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BioLiP
Download all results in tab-seperated text for 123 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6w1v:A (2.09) BS01 FE2 1.10.3.9 GO:0005506 ... P0A444 32434915
    2 6w1v:A (2.09) BS02 CLA 1.10.3.9 GO:0005506 ... P0A444 32434915
    3 6w1v:A (2.09) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 32434915
    4 6w1v:A (2.09) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 32434915
    5 6w1v:A (2.09) BS05 OEX 1.10.3.9 GO:0005506 ... P0A444 32434915
    6 6w1v:A (2.09) BS06 OEY 1.10.3.9 GO:0005506 ... P0A444 32434915
    7 6w1v:A (2.09) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 32434915
    8 6w1v:A (2.09) BS08 PHO 1.10.3.9 GO:0005506 ... P0A444 32434915
    9 6w1v:A (2.09) BS09 PHO 1.10.3.9 GO:0005506 ... P0A444 32434915
    10 6w1v:B (2.09) BS01 CLA ? GO:0009521 ... Q8DIQ1 32434915
    11 6w1v:B (2.09) BS02 CLA ? GO:0009521 ... Q8DIQ1 32434915
    12 6w1v:B (2.09) BS03 CLA ? GO:0009521 ... Q8DIQ1 32434915
    13 6w1v:B (2.09) BS04 CLA ? GO:0009521 ... Q8DIQ1 32434915
    14 6w1v:B (2.09) BS05 CLA ? GO:0009521 ... Q8DIQ1 32434915
    15 6w1v:B (2.09) BS06 CLA ? GO:0009521 ... Q8DIQ1 32434915
    16 6w1v:B (2.09) BS07 CLA ? GO:0009521 ... Q8DIQ1 32434915
    17 6w1v:B (2.09) BS08 CLA ? GO:0009521 ... Q8DIQ1 32434915
    18 6w1v:B (2.09) BS09 CLA ? GO:0009521 ... Q8DIQ1 32434915
    19 6w1v:B (2.09) BS10 CLA ? GO:0009521 ... Q8DIQ1 32434915
    20 6w1v:B (2.09) BS11 CLA ? GO:0009521 ... Q8DIQ1 32434915
    21 6w1v:B (2.09) BS12 CLA ? GO:0009521 ... Q8DIQ1 32434915
    22 6w1v:B (2.09) BS13 CLA ? GO:0009521 ... Q8DIQ1 32434915
    23 6w1v:B (2.09) BS14 CLA ? GO:0009521 ... Q8DIQ1 32434915
    24 6w1v:B (2.09) BS15 CLA ? GO:0009521 ... Q8DIQ1 32434915
    25 6w1v:B (2.09) BS16 CLA ? GO:0009521 ... Q8DIQ1 32434915
    26 6w1v:C (2.09) BS01 OEX ? GO:0005737 ... Q8DIF8 32434915
    27 6w1v:C (2.09) BS02 OEY ? GO:0005737 ... Q8DIF8 32434915
    28 6w1v:C (2.09) BS03 CLA ? GO:0005737 ... Q8DIF8 32434915
    29 6w1v:C (2.09) BS04 CLA ? GO:0005737 ... Q8DIF8 32434915
    30 6w1v:C (2.09) BS05 CLA ? GO:0005737 ... Q8DIF8 32434915
    31 6w1v:C (2.09) BS06 CLA ? GO:0005737 ... Q8DIF8 32434915
    32 6w1v:C (2.09) BS07 CLA ? GO:0005737 ... Q8DIF8 32434915
    33 6w1v:C (2.09) BS08 CLA ? GO:0005737 ... Q8DIF8 32434915
    34 6w1v:C (2.09) BS09 CLA ? GO:0005737 ... Q8DIF8 32434915
    35 6w1v:C (2.09) BS10 CLA ? GO:0005737 ... Q8DIF8 32434915
    36 6w1v:C (2.09) BS11 CLA ? GO:0005737 ... Q8DIF8 32434915
    37 6w1v:C (2.09) BS12 CLA ? GO:0005737 ... Q8DIF8 32434915
    38 6w1v:C (2.09) BS13 CLA ? GO:0005737 ... Q8DIF8 32434915
    39 6w1v:C (2.09) BS14 CLA ? GO:0005737 ... Q8DIF8 32434915
    40 6w1v:C (2.09) BS15 CLA ? GO:0005737 ... Q8DIF8 32434915
