Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
>protein
SAPANAVAADDATAIALKYNQDATKSERVAAARPGLPPEEQHCANCQFMQADAAGATDEWKGCQLFPGKLINVNGWCASW
TLKAG

The query sequence (length=85) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 1js2:A 89 85 0.9882 0.9438 0.9882 4.55e-58 3a38:A, 3a39:A, 6aiq:A, 6air:A, 2ams:A, 1b0y:A, 7c52:b, 1cku:A, 1cku:B, 5d8v:A, 1eyt:A, 2fla:A, 1hip:A, 1hrq:A, 1hrr:A, 1iua:A, 1js2:B, 1js2:C, 1js2:D, 1neh:A, 1noe:A, 7vos:A, 5wqq:A, 5wqr:A
2 3hip:A 82 83 0.7294 0.7561 0.7470 3.32e-42 3hip:B, 3hip:C
3 1hpi:A 71 77 0.3294 0.3944 0.3636 1.53e-10
4 1hlq:A 75 78 0.3176 0.3600 0.3462 2.06e-07 1hlq:B, 1hlq:C
5 3h31:A 74 48 0.2471 0.2838 0.4375 1.08e-04
6 7oso:A 412 19 0.1176 0.0243 0.5263 0.39 4d47:A, 4d47:B, 4d47:C, 4d47:D, 4d47:E, 4d47:F, 4d47:G, 4d47:H, 6frw:A, 6rv5:A
7 4eb5:C 138 45 0.2000 0.1232 0.3778 0.65 4eb5:D, 4eb7:C
8 6blk:C 158 37 0.1412 0.0759 0.3243 1.2 6blk:D, 6blk:A, 6blk:B
9 6z1p:Av 206 35 0.1294 0.0534 0.3143 1.5
10 7z20:t 101 83 0.2706 0.2277 0.2771 1.6 8a3l:s, 7abz:T, 7ac7:T, 7acj:T, 7acr:T, 5ady:T, 5afi:T, 8akn:s, 8am9:s, 8ana:s, 8ap4:s, 9ax7:s, 9ax8:T, 8aye:s, 8b0x:s, 7b5k:T, 8b7y:b, 8bf7:Q, 8bge:Q, 8bgh:Q, 8bh4:Q, 8bhj:Q, 8bhl:Q, 8bhn:Q, 8bhp:Q, 8bil:Q, 8bim:Q, 7bl2:T, 7bl3:T, 7bl4:T, 7bl5:T, 7bl6:T, 6bu8:22, 7bv8:U, 6by1:CT, 6by1:DT, 6c4i:U, 8c8x:T, 8c8y:T, 8c8z:T, 8c90:T, 8c91:T, 8c92:T, 8c93:T, 8c97:T, 8c98:T, 8cam:s, 8ceu:s, 8cgd:s, 8cgk:s, 8cgv:s, 9cg5:s, 9cg6:s, 9cg7:s, 9cl9:T, 7cpj:T, 4csu:T, 7d6z:Z, 7d80:W, 6dnc:X, 8eiu:s, 8ekc:V, 8emm:s, 6enf:T, 6enj:T, 6enu:T, 9fbv:s, 8fiz:DA, 8fto:s, 8fzd:V, 8fze:V, 8fzf:V, 8fzg:V, 8fzh:V, 8fzi:V, 8fzj:V, 8g2u:T, 8g31:T, 8g34:T, 8g38:T, 8g6w:s, 8g6x:s, 8g6y:s, 8g7p:V, 8g7q:V, 8g7r:V, 8g7s:V, 5gad:U, 