Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

I-TASSER C-I-TASSER QUARK C-QUARK LOMETS COACH COFACTOR MetaGO MUSTER CEthreader SEGMER FG-MD ModRefiner REMO DEMO SPRING COTH Threpp BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign GPCR-I-TASSER MAGELLAN BindProf BindProfX SSIPe ResQ IonCom STRUM DAMpred

TM-score TM-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

[Back to server]

Modeling of Pfam protein domain faimilies by D-I-TASSER (Page 6)

Search by Pfam ID:

Go to page (83 pages in total): [First page] << < 1 2 3 4 5 6 7 8 9 10 11 > >> [Last page] [All entries in one page].

# Pfam ID D-I-TASSER models ranked
by estimated TM-score
(click to view)
Full name and representative sequence
501 PF07288
(DUF1447)
click to view
Estimated TM-score=0.82;
trivial target.
>Protein of unknown function (DUF1447) (Length=68)
IYKVFYQETKTRNPKREETHSLYIEAADEVTARQRVEENTPYNIEFIQPLEGSHLEYEQENADFKLTE
502 PF14125
(DUF4292)
click to view
Estimated TM-score=0.82;
easy target.
>Domain of unknown function (DUF4292) (Length=209)
VSFETLAGRLKVRYQDEKQTQNVSVSIRMEKDKAIWMSANILGIPLAKVLITPNSVKYYEKISGSYFDGDFRLLSDVLGT
ELDFNKVQNILLGQTIYDLRQEPYILETSDRGYVLQPKKQFDLFTRLFLLNASTYKTEAQQLVNNNENQSAIVTYPTYQT
ISGQVFPNEINIVANQNNKNTLIDIEYRSVEFNVDVSFPFSIPSGYDEI
503 PF05705
(DUF829)
click to view
Estimated TM-score=0.82;
easy target.
>Eukaryotic protein of unknown function (DUF829) (Length=225)
PLVFIFAWLQASEKHLAKYAEFYLDQGFEVLCVHITPWQLVWPVNGSQKVAADVVKFLANNELPEGIVIHGFSVGGYLWG
ECLVKLQADPSGKRVLEKIRGQVWDSLADITEIPVGVPHAVLPHNPTLQGVLRNYINYHMKLFHEEATQYYVKCTRLFHY
EPAPCPALLLVSKTDPVGTEKANNRLRGIWESVGVQTSLKCWDKSPHVGHFHKHRDEYIELLVAH
504 PF09551
(Spore_II_R)
click to view
Estimated TM-score=0.82;
very hard target.
>Stage II sporulation protein R (spore_II_R) (Length=126)
EKVIRFHVIANSDSTEDQALKLKVRDNVLKYISPKLKNSKSIEESREIIKENNDEINKIAAKTIEENGYTYTVKSKLSHE
NFPVKTYGNITLPQGNYEAYRIIIGNGQGHNWWCVMFPPLCFTDIT
505 PF18750
(SNAD4)
click to view
Estimated TM-score=0.82;
trivial target.
>Secreted Novel AID/APOBEC-like Deaminase 4 (Length=122)
YTIESKQKNRFLRNGVFQNQDHPYTRLHAELRFLSWFHDNWLCPGNSYRVTFYMSWSPCSECAEELTTFLAGHRNVTLTI
FFSKLYYCDPDSSNREGLKTLAAGGARLFVMFDTDFSYCWTN
506 PF09674
(DUF2400)
click to view
Estimated TM-score=0.82;
easy target.
>Protein of unknown function (DUF2400) (Length=228)
DPICIPHSFTKKQDIEIMGFWAAVLAWGNRTTIIKKCKELVKLMDGAPHDFVCNHQESDLKAFLSFKHRTFNATDTLYFI
HFFQDFYQKHSSLEEAFTQDFSAEEPHIEKALINFHELFFSLPEYPERTRKHVATPARKSACKRVNMFLRWMVRNDEKGV
DFGIWEKIKPSQLICPCDVHVERVARKLHLLDRKQMDWKTALELTDNLRKLDPQDPVKYDFALFGLGV
507 PF13698
(DUF4156)
click to view
Estimated TM-score=0.82;
easy target.
>Domain of unknown function (DUF4156) (Length=99)
NSLNYGAEQVRVMTSEPGKECRYLGDITGSQGNFFTGGWTSNSNLETGARNDLKNKAYKMGGNTVVLLTQRAGQTGSSWH
GSGSSKQTNVTLSGNVYRC
508 PF13335
(Mg_chelatase_C)
click to view
Estimated TM-score=0.82;
easy target.
>Magnesium chelatase, subunit ChlI C-terminal (Length=97)
EKSSAVRERVIAARKIQEERFKDSQGVFTNAQMNSKLLRKHCQIDEAGNELLKNAMEKLGLSARAYDRILKVSRTIADLA
GHENINNEHLSEAIQYR
509 PF12939
(DUF3837)
click to view
Estimated TM-score=0.82;
trivial target.
>Domain of unknown function (DUF3837) (Length=100)
MVTSIARQSVIIKCNMQKSVLTGNYEFYYAAGLIAKLSGVEFSEDIKPIELGEFVHQEIEKTEPKDEQEKYLFSMLKDYK
PTDEYDEQMKELLLWGKGEQ
510 PF14459
(Prok-E2_C)
click to view
Estimated TM-score=0.82;
hard target.
>Prokaryotic E2 family C (Length=131)
AFDEQACATEGRASLDLLVRLVARLYPTICLLPSGEEAKKLAKNLASLARSINEDITIARRGSSALSHCLVVGSTNPEIS
CPKFFLGSDGWIAKFSPEEPVGTAGSNNAFGAGAAACIAASNLFRHIFRDQ
511 PF18840
(LPD25)
click to view
Estimated TM-score=0.82;
hard target.
>Large polyvalent protein associated domain 25 (Length=99)
NQQPTVTINFSENGELEQGDVLPYGLAERTFERLDREARAERDDPDRGRYYKTDFTVTYMMEGQLYEYNGRQDFGDGDGP
LSDHIRGHAEYYRNDPQYQ
512 PF13852
(DUF4197)
click to view
Estimated TM-score=0.82;
very hard target.
