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BioLiP
Download all results in tab-seperated text for 123 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 9evx:A (1.71) BS01 FE2 1.10.3.9 GO:0005506 ... P0A444 38900892
    2 9evx:A (1.71) BS02 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    3 9evx:A (1.71) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    4 9evx:A (1.71) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    5 9evx:A (1.71) BS05 OEX 1.10.3.9 GO:0005506 ... P0A444 38900892
    6 9evx:A (1.71) BS06 PHO 1.10.3.9 GO:0005506 ... P0A444 38900892
    7 9evx:A (1.71) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    8 9evx:A (1.71) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    9 9evx:A (1.71) BS09 PHO 1.10.3.9 GO:0005506 ... P0A444 38900892
    10 9evx:A (1.71) BS10 BCT 1.10.3.9 GO:0005506 ... P0A444 38900892
    11 9evx:B (1.71) BS01 CLA ? GO:0009523 ... Q8DIQ1 38900892
    12 9evx:B (1.71) BS02 CLA ? GO:0009523 ... Q8DIQ1 38900892
    13 9evx:B (1.71) BS03 CLA ? GO:0009523 ... Q8DIQ1 38900892
    14 9evx:B (1.71) BS04 CLA ? GO:0009523 ... Q8DIQ1 38900892
    15 9evx:B (1.71) BS05 CLA ? GO:0009523 ... Q8DIQ1 38900892
    16 9evx:B (1.71) BS06 CLA ? GO:0009523 ... Q8DIQ1 38900892
    17 9evx:B (1.71) BS07 CLA ? GO:0009523 ... Q8DIQ1 38900892
    18 9evx:B (1.71) BS08 CLA ? GO:0009523 ... Q8DIQ1 38900892
    19 9evx:B (1.71) BS09 CLA ? GO:0009523 ... Q8DIQ1 38900892
    20 9evx:B (1.71) BS10 CLA ? GO:0009523 ... Q8DIQ1 38900892
    21 9evx:B (1.71) BS11 CLA ? GO:0009523 ... Q8DIQ1 38900892
    22 9evx:B (1.71) BS12 CLA ? GO:0009523 ... Q8DIQ1 38900892
    23 9evx:B (1.71) BS13 CLA ? GO:0009523 ... Q8DIQ1 38900892
    24 9evx:B (1.71) BS14 CLA ? GO:0009523 ... Q8DIQ1 38900892
    25 9evx:B (1.71) BS15 CLA ? GO:0009523 ... Q8DIQ1 38900892
    26 9evx:B (1.71) BS16 CLA ? GO:0009523 ... Q8DIQ1 38900892
    27 9evx:C (1.71) BS01 OEX ? GO:0005737 ... Q8DIF8 38900892
    28 9evx:C (1.71) BS02 CLA ? GO:0005737 ... Q8DIF8 38900892
    29 9evx:C (1.71) BS03 CLA ? GO:0005737 ... Q8DIF8 38900892
    30 9evx:C (1.71) BS04 CLA ? GO:0005737 ... Q8DIF8 38900892
    31 9evx:C (1.71) BS05 CLA ? GO:0005737 ... Q8DIF8 38900892
    32 9evx:C (1.71) BS06 CLA ? GO:0005737 ... Q8DIF8 38900892
    33 9evx:C (1.71) BS07 CLA ? GO:0005737 ... Q8DIF8 38900892
    34 9evx:C (1.71) BS08 CLA ? GO:0005737 ... Q8DIF8 38900892
    35 9evx:C (1.71) BS09 CLA ? GO:0005737 ... Q8DIF8 38900892
    36 9evx:C (1.71) BS10 CLA ? GO:0005737 ... Q8DIF8 38900892
    37 9evx:C (1.71) BS11 CLA ? GO:0005737 ... Q8DIF8 38900892
    38 9evx:C (1.71) BS12 CLA ? GO:0005737 ... Q8DIF8 38900892
    39 9evx:C (1.71) BS13 CLA ? GO:0005737 ... Q8DIF8 38900892
    40 9evx:C (1.71) BS14 CLA ? GO:0005737 ... Q8DIF8 38900892