5gae:U, 5gaf:U, 5gag:U, 5gah:U, 6gbz:T, 6gc0:T, 6gc4:T, 6gc6:T, 6gc7:T, 6gc8:T, 6gwt:T, 6gxm:T, 6gxn:T, 6gxo:T, 6gxp:T, 6h4n:T, 5h5u:U, 6h58:T, 6h58:TT, 6hrm:T, 8hsp:s, 8htz:s, 8hu1:s, 6i0y:T, 6i7v:DU, 6i7v:CU, 8ifb:s, 8ifc:s, 5iqr:T, 5it8:CU, 5it8:DU, 8j1z:s, 3j5l:T, 5j5b:CU, 5j5b:DU, 3j7z:T, 5j7l:CU, 5j7l:DU, 3j8g:T, 5j88:CU, 5j88:DU, 5j8a:CU, 5j8a:DU, 3j9y:T, 5j91:CU, 5j91:DU, 3jbu:t, 3jbv:t, 3jcd:T, 3jce:T, 3jcj:S, 3jcn:T, 5jc9:CU, 5jc9:DU, 7jss:t, 7jsw:t, 7jsz:t, 5jte:BT, 7jt1:t, 7jt2:t, 7jt3:t, 5ju8:BT, 7k00:s, 7k50:t, 7k51:t, 7k52:t, 7k53:t, 7k54:t, 7k55:t, 5kcr:1X, 5kcs:1X, 5kps:T, 5kpv:S, 5kpw:S, 5kpx:S, 5l3p:X, 6lkq:b, 7lv0:t, 7lvk:b, 5lza:T, 5lzb:T, 5lzc:T, 5lzd:T, 5lze:T, 5lzf:T, 7m5d:T, 5mdv:T, 5mdw:T, 5mdy:T, 5mdz:T, 5mgp:T, 7n1p:LW, 7n2c:LW, 7n2u:LW, 7n2v:LW, 7n30:LW, 7n31:LW, 7nbu:s, 5nco:U, 5np6:r, 7nso:T, 7nsp:T, 7nsq:T, 5nwy:g, 7nwt:T, 7nww:S, 7o19:BT, 7o1a:BT, 7o1c:BT, 5o2r:T, 6o9k:T, 7ode:b, 6ofx:t, 6og7:t, 6ogf:t, 6ogg:t, 6ogi:t, 7oif:S, 7oig:S, 7oii:S, 7oiz:s, 7oj0:s, 6om6:T, 6ore:T, 6orl:T, 6osk:T, 6osq:T, 6ost:T, 6ot3:T, 7ot5:S, 7otc:T, 6ouo:T, 8p16:T, 8p17:T, 8p18:T, 7p3k:s, 8peg:w, 8phj:s, 6pj6:b, 7pjs:T, 7pjt:T, 7pju:T, 7pjv:T, 7pjw:T, 7pjx:T, 7pjy:T, 7pjz:T, 8pkl:w, 8pva:s, 7q4k:BT, 8q4f:s, 6q97:T, 6q98:T, 6q9a:T, 8qbt:T, 6qdw:t, 7qg8:g, 7qgh:g, 7qgn:g, 7qgr:g, 8qk7:T, 8qoa:s, 7qq3:b, 6qul:U, 8r6c:s, 8r8m:s, 8rpy:T, 8rpz:T, 8rq0:T, 8rq2:T, 6s0k:U, 7s1g:b, 7s1h:b, 7s1i:b, 7s1j:b, 7s1k:b, 7sa4:T, 7ss9:t, 7ssd:t, 7ssl:t, 7ssn:t, 7sso:t, 7ssw:t, 7st2:t, 7st6:t, 7st7:t, 8syl:V, 6szs:T, 8t5d:T, 8t5h:T, 6tbv:L231, 6tc3:L231, 7tos:L23, 4u1u:BT, 4u1u:DT, 4u1v:BT, 4u1v:DT, 4u20:BT, 4u20:DT, 4u24:BT, 4u24:DT, 4u25:BT, 4u25:DT, 4u26:BT, 4u26:DT, 4u27:BT, 4u27:DT, 5u4i:U, 