>Protein of unknown function (DUF4197) (Length=200)
TDNGTIVSGLKEALSVGTGNAVTSLSKMDGYFGNQMVKILLPEKVQTAGNVLGKLGYQKQVDDFVLSMNRAAEKAAPKAK
AIFVDAIRQMTFEDARNILNGGNTAATDYFRSKTSAKVFNAFKPIVSSSMDEVGVTQAYKAMIGKYTSSIPFAKTESLDL
DTYVTNKATDGLFYMVGEEEKKIRTDPAARVTDLLKKVFG
513 PF10118
(Metal_hydrol)
click to view
Estimated TM-score=0.82;
easy target.
>Predicted metal-dependent hydrolase (Length=241)
NLDFGIDESLPKYWWGGNPYRTRLFDAVQCTFPDGERYFIKSVVAFRQKVSDPVLLADVRAFSRQEGQHGIAHQQYNALV
EGRGVPLTKIIQPAIDRFNRFSARLSPEFNVAITAAAEHFTAMMAECFFAKKATMAEVEPHMKAMLAWHAIEEMEHRAVA
FDVMKKIAKVGYFKRVWALIYLQGGMYEVMVRMPHAMLKADGFTRLQRWRMQIRNIPWLLRLFGPLNRKALSYFKPGFHP
L
514 PF12594
(DUF3764)
click to view
Estimated TM-score=0.82;
easy target.
>Protein of unknown function (DUF3764) (Length=84)
ETSVFTFRISVPFEQWAAIFDSEDIRKMHDENGIQPLYRGVSEDDPMKVIVIHQAEAGVAKAFFEASREPIEAGGHIWDS
TEIT
515 PF16258
(DUF4912)
click to view
Estimated TM-score=0.82;
easy target.
>Domain of unknown function (DUF4912) (Length=108)
HITLWRINDHTANAEWEVPDSAKAAAIENGGRYPQLRICDVTDIDDLDGQPPHSLQTYDWDESSQHQQFPNLESHRTYLA
EIGYVTNDDQWLRLARSNRVRTPGVKTT
516 PF11390
(FdsD)
click to view
Estimated TM-score=0.82;
easy target.
>NADH-dependant formate dehydrogenase delta subunit FdsD (Length=61)
HLIRMANQIGTFFESMPDRTEALEGIATHLKKFWDPRMRHELLQLLEEDGEGVHPIVREAL
517 PF05284
(DUF736)
click to view
Estimated TM-score=0.82;
hard target.
>Protein of unknown function (DUF736) (Length=102)
QIGEFTRTKNGYAGHIRTLSLDAEIVLVPAEHTDAENAPDYRVHHGSDDGPEIGAGWKRTGEKAGDYVSLQIDDPTLAQP
IRANLFQSAEDKSAWNLHWNRP
518 PF07694
(5TM-5TMR_LYT)
click to view
Estimated TM-score=0.82;
easy target.
>5TMR of 5TMR-LYT (Length=159)
ERGFSMADRALIVIVFGTLSIYGTTQAILFDGAFINFRDLGPMIAGLIGGPVLGGLAGLIGGLYRYSLGGWTALPCAVAT
ILAGVLAGYAAICWKGRLDYLRLTGLGVFVEAIHLLVIFPLLVYPAPLEDIFNLIRSFLLPMILTNVFGLAIFLYILKE
519 PF02494
(HYR)
click to view
Estimated TM-score=0.82;
easy target.
>HYR domain (Length=80)
DNENPVISGCPTDQSVNTDSGRATAVVKWTPPTATDNSGNQTLTSSHNRGDLFPIGNTTVTYTSTDAAGNIDICTFLITV
520 PF15499
(Peptidase_C98)
click to view
Estimated TM-score=0.82;
trivial target.
>Ubiquitin-specific peptidase-like, SUMO isopeptidase (Length=273)
CVQWKNAYALCWLDCILSALVHSEELKNTVTGLCSKEESIFWRLLTKYNQANTLLYTNQLSGVKDGDCKKLTSEIFAEIE
TCLNKVRDEIFISLQPQLRCTLGDMESPVFAFPLLLKLEPHIEKLFLYSFSWDFECSQCGHQYQNRHMKSLVTFTNVIPE
WHPLNAAHFGPCNNCNSKSQIRKMVLEKVSPIFMLHFVEGLPQNDLQHYAFHFEGCLYQITSVIQYQANNHFITWILDAD
GSWLECDDLKGPCSERHKKFEVPASEIHIVIWE
521 PF04577
(DUF563)
click to view
Estimated TM-score=0.82;
hard target.
>Protein of unknown function (DUF563) (Length=206)
NVYFHWMVDVLPRLELLRQSGINFDQIDWFLVNSYQAPFQRETLTRLGIPEFKILESDQFPHIQAQQLIVPSFAGHTGWL
QPWAIDTLRRWFLPKSSNSGKNYPERIYISRGDASYRRVLNEDEVIQFLRPWGFVTVQLETLSFTEQVALFAEAKVIMGA
HGSGLTNILFCQPGTQVIEFMSPHYNRHYYWVISQYLGLEHYCLTG
522 PF04343
(DUF488)
click to view
Estimated TM-score=0.82;
hard target.
>Protein of unknown function, DUF488 (Length=125)
LSELIALLRENKVSCLIDIRAYPGSRTNPQFNKKNLESEIPKADIEYFHMHALGGRRHNSKGVTSSPNTFWQNKAFQNYA
DYALSDAFQEALSGLKNITHKKTCAIMCAEAVWWRCHRRIVAYYL
523 PF11199
(DUF2891)
click to view
Estimated TM-score=0.82;
easy target.
>Protein of unknown function (DUF2891) (Length=323)
HFAGLALKCVAREYPNKPEHVMNTGRDVESPKTLHPAFYGCYDWHSSVHGHWMLVRLLRMFPGLPEAQDIRKALDANLTA
ENIRAETAYLKQANRQSFERTYGWAWLLKLAEELATWNDTNARSWSSNLQPLVDALVSQYLTFLPKQTYPIRTGVHPNTA
FGLAFAIDYAKTVQNEKLAALIAERSRTYFANDKDYPAAWEPGGEDFFSPALMEADLMRRVLKPAEFQRWFRRFLPRLAA
GVPRSLLQPAVVTDRTDPKLVHLDGLNLSRAWCMRSIATALPMNDPERKVLARSARLHAGDALAHVASGDYAGEHWLASF
AVY
524 PF15603
(Imm74)
click to view
Estimated TM-score=0.82;
hard target.
>Immunity protein 74 (Length=79)
ILDITRGHIKVKIGGKTVTLQGEMFFPGNDKMGFVLYRNSIKNWDEPNQDLPITPDEVDAIMDDIRNDFAKGGHTFAVE
525 PF17236
(DUF5309)
click to view
Estimated TM-score=0.82;
easy target.
