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BioLiP
Download all results in tab-seperated text for 118 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5tis:A (2.25) BS01 OEX 1.10.3.9 GO:0005506 ... P0A444 27871088
    2 5tis:A (2.25) BS02 FE2 1.10.3.9 GO:0005506 ... P0A444 27871088
    3 5tis:A (2.25) BS03 BCT 1.10.3.9 GO:0005506 ... P0A444 27871088
    4 5tis:A (2.25) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 27871088
    5 5tis:A (2.25) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 27871088
    6 5tis:A (2.25) BS06 PHO 1.10.3.9 GO:0005506 ... P0A444 27871088
    7 5tis:A (2.25) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 27871088
    8 5tis:A (2.25) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 27871088
    9 5tis:A (2.25) BS09 CLA 1.10.3.9 GO:0005506 ... P0A444 27871088
    10 5tis:A (2.25) BS10 PHO 1.10.3.9 GO:0005506 ... P0A444 27871088
    11 5tis:B (2.25) BS01 CLA ? GO:0009521 ... Q8DIQ1 27871088
    12 5tis:B (2.25) BS02 CLA ? GO:0009521 ... Q8DIQ1 27871088
    13 5tis:B (2.25) BS03 CLA ? GO:0009521 ... Q8DIQ1 27871088
    14 5tis:B (2.25) BS04 CLA ? GO:0009521 ... Q8DIQ1 27871088
    15 5tis:B (2.25) BS05 CLA ? GO:0009521 ... Q8DIQ1 27871088
    16 5tis:B (2.25) BS06 CLA ? GO:0009521 ... Q8DIQ1 27871088
    17 5tis:B (2.25) BS07 CLA ? GO:0009521 ... Q8DIQ1 27871088
    18 5tis:B (2.25) BS08 CLA ? GO:0009521 ... Q8DIQ1 27871088
    19 5tis:B (2.25) BS09 CLA ? GO:0009521 ... Q8DIQ1 27871088
    20 5tis:B (2.25) BS10 CLA ? GO:0009521 ... Q8DIQ1 27871088
    21 5tis:B (2.25) BS11 CLA ? GO:0009521 ... Q8DIQ1 27871088
    22 5tis:B (2.25) BS12 CLA ? GO:0009521 ... Q8DIQ1 27871088
    23 5tis:B (2.25) BS13 CLA ? GO:0009521 ... Q8DIQ1 27871088
    24 5tis:B (2.25) BS14 CLA ? GO:0009521 ... Q8DIQ1 27871088
    25 5tis:B (2.25) BS15 CLA ? GO:0009521 ... Q8DIQ1 27871088
    26 5tis:B (2.25) BS16 CLA ? GO:0009521 ... Q8DIQ1 27871088
    27 5tis:C (2.25) BS01 OEX ? GO:0005737 ... Q8DIF8 27871088
    28 5tis:C (2.25) BS02 CLA ? GO:0005737 ... Q8DIF8 27871088
    29 5tis:C (2.25) BS03 CLA ? GO:0005737 ... Q8DIF8 27871088
    30 5tis:C (2.25) BS04 CLA ? GO:0005737 ... Q8DIF8 27871088
    31 5tis:C (2.25) BS05 CLA ? GO:0005737 ... Q8DIF8 27871088
    32 5tis:C (2.25) BS06 CLA ? GO:0005737 ... Q8DIF8 27871088
    33 5tis:C (2.25) BS07 CLA ? GO:0005737 ... Q8DIF8 27871088
    34 5tis:C (2.25) BS08 CLA ? GO:0005737 ... Q8DIF8 27871088
    35 5tis:C (2.25) BS09 CLA ? GO:0005737 ... Q8DIF8 27871088
    36 5tis:C (2.25) BS10 CLA ? GO:0005737 ... Q8DIF8 27871088
    37 5tis:C (2.25) BS11 CLA ? GO:0005737 ... Q8DIF8 27871088
    38 5tis:C (2.25) BS12 CLA ? GO:0005737 ... Q8DIF8 27871088
    39 5tis:C (2.25) BS13 CLA ? GO:0005737 ... Q8DIF8 27871088
    40 5tis:C (2.25) BS14 CLA ? GO:0005737 ... Q8DIF8 27871088
    41 5tis:D (2.25) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    42 5tis:D (2.25) BS02 BCT 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    43 5tis:D (2.25) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    44 5tis:D (2.25) BS04 PHO 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    45 5tis:D (2.25) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    46 5tis:D (2.25) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    47 5tis:D (2.25) BS07 PHO 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    48 5tis:D (2.25) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    49 5tis:D (2.25) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    50 5tis:E (2.25) BS01 HEM ? GO:0005506 ... Q8DIP0 27871088
    51 5tis:F (2.25) BS01 HEM ? GO:0005506 ... Q8DIN9 27871088
    52 5tis:H (2.25) BS01 CLA ? GO:0009523 ... Q8DJ43 27871088
    53 5tis:H (2.25) BS02 CLA ? GO:0009523 ... Q8DJ43 27871088
    54 5tis:H (2.25) BS03 CLA ? GO:0009523 ... Q8DJ43 27871088
    55 5tis:H (2.25) BS04 CLA ? GO:0009523 ... Q8DJ43 27871088
    56 5tis:I (2.25) BS01 CLA ? GO:0005737 ... Q8DJZ6 27871088
    57 5tis:K (2.25) BS01 peptide ? GO:0005737 ... Q9F1K9 27871088
    58 5tis:K (2.25) BS02 CLA ? GO:0005737 ... Q9F1K9 27871088
    59 5tis:M (2.25) BS01 CLA ? GO:0005737 ... Q8DHA7 27871088
