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I-TASSER QUARK LOMETS COACH COFACTOR MetaGO MUSTER CEthreader SEGMER FG-MD ModRefiner REMO DEMO SPRING COTH BSpred ANGLOR BSP-SLIM SAXSTER ThreaDom ThreaDomEx EvoDesign GPCR-I-TASSER BindProf BindProfX SSIPe ResQ IonCom STRUM DAMpred

TM-score TM-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE WDL-RF ATPbind DockRMSD DeepMSA

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13

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Modeling of Pfam protein domain faimilies by C-I-TASSER (Page 15)

Search by Pfam ID:

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# Pfam ID C-I-TASSER models ranked
by estimated TM-score
(click to view)
Full name and representative sequence
1401 PF14120
(YhzD)
click to view
Estimated TM-score=0.67;
hard target.
>YhzD-like protein (Length=61)
MKTYTLTVFEKNGEKLLDETFEAANDEEAKKIGEQKLREKNYHEKTHRCTSSSGKLILFHR
1402 PF14078
(DUF4259)
click to view
Estimated TM-score=0.67;
hard target.
>Domain of unknown function (DUF4259) (Length=123)
GTWDIGHFDNDTAADFCAGLDEAAAGDREGVLRRVLTLAADTGAEEYLDFDEAVEAVAAAALVASQCPGGEPVTSAYGPD
EPLPEFAVDLRPIAASALDRVLADESELAELWDESEDGPAWRR
1403 PF13948
(DUF4215)
click to view
Estimated TM-score=0.67;
hard target.
>Domain of unknown function (DUF4215) (Length=45)
VCQSNYYDDGANYICQSVCGDMVVTDGEDCDDGNTTRFDGCNNCK
1404 PF13937
(DUF4212)
click to view
Estimated TM-score=0.67;
easy target.
>Domain of unknown function (DUF4212) (Length=76)
AEYWSANLRLLAILLTIWFIVSFGFGILLVEPLNTIMLGGYPLGFWFAQQGSIYIFVALIFIYAVSMNTLDNKFDV
1405 PF13918
(PLDc_3)
click to view
Estimated TM-score=0.67;
easy target.
>PLD-like domain (Length=176)
MKELGVIFYNCSCLVLDLQRIFALYSSLKFKSRVPQTWSKRLYGVYDNEKKLQLQLNETKSQAFVSNSPKLFCPKNRSFD
IDAIYSVIDDAKQYVYIAVMDYLPISSTSTKRTYWPDLDGKIREALVLRSVKVRLLISFWKETDPLTFNFISSLKAICTE
IANCSLKVKFFDLERE
1406 PF13707
(RloB)
click to view
Estimated TM-score=0.67;
hard target.
>RloB-like protein (Length=194)
IVIASEGKDTERIYFKALAKEYSNPRVHVHILERSVDEQNNSSPEHVLKQLNDYKSQYELEADDELWLVVDKDRWTEAML
SRVATECSKEVAMHMALSNPCFELWLLLHIEDVALLTPEEQKQWMENRKKSKNADPYLKARLRQKMGSYHESSYDAQTLM
VHVENAIERARTLDKNPNDRWPQTLGTRVYLLAK
1407 PF13664
(DUF4149)
click to view
Estimated TM-score=0.67;
hard target.
>Domain of unknown function (DUF4149) (Length=99)
GFATAYGVSVWVTFVSSYVLAAALPRQQLGMVQSKLFPVYFRAVAYGIGLALAAHLLGRERSSLAARAQSFNLLAALALV
LANMLLLEPKATKVMFERM
1408 PF13455
(MUG113)
click to view
Estimated TM-score=0.67;
hard target.
>Meiotically up-regulated gene 113 (Length=84)
VKIGYTNNLARRLKEWNQKCKRQNAYHSSTESQVNMPHVHRVEQLIHTELKEYRLRKKCDGCGKMHKEWFQATQSHVVKV
LKKW
1409 PF13113
(DUF3970)
click to view
Estimated TM-score=0.67;
hard target.
>Protein of unknown function (DUF3970) (Length=54)
MAQIRLAGTKEEIVRILQSFDKHYEVTYTSKDYGKTNPKYKYSKDVRVYIELKL
1410 PF13096
(CENP-P)
click to view
Estimated TM-score=0.67;
easy target.
>CENP-A-nucleosome distal (CAD) centromere subunit, CENP-P (Length=177)
QKHRLSGNCHMITFQLEFQILEIQDKESLSSVITDLSIIMEPTEYSELSEFVSRAEEKRDLLMFFQSLRFFVEWCDYRKR
TFKHFKEKYPEAVQLSEGASSSCMGIRNPSQPGFELVIVWKIQIDEEGKVLPKLDLLTEVPLRALELDKNGVIETAPLSF
RTLLGVLGIEATLESLI
1411 PF13027
(DUF3888)
click to view
Estimated TM-score=0.67;
hard target.
>Protein of unknown function (DUF3888) (Length=88)
LEDLSIYFLTPYITKAVQDYYGKPSVIQWWKPKILEIKNLEPGSRYKFLLKIRVETFKGAHNPPYGIDIITLEIDFDKIR
IIDYKHIE
1412 PF13024
(DUF3884)
click to view
Estimated TM-score=0.67;
hard target.
>Protein of unknown function (DUF3884) (Length=74)
YEKVYIVNFEKCPYIPYIDQNVLKSLGKWYVSTGGEWICHSDLEWDDFKTLFNNLLEGTLKGNVRYEMDYMPFQ
1413 PF12959
(DUF3848)
click to view
Estimated TM-score=0.67;
hard target.
>Protein of unknown function (DUF3848) (Length=93)
NALLYDKMKAEQDKYRDWLLSQPPEEILNHTYEYTMKEDIVMCMEELELSPKQAKALLRSPCPLDDVYKEFKDREVEHMD
TIRDSIETRANDV
1414 PF12760
(Zn_Tnp_IS1595)
click to view
Estimated TM-score=0.67;
easy target.
>Transposase zinc-ribbon domain (Length=47)
PDEEACREYFEKRRWGNTPVCPHCGNAQKVYRYKNRRTFKCAHCKRQ
1415 PF12758
(DUF3813)
click to view
Estimated TM-score=0.67;
hard target.
