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BioLiP
>protein
ELNISPDEIVSIREQFNMSRGVFARLLHTSSRTLENWEQGRSVPNGQAVTLLKLVQRHPETLSHIAEL

The query sequence (length=68) is searched through a non-redundant set of database sequences protein_nr.fasta.gz clustered at 90% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Homologs
to hit
1 8a0x:A 103 68 1.0000 0.6602 1.0000 1.95e-45 8a0w:A, 8a0w:B, 8a0x:B
2 3gn5:A 132 62 0.2059 0.1061 0.2258 5.15e-05 3ga8:A, 3gn5:B, 3hi2:A, 3hi2:C, 3o9x:A, 3o9x:B
3 3jxb:C 67 57 0.1912 0.1940 0.2281 0.31 3jxb:D, 3jxc:L, 3jxc:R, 3jxd:L, 3jxd:R, 2r1j:L, 2r1j:R
4 8jgw:A 500 44 0.2353 0.0320 0.3636 0.31
5 5my0:A 852 54 0.2206 0.0176 0.2778 0.80 5my0:C, 5my0:D, 5my2:D, 6rop:A, 6rop:C, 6rop:D
6 6rop:B 831 54 0.2206 0.0181 0.2778 0.82
7 4j1x:C 195 42 0.2206 0.0769 0.3571 0.96 2bnm:A, 2bnm:B, 2bnn:A, 2bnn:B, 2bno:A, 2bno:B, 4j1w:A, 4j1w:B, 4j1w:C, 4j1x:A, 4j1x:B, 3scf:A, 3scf:B, 3scf:C, 3scg:A, 3scg:B, 3scg:C, 3sch:A, 3sch:B, 1zz7:A, 1zz7:B, 1zz8:A, 1zz8:B, 1zz8:C, 1zz9:A, 1zz9:B, 1zz9:C, 1zzb:A, 1zzb:B, 1zzc:A, 1zzc:B
8 6q89:A 852 31 0.1765 0.0141 0.3871 2.2 7ntz:A, 7nu3:A, 7nu6:A, 7nu7:A, 7nub:A, 6q8b:A, 6q8c:A
9 7nu2:A 875 31 0.1765 0.0137 0.3871 2.2 7a0p:A, 7ap2:A, 7nty:A, 7nu0:A, 7nu1:A, 7nu4:A, 7nu5:A, 7nu8:A, 7nu9:A, 7nua:A, 7nuc:A, 6q8a:A, 6ykk:A, 6ykl:A, 6ykn:A, 6yko:A, 6ykq:A, 6yks:A, 6ykt:A, 6yku:A, 6ykv:A, 6ykw:A, 6ykx:A, 7yp8:A
10 6dcr:B 600 52 0.2353 0.0267 0.3077 2.4
11 8fak:H 643 52 0.2353 0.0249 0.3077 2.4 2d7g:A, 2d7g:B, 2d7g:C, 2d7g:D, 2d7h:A, 6dcr:A, 2dwl:A, 2dwl:B, 2dwl:C, 2dwl:D, 2dwm:A, 2dwm:C, 2dwm:D, 2dwn:A, 2dwn:C
12 7o81:AU 110 44 0.1765 0.1091 0.2727 3.9 6zvh:i
13 4hjf:A 263 34 0.1176 0.0304 0.2353 4.2 3u2e:A, 3u2e:B
14 2vz9:B 2086 54 0.2206 0.0072 0.2778 4.3 2vz9:A
15 3o3u:N 580 19 0.1324 0.0155 0.4737 4.4 2l7u:A, 7lml:A, 7lml:B, 7lmw:A, 7lmw:B, 2mov:A, 4oi7:A, 4oi8:A, 4oi8:B, 6xq1:A, 6xq1:B, 6xq3:A, 6xq3:B, 6xq5:A, 6xq5:B, 6xq6:A, 6xq6:B, 6xq7:A, 6xq7:B, 6xq8:A, 6xq8:B, 6xq9:A, 6xq9:B
16 2vun:A 385 26 0.1324 0.0234 0.3462 5.7 2vun:B, 2vun:C, 2vun:D
17 6vwp:A 435 38 0.2353 0.0368 0.4211 6.3 6vwo:A, 6vwp:B, 6vwp:C, 6vwp:D, 6vwp:E, 6vwp:F, 6vwp:G, 6vwp:H
18 3j6q:A 1058 30 0.1324 0.0085 0.3000 7.3 3j6q:B, 3j6q:C, 3j6q:D, 3j6q:E, 3jay:A, 3jb0:A, 3jb1:A, 3jb2:A, 3jb3:A, 7whp:A, 7whp:B
19 5a2a:A 452 33 0.1471 0.0221 0.3030 8.9 5a2b:A, 5a2c:A

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Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417