    60 5tis:V (2.25) BS01 HEC ? GO:0005506 ... P0A386 27871088
    61 5tis:Z (2.25) BS01 peptide ? GO:0009523 ... Q8DHJ2 27871088
    62 5tis:a (2.25) BS01 OEX 1.10.3.9 GO:0005506 ... P0A444 27871088
    63 5tis:a (2.25) BS02 FE2 1.10.3.9 GO:0005506 ... P0A444 27871088
    64 5tis:a (2.25) BS03 BCT 1.10.3.9 GO:0005506 ... P0A444 27871088
    65 5tis:a (2.25) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 27871088
    66 5tis:a (2.25) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 27871088
    67 5tis:a (2.25) BS06 PHO 1.10.3.9 GO:0005506 ... P0A444 27871088
    68 5tis:a (2.25) BS07 PHO 1.10.3.9 GO:0005506 ... P0A444 27871088
    69 5tis:a (2.25) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 27871088
    70 5tis:a (2.25) BS09 CLA 1.10.3.9 GO:0005506 ... P0A444 27871088
    71 5tis:b (2.25) BS01 CLA ? GO:0009521 ... Q8DIQ1 27871088
    72 5tis:b (2.25) BS02 CLA ? GO:0009521 ... Q8DIQ1 27871088
    73 5tis:b (2.25) BS03 CLA ? GO:0009521 ... Q8DIQ1 27871088
    74 5tis:b (2.25) BS04 CLA ? GO:0009521 ... Q8DIQ1 27871088
    75 5tis:b (2.25) BS05 CLA ? GO:0009521 ... Q8DIQ1 27871088
    76 5tis:b (2.25) BS06 CLA ? GO:0009521 ... Q8DIQ1 27871088
    77 5tis:b (2.25) BS07 CLA ? GO:0009521 ... Q8DIQ1 27871088
    78 5tis:b (2.25) BS08 CLA ? GO:0009521 ... Q8DIQ1 27871088
    79 5tis:b (2.25) BS09 CLA ? GO:0009521 ... Q8DIQ1 27871088
    80 5tis:b (2.25) BS10 CLA ? GO:0009521 ... Q8DIQ1 27871088
    81 5tis:b (2.25) BS11 CLA ? GO:0009521 ... Q8DIQ1 27871088
    82 5tis:b (2.25) BS12 CLA ? GO:0009521 ... Q8DIQ1 27871088
    83 5tis:b (2.25) BS13 CLA ? GO:0009521 ... Q8DIQ1 27871088
    84 5tis:b (2.25) BS14 CLA ? GO:0009521 ... Q8DIQ1 27871088
    85 5tis:b (2.25) BS15 CLA ? GO:0009521 ... Q8DIQ1 27871088
    86 5tis:c (2.25) BS01 OEX ? GO:0005737 ... Q8DIF8 27871088
    87 5tis:c (2.25) BS02 CLA ? GO:0005737 ... Q8DIF8 27871088
    88 5tis:c (2.25) BS03 CLA ? GO:0005737 ... Q8DIF8 27871088
    89 5tis:c (2.25) BS04 CLA ? GO:0005737 ... Q8DIF8 27871088
    90 5tis:c (2.25) BS05 CLA ? GO:0005737 ... Q8DIF8 27871088
    91 5tis:c (2.25) BS06 CLA ? GO:0005737 ... Q8DIF8 27871088
    92 5tis:c (2.25) BS07 CLA ? GO:0005737 ... Q8DIF8 27871088
    93 5tis:c (2.25) BS08 CLA ? GO:0005737 ... Q8DIF8 27871088
    94 5tis:c (2.25) BS09 CLA ? GO:0005737 ... Q8DIF8 27871088
    95 5tis:c (2.25) BS10 CLA ? GO:0005737 ... Q8DIF8 27871088
    96 5tis:c (2.25) BS11 CLA ? GO:0005737 ... Q8DIF8 27871088
    97 5tis:c (2.25) BS12 CLA ? GO:0005737 ... Q8DIF8 27871088
    98 5tis:c (2.25) BS13 CLA ? GO:0005737 ... Q8DIF8 27871088
    99 5tis:c (2.25) BS14 CLA ? GO:0005737 ... Q8DIF8 27871088
    100 5tis:d (2.25) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    101 5tis:d (2.25) BS02 BCT 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    102 5tis:d (2.25) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    103 5tis:d (2.25) BS04 PHO 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    104 5tis:d (2.25) BS05 PHO 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    105 5tis:d (2.25) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    106 5tis:d (2.25) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    107 5tis:d (2.25) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    108 5tis:d (2.25) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 27871088
    109 5tis:e (2.25) BS01 HEM ? GO:0005506 ... Q8DIP0 27871088
    110 5tis:f (2.25) BS01 HEM ? GO:0005506 ... Q8DIN9 27871088
    111 5tis:h (2.25) BS01 CLA ? GO:0009523 ... Q8DJ43 27871088
    112 5tis:h (2.25) BS02 CLA ? GO:0009523 ... Q8DJ43 27871088
    113 5tis:i (2.25) BS01 CLA ? GO:0005737 ... Q8DJZ6 27871088
    114 5tis:i (2.25) BS02 CLA ? GO:0005737 ... Q8DJZ6 27871088
    115 5tis:k (2.25) BS01 CLA ? GO:0005737 ... Q9F1K9 27871088
    116 5tis:k (2.25) BS02 CLA ? GO:0005737 ... Q9F1K9 27871088
    117 5tis:v (2.25) BS01 HEC ? GO:0005506 ... P0A386 27871088
    118 5tis:x (2.25) BS01 CLA ? GO:0009523 ... Q9F1R6 27871088
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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