFNPESLSLVPDPKLFYELRFGPAVAAFLLLSAIAHFSLASFGYN
WYVKNLKKGMNPVRFYEYALSSSLMIVLIGMLVGMWDLGALILIFGINAMMNLFGIMMEYHNQYTEKTNWTSFIYGSIAG
IIPWIVIVLYFLGSINSSDAKPPAFVYAIIPTIFVFFNIFAVNMYLQYKKVGKWADYLYGERVYIILSLVAKTLLAWQIF
AGTL
864 PF18742
(DpnII-MboI)
 click to view
Estimated TM-score=0.71;
easy target.		 >REase_DpnII-MboI (Length=147)
IIENICYKFHSVARQLQSRHSDRSTLEIEDEYDVQDLLHALLKLHFDDIREEEYTPSYAGSSSRVDFLLKDENIIIEVKK
TRKNLKAKEVGEQLIIDKAHYTAHPNCKSLICFVYDPDARISNPNGLEKDLERNNNDLNVKVIIAPK
865 PF18481
(DUF5616)
 click to view
Estimated TM-score=0.71;
easy target.		 >Domain of unknown function (DUF5616) (Length=138)
NQLVGREIMIDGFNLLIVLESALSGAYLFKGMDNCYRDLSGVHGSYKRVQQTEKALLLIGDFLKECAVGKVTWVFDKPVS
NSGRLKTRVRELAEAHGFNWEVILDNNPDKLLAESNKIAISSDAWILDRAKRWFNLAG
866 PF18208
(NES_C_h)
 click to view
Estimated TM-score=0.71;
easy target.		 >Nicking enzyme C-terminal middle helical domain (Length=109)
HYSFDEKRMVSQLSKELKTFVSLENLDEKQRMLFNWKNSTMIKQAIGQDMTKQLITINQQENSLAEANQLLDKVVNRTVR
KLYPDIDFERVTMAEKRELIKETDSEQKV
867 PF17312
(Helveticin_J)
 click to view
Estimated TM-score=0.71;
easy target.		 >Bacteriocin helveticin-J (Length=312)
LMYELENLHHVVVQATNLVNNQIFALQLLHKQTDIIVYQAEANRKHIFFDEDNPIVYLSGMAGGHTQTWVYSGKPGNYFI
GTKPKKHGHILWDTQIARVNINGGSVQYDSNTEMPRLSYLNRAGSGFGDGSVAYPGKELERLEAAISPDYKRLLIASIDL
NHVGHFALYDLNEVNEALDNAEASASDVNIQNLHCLVAFTIPSFNQTISSIQGYDIDQDNNVYVSCQLGPKANFLGMAKE
GHPRQIVKIPWGSSNPDEWEVANLDHDHTVDTLGYVTEFESVQVVSPNEIYLTVAYHRKNDLKTLKNRVYKI
868 PF17194
(AbiEi_3_N)
 click to view
Estimated TM-score=0.71;
easy target.		 >Transcriptional regulator, AbiEi antitoxin N-terminal domain (Length=92)
EQKIKKLLDQYKPGTVCLASWLEELGISYDLQKRYRRSGWLSSIGTGAFVRPGDEVTWQGGLYALQTQANLPIHAGAITA
LAMQDMSHYLRL
869 PF17161
(DUF5123)
 click to view
Estimated TM-score=0.71;
easy target.		 >Domain of unknown function (DUF5123) (Length=118)
VIANNTFANITGGNSNGFARVRAVVAGGITISNNLFLNMMSSNYPFVHSNTTSENTVNLSNNFFYNFHEEWFSDMDEATA
TANGGAVLTASPVADIDGGDFTLTNAVLMAKKAGDPRW
870 PF17008
(DUF5088)
 click to view
Estimated TM-score=0.71;
easy target.		 >Domain of unknown function (DUF5088) (Length=198)
GQVILKSRLFTFSSGGSLPLFFSFILLTSAGLVKVYVWKLAVRKFFCIKEGDYIFIRGFKIKRRPGALLIADRTNTDSDT
KYASIPEISVNLTEPTGHIMEMEMLHGLPKVPYDPEFTTVIGIVEYVSSLFRYREGKARMKFREYVYLKVSGIIIKLLAN
DTESIIDIKTGTSIEVRHLRKGTIGPFEFYISSLYTQF
871 PF16460
(Phage_TTP_11)
 click to view
Estimated TM-score=0.71;
easy target.		 >Phage tail tube, TTP, lambda-like (Length=137)
VLEIEGVTSFNPGGNPADQIEDPCLSDTSRKYKKGLRTPGQATLGINADPRLASHVRLFQLSEKDGETSVKWAIGWSDGI
DVKPTVSTEGDDFVLPPARTWFTFEGYVSDFPFDFASNTLVATQATIQRSGAGKWTP
