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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP

PDB CCD ID: XFG
Number of entries in BioLiP: 6
Chemical formula: C8 H18 B N2 O5
InChI: InChI=1S/C8H18BN2O5/c10-6-4-11-7(8(12)13)5(6)2-1-3-9(14,15)16/h5-7,11,14-16H,1-4,10H2,(H,12,13)/q-1/t5-,6+,7+/m1/s1
InChIKey: LCXKCSYMGHLIAH-VQVTYTSYSA-N
SMILES:
SoftwareSMILES
CACTVS 3.385N[C@H]1CN[C@@H]([C@@H]1CCC[B-](O)(O)O)C(O)=O
ACDLabs 12.01N1CC(C(C1C(O)=O)CCC[B-](O)(O)O)N
OpenEye OEToolkits 2.0.7[B-](CCCC1C(CNC1C(=O)O)N)(O)(O)O
CACTVS 3.385N[CH]1CN[CH]([CH]1CCC[B-](O)(O)O)C(O)=O
OpenEye OEToolkits 2.0.7[B-](CCC[C@@H]1[C@H](CN[C@@H]1C(=O)O)N)(O)(O)O
Name:3-[(2~{S},3~{R},4~{R})-4-azanyl-2-carboxy-pyrrolidin-3-yl]propyl-$l^{3}-oxidanyl-bis(oxidanyl)boron

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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