6u48:CU, 5u9f:22, 5u9g:22, 7ug7:LW, 7uph:s, 8upo:2, 8upr:2, 8uql:2, 8uqm:2, 8uqp:2, 8ur0:2, 8urh:2, 8uri:2, 8urx:2, 8ury:2, 4uy8:T, 5uyk:22, 5uyl:22, 5uym:22, 5uyn:22, 5uyp:22, 5uyq:22, 4v4v:BR, 4v4w:BR, 4v50:BT, 4v50:DT, 4v52:BT, 4v52:DT, 4v53:BT, 4v53:DT, 4v54:BT, 4v54:DT, 4v55:BT, 4v55:DT, 4v56:BT, 4v56:DT, 4v57:BT, 4v57:DT, 4v5h:BT, 4v5y:BT, 4v5y:DT, 4v64:BT, 4v64:DT, 4v69:BT, 4v6c:BT, 4v6c:DT, 4v6d:BT, 4v6d:DT, 4v6e:BT, 4v6e:DT, 4v6t:BT, 4v6y:BT, 4v6z:BT, 4v70:BT, 4v71:BT, 4v72:BT, 4v73:BT, 4v74:BT, 4v75:BT, 4v76:BT, 4v77:BT, 4v78:BT, 4v79:BT, 4v7a:BT, 4v7b:BT, 4v7c:BV, 4v7d:AW, 4v7i:AT, 4v7s:BT, 4v7s:DT, 4v7t:BT, 4v7t:DT, 4v7u:BT, 4v7u:DT, 4v7v:BT, 4v7v:DT, 4v85:BX, 4v89:BX, 4v9c:BT, 4v9c:DT, 4v9d:CT, 4v9d:DT, 4v9o:AT, 4v9o:CT, 4v9o:ET, 4v9o:GT, 4v9p:AT, 4v9p:CT, 4v9p:ET, 4v9p:GT, 8vs9:L23, 8vsa:L23, 6vu3:2, 6vwl:R, 6vwm:R, 6vwn:R, 6vyq:2, 6vyr:2, 6vys:2, 6vyt:2, 6vyu:2, 6vyw:2, 6vyx:2, 6vyy:2, 6vyz:2, 6vz2:2, 6vz3:2, 6vz5:2, 6vz7:2, 6vzj:2, 8w51:U, 5wdt:T, 6wd0:t, 6wd1:t, 6wd2:t, 6wd3:t, 6wd4:t, 6wd5:t, 6wd6:t, 6wd7:t, 6wd8:t, 6wd9:t, 6wda:t, 6wdb:t, 6wdc:t, 6wdd:t, 6wde:t, 6wdf:t, 6wdg:t, 6wdh:t, 6wdi:t, 6wdj:t, 6wdk:t, 6wdl:t, 6wdm:t, 5we4:T, 5we6:T, 4wf1:BT, 4wf1:DT, 5wf0:T, 5wfk:T, 5wfs:T, 6wnt:t, 6wnv:t, 6wnw:t, 4woi:BT, 4woi:CT, 4www:RT, 4www:YT, 6x6t:2, 6x7f:2, 6x7k:2, 6x9q:2, 6xdq:2, 6xdr:2, 6xgf:2, 6xii:2, 6xij:2, 6xz7:T, 6xza:T2, 6xzb:T2, 6y69:T, 7y7c:s, 7y7d:s, 7y7e:s, 7y7f:s, 7y7g:s, 7y7h:s, 4ybb:CU, 4ybb:DU, 7yla:b, 6ys3:t, 6ysr:T, 6yss:T, 6yst:T, 6ysu:T, 7zod:t, 7zp8:t, 6ztj:BU, 6ztl:BU, 6ztm:BU, 6ztn:BU, 6zto:BU, 6ztp:BU, 7zta:L231, 6zu1:BU
11 4fi4:A 407 34 0.1529 0.0319 0.3824 4.9 4fi4:B, 4fi4:C

[Back]

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218