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BioLiP

PDB CCD ID: A1H3G
Number of entries in BioLiP: 0
Chemical formula: C10 H15 N5 O6 P
InChI: InChI=1S/C10H14N5O6P/c11-9-8-10(13-3-12-9)15(4-14-8)7-1-5(16)6(21-7)2-20-22(17,18)19/h3-7,16H,1-2H2,(H2,11,12,13)(H2,17,18,19)/p+1/t5-,6+,7+/m0/s1
InChIKey: KHWCHTKSEGGWEX-RRKCRQDMSA-O
SMILES:
SoftwareSMILES
CACTVS 3.385Nc1[nH+]cnc2n(cnc12)[C@H]3C[C@H](O)[C@@H](CO[P](O)(O)=O)O3
CACTVS 3.385Nc1[nH+]cnc2n(cnc12)[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3
OpenEye OEToolkits 2.0.7c1[nH+]c(c2c(n1)n(cn2)[C@H]3C[C@@H]([C@H](O3)COP(=O)(O)O)O)N
OpenEye OEToolkits 2.0.7c1[nH+]c(c2c(n1)n(cn2)C3CC(C(O3)COP(=O)(O)O)O)N
Name:2'-DEOXYADENOSINE-5'-MONOPHOSPHATE (protonated at N1)
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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