>Protein of unknown function (DUF3813) (Length=64)
MRNELFQQAKSFVQQAVMVTNGFEEGDQDQAILRAKNAVSSAYANSTDAERRQLHQFQDQLDKL
1416 PF12688
(TPR_5)
click to view
Estimated TM-score=0.67;
easy target.
>Tetratrico peptide repeat (Length=118)
IAAFERACSFDSTGHSDKAVPLYREALENGLTGIRRRRAVIQLASSLRNVGHPEESLRLLTAEMEAGSDELDDALRCVMA
LTLTALGREREAVSILLIAMADHLPRYQRSMKNYARLL
1417 PF12651
(RHH_3)
click to view
Estimated TM-score=0.67;
trivial target.
>Ribbon-helix-helix domain (Length=44)
NRVRFSSSTKPDLFEKLKQLSEQTRIPISKLIDEALEDLIKKYK
1418 PF12612
(TFCD_C)
click to view
Estimated TM-score=0.67;
easy target.
>Tubulin folding cofactor D C terminal (Length=189)
SLIRGICKQAVEKMDKLREAAANVLPRILYNQMIYIPYIPFREKLEEIIPKEAEPKWAVPSYSYPCFVQLLQFGCYSRDV
LSGLVISIGGLQDSLKKISLSALLEYLEGVESEEHNTRMSREYMLSVDILWVLQQYEKCDRVIIPSLKTIEALFSKKVFL
NMEANTPTFCAGVLDCLAIELKGSKDFSK
1419 PF12586
(DUF3760)
click to view
Estimated TM-score=0.67;
hard target.
>Protein of unknown function (DUF3760) (Length=41)
PLAPVHHIIIDHLALVAPVTTLILSKYVYDITIPKLYRHVT
1420 PF12514
(DUF3718)
click to view
Estimated TM-score=0.67;
easy target.
>Protein of unknown function (DUF3718) (Length=64)
ICDYVKSDDKSRLRKKMKESRVKLRNVYSGISCDGSSLLRTAYNSNANDVGEFIAKRLPSTDLA
1421 PF12422
(Condensin2nSMC)
click to view
Estimated TM-score=0.67;
easy target.
>Condensin II non structural maintenance of chromosomes subunit (Length=151)
MMYCSPALMACKEGIKLLALILDKIGVRNGLTLLEKQILKSDLTDTDCQRYGDVFATTWLNAHSDANFDLTEELETDVYH
VFFQHALFGQKPLCAKFQKVLSAFAAQRKENPDFAIMISGMLNGCIYRALDSKNSAVQTSGMEVFFMFFPF
1422 PF12384
(Peptidase_A2B)
click to view
Estimated TM-score=0.67;
easy target.
>Ty3 transposon peptidase (Length=177)
VLTDLELESKDQQTLFIKTLPIVHYIAIPEMDNTAEKTIKIQNTKVKTLFDSGSPTSFIRRDIVELLKYEIYETPPLRFR
GFVATKSAVTSEAVTIDLKINDLQITLAAYILDNMDYQLLIGNPILRRYPKILHTVLNTRESPDSLKPKTYRSETVNNVR
TYSAGNRGNPRNIKLSF
1423 PF12333
(Ipi1_N)
click to view
Estimated TM-score=0.67;
easy target.
>Rix1 complex component involved in 60S ribosome maturation (Length=104)
EVRPHAEKILLYIRGGMTHLSNDVRTDTLNVLDWLLEVAGDEVVSCPGGWLKTLNSFSSMLGWNPNVSSAMTTKGWTSAP
KATLGMKKGPESQAKQIQVLAKFL
1424 PF12305
(DUF3630)
click to view
Estimated TM-score=0.67;
easy target.
>Protein of unknown function (DUF3630) (Length=94)
FGLAEYQQQEGRIVITAPRFDFDSFPELAEKLVKSLSASVIEKQWDADIHSWLIDFEGCQLFLKSEHYSESVWFEALAIE
DSKEELDFLASLFQ
1425 PF12101
(DUF3577)
click to view
Estimated TM-score=0.67;
easy target.
>Protein of unknown function (DUF3577) (Length=127)
IEQHELITRGIGYLNRPKDVTPKDGDPFLSCSIAALAGPVDEPEYRYFDTIVATPEAEHLVRRCVQAIEGDRKVLIAFRL
NDMKIDPYIRTKGEHAGEPAASLESTLVHIGLIKIDGTQVYPTSQAH
1426 PF12100
(DUF3576)
click to view
Estimated TM-score=0.67;
easy target.
>Domain of unknown function (DUF3576) (Length=100)
IGVNSFLWRASLDTLNFMPLASADPFGGVIITDWYSDPTTPNERFKATVYILDTRLRADALNVSIFRQQQQSGAWVDATV
DPATEIQIENAILTRARQLR
1427 PF11557
(Omp_AT)
click to view
Estimated TM-score=0.67;
easy target.
>Solitary outer membrane autotransporter beta-barrel domain (Length=330)
MLRFPFAVSTSVFAIILLPSFALSAQELNDLIQKELERNFATAIVLTDSDVFTVGFHDFDPNEWLNLDNEELGSADSVNL
RKKIGVSTLPFEFALYEDPDSQIKHSLQGRLSALGIEQDVSIVDTSVSDSHREYVLGAFLEYTNSRQLSENWTFDASIGA
HLMYYRSDYTYRSDALADYKSVIDGYLVNTDAWALVAEPNVQAKYLQMKPWGKWYYWSSAHYFYGQGWGEANRGQVGNPE
GWYWVNGVKMFYDFEKWGRAVQSVYTSFNRVDVGGDTSESLGTRHYYEASVGWLMTPPFKTQWVDNVGIGLSLNYGSALK
GGSLVLFFNQ
1428 PF11490
(DNA_pol3_a_NII)
click to view
Estimated TM-score=0.67;
easy target.
>DNA polymerase III polC-type N-terminus II (Length=115)
EYWEWIVQHSGIKSPLVQSLCNSNVPTYEDGRVILLAENEVIQNFLTNQALGPIESTYHRLGFPKFSVHTMIDESASQEK
IKEFHEQKAKSDQALAQKAEAAIKKANEKRQKQAD
1429 PF11397
(GlcNAc)
click to view
Estimated TM-score=0.67;
easy target.