>Family of unknown function (DUF5309) (Length=288)
DLTDVIYNIAPTETPFLSMCGTTEATSTKHEWQTDDLAPAANNKQVEGDDAAAAAASPTVRVDNQTQISSKTVSVSGTQD
AVSSAGRKKELAYQVSKRGKEIKRDMEFALTQNTTAIAGDSATARQLRGLEGWIATNNSLGATGVAPNPINNTAPTDGTQ
RAFTESLLKDVLQKCWNNGGDPDVIMVGGTQKQVFSTFDGGATKQTDSKDKKVVATVDIYVSDFGTLKVVPNRFQRARTA
FALQSDMWEVAYLRRFKTEPLAKTGDSEKRMLLAEYTLKAKNEKSSGA
526 PF16798
(DUF5069)
click to view
Estimated TM-score=0.82;
trivial target.
>Domain of unknown function (DUF5069) (Length=124)
NAGVAGVVGVARMADKARAHDRGTLGDYLYGNDSGQDKALLEYLRIPAEAFEKAAVGMDDEALGRWVLEQAKRTPEEIAA
FDREMLGREPATERMKAMLKERVAKFAPGRTDIRTAFQSQELDD
527 PF18877
(SSSPR-51)
click to view
Estimated TM-score=0.82;
trivial target.
>SSSPR-51 domain (Length=48)
VVTEYVDEDGKTIAPKENGKQPKKDIEGYEFVETKTDEKGNTKHIYKK
528 PF18185
(STALD)
click to view
Estimated TM-score=0.82;
easy target.
>Sir2- and TIR-associating SLOG family (Length=208)
DLKRYNIEALIIDEYSQITNILKMIEKSINEDSIFISGSAHSYNPWDEKEAQKFINNLSKRLIADNKKVISGFGLGVGSF
IITGALEQMYMKQEKINNNQLILRPFPQKALPNQKIEELWDKYRNDMISLAGISIFIFGNKINKEGNIIDANGVYLEFEI
AKAKDNIIIPVGSTGNVAKKIWKEVKDKFDEFYPKANSKLKELFEDLN
529 PF04294
(VanW)
click to view
Estimated TM-score=0.82;
hard target.
>VanW like protein (Length=130)
NRVNNIKIAAEELDGTIIEPGEIFSFNETVGRRTKEKGYKEATIFVDGEKSKGVGGGICQVSTTLYNAALEAGLKIVERH
RHSREVSYVEKGKDAAVAYNSKDLRFKNTKDYPIEIKVTVTEDEIRVSIY
530 PF09605
(Trep_Strep)
click to view
Estimated TM-score=0.82;
easy target.
>Hypothetical bacterial integral membrane protein (Trep_Strep) (Length=183)
TKDLITTGIFTAIYFVVLFACGMLGFIPILFILLPFIAPIVTGIPFMLFLTKVKKFGMVTIMGLLLGLIMFLTGHTFIPI
ITGLVFGLIADLIFKAGNYQNFKNSVLGYAVFSISVVGYMIPMWVMRDSYFEYIRSSMGTEYVNTVMALTPDWMLFVVIL
VSFIAGIIGALLGKSLLEKHFKR
531 PF09986
(DUF2225)
click to view
Estimated TM-score=0.82;
easy target.
>Uncharacterized protein conserved in bacteria (DUF2225) (Length=212)
LYNKEVNCPVCNSKFHVKAVKSSSYRLDSKDSDFFLRYALINPYFYDVWLCNECGYAALKVDFSKIKKYQKQLVLDKISP
RWKKRYYGEIFNLDIAIERYKLALLNYTLIEGKPSQKAMTCLKLAWMYRLKGNKEHEKDFIKNALKGFEESYESEEFPIF
GMDKYTIVYLIGELNRRLGNKDKALLWFSYVITTPHVSYKLKSLARDQRDLI
532 PF13645
(YkuD_2)
click to view
Estimated TM-score=0.82;
easy target.
>L,D-transpeptidase catalytic domain (Length=165)
NFESFSKAFEGYEQLKNQGKIENDILTIVDFSLPSTEERMWVIDMKTKTILLQSLVAHGRNSGDNVATSFSNVSESFQSS
LGFYTTGEVYQGKHGFSLRLDGLEKGINDNARNRAVVIHGADYVSKSFIKQHGRLGRSQGCPAVPYEVHETLINTIKNKS
CLFIY
533 PF10974
(DUF2804)
click to view
Estimated TM-score=0.82;
easy target.
>Protein of unknown function (DUF2804) (Length=324)
DGSLREPGWSKSLVQTYDRKQIKAPRMRIKEWDYYLVLNEDFAGAFTLSDDGYIGLQSVSLLNFKEGWEHTETILNAFPM
GKMQMPSDSRQGDIVYRDKRLHMEYTLEEGQRRIRCKFDNFYQGKTFRCDITLVQPKMDTMVIATPWKEKKTAFYYNQKI
NCMPAKGKMEYDGKIYRFDPSTDFGTLDWGRGVWTYDNRWYWGSGNQMIDGKPFGFNIGYGFGDTTAASENMLFYDGKCH
KLDDVTFHIPDGDYMKPWKFTSSDGRFEMNFEPVLDRAARTNALIIESDQHQVFGRMNGKAVLDDGTVIEVKDMMCFAED
VHNR
534 PF09859
(Oxygenase-NA)
click to view
Estimated TM-score=0.82;
easy target.
>Oxygenase, catalysing oxidative methylation of damaged DNA (Length=172)
GEYKYFSYPLPEVIAELRTALYPRLAPIANRWNEAMAIDIRYPAEHADFIKRCHKAGQTRPTPLLLQYGAGDYNCLHQDL
YGEHVFPLQVAILLSQPEQDFTGGEFVLTEQRPRMQSRAAVVPLKQGDAVVFAVHHRPVQGTRGTYRVNLRHGVSQLRSG
HRHTVGIIFHDA
535 PF13366
(PDDEXK_3)
click to view
Estimated TM-score=0.82;
easy target.
>PD-(D/E)XK nuclease superfamily (Length=117)
QLTGVVIGAAIAVHRELGPGVDEAACEQALSLKLTALGIPHQCQKPLPLLYKGASLDCGYRLDLLIDGRLPVELKCVDKI
LPIHVAQTLTYLRLGGFPLGLLINFEVCALKQGIRRL
536 PF14158
(YndJ)
click to view
Estimated TM-score=0.82;
hard target.