    41 6w1v:D (2.09) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    42 6w1v:D (2.09) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    43 6w1v:D (2.09) BS03 BCT 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    44 6w1v:D (2.09) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    45 6w1v:D (2.09) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    46 6w1v:D (2.09) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    47 6w1v:D (2.09) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    48 6w1v:D (2.09) BS08 PHO 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    49 6w1v:D (2.09) BS09 PHO 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    50 6w1v:E (2.09) BS01 HEC ? GO:0005506 ... Q8DIP0 32434915
    51 6w1v:F (2.09) BS01 HEC ? GO:0005506 ... Q8DIN9 32434915
    52 6w1v:H (2.09) BS01 CLA ? GO:0009523 ... Q8DJ43 32434915
    53 6w1v:H (2.09) BS02 CLA ? GO:0009523 ... Q8DJ43 32434915
    54 6w1v:H (2.09) BS03 CLA ? GO:0009523 ... Q8DJ43 32434915
    55 6w1v:H (2.09) BS04 CLA ? GO:0009523 ... Q8DJ43 32434915
    56 6w1v:I (2.09) BS01 CLA ? GO:0005737 ... Q8DJZ6 32434915
    57 6w1v:K (2.09) BS01 peptide ? GO:0005737 ... Q9F1K9 32434915
    58 6w1v:K (2.09) BS02 CLA ? GO:0005737 ... Q9F1K9 32434915
    59 6w1v:K (2.09) BS03 CLA ? GO:0005737 ... Q9F1K9 32434915
    60 6w1v:V (2.09) BS01 HEC ? GO:0005506 ... P0A386 32434915
    61 6w1v:X (2.09) BS01 CLA ? GO:0009523 ... Q9F1R6 32434915
    62 6w1v:Z (2.09) BS01 peptide ? GO:0009523 ... Q8DHJ2 32434915
    63 6w1v:Z (2.09) BS02 CLA ? GO:0009523 ... Q8DHJ2 32434915
    64 6w1v:a (2.09) BS01 CLA 1.10.3.9 GO:0005506 ... P0A444 32434915
    65 6w1v:a (2.09) BS02 FE2 1.10.3.9 GO:0005506 ... P0A444 32434915
    66 6w1v:a (2.09) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 32434915
    67 6w1v:a (2.09) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 32434915
    68 6w1v:a (2.09) BS05 PHO 1.10.3.9 GO:0005506 ... P0A444 32434915
    69 6w1v:a (2.09) BS06 CLA 1.10.3.9 GO:0005506 ... P0A444 32434915
    70 6w1v:a (2.09) BS07 BCT 1.10.3.9 GO:0005506 ... P0A444 32434915
    71 6w1v:a (2.09) BS08 OEX 1.10.3.9 GO:0005506 ... P0A444 32434915
    72 6w1v:a (2.09) BS09 OEY 1.10.3.9 GO:0005506 ... P0A444 32434915
    73 6w1v:a (2.09) BS10 PHO 1.10.3.9 GO:0005506 ... P0A444 32434915
    74 6w1v:b (2.09) BS01 CLA ? GO:0009521 ... Q8DIQ1 32434915
    75 6w1v:b (2.09) BS02 CLA ? GO:0009521 ... Q8DIQ1 32434915
    76 6w1v:b (2.09) BS03 CLA ? GO:0009521 ... Q8DIQ1 32434915
    77 6w1v:b (2.09) BS04 CLA ? GO:0009521 ... Q8DIQ1 32434915
    78 6w1v:b (2.09) BS05 CLA ? GO:0009521 ... Q8DIQ1 32434915
    79 6w1v:b (2.09) BS06 CLA ? GO:0009521 ... Q8DIQ1 32434915
    80 6w1v:b (2.09) BS07 CLA ? GO:0009521 ... Q8DIQ1 32434915
    81 6w1v:b (2.09) BS08 CLA ? GO:0009521 ... Q8DIQ1 32434915
    82 6w1v:b (2.09) BS09 CLA ? GO:0009521 ... Q8DIQ1 32434915
