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BioLiP
Download all results in tab-seperated text for 135 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7yq2:A (1.9) BS01 OEX 1.10.3.9 GO:0005506 ... P0A446 36334624
    2 7yq2:A (1.9) BS02 FE2 1.10.3.9 GO:0005506 ... P0A446 36334624
    3 7yq2:A (1.9) BS03 CLA 1.10.3.9 GO:0005506 ... P0A446 36334624
    4 7yq2:A (1.9) BS04 CLA 1.10.3.9 GO:0005506 ... P0A446 36334624
    5 7yq2:A (1.9) BS05 CLA 1.10.3.9 GO:0005506 ... P0A446 36334624
    6 7yq2:A (1.9) BS06 PHO 1.10.3.9 GO:0005506 ... P0A446 36334624
    7 7yq2:A (1.9) BS07 PHO 1.10.3.9 GO:0005506 ... P0A446 36334624
    8 7yq2:A (1.9) BS08 CLA 1.10.3.9 GO:0005506 ... P0A446 36334624
    9 7yq2:A (1.9) BS09 BCT 1.10.3.9 GO:0005506 ... P0A446 36334624
    10 7yq2:A (1.9) BS10 CLA 1.10.3.9 GO:0005506 ... P0A446 36334624
    11 7yq2:B (1.9) BS01 CLA ? GO:0009521 ... Q8DIQ1 36334624
    12 7yq2:B (1.9) BS02 CLA ? GO:0009521 ... Q8DIQ1 36334624
    13 7yq2:B (1.9) BS03 CLA ? GO:0009521 ... Q8DIQ1 36334624
    14 7yq2:B (1.9) BS04 CLA ? GO:0009521 ... Q8DIQ1 36334624
    15 7yq2:B (1.9) BS05 CLA ? GO:0009521 ... Q8DIQ1 36334624
    16 7yq2:B (1.9) BS06 CLA ? GO:0009521 ... Q8DIQ1 36334624
    17 7yq2:B (1.9) BS07 CLA ? GO:0009521 ... Q8DIQ1 36334624
    18 7yq2:B (1.9) BS08 CLA ? GO:0009521 ... Q8DIQ1 36334624
    19 7yq2:B (1.9) BS09 CLA ? GO:0009521 ... Q8DIQ1 36334624
    20 7yq2:B (1.9) BS10 CLA ? GO:0009521 ... Q8DIQ1 36334624
    21 7yq2:B (1.9) BS11 CLA ? GO:0009521 ... Q8DIQ1 36334624
    22 7yq2:B (1.9) BS12 CLA ? GO:0009521 ... Q8DIQ1 36334624
    23 7yq2:B (1.9) BS13 CLA ? GO:0009521 ... Q8DIQ1 36334624
    24 7yq2:B (1.9) BS14 CLA ? GO:0009521 ... Q8DIQ1 36334624
    25 7yq2:B (1.9) BS15 CLA ? GO:0009521 ... Q8DIQ1 36334624
    26 7yq2:B (1.9) BS16 CLA ? GO:0009521 ... Q8DIQ1 36334624
    27 7yq2:B (1.9) BS17 GOL ? GO:0009521 ... Q8DIQ1 36334624
    28 7yq2:C (1.9) BS01 OEX ? GO:0005737 ... Q8DIF8 36334624
    29 7yq2:C (1.9) BS02 CLA ? GO:0005737 ... Q8DIF8 36334624
    30 7yq2:C (1.9) BS03 CLA ? GO:0005737 ... Q8DIF8 36334624
    31 7yq2:C (1.9) BS04 CLA ? GO:0005737 ... Q8DIF8 36334624
    32 7yq2:C (1.9) BS05 CLA ? GO:0005737 ... Q8DIF8 36334624
    33 7yq2:C (1.9) BS06 CLA ? GO:0005737 ... Q8DIF8 36334624
    34 7yq2:C (1.9) BS07 CLA ? GO:0005737 ... Q8DIF8 36334624
    35 7yq2:C (1.9) BS08 CLA ? GO:0005737 ... Q8DIF8 36334624
    36 7yq2:C (1.9) BS09 CLA ? GO:0005737 ... Q8DIF8 36334624
    37 7yq2:C (1.9) BS10 CLA ? GO:0005737 ... Q8DIF8 36334624
    38 7yq2:C (1.9) BS11 CLA ? GO:0005737 ... Q8DIF8 36334624
    39 7yq2:C (1.9) BS12 CLA ? GO:0005737 ... Q8DIF8 36334624
    40 7yq2:C (1.9) BS13 CLA ? GO:0005737 ... Q8DIF8 36334624
    41 7yq2:C (1.9) BS14 CLA ? GO:0005737 ... Q8DIF8 36334624
    42 7yq2:C (1.9) BS15 GOL ? GO:0005737 ... Q8DIF8 36334624