>Glycosyltransferase (GlcNAc) (Length=379)
TIFVSIAAFRDKECITTLESLFTRAKYPRRVFLGISEERFETDVSCINSPKVLNSIDVNRSRTMRWKDLIPSAYDAASQQ
KHPKPTPVLHERRDEDIITCLLSADASDAPTSPGESMLNGCQVVTRHGHPDDARGPTYGRYITSLFYNNQDYYMVIDSHS
RFVPDWDVKMIERARLMPTRGVLSHYPNGYTPEAPDAEINKSDVMCMCKGVILPDNIPKLGARWIAIRGHPVLQGFVAAG
YIFGDAQFVRDVPFDPYLPFLFDGEEILYTVRLWTHGWDSYSPATALVYHNYMRVDAPRFFSVISRPGTKERRELERQTA
IQRVLYFLKRRVLNTTQLVVTDDEAHRQNPAIVREEAHFGMGSLRSLADYWEFVELSDA
1430 PF11336
(DUF3138)
click to view
Estimated TM-score=0.67;
easy target.
>Protein of unknown function (DUF3138) (Length=524)
MKKKLICLLVAGALPGFAGAASTSAQIKALQAQLNALQAQVKELRTALASQHGAAGGGASSQGAAAAAAAAPVDESSPDY
GRASATLTHDDVTQMKQQIANQQLKVDALTDAANTGPIAGLSVTGYIDPTYVFNRAAGTSSFLFANHESNYNYFNSTFGD
LYLDIKKTFGVGPMAPSAEITLMPNRGNGITLLQNSRGNIGNNILNTAVVNVPLSATTTLVAGLVPSFGGYEVQQSNQML
TLTHNLLYDFSDPGSYIGIGANYTKGNWAWKFLLGNEQYRTYGSVTQTGTNALGEPITTSNKVPTFTARVDYTWSSALDL
GGSFNIGRQTLGSATTQSGATVYGPGGQASSPYGAFFFAEADATYTLADIQYNAEIDYGQQQHAAFNGGRAQWYGLSLLA
HRKFNVPVLGRMGATLRYDFLANGKNGGGGGGIALNGNGMDTADGFGIDADCLATSKANGGLGFECKGANRQDVALDLLF
YPTQQITVKVEYRHDWANNKVFLRNDGSYSKSNDLLATQFIYSF
1431 PF11327
(Egh16-like)
click to view
Estimated TM-score=0.67;
hard target.
>Egh16-like virulence factor (Length=180)
SAHGVITSATGDAGGQGTALAVDAATPRDGTRRRPFQQDTTVFEEEDDDEGVARTGCGMTLQAGEINIPTAMQSVITQNG
GLPQVSPGGELTMTLHQVNGDGAGPYECMIDQTGTGASFTPMTVTQNVPGQDGRDRDGSETDFPLVAQMPANMACTGTAG
AMTGICMVRCQNPANAGPFG
1432 PF11324
(DUF3126)
click to view
Estimated TM-score=0.67;
hard target.
>Protein of unknown function (DUF3126) (Length=59)
ELQKLQGFLRQSFGNQGIKVTQARKNPDDADVLLGERQIGEIMVDDEDGDRSFAFAMKV
1433 PF11300
(DUF3102)
click to view
Estimated TM-score=0.67;
easy target.
>Protein of unknown function (DUF3102) (Length=131)
RTPLDIAAEINTIKQQTCKILLTNAVEIGRRLKEAKDLLKHGEWGKWLKESVSYSQRTAERLMQIFEEYGTKLLDSSDSD
GNPNSSLVTNLTYTQALILLGIPEEERDEFIAEHDVENMTKLELQQAVKDR
1434 PF11255
(DUF3054)
click to view
Estimated TM-score=0.67;
hard target.
>Protein of unknown function (DUF3054) (Length=104)
LAGDIVCVVVFCAIGRRSHAEGLTLAGIAETAWPFLSGTVAGWLISRAWRAPTAIAPTGVIVWLCTVVVGMLLRKASSQG
VAVSFIIVASVVTAVLLLGWRGVA
1435 PF10947
(DUF2628)
click to view
Estimated TM-score=0.67;
hard target.
>Protein of unknown function (DUF2628) (Length=85)
VRGTTDKFVFVRDGFSFWAFVFGPVWLLYQRLWLAFAGYMVLSIALEVVLTLLHAGSGMRSIVMLLIAVLMGLEAASLRR
WTLSR
1436 PF10932
(DUF2783)
click to view
Estimated TM-score=0.67;
easy target.
>Protein of unknown function (DUF2783) (Length=58)
LNTQPNLPRPDDFYEALIDTHRGLSDEQSAMLNAQLILLLANHIGDMAVLREALAAAR
1437 PF10901
(DUF2690)
click to view
Estimated TM-score=0.67;
very hard target.
>Protein of unknown function (DUF2690) (Length=92)
DCTGEDPELMGCGGEFAETATTTKVGTAVVEVRYSETCGVAWARITEAAPGDTVEITSTQGDDQPQTGTVNADKDAYTPM
LAVPSAAAAEAC
1438 PF10786
(G6PD_bact)
click to view
Estimated TM-score=0.67;
easy target.
>Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (Length=213)
LGKSDYQLFDRPIYAFKQLKESHPTDKIEQIKKEYKEHWQKWKEIQLQTAALLPDMYGMSKPKIESWTNGWNLRSHFWSA
YRSESRQDENACLAVLLNQKQYQIYLMYQHYKSEERYGSIAAYNQLLAILKEWSKTVDIKDYYIWPQPEHELDDHLALSD
YLSDTKKQEELKKAMRDRTFQMGKLFFYPQEIEHVEQIIAETLQELAPLYQKL
1439 PF10670
(DUF4198)
click to view
Estimated TM-score=0.67;
hard target.
>Domain of unknown function (DUF4198) (Length=226)
AHAHRQWLLPSATVLSGSDPWVTVDAAVSNDLFYFEHFPLRLDNLSVSAPDGSPAKAENQSTGRYRSTFDVHLTAPGTYK
LAVVNNGLFASYKENGQSKRWRGSADEFAQKVPANAQELQVTQSESRLETFVTAGKPTTQALKTTGRGLELAPVTHPNDL
FAGEPANFRLLLDGKPAANVEVEVVPGGNRYRDQLGEMKVKTDADGKFTIKWPSPGMYWIEAEVRD
1440 PF10618
(Tail_tube)
click to view
Estimated TM-score=0.67;
hard target.