>YndJ-like protein (Length=250)
IVMLGMLVVVPLGLRLVGSPALHRIRRLWPLLAAPGAVALWLPRGGTATALAAVYALGTLALALHAPARLLRTRSLAPAE
VAVLTALAAPSVAGLALVAERGGHELFGFDLEILALTVPHFHFAGFAAALVAGLVCRAAGRRPAGRFAALSVPLGTLLVL
TGYFVDDWAELAGAVVLTAGMWTVALLTWQDVRDDRQDRTTRALLAVSAAVLVATMLLALSWALGEATGIPHPSLTWMAA
THGLGNALGF
537 PF10277
(Frag1)
click to view
Estimated TM-score=0.82;
hard target.
>Frag1/DRAM/Sfk1 family (Length=222)
HWWMLPLASLIAWYGMLIAMLACWSFQGHPIYWFMDVRQFPVYISDIGATNLKPLFISCAGFQGLAFFLTLCCERYLRAK
QKLIPNFNKKEVVSSYLSIFFCAIGELGILFVSIFDTHLFHTVHITMVGIFISFMFFSCFSLIFEYFSLGRNYYRKFNVK
KYNYLMLSAITKLIWCIFAMGLAIGFGVCMRKRLRSQSAALEWTLSFWYGVFLMILIFDLYP
538 PF14285
(DUF4367)
click to view
Estimated TM-score=0.82;
easy target.
>Domain of unknown function (DUF4367) (Length=108)
LEFTYLPEGMIEKEHEEDEFGYYTYWYWEDTDGRFLELERWDITEDVSSTQLLDTENAEITHFQVHGEEAMGIEKGLDHT
IHWTEGQFVYTLSGTVPMEELKLVAEGI
539 PF10626
(TraO)
click to view
Estimated TM-score=0.82;
easy target.
>Conjugative transposon protein TraO (Length=167)
LPGMKGLQVTGGMADGVHWNSKSDFAYYFGAAMSTYTKNGNRWVVGGEYLEKHYPYKDLQIPVSQFTGEGGYYLNFLSDR
KKTFFLSLGLSALAGYETSNWGDKLLPDGSTLTDKDGFVYGGALTLELESYITDRVVFLINARERCLFGSSVGKFHTQFG
VGLKFIM
540 PF09912
(DUF2141)
click to view
Estimated TM-score=0.82;
hard target.
>Uncharacterized protein conserved in bacteria (DUF2141) (Length=110)
VAVDGLADDKGQVIAALYDNPFSFPFDHTTAKRLFTADISGRSSRVVFKDIPYGRYAVLIAHDRDFSNTMKFRARFPVEG
YGTSNNYDAGLAGLSFDASSFMFSSTEETI
541 PF17154
(GAPES3)
click to view
Estimated TM-score=0.82;
easy target.
>Gammaproteobacterial periplasmic sensor domain (Length=121)
QQRKDDYAKQLESIAYSVRQPLSEAILSVDIPQAKNILNNLLPIGILSRADVILPNQIQVLHASFPTERPVPRWAKRIFA
LPVQITVPLYSLERVSANPQPLAHLVLQVDSYRMYQFILST
542 PF10649
(DUF2478)
click to view
Estimated TM-score=0.82;
easy target.
>Protein of unknown function (DUF2478) (Length=159)
LAAVLYGPGDDADTLLDDFVQGLQQRGVRVGGIVQRNTRDEVGRKSGMDVIDLTNGDTISICQDLGSGSTACKLDAAGLA
EAGMAVHRAIAAHADLIVINKFSKQEASGSGLRGELADAITSGIPVLTAVPQKCMSDWRDFTGDFGTLLPPSRSAMDAW
543 PF14220
(DUF4329)
click to view
Estimated TM-score=0.82;
easy target.
>Domain of unknown function (DUF4329) (Length=115)
EFMMGLMEAMNQLSVRFNREVCGFVLVDDAGNFSSTKVSWGGHASCASLPLQQGATVVSSWHTHAAWARQYDNEVPSIQD
VEGDMRMGVNGWVGTPGGRLWFVHGRSGTIRQVCG
544 PF14007
(YtpI)
click to view
Estimated TM-score=0.82;
easy target.
>YtpI-like protein (Length=86)
VILIIFSLSFYAYYKMKYFRSQRPLERRWLSAKSSIALGLFVFFFGINQFFLHSSTVTYIVGIIFLLVGGGSAWAGYRSY
KHYLPL
545 PF11150
(DUF2927)
click to view
Estimated TM-score=0.82;
easy target.
>Protein of unknown function (DUF2927) (Length=214)
DDLVRNFERIAFFDEYSRGGRGGGTLSRWEVPVRVGIEFGPSVPPAQRNKDDADIRAYVARLARITGHPISVTDRRTNFH
VFVAGEDDRDFVQNRMRQLVSGVSDSELSLFRDLPRSFYCFVVAVSDRRNPNAYVHAAALIRAEHPDLVHLSCIHEELAQ
GLGLPNDSPQVRPSIFNDDDEFALLTTHDEMLLRMLYDPRLSPGMTAEQARPVA
546 PF11687
(DUF3284)
click to view
Estimated TM-score=0.82;
easy target.
>Domain of unknown function (DUF3284) (Length=119)
MKIEKTLNVPSPVFFDKIIDSVIFDIRKATGKTVSRKQLAGYEYVKEFSASSRAKIKIEEVIENQVYQFRTETTKNEFVV
RYELETINEKQTKVIYTETMKSFGILQQMNDMLLGTILG
547 PF04789
(DUF621)
click to view
Estimated TM-score=0.82;
easy target.
>Protein of unknown function (DUF621) (Length=297)
AEIPPEDKDGVYYFIVTLFVFATFASTLMTGAFLAMSIMKFFWFLAQLTIAVFIMSSLNFLINVPATLFSLITKEFVKSD
AFFLMSNVIDFCHNAVLFANLLISIHRFSVFFFVKITGKLFEKPLVYIWMILVWILSGAVVLCMMSKNCRYEYDMAVFEH
YVLKCRTESGIAISPSSVIQMIEIAMQFVIPIFILAVYIALVAKICTIKQGTQNNYELTILKQAVFIFALFQISSIVFLL
CQTLKFKVATAFLIKRVTNTTEIFAGAATPCFFFFTSKDIRKLVTVKVSATSSQNNS
548 PF09923
(DUF2155)
click to view
Estimated TM-score=0.82;
very hard target.