    43 7yq2:D (1.9) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    44 7yq2:D (1.9) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    45 7yq2:D (1.9) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    46 7yq2:D (1.9) BS04 PHO 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    47 7yq2:D (1.9) BS05 PHO 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    48 7yq2:D (1.9) BS06 BCT 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    49 7yq2:D (1.9) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    50 7yq2:D (1.9) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    51 7yq2:D (1.9) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    52 7yq2:E (1.9) BS01 HEM ? GO:0005506 ... Q8DIP0 36334624
    53 7yq2:F (1.9) BS01 HEM ? GO:0005506 ... Q8DIN9 36334624
    54 7yq2:H (1.9) BS01 CLA ? GO:0009523 ... Q8DJ43 36334624
    55 7yq2:H (1.9) BS02 CLA ? GO:0009523 ... Q8DJ43 36334624
    56 7yq2:H (1.9) BS03 CLA ? GO:0009523 ... Q8DJ43 36334624
    57 7yq2:H (1.9) BS04 RRX ? GO:0009523 ... Q8DJ43 36334624
    58 7yq2:I (1.9) BS01 CLA ? GO:0005737 ... Q8DJZ6 36334624
    59 7yq2:J (1.9) BS01 MG ? GO:0009523 ... P59087 36334624
    60 7yq2:K (1.9) BS01 CLA ? GO:0005737 ... Q9F1K9 36334624
    61 7yq2:K (1.9) BS02 CLA ? GO:0005737 ... Q9F1K9 36334624
    62 7yq2:O (1.9) BS01 CA ? GO:0009654 ... P0A431 36334624
    63 7yq2:O (1.9) BS02 GOL ? GO:0009654 ... P0A431 36334624
    64 7yq2:V (1.9) BS01 HEC ? GO:0005506 ... P0A386 36334624
    65 7yq2:V (1.9) BS02 GOL ? GO:0005506 ... P0A386 36334624
    66 7yq2:V (1.9) BS03 GOL ? GO:0005506 ... P0A386 36334624
    67 7yq2:X (1.9) BS01 CLA ? GO:0009523 ... Q9F1R6 36334624
    68 7yq2:X (1.9) BS02 RRX ? GO:0009523 ... Q9F1R6 36334624
    69 7yq2:Y (1.9) BS01 CLA ? GO:0009523 ... Q8DJI1 36334624
    70 7yq2:a (1.9) BS01 OEX 1.10.3.9 GO:0005506 ... P0A446 36334624
    71 7yq2:a (1.9) BS02 FE2 1.10.3.9 GO:0005506 ... P0A446 36334624
    72 7yq2:a (1.9) BS03 BCT 1.10.3.9 GO:0005506 ... P0A446 36334624
    73 7yq2:a (1.9) BS04 CLA 1.10.3.9 GO:0005506 ... P0A446 36334624
    74 7yq2:a (1.9) BS05 CLA 1.10.3.9 GO:0005506 ... P0A446 36334624
    75 7yq2:a (1.9) BS06 PHO 1.10.3.9 GO:0005506 ... P0A446 36334624
    76 7yq2:a (1.9) BS07 PHO 1.10.3.9 GO:0005506 ... P0A446 36334624
    77 7yq2:a (1.9) BS08 CLA 1.10.3.9 GO:0005506 ... P0A446 36334624
    78 7yq2:a (1.9) BS09 CLA 1.10.3.9 GO:0005506 ... P0A446 36334624
    79 7yq2:a (1.9) BS10 CLA 1.10.3.9 GO:0005506 ... P0A446 36334624
    80 7yq2:b (1.9) BS01 CLA ? GO:0009521 ... Q8DIQ1 36334624
    81 7yq2:b (1.9) BS02 CLA ? GO:0009521 ... Q8DIQ1 36334624
    82 7yq2:b (1.9) BS03 CLA ? GO:0009521 ... Q8DIQ1 36334624
    83 7yq2:b (1.9) BS04 CLA ? GO:0009521 ... Q8DIQ1 36334624
    84 7yq2:b (1.9) BS05 CLA ? GO:0009521 ... Q8DIQ1 36334624
    85 7yq2:b (1.9) BS06 CLA ? GO:0009521 ... Q8DIQ1 36334624
    86 7yq2:b (1.9) BS07 CLA ? GO:0009521 ... Q8DIQ1 36334624
    87 7yq2:b (1.9) BS08 CLA ? GO:0009521 ... Q8DIQ1 36334624
    88 7yq2:b (1.9) BS09 CLA ? GO:0009521 ... Q8DIQ1 36334624
    89 7yq2:b (1.9) BS10 CLA ? GO:0009521 ... Q8DIQ1 36334624
    90 7yq2:b (1.9) BS11 CLA ? GO:0009521 ... Q8DIQ1 36334624
    91 7yq2:b (1.9) BS12 CLA ? GO:0009521 ... Q8DIQ1 36334624