872 PF16288
(DUF4934)
 click to view
Estimated TM-score=0.71;
trivial target.		 >Domain of unknown function (DUF4934) (Length=102)
LKVSDLGKTIRYIPLETTDSCLIGDFPNIKLLDDKIMVYNGKQCLLFDKETGKFICSVGHRGDDPEAYSSTCGYLNPQNQ
LLYFNRDPNQLVKYNQKGNFAG
873 PF16261
(DUF4915)
 click to view
Estimated TM-score=0.71;
easy target.		 >Domain of unknown function (DUF4915) (Length=319)
RQFISWLSEQRISLAFTTYQTGKLFLIGVASDRRLSVFERTFERCMGLWASPDRLYTSSLYQVWRFENALESGQLYNGGY
DRLYVPQVGYTTGDIDIHDIHVDSQGRVIFVNTLFSCLATISDRYSFIPLWQPSFISRLAAEDRCHLNGLAMENGQPRYV
TAVSQSDVSDGWRDRRRNGGCVIDVPSNEIVVSGLSMPHSPRVYRDRVWVLNSGTGYFGTVDINAGKFNPIAFCPGYLRG
LALWGDYAVVGLSKMRGNKTFSGLPLDENLAAKDVEPRCGLQVIDLRSGDIVHWLRIEGMVEELYDVAVIPGVRQPMAL
874 PF16065
(DUF4807)
 click to view
Estimated TM-score=0.71;
easy target.		 >Domain of unknown function (DUF4807) (Length=120)
IDYEWNDRMNYLIWTRVEIENAFSWLSTLGGAYSALGDYFDHCAEEAGRISLRQYKLSRLLGDDGLAARSKLYSSIAYAQ
RGKLKLARYIVRDIAAFARQTHDRRLNRMCQGVWAKLKYL
875 PF16030
(GD_N)
 click to view
Estimated TM-score=0.71;
easy target.		 >Serine protease gd N-terminus (Length=113)
SPCPAVFSYDERDDSYDTWFGTIRLKSNVPLYGIFVDIIFSSPVLSFGTFLRQYNTDDNVHFHIMDKSYRVRAGEVVIIK
FFVRYAPDQPVPLLRQIRFNGQNICTETRQNPV
876 PF15976
(CooC_C)
 click to view
Estimated TM-score=0.71;
easy target.		 >CS1-pili formation C-terminal (Length=93)
LYPGNVAVIEPEVKQMVTVSGRIRAEDGTLLANARINNHIGRTRTDENGEFVMDVDKKYPTIDFSYGGNKTCEVALELSQ
ARGAVWVGDVVCS
877 PF15405
(PH_5)
 click to view
Estimated TM-score=0.71;
trivial target.		 >Pleckstrin homology domain (Length=128)
IVFKSQLRKTPHDSSPANEITSYLFDHAVLLVRVKQAGKAEEIKAYRRPIPLELLAIREMDEVIPQQGVKRTSSSLLPLG
GNNAKDGKKSEGWPITFRHLGKAGYELTLYAANQAGRDKWLQFIDKAQ
878 PF14966
(DNA_repr_REX1B)
 click to view
Estimated TM-score=0.71;
trivial target.		 >DNA repair REX1-B (Length=97)
LVQRFYALHAERVEAYRLFEEGHEAYLRTAPHYDFQRYRQLVHEITLAFSGISKELIEMKERLHEECERPDLSEHIEKLQ
EKERHKLELTAKLQLAK
879 PF14900
(DUF4493)
 click to view
Estimated TM-score=0.71;
easy target.		 >Domain of unknown function (DUF4493) (Length=223)
ETGNISLSLTASTGFSANTRSVNEADYKNVNQYTIQILNSAGVEKVNYLYDDLPSKIKLENGSYTLKAFYGEDKDASRNG
FYVEGSSTFTVQGADQTLNVDCAPVCGKVAVNFDESMDKYFSDYSVVYETSALTAANTTATWVKADTEPWYLKLNKDGET
VKATIHVTRTSDGKSITTEKTYNLERNKSWTLNIAPKDDNGSMTITISIDESTEDHEIDIVVP
880 PF14891
(Peptidase_M91)
 click to view
Estimated TM-score=0.71;
easy target.		 >Effector protein (Length=172)
AQFIKIEGSDEFRERVLADLDMYRASPTGQQMLANLEDKRDPNFLFGENTLTIKELNEENGYASRGHKFVNSDSVIQYNP
AFTFDSERGRPSVVLYHELGHVYDYWNDTFDGDTIAGGPDDGIKKAERQATGLPFDHDDDPSTPDRLDPDHPIQYTENGL
RREMGMRERDTY
881 PF14500