>Phage tail tube protein (Length=114)
NRLAGTAYLSVDGQTYMLAGDFEYNPSLVTRETLTGQDTVHGYSEKPIAPHISCTLRDSGGLSVASLNAMTGVTVVAELA
NGKTIIGRNMWTVEAQTSKSTDATIEVKWEGPQG
1441 PF10547
(P22_AR_N)
click to view
Estimated TM-score=0.67;
easy target.
>P22_AR N-terminal domain (Length=110)
XVPFHGBSLYVVNHNGEPYVPMKPVVAGMGLAWQSQLAKLRQRFASTITEIVMVAEDGKQRNMVSMPLRKLAGWLQTINP
NKVKPEIRXKVIXYQEECDDVLYEYWTKGF
1442 PF10356
(DUF2034)
click to view
Estimated TM-score=0.67;
easy target.
>Protein of unknown function (DUF2034) (Length=204)
STLFRGTLYELLAKQLMSSLLNCCSLTRIGGSFDQGIDILGKWNLGHYWHALEPKPVNINTTKLQFGSIRPLLKDSREYN
DYHAIPQSERHKQANLSLENDINVLVQCKNYDTKIKPATIREISGSYHHHVNTKQARSRTFMFLVSPRPLTYSALKIVDS
LPIPMIHCKLSILKFEKGDIYSVSNWNGGELEALYMNAVARALL
1443 PF10318
(7TM_GPCR_Srh)
click to view
Estimated TM-score=0.67;
easy target.
>Serpentine type 7TM GPCR chemoreceptor Srh (Length=289)
IHFLSRFLHTVATIGTPLLIYSLYCILMRSKNSLKIMKWDLLTLHLVNISFHYFISALASPYVMLPAIAGSPFGIMKHFL
IPCNVQIYMSTVVVISSPVFYERWYYELFRKKSKTWGRVRKWWIAFHYFGVIGIVGFAASEAPDQAESIDMIFKHLPCLP
DYFHTSPIFVLSDKFSTIVIAFTVLVLIVASEDIFFTMLTLLFTSEELHSGKLSTQTFQSQTRFLCKLHLQVLIPLPTLI
LPLTYAILSIIGDYYNQVFNNLFVISASFHGVVSSLVLIILHSEYRRPL
1444 PF10155
(CNOT11)
click to view
Estimated TM-score=0.67;
hard target.
>CCR4-NOT transcription complex subunit 11 (Length=125)
VEFNPMVAIEILLKLMNSTQITEYFSVLVNMELSLHSMEVVNRLTNSVDLPSEFVHLYISNCISTCETIKDKYMQSRLVR
LVCVFLQSLIRNKIINVKELSLEVEAFCVEFGRIREAAGLFRLLK
1445 PF10144
(SMP_2)
click to view
Estimated TM-score=0.67;
easy target.
>Bacterial virulence factor haemolysin (Length=161)
MAKAKLKFRLHRTAIILICLALLVMLMQGASYFSLSHQMARSEQVEELAQTLTKQVAFSLAPLLDDNSDVDNQRISSILQ
QLTHHSRILDASVYQLDGTLVAHSGEQISVRDRLSLDGKRAGSYFNHQMVESIQGKDGPIGFIRVTLDTHVLATESKQVD
N
1446 PF10029
(DUF2271)
click to view
Estimated TM-score=0.67;
easy target.
>Predicted periplasmic protein (DUF2271) (Length=141)
LNVKVEIPRLNVAEYHRPYVAMWIERADQSPVQTLAVWYDAKNKEGEGTKWLKDMRQWWRKAGRDMQMPADGVSGATRAP
GEHALTFKDGKAPLGKLPAGDYQLVVEAAREVGGRELVRVPFSWPAKAAQTASAKGEHELG
1447 PF09948
(DUF2182)
click to view
Estimated TM-score=0.67;
hard target.
>Predicted metal-binding integral membrane protein (DUF2182) (Length=190)
FLMWSVMMVAMMLPSASPLILLHVRVNQQQEDGGDGFHGTVAFAIGYLLVWTSFSAVATLLQWGLEQLAVLSPMMASTSP
LLGAGLLLAAGIYQLTPFKNACLRHCRSPVHSLMQHWRRGTSGAFMMGFHHGVYCIGCCWLLMALLFVFGVMNLVWIAVL
SVFVLLEKVVPRGELVARVAGVGFIVAGVS
1448 PF09895
(DUF2122)
click to view
Estimated TM-score=0.67;
easy target.
>RecB-family nuclease (DUF2122) (Length=105)
GVAAQAGVPEVSKLAYKNNKSFIILPDLKDAIEIFKPEVVYLFTQSAEKTFTKDLLKDKNRVMLVFPGNESGFNKLELNL
GEPVKIEGLSSEISPVALVGIVTYC
1449 PF09876
(DUF2103)
click to view
Estimated TM-score=0.67;
hard target.
>Predicted metal-binding protein (DUF2103) (Length=97)
PKEKLGGRHTTLIGGRRGRKAISTVAEHPHVKKIVPGPIDAGGKGSQSGLRAKVTRADGNGNVRLLLRDGSSVQENRIVT
TAMDRETGERVRDDLNE
1450 PF09792
(But2)
click to view
Estimated TM-score=0.67;
hard target.
>Ubiquitin 3 binding protein But2 C-terminal domain (Length=141)
EYPHLIVPINSSTPDTAYGTQYFGTVSSTVSTIFNFDIPSSDSGKTCSLIFLFPTKDQLETSDYTFSGDGKIDFSQLESA
ASESTTYNNAPGVKQDYGDFTVSPGNSYLISTFSCPAGQTVSYEMKEAGSTYLNFFEDYNP
1451 PF09759
(Atx10homo_assoc)
click to view
Estimated TM-score=0.67;
easy target.