    92 7yq2:b (1.9) BS13 CLA ? GO:0009521 ... Q8DIQ1 36334624
    93 7yq2:b (1.9) BS14 CLA ? GO:0009521 ... Q8DIQ1 36334624
    94 7yq2:b (1.9) BS15 CLA ? GO:0009521 ... Q8DIQ1 36334624
    95 7yq2:b (1.9) BS16 CLA ? GO:0009521 ... Q8DIQ1 36334624
    96 7yq2:c (1.9) BS01 OEX ? GO:0005737 ... Q8DIF8 36334624
    97 7yq2:c (1.9) BS02 CA ? GO:0005737 ... Q8DIF8 36334624
    98 7yq2:c (1.9) BS03 CLA ? GO:0005737 ... Q8DIF8 36334624
    99 7yq2:c (1.9) BS04 CLA ? GO:0005737 ... Q8DIF8 36334624
    100 7yq2:c (1.9) BS05 CLA ? GO:0005737 ... Q8DIF8 36334624
    101 7yq2:c (1.9) BS06 CLA ? GO:0005737 ... Q8DIF8 36334624
    102 7yq2:c (1.9) BS07 CLA ? GO:0005737 ... Q8DIF8 36334624
    103 7yq2:c (1.9) BS08 CLA ? GO:0005737 ... Q8DIF8 36334624
    104 7yq2:c (1.9) BS09 CLA ? GO:0005737 ... Q8DIF8 36334624
    105 7yq2:c (1.9) BS10 CLA ? GO:0005737 ... Q8DIF8 36334624
    106 7yq2:c (1.9) BS11 CLA ? GO:0005737 ... Q8DIF8 36334624
    107 7yq2:c (1.9) BS12 CLA ? GO:0005737 ... Q8DIF8 36334624
    108 7yq2:c (1.9) BS13 CLA ? GO:0005737 ... Q8DIF8 36334624
    109 7yq2:c (1.9) BS14 CLA ? GO:0005737 ... Q8DIF8 36334624
    110 7yq2:c (1.9) BS15 CLA ? GO:0005737 ... Q8DIF8 36334624
    111 7yq2:c (1.9) BS16 GOL ? GO:0005737 ... Q8DIF8 36334624
    112 7yq2:d (1.9) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    113 7yq2:d (1.9) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    114 7yq2:d (1.9) BS03 PHO 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    115 7yq2:d (1.9) BS04 PHO 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    116 7yq2:d (1.9) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    117 7yq2:d (1.9) BS06 GOL 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    118 7yq2:d (1.9) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    119 7yq2:d (1.9) BS08 BCT 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    120 7yq2:d (1.9) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    121 7yq2:d (1.9) BS10 CLA 1.10.3.9 GO:0005506 ... Q8CM25 36334624
    122 7yq2:e (1.9) BS01 HEM ? GO:0005506 ... Q8DIP0 36334624
    123 7yq2:f (1.9) BS01 HEM ? GO:0005506 ... Q8DIN9 36334624
    124 7yq2:h (1.9) BS01 CLA ? GO:0009523 ... Q8DJ43 36334624
    125 7yq2:h (1.9) BS02 CLA ? GO:0009523 ... Q8DJ43 36334624
    126 7yq2:h (1.9) BS03 CLA ? GO:0009523 ... Q8DJ43 36334624
    127 7yq2:h (1.9) BS04 RRX ? GO:0009523 ... Q8DJ43 36334624
    128 7yq2:i (1.9) BS01 CLA ? GO:0005737 ... Q8DJZ6 36334624
    129 7yq2:j (1.9) BS01 MG ? GO:0009523 ... P59087 36334624
    130 7yq2:k (1.9) BS01 CLA ? GO:0005737 ... Q9F1K9 36334624
    131 7yq2:k (1.9) BS02 CLA ? GO:0005737 ... Q9F1K9 36334624
    132 7yq2:o (1.9) BS01 CA ? GO:0009654 ... P0A431 36334624
    133 7yq2:v (1.9) BS01 HEC ? GO:0005506 ... P0A386 36334624
    134 7yq2:x (1.9) BS01 CLA ? GO:0009523 ... Q9F1R6 36334624
    135 7yq2:y (1.9) BS01 CLA ? GO:0009523 ... Q8DJI1 36334624
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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