(MMS19_N)
 click to view
Estimated TM-score=0.71;
easy target.		 >Dos2-interacting transcription regulator of RNA-Pol-II (Length=261)
VQVLGEFLTNEDGTIRAKGTGLLSTVLADCPQEQVNNAAINVLVDFYCERLSDTASVPELLQGIESLAHFNSFHNENSLK
VAKSIFASVNVQSFQQTTRHYVFQIFDRLLKHHLNALKQMRQDFVTGFIQAMDGEKDPRNLLLAFSLIKLIIHEFDISQH
VELLFEVTFCYFPITFKPPPDDPYGITADDLKIALRECLSATPYFAELAMPLLLEKLTSSSGNAKKDSMETLTACAPVYG
AKSIVPYLEDLWDYLKDEIVN
882 PF14452
(Multi_ubiq)
 click to view
Estimated TM-score=0.71;
hard target.		 >Multiubiquitin (Length=63)
LNFLSRQVSDPVPLGRQLLEAAALDPQDGYSLFAVLPSGDFEDVRLDEPFDLREHGTERFVTF
883 PF14387
(DUF4418)
 click to view
Estimated TM-score=0.71;
hard target.		 >Domain of unknown function (DUF4418) (Length=117)
FIILGLLIAVGPQSIFAVCGPMEDGKFMKCHWTAQAELGIGLAIVFLAAGILFFKSEQIRAGLSIAAFALSIVSVLVPTK
LIGVCGGEHMQCHSLTKPVLIILGIAGAVFALANTFF
884 PF14373
(Imm_superinfect)
 click to view
Estimated TM-score=0.71;
hard target.		 >Superinfection immunity protein (Length=42)
LYFLPMMIAFKRHHENYTAIFMLNLLLGWTGIVWVVCLIWAF
885 PF14289
(DUF4369)
 click to view
Estimated TM-score=0.71;
hard target.		 >Domain of unknown function (DUF4369) (Length=84)
FTIKGYVAGEKETKKVYLRYGQQFDSTLMKDGRFEFSGYVSDPLRATIWCNRNNSIDFYLDPADVQLSSMNSLSGAVVNG
GPTE
886 PF14109
(GldH_lipo)
 click to view
Estimated TM-score=0.71;
hard target.		 >GldH lipoprotein (Length=136)
RVYDEYQSVPERGWDKDSMITFKVEKIDTLKPYNLFINLRNNNNYNYNNIFLITEMNFPNGKVISDTLEYEMAYPNGDWM
GQGFGDVYESKLWYKENVRFPETGTYQFKIRQAMRKNGNVNGISELQGITDVGFRI
887 PF13711
(DUF4160)
 click to view
Estimated TM-score=0.71;
hard target.		 >Domain of unknown function (DUF4160) (Length=63)
GIIIYMYFNEHNPPHFHAEYNEYKASISIKTLGLMEGKLPSKVMSLVVEWAQEHQDELLENWN
888 PF13613
(HTH_Tnp_4)
 click to view
Estimated TM-score=0.71;
trivial target.		 >Helix-turn-helix of DDE superfamily endonuclease (Length=51)
LTKFQEFCMVLVKLRLSVPHLDLAYRLKISTSSVSRILVTWITVMDIRLTP
889 PF13446
(RPT)
 click to view
Estimated TM-score=0.71;
trivial target.		 >A repeated domain in UCH-protein (Length=59)
TVEQALVFLGVDEQTSDDFIITMYTAKISDSPSSKDLARRAVELIAEARKSDTLKHFLK
890 PF13376
(OmdA)
 click to view
Estimated TM-score=0.71;
hard target.		 >Bacteriocin-protection, YdeI or OmpD-Associated (Length=59)
PRVPTDLGKALAATPTAKVQWNDLTPIARRDFITWIDSAKQPETRRRRIERACSMLAAG
891 PF13335
(Mg_chelatase_C)
 click to view
Estimated TM-score=0.71;
easy target.		 >Magnesium chelatase, subunit ChlI C-terminal (Length=97)
EKSSAVRERVIAARKIQEERFKDSQGVFTNAQMNSKLLRKHCQIDEAGNELLKNAMEKLGLSARAYDRILKVSRTIADLA
GHENINNEHLSEAIQYR
892 PF13100
(OstA_2)
 click to view