    41 9evx:D (1.71) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    42 9evx:D (1.71) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    43 9evx:D (1.71) BS03 PHO 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    44 9evx:D (1.71) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    45 9evx:D (1.71) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    46 9evx:D (1.71) BS06 PHO 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    47 9evx:D (1.71) BS07 BCT 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    48 9evx:D (1.71) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    49 9evx:D (1.71) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    50 9evx:E (1.71) BS01 HEM ? GO:0005506 ... Q8DIP0 38900892
    51 9evx:F (1.71) BS01 HEM ? GO:0005506 ... Q8DIN9 38900892
    52 9evx:H (1.71) BS01 CLA ? GO:0009523 ... Q8DJ43 38900892
    53 9evx:H (1.71) BS02 CLA ? GO:0009523 ... Q8DJ43 38900892
    54 9evx:H (1.71) BS03 CLA ? GO:0009523 ... Q8DJ43 38900892
    55 9evx:H (1.71) BS04 CLA ? GO:0009523 ... Q8DJ43 38900892
    56 9evx:I (1.71) BS01 CLA ? GO:0005737 ... Q8DJZ6 38900892
    57 9evx:K (1.71) BS01 peptide ? GO:0005737 ... Q9F1K9 38900892
    58 9evx:K (1.71) BS02 CLA ? GO:0005737 ... Q9F1K9 38900892
    59 9evx:K (1.71) BS03 CLA ? GO:0005737 ... Q9F1K9 38900892
    60 9evx:V (1.71) BS01 HEC ? N/A P0A386 38900892
    61 9evx:Z (1.71) BS01 peptide ? GO:0009523 ... Q8DHJ2 38900892
    62 9evx:a (1.71) BS01 FE2 1.10.3.9 GO:0005506 ... P0A444 38900892
    63 9evx:a (1.71) BS02 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    64 9evx:a (1.71) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    65 9evx:a (1.71) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    66 9evx:a (1.71) BS05 OEX 1.10.3.9 GO:0005506 ... P0A444 38900892
    67 9evx:a (1.71) BS06 PHO 1.10.3.9 GO:0005506 ... P0A444 38900892
    68 9evx:a (1.71) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    69 9evx:a (1.71) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    70 9evx:a (1.71) BS09 PHO 1.10.3.9 GO:0005506 ... P0A444 38900892
    71 9evx:a (1.71) BS10 BCT 1.10.3.9 GO:0005506 ... P0A444 38900892
    72 9evx:b (1.71) BS01 CLA ? GO:0009523 ... Q8DIQ1 38900892
    73 9evx:b (1.71) BS02 CLA ? GO:0009523 ... Q8DIQ1 38900892
    74 9evx:b (1.71) BS03 CLA ? GO:0009523 ... Q8DIQ1 38900892
    75 9evx:b (1.71) BS04 CLA ? GO:0009523 ... Q8DIQ1 38900892
    76 9evx:b (1.71) BS05 CLA ? GO:0009523 ... Q8DIQ1 38900892
    77 9evx:b (1.71) BS06 CLA ? GO:0009523 ... Q8DIQ1 38900892
    78 9evx:b (1.71) BS07 CLA ? GO:0009523 ... Q8DIQ1 38900892
    79 9evx:b (1.71) BS08 CLA ? GO:0009523 ... Q8DIQ1 38900892
    80 9evx:b (1.71) BS09 CLA ? GO:0009523 ... Q8DIQ1 38900892
    81 9evx:b (1.71) BS10 CLA ? GO:0009523 ... Q8DIQ1 38900892
    82 9evx:b (1.71) BS11 CLA ? GO:0009523 ... Q8DIQ1 38900892