>Uncharacterized protein conserved in bacteria (DUF2155) (Length=92)
AVFRGLDKITGRIITFDVRIDETVQFGALQVTPRVCNTRPPTEPEQTTAFVEIDEITLSNEVQRIFTGWMFASSPGLHAV
EHPVYDVWLVNC
549 PF07310
(PAS_5)
click to view
Estimated TM-score=0.82;
easy target.
>PAS domain (Length=136)
MKHPSNRELFAYWNDRRGHAKAPERSEFEPSAVRELLGDIFVLSCDAELGFPFRMAGTRLCALLGGDVKDKSFPAQFTPA
SRREIEEIVTVVSEETLPAIAGVKAQAPDRTTASFELLLLPFATRAHEPISLTGLL
550 PF14114
(DUF4286)
click to view
Estimated TM-score=0.82;
easy target.
>Domain of unknown function (DUF4286) (Length=97)
LYNVTINIDESVHQQWLQWMQEKHIQDVLATGKFSSARLIKVLVDEEMGGTTYSVQYTTDSKETLQKYYTEDAPRLREEG
LKLFGDKMLAFRTELEV
551 PF13562
(NTP_transf_4)
click to view
Estimated TM-score=0.82;
hard target.
>Sugar nucleotidyl transferase (Length=150)
YILFDGPVRKALLPFTFTRPVADLRIGILTIREKWEKYLGYTTTTITEDYLSEKYPMVEMEENILINASFLPNEVLVEMI
KSLEKNQAIFKGEEVVAFYTNDTQEEVDFDTYEIIDYNEEGLRIEHTWDIFSKNDAAIREDFELLTEGRT
552 PF10783
(DUF2599)
click to view
Estimated TM-score=0.82;
hard target.
>Protein of unknown function (DUF2599) (Length=98)
IDHTSWVQWGDLKSLRVYPTPAGRAQAATPGTQAQQDQAWAEVLTLSPEADIPGMQAQFNCHWQFAEFIEPGKTSWNLEP
WRPVVSDAELVAAGCNPG
553 PF16828
(GAGBD)
click to view
Estimated TM-score=0.82;
trivial target.
>GAG-binding domain on surface antigen (Length=145)
KKTPLQHLKELVEELKTDLEKLKEYPEYDSTKYPVQKMLWDDNLSFGEREMGRVSSLKEEDSAVSEIPQRLFDFRNHIIW
ERLTRQVDQYRKKYPDNKEIEEEYKQHLEQTDSKNYASQEASNLQASVNEAEQAFEKIKEIAKEI
554 PF13030
(DUF3891)
click to view
Estimated TM-score=0.82;
very hard target.
>Protein of unknown function (DUF3891) (Length=214)
MIVNATPTGWEVIYHRSHALLAAQIAGQWQRKNAPARIYETLAAISHHDDLEKEWEENNLTQAGAPMDFMMNKEASVEKL
ASLIKNARYRGRWVTLLISMHISRLTEPKRGQSAELDAFLDEQIENQRRWREELGIEKDEVDAAYAFMQWCDRLSLILCQ
KELPADERFLEISKGPDGQRYDIMQRSDNLVTVKPWPFEDDKFTVNVEACDLQQ
555 PF06956
(RtcR)
click to view
Estimated TM-score=0.82;
easy target.
>Regulator of RNA terminal phosphate cyclase (Length=184)
KRSVVIGFLGTQLDYGGKGSARWEKWRPTVALCQQEELIVHRLELLHDARSRGLAESVQADIQSISPETEVCRVEIELRD
PWDFEEVYTTLHDFARAYPFDPENEDYLLHITTGTHVAQICWFLLAEARYLPARLLQTSPARKKEVANTAGSYEIIDLDL
SRYNKIAQRFQRERADTVSFLKSG
556 PF08859
(DGC)
click to view
Estimated TM-score=0.82;
easy target.
>DGC domain (Length=105)
IFPCSGASNVGQLANQAAIEMTKNGKGNMMCTVGIGGRIAGLMKSAEGADEVVAIDGCPLNCAKKTLENAGIDVNEHVII
TELGIKKNKDLDLKQEQVNEVLEKI
557 PF17741
(DUF5578)
click to view
Estimated TM-score=0.82;
easy target.
>Family of unknown function (DUF5578) (Length=268)
MTSAKEQAAIGRLLAFLQEWDNAGRAARSRILDNFIEANQGKTGPELELEFSQGASLFLARLTAWLRLSYMNGTCLDQLL
KAIGIFLSAASGHRYLIEFLEVGGVLTLLEILGLSQLKEEDKKESIKLLQLVANAGRKYKELICESYGVRSIAEFMASSK
SEKTQRQVQILLDSLGHGNPKYQNQVYKGLIALLPCTSPHAQQLSLQTLRVVQAIVGKSHPSIVEAVLGVLRSMELEVQY
EAIQLIKDLTSYDVRPALLRGLVALLKP
558 PF04664
(OGFr_N)
click to view
Estimated TM-score=0.82;
hard target.
>Opioid growth factor receptor (OGFr) conserved region (Length=206)
KGDMTNLCFYKNEICFQPNGLYIEEILHNWKDNYVVLEENHSYIQWLFPLREPGVNRHAKPLTLKEVEAFKSSQEVKERL
VRAYELMLGFYGIQLEDRDTGAVCCAQNFQPRFQNLNSHRHNNLRITRILKSLGELGLEHYQAPLICFFLEETLVQHQLP
SVRQSVLDYFMFAVRCRHQRRELVYFAWEHFRPRCQFVCWPRDKLQ
559 PF15569
(Imm40)
click to view
Estimated TM-score=0.82;
easy target.
>Immunity protein 40 (Length=93)
LLSELGTQEYALDQQDAMNAIVIIEDLAIPILGGDVYLQSLEGIEISYENWSINRQPGESLDNYVRRSCAYTRNYIARFP
VQAEKLPLFVLVL
560 PF11249
(DUF3047)
click to view
Estimated TM-score=0.82;
easy target.
>Protein of unknown function (DUF3047) (Length=197)
DGWEALEFPGIDSHTRYELVTEDGTRVVRAEADASASGLISRLSVDPGDSLILRWRWKVANVYEKGDARTKAGDDYPARI
YVAFEFQPDKAGFFERAKRKTVKVLFGEELPGNALNYIWANTLPVGSVVPNAFTDQTMMIAVNSGADQAGEWVTVERDIV
ADYREAFGEEPPRIVGVAIMTDADNTGESATAWYGDV
561 PF04893
(Yip1)
click to view
Estimated TM-score=0.82;
hard target.