    83 6w1v:b (2.09) BS10 CLA ? GO:0009521 ... Q8DIQ1 32434915
    84 6w1v:b (2.09) BS11 CLA ? GO:0009521 ... Q8DIQ1 32434915
    85 6w1v:b (2.09) BS12 CLA ? GO:0009521 ... Q8DIQ1 32434915
    86 6w1v:b (2.09) BS13 CLA ? GO:0009521 ... Q8DIQ1 32434915
    87 6w1v:b (2.09) BS14 CLA ? GO:0009521 ... Q8DIQ1 32434915
    88 6w1v:b (2.09) BS15 CLA ? GO:0009521 ... Q8DIQ1 32434915
    89 6w1v:b (2.09) BS16 CLA ? GO:0009521 ... Q8DIQ1 32434915
    90 6w1v:c (2.09) BS01 OEX ? GO:0005737 ... Q8DIF8 32434915
    91 6w1v:c (2.09) BS02 OEY ? GO:0005737 ... Q8DIF8 32434915
    92 6w1v:c (2.09) BS03 CLA ? GO:0005737 ... Q8DIF8 32434915
    93 6w1v:c (2.09) BS04 CLA ? GO:0005737 ... Q8DIF8 32434915
    94 6w1v:c (2.09) BS05 CLA ? GO:0005737 ... Q8DIF8 32434915
    95 6w1v:c (2.09) BS06 CLA ? GO:0005737 ... Q8DIF8 32434915
    96 6w1v:c (2.09) BS07 CLA ? GO:0005737 ... Q8DIF8 32434915
    97 6w1v:c (2.09) BS08 CLA ? GO:0005737 ... Q8DIF8 32434915
    98 6w1v:c (2.09) BS09 CLA ? GO:0005737 ... Q8DIF8 32434915
    99 6w1v:c (2.09) BS10 CLA ? GO:0005737 ... Q8DIF8 32434915
    100 6w1v:c (2.09) BS11 CLA ? GO:0005737 ... Q8DIF8 32434915
    101 6w1v:c (2.09) BS12 CLA ? GO:0005737 ... Q8DIF8 32434915
    102 6w1v:c (2.09) BS13 CLA ? GO:0005737 ... Q8DIF8 32434915
    103 6w1v:c (2.09) BS14 CLA ? GO:0005737 ... Q8DIF8 32434915
    104 6w1v:c (2.09) BS15 CLA ? GO:0005737 ... Q8DIF8 32434915
    105 6w1v:d (2.09) BS01 CLA 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    106 6w1v:d (2.09) BS02 FE2 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    107 6w1v:d (2.09) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    108 6w1v:d (2.09) BS04 PHO 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    109 6w1v:d (2.09) BS05 BCT 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    110 6w1v:d (2.09) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    111 6w1v:d (2.09) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    112 6w1v:d (2.09) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    113 6w1v:d (2.09) BS09 PHO 1.10.3.9 GO:0005506 ... Q8CM25 32434915
    114 6w1v:e (2.09) BS01 HEC ? GO:0005506 ... Q8DIP0 32434915
    115 6w1v:f (2.09) BS01 HEC ? GO:0005506 ... Q8DIN9 32434915
    116 6w1v:h (2.09) BS01 CLA ? GO:0009523 ... Q8DJ43 32434915
    117 6w1v:h (2.09) BS02 CLA ? GO:0009523 ... Q8DJ43 32434915
    118 6w1v:h (2.09) BS03 CLA ? GO:0009523 ... Q8DJ43 32434915
    119 6w1v:h (2.09) BS04 CLA ? GO:0009523 ... Q8DJ43 32434915
    120 6w1v:i (2.09) BS01 CLA ? GO:0005737 ... Q8DJZ6 32434915
    121 6w1v:k (2.09) BS01 CLA ? GO:0005737 ... Q9F1K9 32434915
    122 6w1v:v (2.09) BS01 HEC ? GO:0005506 ... P0A386 32434915
    123 6w1v:x (2.09) BS01 CLA ? GO:0009523 ... Q9F1R6 32434915
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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