>Spinocerebellar ataxia type 10 protein domain (Length=95)
FRRDIVAVIGNCAFQRKNVQDEIRRKNGILLMLQQCVTDVDNPFLREWAIWSVRNLLEGNAENQQAVAELELQGSVDMPE
FAGLGLRVEVDPKTR
1452 PF09677
(TrbI_Ftype)
click to view
Estimated TM-score=0.67;
easy target.
>Type-F conjugative transfer system protein (TrbI_Ftype) (Length=106)
MWMIPGCLGMVVLNAAISYGIVRLNTPVTVAFNMKQTVDAFFDSAGQKKLTEAQSKALSGRFNAALEASLQAWQREHHAV
ILVSPAVVQGAPDITREIQQDIARRM
1453 PF09594
(GT87)
click to view
Estimated TM-score=0.67;
easy target.
>Glycosyltransferase family 87 (Length=237)
FTYPPIAAVVFTPLLLVPSSTMGVLLTLLSAVLMWWCIAIVLRRVIRGISTYDSRLFALFILPAALFTEPVNQTLQFGQI
NILLMTLVLMDTFTRKPWLPRGFWIGLAAAIKLTPAVFGLYFLVKRDWKGAITSIASGVGFTLLAFALLPSSSVQYWTET
LSDPSRIGNLSYITNQSIRGMFSRLMHERQDVVELIWMASVVLVLIGVTIAMVRVLRAGSVHGTVLLNSLIALLCSP
1454 PF09509
(Hypoth_Ymh)
click to view
Estimated TM-score=0.67;
easy target.
>Protein of unknown function (Hypoth_ymh) (Length=121)
RKVHAEVLNYCRAELLDENYFHAVFESTKGVAERIRSMSGLTMDGAELVSRTFSTQNPILVFGSLATESEKSEQKGFAHL
LVGLFGAVRNPLAHAPKTNWPMSEQDALDILTLVSLIHRKL
1455 PF08906
(DUF1851)
click to view
Estimated TM-score=0.67;
easy target.
>Domain of unknown function (DUF1851) (Length=73)
SGFKYFFNDLQDDYFIEKYLELDKYNEAIEKYGELEYDECFGYVPLLGLGGSEKVENLKKVKIKEHIELITQL
1456 PF08859
(DGC)
click to view
Estimated TM-score=0.67;
hard target.
>DGC domain (Length=105)
IFPCSGASNVGQLANQAAIEMTKNGKGNMMCTVGIGGRIAGLMKSAEGADEVVAIDGCPLNCAKKTLENAGIDVNEHVII
TELGIKKNKDLDLKQEQVNEVLEKI
1457 PF08800
(VirE_N)
click to view
Estimated TM-score=0.67;
hard target.
>VirE N-terminal domain (Length=131)
EKKKLPSVTFSANYRGGRSNATLVKYLGYIVIDIDHLSKEELARILQTVRACSYTRIAFISPKGMGLKIIARTQRPDGTL
PDTIQEIEDFHNAAYNKVASFYSQLCQTEIDTSGQDVGRTCLLSYDPGIYF
1458 PF08750
(CNP1)
click to view
Estimated TM-score=0.67;
easy target.
>CNP1-like family (Length=136)
RQSEWKENKVDALPPLPQSNDLISFDVSRNTPLQFAVDAKSVSVGSDGVVRYTVVVTSPSGAHNVNYEGIRCDTYEWRQY
AALNADHNGWDNTVANDWQRIENGELNAYQATLYQDYFCASKMPTGKAKTIVDNMR
1459 PF08695
(Coa1)
click to view
Estimated TM-score=0.67;
easy target.
>Cytochrome oxidase complex assembly protein 1 (Length=117)
IYFLAYGLGVTLACVVIFNYEKTSSPIINSVMYFLRRSQNAKQLLGDNINFKQSWPWIWGTLNTVRGDIDIEFSVQGSQN
SGILKLKATRESKLHPFHIHHWVLQINDAQKTQVNLL
1460 PF08588
(DUF1769)
click to view
Estimated TM-score=0.67;
hard target.
>Protein of unknown function (DUF1769) (Length=55)
GNDLVFGNDFDHPIRDRLPPGFNTAFRIVKWFIDPGLEGDVYADKPYLYGPLLSS
1461 PF08539
(HbrB)
click to view
Estimated TM-score=0.67;
easy target.
>HbrB-like (Length=164)
APYQELHVHVLPLFNSENLKLPIEELNGLVKQHIQAVISRGPSRARAVLEQDVKDLVNMGMITLNAKLQGLEEETLLTRV
VQIWGFFWDQVLLYLEGVFLPLQTEKILQNLARNTKTVRPGSPGSPAHDLPGVVPLVGCPTIDVRNVVLQSFRDSIIQPI
WQKL
1462 PF08102
(Antimicrobial_7)
click to view
Estimated TM-score=0.67;
hard target.
>Scorpion antimicrobial peptide (Length=43)
GKVWDWIKSTAKKLWNSEPVKELKNTALNAAKNFVAEKIGATP
1463 PF07867
(DUF1654)
click to view
Estimated TM-score=0.67;
hard target.
>Protein of unknown function (DUF1654) (Length=69)
SYERLGIRVQKIINSPTAQKARAALIFRQPDEPEDDWARLLEEIAENDNVTLAWRDDGGVQIFWTLPKE
1464 PF07735
(FBA_2)
click to view
Estimated TM-score=0.67;
hard target.
>F-box associated (Length=64)
EFHQVLMRNYTCLDFFHSTTMRLDELLMINSINCTFFYESFTEKEMNMFLKHWINGSNHRLECL
1465 PF07454
(SpoIIP)
click to view
Estimated TM-score=0.67;
easy target.
>Stage II sporulation protein P (SpoIIP) (Length=263)
NPMSLLEKEIPVFSQSSSKDLAYNKQEAPCDSFKLEDKEISKYDKEVKDNLNMPNKVVNVQEPKLKKKLDPKKPEVFIYH
THTTESYRPGEPTNFDTDKNVCAVGDELAKELSNNYGINTLHDKTVHDAQAYTQSYARSSVTLDKYLKQYGDFKLVIDLH
RDSVDNKKAVTIKMNGENVAKFMMVMARKNPHFNKNMQMANNIMKNSDRLFPGFCKGVFYYNYGTRYFNQNKSNNALLIE
VGADCNTTLEAKGSAKYLARIIA
1466 PF07452
(CHRD)
click to view
Estimated TM-score=0.67;
hard target.