>Yip1 domain (Length=167)
LFTHPDEEWREIKGEDESIGHMYLTHVLVLAAIPVVSAYIGTTQVGWYIGTEEAVKLTQASALSMTLLSYLAMLAGVAVM
GAFIHWMARTYDSTPTFNDCVVFAAYTATPLFIAGLAALYPSLWLGMLVGTAAVAYTVYLLYQGIPIFMDIPRDEGFLFS
SSILAVG
562 PF14137
(DUF4304)
click to view
Estimated TM-score=0.82;
hard target.
>Domain of unknown function (DUF4304) (Length=119)
LAPLLKNNGFKKKARNFYREYSDRVEVINVQASQWNEGNEGKFTINVGVYYPEISKILEAPPVSGAPKEYDCTVRERIGL
LTPENKDHWWHIDGSVNDLEVAENVANQVEKICFPWLSE
563 PF08622
(Svf1)
click to view
Estimated TM-score=0.82;
easy target.
>Svf1-like N-terminal lipocalin domain (Length=161)
VETQTFYFTDLNTGYTGFAQVIHSNLMGVHTTAQFTFRLFNNKDPKDSNITWTSTKLEEFRTEGSNFYAKDLSIELNEEN
NLYTLKSAVNKDSIVELTVSKLVPGVIFGKDGFTYYGDDLANPWGSMRHLFWPRCSVKGSIKLQNSTIDINGYTMFVMAL
Q
564 PF12599
(DUF3768)
click to view
Estimated TM-score=0.82;
hard target.
>Protein of unknown function (DUF3768) (Length=83)
MTQGIQALPQEVIQKVIDAVKAFDDFTPDNDPHGEHDFGSVRIGENAIFWKIDYYDRSMEAGSPDPADPEVTTRVLTIML
ADE
565 PF13330
(Mucin2_WxxW)
click to view
Estimated TM-score=0.82;
trivial target.
>Mucin-2 protein WxxW repeating region (Length=87)
WSEWYDGSLQTPGYDGGDFETFDDLRAKGYEVCKAPRAVQCRAEKFPNIPLKDLNQKVECSTTAGLICYNKDQISTMCNN
YEIRILC
566 PF10022
(DUF2264)
click to view
Estimated TM-score=0.82;
easy target.
>Uncharacterized protein conserved in bacteria (DUF2264) (Length=350)
TRSDFQDGCVALLDPLVPHFTPGSSRVKIGTSTTRFDEGAAQIEGFARPLWGLGALLAGGYEYSEAERWRQGIINGTDPE
HPEFWGEIEDLDQRMVEMCPIGFALAVAPDELWNPLTDKQKDNVAKWLGSINEREMPNTNWLWFRVFANLGLRKNGAAYS
LKRIEADMDHLDTFHVGGGWSNDGPKSHHQMDYYSGSFAIQFLQLLYSKLAGDFDPERAERYRNRAKEFAKDFVHYFDKD
GRAIPFGRSVTYRFAMAGFWGAVAFADVELPAPLTWGVVKGLLLRNFRWWATQEDIFNSDGTLTLGYCYANMYLTENYNS
PGSPYWCCLSFTPLALPESHPFWAAAEEPY
567 PF10551
(MULE)
click to view
Estimated TM-score=0.82;
trivial target.
>MULE transposase domain (Length=95)
VISFDTTYNTNRYNLVCGSFIGVNHHGQSTLLGCSLMKNEEIESFKWLFQCWLRCMGGNAPKGFLTDQCASMKRGLEACM
PTTIHHWCIWHIMKK
568 PF06395
(CDC24)
click to view
Estimated TM-score=0.82;
trivial target.
>CDC24 Calponin (Length=87)
DPVTQLSQLFQQGSPLCIIFNAVKPQHKLPVVSSDDLKICKKSIYDFILACKQHFSFTDEELFTISDVFSNSTNNFIKVL
DVVTTLL
569 PF04535
(DUF588)
click to view
Estimated TM-score=0.82;
hard target.
>Domain of unknown function (DUF588) (Length=146)
KGVAIMDFILRLGAIAAALGAAATMGTSDQTLPFFTQFFQFEASYDSFTTFQFFVITMALVGGYLVLSLPFSVVAIVRPH
AVGPRLFLIILDTVFLTLATASGASAAAIVYLAHNGDQDTNWLAICNQFGDFCAQTSSAVVSSLVA
570 PF18775
(APOBEC4)
click to view
Estimated TM-score=0.82;
trivial target.
>APOBEC4 (Length=75)
VTFYMSWSPCSECAEELTTFLAGHRNVTLTIFFSKLYYCDPDSSNREGLKTLAAGGARLFVMFDTDFSYCWTNFV
571 PF04473
(DUF553)
click to view
Estimated TM-score=0.82;
easy target.
>Transglutaminase-like domain (Length=156)
KLRTVTKDFTKYSTTLDKAWAILEWIDENIEYEYTKADYVDALVYNWSKLTSEQKELYDNLTRLYAPNDIIVYKKGICGD
YAILTAAMLLDSGVSPVYLLDISFENSKVGHAAVAVKIEGELFVLDQHLPPIPIGNYYWTWAIKNNSKIIANITFY
572 PF01827
(FTH)
click to view
Estimated TM-score=0.82;
easy target.
>FTH domain (Length=133)
LEDTRAATGTKSLLKKKSLTLRNLMAPDVFSILPYFDSNCMENIHLTGEYEEAQPLNGIVELPLWNHLKNVTLDHFFIGN
IPQNITHLETFTGNVREITAEDVIQIKNMMLRSGQLKCCYMSSNWNQDESFQQ
573 PF08480
(Disaggr_assoc)
click to view
Estimated TM-score=0.82;
easy target.
>Disaggregatase related (Length=202)
MDDVEIYNNLFHNTYGPGIALVGYNNGGGIYPLTEACNIYIHNNIFYDCASQQTYNWMGGVTACGFDNVVIENNTFDGCY
NVGVFVHQPTVGVSAPGTGYRIYAKNNIIANTRLRAYDPSGTGNGVQNDMPTTHTLTSEYNCFHGNAGSNYKNVTASSTD
LSSDPLFYDQPNRDYHLKSLYGRWNGSSWETDTVHSPCIDAG
574 PF12673
(DUF3794)
click to view
Estimated TM-score=0.82;
hard target.
