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BioLiP

PDB CCD ID: XRE
Number of entries in BioLiP: 0
Chemical formula: C5 H9 N O3
InChI: InChI=1S/C5H9NO3/c7-4-2-1-3(6-4)5(8)9/h3-4,6-7H,1-2H2,(H,8,9)/t3-,4-/m0/s1
InChIKey: KYBXNPIASYUWLN-IMJSIDKUSA-N
SMILES:
SoftwareSMILES
CACTVS 3.385O[C@H]1CC[C@H](N1)C(O)=O
OpenEye OEToolkits 2.0.7C1CC(NC1C(=O)O)O
OpenEye OEToolkits 2.0.7C1C[C@@H](N[C@@H]1C(=O)O)O
CACTVS 3.385O[CH]1CC[CH](N1)C(O)=O
Name:5-hydroxyproline;
(2~{S},5~{S})-5-oxidanylpyrrolidine-2-carboxylic acid
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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