    83 9evx:b (1.71) BS12 CLA ? GO:0009523 ... Q8DIQ1 38900892
    84 9evx:b (1.71) BS13 CLA ? GO:0009523 ... Q8DIQ1 38900892
    85 9evx:b (1.71) BS14 CLA ? GO:0009523 ... Q8DIQ1 38900892
    86 9evx:b (1.71) BS15 CLA ? GO:0009523 ... Q8DIQ1 38900892
    87 9evx:b (1.71) BS16 CLA ? GO:0009523 ... Q8DIQ1 38900892
    88 9evx:c (1.71) BS01 OEX ? GO:0005737 ... Q8DIF8 38900892
    89 9evx:c (1.71) BS02 CLA ? GO:0005737 ... Q8DIF8 38900892
    90 9evx:c (1.71) BS03 CLA ? GO:0005737 ... Q8DIF8 38900892
    91 9evx:c (1.71) BS04 CLA ? GO:0005737 ... Q8DIF8 38900892
    92 9evx:c (1.71) BS05 CLA ? GO:0005737 ... Q8DIF8 38900892
    93 9evx:c (1.71) BS06 CLA ? GO:0005737 ... Q8DIF8 38900892
    94 9evx:c (1.71) BS07 CLA ? GO:0005737 ... Q8DIF8 38900892
    95 9evx:c (1.71) BS08 CLA ? GO:0005737 ... Q8DIF8 38900892
    96 9evx:c (1.71) BS09 CLA ? GO:0005737 ... Q8DIF8 38900892
    97 9evx:c (1.71) BS10 CLA ? GO:0005737 ... Q8DIF8 38900892
    98 9evx:c (1.71) BS11 CLA ? GO:0005737 ... Q8DIF8 38900892
    99 9evx:c (1.71) BS12 CLA ? GO:0005737 ... Q8DIF8 38900892
    100 9evx:c (1.71) BS13 CLA ? GO:0005737 ... Q8DIF8 38900892
    101 9evx:c (1.71) BS14 CLA ? GO:0005737 ... Q8DIF8 38900892
    102 9evx:d (1.71) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    103 9evx:d (1.71) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    104 9evx:d (1.71) BS03 PHO 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    105 9evx:d (1.71) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    106 9evx:d (1.71) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    107 9evx:d (1.71) BS06 PHO 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    108 9evx:d (1.71) BS07 BCT 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    109 9evx:d (1.71) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    110 9evx:d (1.71) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    111 9evx:e (1.71) BS01 HEM ? GO:0005506 ... Q8DIP0 38900892
    112 9evx:f (1.71) BS01 HEM ? GO:0005506 ... Q8DIN9 38900892
    113 9evx:h (1.71) BS01 CLA ? GO:0009523 ... Q8DJ43 38900892
    114 9evx:h (1.71) BS02 CLA ? GO:0009523 ... Q8DJ43 38900892
    115 9evx:h (1.71) BS03 CLA ? GO:0009523 ... Q8DJ43 38900892
    116 9evx:h (1.71) BS04 CLA ? GO:0009523 ... Q8DJ43 38900892
    117 9evx:i (1.71) BS01 CLA ? GO:0005737 ... Q8DJZ6 38900892
    118 9evx:j (1.71) BS01 peptide ? GO:0009523 ... P59087 38900892
    119 9evx:k (1.71) BS01 peptide ? GO:0005737 ... Q9F1K9 38900892
    120 9evx:k (1.71) BS02 CLA ? GO:0005737 ... Q9F1K9 38900892
    121 9evx:k (1.71) BS03 CLA ? GO:0005737 ... Q9F1K9 38900892
    122 9evx:v (1.71) BS01 HEC ? N/A P0A386 38900892
    123 9evx:z (1.71) BS01 peptide ? GO:0009523 ... Q8DHJ2 38900892
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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