>CHRD domain (Length=122)
FTAELSGRNEATPVVSRAFGEITAILDGNELSVSGSFTGLEGNFDVTVAGGSHIHTGYAGENGGITFELSPNLGILLKSG
TFEATSNTFTLSAEEMDALMERRMYVNIHTTLYPGGEIRGQL
1467 PF07377
(DUF1493)
click to view
Estimated TM-score=0.67;
easy target.
>Protein of unknown function (DUF1493) (Length=106)
DSIEQRIYELVRPYAGTYLFNIKRVTLTPETDLDTDLSIDELEAEDLMNDFFKKFNVERGGFKIETYFPNLPFSWNPFKK
TEPVPVPDFTIGMLIESAKAGKWLYD
1468 PF07258
(COMM_domain)
click to view
Estimated TM-score=0.67;
easy target.
>COMM domain (Length=77)
LPQLVDLEWRVDMKTASDSVSRMAVPTCILHMKIQDGGNVSSSSTSESSVTVELSKETLDTMLDGLGRIRDQLSAVA
1469 PF07183
(DUF1403)
click to view
Estimated TM-score=0.67;
easy target.
>Protein of unknown function (DUF1403) (Length=310)
ESNPTAPPTVPAWALAATDALGDVEAAFQAGAALGALDGLARAQPSWAGAWRQRLAVKSATASMRLAGRAEDEAALRDAW
HLRPPGADPGPAGTIFGAWRQLAVQPPVASPERLEKIVDQLGLHWDRAAVADLCTQIEELAASQRPAPFAAAAIVAHVVA
MRPDAELFGWWLADLVLAQSLRWPRPLPLLIAQAFGPVFRAEGGGTRIRPGQKGFERAVCVALVQGAAEACRLAAELSRR
AEKLLAVAPKLRAKGAGDVIFLLLNEDAVAGSLVTKTLSRFAARRLFERLQHLDAVRELSGRTSFRLFGL
1470 PF07077
(DUF1345)
click to view
Estimated TM-score=0.67;
hard target.
>Protein of unknown function (DUF1345) (Length=179)
PTRIIIGWDSGATCFLALAWSMMLGATPQKMQRSAQRQDEGRLAILTLVVVAACISLLAIGFMLKNTKGLPETLLVLHVM
LAGATVVCSWLLIHTMFALQYAHDYYRSDRHNATSETQDEGLDFPQETQPDYWDFLYFSFVIGMTCQVSDVQVTSRSMRQ
LSLVHGVLTFFFNTVILAL
1471 PF06697
(DUF1191)
click to view
Estimated TM-score=0.67;
easy target.
>Protein of unknown function (DUF1191) (Length=190)
RSARLLDLLIRDYTVKSFDRHFKTGTLHAVHLPANLSGIEVDTARFRCGSLRRYGAKVKEFHLGIGVIVQPCAERVIVVR
QTLGYNWSSMYYANYDLSGYQLVSPVLGLLAYNAGSDVSFGSPFQLGILAREKPIKIDFSNITMASNMTRSSMRPLCAGF
EGDGKVTLKNQVSPNVCFATRDGHFGLVVE
1472 PF06609
(TRI12)
click to view
Estimated TM-score=0.67;
easy target.
>Fungal trichothecene efflux pump (TRI12) (Length=598)
MTATVHEKGVDLESQPDDRLRAQALATTADELPEGYYTSPRVIASFAGFSLNVCATYFVLQASASALPNILQDIGQSENQ
GLFSTLWTMGQAVSILVMGRLTDRFGRRPFVIATHIIGLVGAIVGCTANKFNTLLAAMTLLGVAAGPAGSSPLFVGELMS
NKTKFLGLLTVSIPTIVMSAGPYFGQRLSIQGNWRWIFYIYIITSAIAVLLIVVWYHPPSFRQLHGKKARKRDELAKLDW
IGIFLVSVGVSLFLLGVSWGGKPNSPWNSSKIIGLMTSGLGSLVVFALYEVFGKPVQPIIPPALFKDTRGFVCILLISSI
MGAMNLCLTIIYPQQVINIFGSSLKNWQETAWMTATASFGTWAGVMILGNVFHLIRHIRWQILVGALWLTAFLGAMSSVN
RDNKNAAIALSFFSGFVVGWAQDITMLMVQFITTDEDLGVAFSVVAASRPFFGSIFTAAFISLYSNQYPKEIGSHLTSAM
RGTDIPQASFPSLLEAATTGRIDAVKALPGMTNSIAAVVSRAMADSYTASYANVYYFAMALGVIPIIASLCMRDFDRYLT
DHVPHQIYDRKKADKDVLDGDSDTPSSPTIHSTVEVKE
1473 PF06530
(Phage_antitermQ)
click to view
Estimated TM-score=0.67;
easy target.
>Phage antitermination protein Q (Length=118)
MRDIQLVLERWGGWAASDNSQVDWQPVAAGFKSLLPNTNKSRPQCCDDDGIMIDGCVARLKKYKPEEYELVILHYVFGVS
LRMIAKRRKCSDGTIRKEMQTAQGFIGGCLAMLDIRLD
1474 PF06059
(DUF930)
click to view
Estimated TM-score=0.67;
hard target.
>Domain of Unknown Function (DUF930) (Length=98)
EKLDPQTRLEQRCDTEAMERIGADKNRFKPDKVIAYTFADPVMKGDKMKATGAVFRSKGDWYKLAFRCKTDSEHLEVLSF
EYKIGERVPRENWDQLYL
1475 PF06056
(Terminase_5)
click to view
Estimated TM-score=0.67;
easy target.
>Putative ATPase subunit of terminase (gpP-like) (Length=57)
VRQRARQLYWQGYPPAEISRLMGINPNTIYAWKKRDQWDGTPPVQRVTQSIDARLIQ
1476 PF05982
(Sbt_1)
click to view
Estimated TM-score=0.67;
easy target.