>Domain of unknown function (DUF3794) (Length=78)
QKIKDIDAEIRDITFEIINDKIIIQGIIHKQIFFVGTDNVVHHQTEEMPFSTFIDVPGAEPGMDAQIHPEIEHVAFEL
575 PF09931
(DUF2163)
click to view
Estimated TM-score=0.82;
trivial target.
>Uncharacterized conserved protein (DUF2163) (Length=163)
MKTLPAGMQAHLDTGTTTLAWCWKLTRTDAQVMGFTDHDRPIQFDGVIYEAASGFSASEIASSLGLSVDNLDVDGALSSA
AITEADIRAGLYDGAEVEIWRVNWADPDQRVLMRRGTIGEVIRGELAFTAELRGLAQALDQTQGRTYQRICDADLGDARC
KVD
576 PF13020
(DUF3883)
click to view
Estimated TM-score=0.82;
easy target.
>Domain of unknown function (DUF3883) (Length=91)
GEEYVYQQLCRSLGEQEGVQVKWVNETEESGLPYDITVRSGASQDIEYIEVKSTRTMEKGVFEISMNELDTAGMHGSRYS
IYRVFNAGNAA
577 PF04479
(RTA1)
click to view
Estimated TM-score=0.82;
hard target.
>RTA1 like protein (Length=207)
VEVIGYVGRCVSSKESPNWTLGPYIIQAILLLVAPALFAATIYMELGRIMILVRGEDRAVIRRTWLTKAFVGGDILSFFL
QGGGGGYQASGTLEALKTGSDIIIAGLFVQLLFFGVFLVVSVLFHRSIIRIPTSQSANPNVPWKRHLKVLYLTGTLIMVR
SIFRAVEYLQGFNGYLLRHEAYLYVFDAALMFLVMIIFNFIHPGEIM
578 PF05339
(DUF739)
click to view
Estimated TM-score=0.82;
trivial target.
>Protein of unknown function (DUF739) (Length=69)
MCYDYSRLSGKIVEKYGTQYNFAIAMKLSERSLSLKLNGKVGWKDSEIWKAIQLLDIPVEKIHLYFFKE
579 PF18143
(HAD_SAK_2)
click to view
Estimated TM-score=0.82;
easy target.
>HAD domain in Swiss Army Knife RNA repair proteins (Length=132)
YIFLDIDGVLHPATAGTDRQFSPNCLRALRTIVGATGAALILSSSWQSSQAAAEVVDEELARWGLPRCSGRTSAGPTGVG
AAARAGEILAWLAAKTEVEAWVALDDLPLLAHRSYGRFVQTDPAVGLTEADA
580 PF18855
(baeRF_family11)
click to view
Estimated TM-score=0.82;
easy target.
>Bacterial archaeo-eukaryotic release factor family 11 (Length=138)
QTAFVLALSQNAARLVEIVPDTAAETIKVPDLPTDAASHVGKSSIKDRAPSRRLQGSEGQKVRLRQYARGVDQALRPLLT
GSGIPLILATTQPLDGIYRSVNSYPGLAPRSIEGNPEELSDQQLAEAARPILDEIYAE
581 PF07260
(ANKH)
click to view
Estimated TM-score=0.81;
easy target.
>Progressive ankylosis protein (ANKH) (Length=314)
RALNRGIAAVKEDAVEMLASYGLAYSLMKFFTGPMSDFKNVGLVFVNSKRDRTKAVLCMVVAGAIAAVFHTLIAYSDLGY
YIINKLHHVDESVGSKTRRAFLYLAAFPFMDAMAWTHAGILLKHKYSFLVGCASISDVIAQVVFVAILLHSHLECREPLL
IPILSLYMGALVRCTTLCLGYYKNIHDIIPDRSGPELGGDATIRKMLSFWWPLALILATQRISRPIVNLFVSRDLGGSSA
ATEAVAILTATYPVGHMPYGWLTEIRAVYPAFDKNNPSNKVVSTNNTVTSAHIKKFTFVCMALSLTLCFVMFWT
582 PF13515
(FUSC_2)
click to view
Estimated TM-score=0.81;
hard target.
>Fusaric acid resistance protein-like (Length=125)
AIFISLAFNIQKSYWIPLTAHTVLLGMTTRRMLDRSVARGLGTILGTLVLSAILYFNPHLIIAVIIMGIAAMVTETFVGS
NYAFAVIFITIQVILLNGLASDNLSISIAYTRIFDVLIGIVIAVI
583 PF14281
(PDDEXK_4)
click to view
Estimated TM-score=0.81;
easy target.
>PD-(D/E)XK nuclease superfamily (Length=167)
FNIFHILGVSHYENTHSTILAELLNPEGTHGLHNSFLKLFLDINQIEGFDSRNALVRTEVAVSEYGRIDILIESSNWAVI
IENKFYAKDQPEQLKRYNEYAIGKYGVGNYMILYLTPDGRYASDDSGRGVDYRCISYKKTIIEWLGQCVGIAVHRPLVRE
TINQYIN
584 PF17918
(TetR_C_15)
click to view
Estimated TM-score=0.81;
trivial target.
>Tetracyclin repressor-like, C-terminal domain (Length=110)
PIAEAARELVKMMIDVHRMDPKLHRVLVEQTPRVGNLDRVNDMGEEATTLVRAYLEVHKDEIDVEDLDLAAWICVSCVEA
LTHIAVLRRPNLLDDDRFIDEVANVVVRYL
585 PF14338
(Mrr_N)
click to view
Estimated TM-score=0.81;
easy target.
>Mrr N-terminal domain (Length=86)
YQEFMLPFLRTLGDGQEHKLREIYKLLASESNLTEEEMEQKLPSGKQLVFHNRIGWARTYLKKAGLIDAPQRGVFTITQR
GRDLLK
586 PF16431
(DUF5028)
click to view
Estimated TM-score=0.81;
easy target.
>Domain of unknown function (DUF5028) (Length=166)
VKTYYMNENVPYEDDYFRRADNILNGYSATVLGYEIIPYDEYAEKYNIDLPEIETDEAGNTIYRPEYVYDVEIKFVNTDN
EDGTIDMFDTLLVNGKELMLRADEYLWDEMYPQLAGSYSFRLRTNTEKVFHIPFVVESVYSKRYPIEKIKKQNMSIVISQ
YPEKKV
587 PF07076
(DUF1344)
click to view
Estimated TM-score=0.81;
trivial target.