Estimated TM-score=0.71;
easy target.		 >OstA-like protein (Length=158)
SKVYLLHSDVLKKSPLNPDPDAQILIGNVAFRHDSIYMYCDSACFYEKTNSLEAFDNVKMVQGDTLFLYGDYLFYDGNTQ
IAQVRYNVRMENKNTTLLTDSLNYDRIYNLGYYFEGGTLMDEENVLTSEWGEYSPATKISVFNYDVKLVNPKFTLTSD
893 PF13058
(DUF3920)
 click to view
Estimated TM-score=0.71;
easy target.		 >Protein of unknown function (DUF3920) (Length=126)
VLDSEFPWDIQRVKNDIFSLIEKREIPVIFCDTCDTNNVLVNLGEEEEEFLFPLSGFYHKERQMIFVCMWEQYEQVLKTL
LHEFRHSMQHEKNVLYIGKEAYEARWIEKDARAFAERKMNEYIRRN
894 PF13005
(zf-IS66)
 click to view
Estimated TM-score=0.71;
easy target.		 >zinc-finger binding domain of transposase IS66 (Length=46)
PTACHCCGGHRLRRLGEDITETLEVVPRQWKVIQHVREKFPCRDCE
895 PF12953
(DUF3842)
 click to view
Estimated TM-score=0.71;
easy target.		 >Domain of unknown function (DUF3842) (Length=129)
RIAVVDGQGGGIGKAIVEKFRKEFEDTIEIIALGTNSLATSLMLKAGANEGATGENAICYNVSKVDLILGPIGIVCANSL
LGELTPQMAKAISESPAKKVLIPLNRCNVIVAGVENKPLPHYIDDAIQI
896 PF12852
(Cupin_6)
 click to view
Estimated TM-score=0.71;
easy target.		 >Cupin (Length=190)
DVLAGLLDGPRARGAFLLRSILNPPWSLRIQDRAPLTLVAMMRGQAWVIPDHGETVRLRPGDVAIMRGPDPYTVADDPAT
PPQVVIHPGQHCTTPEGESLAQEMDLGVRTWGNGPDGSTVMITGTYQMHGEISRRLLAALPALLVLPEDAWDCPLIPLLG
AEIVKDEPGQEAVLDRLLDLLLIAVLRAWF
897 PF12637
(TSCPD)
 click to view
Estimated TM-score=0.71;
easy target.		 >TSCPD domain (Length=74)
YKTKGVCSQQIHFEIEDNKIHNVSFVGGCNGNLQGISHLVEGMDVDEAISRLEGIQCGFKTTSCPDQLAKALKE
898 PF12388
(Peptidase_M57)
 click to view
Estimated TM-score=0.71;
easy target.		 >Dual-action HEIGH metallo-peptidase (Length=206)
VYVGRDAHVTLEASREMLQPATKETQEQYRTTNLVGTSITKICVNPTSGFNSYSRLSQGLDLAIQNYNQRGLSFTMARGP
TTGCSANITATTMSGTGGSAGFPSGGRPYGTINIGTGLQSYSVDVNEHVITHELGHAIGFRHTDYYNRNISCGSGGNEGT
AGVGAIHIPGTPTTATVGGSIMNSCFRSTETGEFTSSDITALNYLY
899 PF12385
(Peptidase_C70)
 click to view
Estimated TM-score=0.71;
trivial target.		 >Papain-like cysteine protease AvrRpt2 (Length=140)
KLVVPYIPQNGTRGCWEATMNMLRAYFGQPPLDKGQLAYLYDAEGVPKELNGPLDYATRNRKAKLKNIPVPAGKSWDADK
IRALLDQHGPLEARIESPNDELVAHAIVLTGIDEDGDVICHDPELGPGQKVSIAMLNAAF
900 PF12096
(DUF3572)
 click to view
Estimated TM-score=0.71;
hard target.		 >Protein of unknown function (DUF3572) (Length=83)
QESAETIALQALGWLAGNEELLPVFLGATGASEADLRSRATEPDFLGSVLDFLMMDDAWVVEFCDSLGLSYETPMMARAA
LPG

Search by Pfam ID:
Go to page (83 pages in total): [First page] << < 4 5 6 7 8 9 10 11 12 13 14 > >> [Last page] [All entries in one page].

Bulk download:

[Back to server]

[an error occurred while processing this directive]

yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218