>Na+-dependent bicarbonate transporter superfamily (Length=307)
PPVLFFFLGMLAVFFKSDLEIPQPLPKLFSLYLLMAIGFKGGYELAESGINNQIALTLIASVVMACIVPIYTFFILKIKL
DSANAAAIAAAYGSISAVTFITASSFLEKLHISYGGHMVAALALMESPAIVVGLILVRVFKEKNGEEEAFSWSKVLHEAF
LNGSVFLLVGSVIIGMLTGEKGWEKLEPFTQEIFYGALTFFLLDMGLVAAKRIRELAKTGAFLIGFAVLIPVINAMVGIL
IAKVLGFEQGNALLFAVLCASASYIAVPAAMRMTVPEANPSLYVSMALALTFPFNIIIGIPLYLEMI
1477 PF05617
(Prolamin_like)
click to view
Estimated TM-score=0.67;
easy target.
>Prolamin-like (Length=65)
ECWDSLMELKSCTGEVILFFLNGETHLGPNCCQAIRIIEHHCWPTMLSVLGFTPEEGDILRGYCD
1478 PF05610
(DUF779)
click to view
Estimated TM-score=0.67;
easy target.
>Protein of unknown function (DUF779) (Length=94)
LIEKLKAKHGPLMFHQSGGCCDGSSPMCYPQGELIVGDSDVLLGEIGGCPFYISKAQYEYWKHTQLIIDVVPGRGGMFSL
EGPEGVRFLTRSRV
1479 PF05258
(DciA)
click to view
Estimated TM-score=0.67;
easy target.
>Dna[CI] antecedent, DciA (Length=88)
PLGEVLGKLIKDRGWRDPAAKAGLFANWPQIVGPEIAEHCRPVSCADGELIIEAESAAWATQLRLFKTQILARLASHSGP
QVVTRLRI
1480 PF05230
(MASE2)
click to view
Estimated TM-score=0.67;
hard target.
>MASE2 domain (Length=88)
RLYLPRIVGLGIGFLCVLTALYPEHQPTSVWILLAVNGFIWPHIAYQWSIRSEAPYTTEIRNLLIDALLGGMWVAIMGFN
ALPAVVIL
1481 PF04844
(Ovate)
click to view
Estimated TM-score=0.67;
hard target.
>Transcriptional repressor, ovate (Length=57)
SEDPYQDFRSSMEEMVAAHGLREWHSLQELLQCYLRLNEKKNHKVIVMAFVDLLMHI
1482 PF04781
(DUF627)
click to view
Estimated TM-score=0.67;
easy target.
>Protein of unknown function (DUF627) (Length=105)
KNLFDNGDHIKALEIIEDLILVHREDKNAWILHLKQGQMFYELAKKTENPDVEFAYLLGSVQCFSEDGSLSPLCARTLIT
LAQKLGSVLYYKKSLEKAKQGLSVT
1483 PF04766
(Baculo_p26)
click to view
Estimated TM-score=0.67;
easy target.
>Nucleopolyhedrovirus p26 protein (Length=241)
NVKYTVDHETKRINVNSVLDAPVSIHVIPPNSDTNGDEKLTLLHQFPGVATNVIFPSITKDDDLYVQLNNGVLYKTRATR
VYTNFHTHKNRMVYGQLYTIAVDDFEIANKIYIGAPIYRNKQLVSVITCRFDDYEAGLVMYPVTGIRPQGLISGQIQYDD
RVGVETLRPSMSVYGRQQLPYKSAHMSVKQFAMTADMNRQLYRDLPRSVMLFHNNKEITITVVEGEFEMYRIRLDGPLVT
N
1484 PF04592
(SelP_N)
click to view
Estimated TM-score=0.67;
easy target.
>Selenoprotein P, N terminal region (Length=230)
QSSFCKQPPAWSIRDQSPMLNSGGSVTVVALLQASUYLCILQASRLEDLRVKLEKEGYLNISYVVVNHQGLPSQLKYMHL
KNKVSEHIPVYQQEENQTDVWTLLNGKKDDFLVYDRCGRLVHHLGLPYSFLTFPYVEEAIKIAYCEEKCGNCSLMTQEAE
DFCKMVSSATVGTTTEAPPPHHHHHHHHHHRHHHKHGHPHHGNDELSEDQQPEAEQAREHPAPRGLHRHH
1485 PF04479
(RTA1)
click to view
Estimated TM-score=0.67;
hard target.
>RTA1 like protein (Length=207)
VEVIGYVGRCVSSKESPNWTLGPYIIQAILLLVAPALFAATIYMELGRIMILVRGEDRAVIRRTWLTKAFVGGDILSFFL
QGGGGGYQASGTLEALKTGSDIIIAGLFVQLLFFGVFLVVSVLFHRSIIRIPTSQSANPNVPWKRHLKVLYLTGTLIMVR
SIFRAVEYLQGFNGYLLRHEAYLYVFDAALMFLVMIIFNFIHPGEIM
1486 PF04463
(DUF523)
click to view
Estimated TM-score=0.67;
hard target.
>Protein of unknown function (DUF523) (Length=133)
ILVSACLLGIDCKYNGKNNKNDKIIELLKDHELIPVCPEIMGGLPTPRIPAEIHQNKVIAKDGKDVTKQYQKGAEETLKI
AKLYNCHTAILKEKSPSCGCGKVYDGTFTGTLINGDGITARLLKEHGIKITGE
1487 PF04308
(RNaseH_like)
click to view
Estimated TM-score=0.67;
very hard target.
>Ribonuclease H-like (Length=142)
EMMEDILEYIKGLPCSSYKIVVGTDSQVRRETCFVTAVIIHRMGKGARFFYRKSTERKIKSLRQKIFYETTMSLEEGAKI
TEYLSQSGLEHLNVEIHIDVGRHGETKDLIREVVGMVTGSGFEAKIKPDSFAASSVADKYTK
1488 PF04240
(Caroten_synth)
click to view
Estimated TM-score=0.67;
hard target.
>Carotenoid biosynthesis protein (Length=214)
GGVVYMLLATAAVAVYAYRTLGLWHWLGFMAPAIALSLCSELLGTSTGFPFGHYRYLTGLGYKVAGLVPFTIPLSWFYLG
FSAYLLARAGLESRQIPNWVQYVGAIALGATMLTSWDFVLDPAMSQTTMPFWIWEQPGAFFGMPYQNFAGWLGTGTVFMT
VATLLWKAKPVTLPRTQLGLPLAIYLSNFAFATIMSVAAGIYIPVFLGVILGVV
1489 PF04213
(HtaA)
click to view
Estimated TM-score=0.67;
hard target.