>Protein of unknown function (DUF1344) (Length=60)
AGQTEGLIKKVDKDALTLTLDDGKSYKLNAETDLDALKPGMDIVIAYDVTDGENVVTDMQ
588 PF10081
(Abhydrolase_9)
click to view
Estimated TM-score=0.81;
hard target.
>Alpha/beta-hydrolase family (Length=288)
IRVYVGLDTAPTPEERIDLVLAELERTGAFDRSTLVLIPTTGTGWVNPTAARAMELVHNGDLAMVAWQYSYLPSWISFLA
DREKAAAAGKMLVERVHERWSQLPEDDRPDLFLYGESLGTQSGEGAFDSLAEIRAQMDGVLWVGPPNSNRLWRQLVERRD
PGTTEVQPVYADGLVVRFADSREAIHEPETPWLSPRVLYIQHASDPVVWWSPDLLFSRPDWLSEPPGRDRLPQMRWFPFV
TFWQVSADLTNAAGVPDGHGHNYGSAVLEGWIAVTQPEGWTENDTERV
589 PF18593
(CdiI_2)
click to view
Estimated TM-score=0.81;
trivial target.
>CdiI immunity protein (Length=89)
RYPRMYQFFGAYFNQDFDMWGNTIPEIVSCYASNCPWASHIELINEIDAFVREHPTDLDAAFAKDYGAGFDPKLWGHTVR
SFLEELKGL
590 PF09723
(Zn-ribbon_8)
click to view
Estimated TM-score=0.81;
easy target.
>Zinc ribbon domain (Length=40)
MPTYDYRCGKCGHQFEVFQSITDNPLTECPSCGGSVERLI
591 PF14428
(SCP1201-deam)
click to view
Estimated TM-score=0.81;
easy target.
>SCP1.201-like deaminase (Length=135)
APVPSWIRQTGQDLPTRPDDHGPTHGQAFDSTGRPLSAEPWRSGRNIASTSDLRPIPGLKGFPWTLTDHVESRAAQQMRR
PGAPREVSLVVNKEPCTDDPYGCDRILRHIIPAGSRLTIYVRDPDAPAGVRTVGQ
592 PF16170
(DUF4873)
click to view
Estimated TM-score=0.81;
hard target.
>Domain of unknown function (DUF4873) (Length=91)
EDGYVGTATLVVDETELTVEVQLRGHFQPIDGYYRWYGRIKANEQLTALAGGKKKKAEIRTPDGTATGEISDPDPWDRYR
IMGTSTPPFHV
593 PF09951
(DUF2185)
click to view
Estimated TM-score=0.81;
very hard target.
>Protein of unknown function (DUF2185) (Length=84)
CIATDKITVEGFKIGYMYREKPNPKYPDSGWRFFQGEESDEYIKDVKNSGIYDLNTICNYDPSIIPLLKSPYGVCYYRDK
MGTF
594 PF17149
(CHASE5)
click to view
Estimated TM-score=0.81;
easy target.
>Periplasmic sensor domain found in signal transduction proteins (Length=107)
DYNREFNNVQARHDEIQTIHAELLASSLWNYDLVVLTQRLEGLVNLPNVDYMKITSGDYHFSAGEPVTSMALNSEIALEY
TNPDTQVTENIGTLYVESDAQGIYNYL
595 PF07617
(DUF1579)
click to view
Estimated TM-score=0.81;
easy target.
>Protein of unknown function (DUF1579) (Length=155)
QPQKEHQWLQKLVGEWTYEIEAMMAPDQPPVKSTGTETVRSLGGLWILAEGQGEMGGCGSATTLMTLGYDPQKQRYVGTW
IGSMMTYLWIYDGELDASETALTLNSDGPVMTGEEKLGKYKDVIEFKSDDHRVLTSHMLSDDGQWQQFMTAHYRR
596 PF11316
(Rhamno_transf)
click to view
Estimated TM-score=0.81;
easy target.
>Putative rhamnosyl transferase (Length=234)
QVIGLCRFSYPAIGGFQIEHQSHAERIAFLYDDARLQERFRLFETVALPSLRAQTDQDFDLVIVIGSCLPARHEARLRDL
ISGMPQARIEQHPPRRQREIMKDVLNRARRDPTAPCLQFRFDDDDAVSVDFVERLRSTIADCPGLVARHKSVAVDFNMGY
VAEFGAEGIKAAEVHSPYNVAALGMYVRGGARVTIMNFAHHKILRFMPTVTLSDAPMFVRGWHGSNDSRQKPVK
597 PF09650
(PHA_gran_rgn)
click to view
Estimated TM-score=0.81;
hard target.
>Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) (Length=87)
IHIERPHSLGLDAARAKAEKLAERLAKEHGVQCEWQGDELTFKRSGVDGRIAVGADKVTVDVKLGLMLSAMSGLLKGEIE
KALDKAL
598 PF10127
(RlaP)
click to view
Estimated TM-score=0.81;
easy target.
>RNA repair pathway DNA polymerase beta family (Length=248)
MKQRIIDELKRIEQSYGVKIVYAVESGSRAWGFPSQDSDYDVRFIYVPKKEWYFSIEQERDVIEEPIHDLLDISGWELRK
TLRLFKKSNPPLLEWLSSDIVYYEAFTTAEQLRKLRTEAFKPEASAYHYINMARRNVKDYLQGQEVKIKKYFYVLRPILA
CQWIEKHGTIPPMDFTVLMNELVAEPELKAEMETLLERKRRGEELDLEARIDVIHQFIETEIERIMEAAKELKAEKKDMT
SELNRLLL
599 PF04093
(MreD)
click to view
Estimated TM-score=0.81;
easy target.
>rod shape-determining protein MreD (Length=152)
KRFILQWLILICTFIVALVMEIAPWPTDFQNFKPAWLVLVLLYWTLALPNKVSIGSAFVLGVIWDLVLGSILGVHALVLS
LFTYLVALNHLVLRNLSLWMQSLLVIVFVFSIRFSIFLIELLLHSASFNWQESYGALASGLLWPWVFLLLRK
600 PF12085
(DUF3562)
click to view
Estimated TM-score=0.81;
trivial target.
>Protein of unknown function (DUF3562) (Length=59)
EDSQKIVHEIAESTDAPEEVVSQMYTDAVQAYERDARILDYVPLFAAKRVRETLRSRTA

Search by Pfam ID:
Go to page (83 pages in total): [First page] << < 1 2 3 4 5 6 7 8 9 10 11 > >> [Last page] [All entries in one page].

Bulk download:

[Back to server]

[an error occurred while processing this directive]

yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218