>Htaa (Length=158)
GGELTWAFKDSFLSYIDSGIANGTWEVAGGVEDLGTGFVWPFEAAAVDPQLVVGTASYGGSVRFTGHDGVLDTTVANPTI
EFSADGAYLLLDLLSTTQEGEAVDVTQVRFAELDLDAGTVTGAEGEIVIEGVPAVLTEAGADSFGTYPAGEALAPVSA
1490 PF04133
(Vps55)
click to view
Estimated TM-score=0.67;
hard target.
>Vacuolar protein sorting 55 (Length=115)
AALAFAGVLGLTLLVLGCALPMFGNWSPMFVIAFYIFSPVPLMIARRFQEDMTGTNACVELALFITTAIVVSAFALPTVL
AHAGTIKVTAMLLVNSGSVVMFLTILAYFYLHREE
1491 PF04080
(Per1)
click to view
Estimated TM-score=0.67;
easy target.
>Per1-like family (Length=246)
PRYMGLLGWDCTEECKYECMWDTVETFQRAGKDVPQFYGKWPFVRVLGAQEPASVVFSVLNGLAHLVMIGVFRSRVPKDA
TLYWTVNVYALVAVNAWIWSTVFHTRDLVWTERLDYFSATSIIFFQLFHCFRRCFGGFWKSLIFGAVLLRLFAGHVYYLS
AVKFDYGYNMKVMVTVAVVNGVFWFVLAIKNRKQPHMWKCGTAIVLVNLLGLLEVGDFAPIWWTFDGHALWHAGTAPVVV
LWYRIL
1492 PF04028
(DUF374)
click to view
Estimated TM-score=0.67;
easy target.
>Domain of unknown function (DUF374) (Length=65)
GARRVTVLASRSRDGELVARYARGFDLDVVRGSSSRGGAVALRTLVGVLGAGRDVAVVPDGPRGP
1493 PF03905
(Corona_NS4)
click to view
Estimated TM-score=0.67;
very hard target.
>Coronavirus non-structural protein NS4 (Length=45)
MQMATTIDDTDYTNIMPSTVSTTVYLGGSIGIDTSTTGFNWFSWY
1494 PF03715
(Noc2)
click to view
Estimated TM-score=0.67;
easy target.
>Noc2p family (Length=294)
FLSTVLKVMYLSFVRNARFVSPTTLPGINFMRRSLAEMFTLDTECSYQHAFLYIRQLAIHLRNAVTLKRKESYQAVYNWQ
FVNALKLWGDVLGATVNSELSALIYPLVTIIQGVIKLIPTAQWFPLRFHCIRVLINLTKSTRIFIPVLPFILEILQSATF
NKKHTQISLNAMPFTCILRCTRPQLEELSSRTQVTENIFSTALEYLAAESYSLTFPDLVVPAIVNLKQYLKTCQVAATSR
KLKQLLDLIIDNSRIIEAERMKINFSLRDAALIQSWETQMENNGTPLLTFYTNW
1495 PF03653
(UPF0093)
click to view
Estimated TM-score=0.67;
easy target.
>Uncharacterised protein family (UPF0093) (Length=143)
GNLYDWVKALHVISIIAWMAGLLYLPRLFVYHCEAAAGSATSETLKVMERRLLRAIMNPAMIASYVFGIWMLALNPGWFQ
SGWIHAKLALVIGLTGVHMMMAGWRRKFAEDRNQRPQRFFRVMNEVPTLLMIGIVILVIVKPF
1496 PF03504
(Chlam_OMP6)
click to view
Estimated TM-score=0.67;
easy target.
>Chlamydia cysteine-rich outer membrane protein 6 (Length=91)
MYSTRVNDDCNVEISQSVPEYATVGSPYPIEIFAVGKKDCVNVVITQQLPCEVEFISSDPASTPTPDGKLIWTIDRLGQG
EKCKITVWVKP
1497 PF03227
(GILT)
click to view
Estimated TM-score=0.67;
easy target.
>Gamma interferon inducible lysosomal thiol reductase (GILT) (Length=102)
LKIYYEPKNQRSRNIFITQFDRTRTKIDNFILKIQPIPIGQLSNNDNENPECLNDSDCMQTYQHSCIMEEYSNQTDKIID
FINCYFGQKFTETDSTKNCFNE
1498 PF03125
(Sre)
click to view
Estimated TM-score=0.67;
easy target.
>C. elegans Sre G protein-coupled chemoreceptor (Length=333)
IRSQNTTSYFWLPLFFYDEPYWAQVVHSFIEIFLYIFVGYVVSVSIRIMLKVRLFHDNLVYIGTPIFALWSTLISAKLIV
IAYRLKFLKVDYEIGEHITLWTDNPDKMLTVNSTEGLEPLMLGGFWVWHFGFSVMFGSFAVVVERVIASMLIDNYELSTD
LYIPIILNTVYQLSTISISIALVFNKLGEIVLNASWITCFTISLSMYFYIKRINKRWLQEMEDPNRKRVFTVSQRFQVRE
NLRALAFGKRIVFTVMGSLIFCGIGMVALSHDIVPTFLLHIGENLLHPLFVCVVTMYGHPSWKSRFKRSFPRIHFLRKPP
NRVVSVEIMEDNV
1499 PF02659
(Mntp)
click to view
Estimated TM-score=0.67;
easy target.
>Putative manganese efflux pump (Length=153)
MRYDQALVISLYFGVFQALMPLIGWLLGTSFSRYIQAFDHWIAFVLLAFLGGKMLWDVFHEKEDGEQESAERRLDHRELF
MLAIATSIDALAVGIAFACLDVNIWSSISIIGVTTLVISFAGVWIGNRFGNRFQKKAEIAGGLVLILIGVKIL
1500 PF02042
(RWP-RK)
click to view
Estimated TM-score=0.67;
trivial target.
>RWP-RK domain (Length=46)
FLEDILQTSQMTIEDAAKSLHVSISTLKRACRKFGIPRWSRHHINQ

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