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BioLiP
Download all results in tab-seperated text for 131 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5h2f:A (2.2) BS01 OEX 1.10.3.9 GO:0005506 ... P0A444 28272640
    2 5h2f:A (2.2) BS02 FE2 1.10.3.9 GO:0005506 ... P0A444 28272640
    3 5h2f:A (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    4 5h2f:A (2.2) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    5 5h2f:A (2.2) BS05 PHO 1.10.3.9 GO:0005506 ... P0A444 28272640
    6 5h2f:A (2.2) BS06 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    7 5h2f:A (2.2) BS07 BCT 1.10.3.9 GO:0005506 ... P0A444 28272640
    8 5h2f:A (2.2) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    9 5h2f:A (2.2) BS09 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    10 5h2f:A (2.2) BS10 PHO 1.10.3.9 GO:0005506 ... P0A444 28272640
    11 5h2f:B (2.2) BS01 CLA ? GO:0009521 ... Q8DIQ1 28272640
    12 5h2f:B (2.2) BS02 CLA ? GO:0009521 ... Q8DIQ1 28272640
    13 5h2f:B (2.2) BS03 CLA ? GO:0009521 ... Q8DIQ1 28272640
    14 5h2f:B (2.2) BS04 CLA ? GO:0009521 ... Q8DIQ1 28272640
    15 5h2f:B (2.2) BS05 CLA ? GO:0009521 ... Q8DIQ1 28272640
    16 5h2f:B (2.2) BS06 CLA ? GO:0009521 ... Q8DIQ1 28272640
    17 5h2f:B (2.2) BS07 CLA ? GO:0009521 ... Q8DIQ1 28272640
    18 5h2f:B (2.2) BS08 CLA ? GO:0009521 ... Q8DIQ1 28272640
    19 5h2f:B (2.2) BS09 CLA ? GO:0009521 ... Q8DIQ1 28272640
    20 5h2f:B (2.2) BS10 CLA ? GO:0009521 ... Q8DIQ1 28272640
    21 5h2f:B (2.2) BS11 CLA ? GO:0009521 ... Q8DIQ1 28272640
    22 5h2f:B (2.2) BS12 CLA ? GO:0009521 ... Q8DIQ1 28272640
    23 5h2f:B (2.2) BS13 CLA ? GO:0009521 ... Q8DIQ1 28272640
    24 5h2f:B (2.2) BS14 CLA ? GO:0009521 ... Q8DIQ1 28272640
    25 5h2f:B (2.2) BS15 CLA ? GO:0009521 ... Q8DIQ1 28272640
    26 5h2f:B (2.2) BS16 CLA ? GO:0009521 ... Q8DIQ1 28272640
    27 5h2f:C (2.2) BS01 OEX ? GO:0005737 ... Q8DIF8 28272640
    28 5h2f:C (2.2) BS02 CLA ? GO:0005737 ... Q8DIF8 28272640
    29 5h2f:C (2.2) BS03 CLA ? GO:0005737 ... Q8DIF8 28272640
    30 5h2f:C (2.2) BS04 CLA ? GO:0005737 ... Q8DIF8 28272640
    31 5h2f:C (2.2) BS05 CLA ? GO:0005737 ... Q8DIF8 28272640
    32 5h2f:C (2.2) BS06 CLA ? GO:0005737 ... Q8DIF8 28272640
    33 5h2f:C (2.2) BS07 CLA ? GO:0005737 ... Q8DIF8 28272640
    34 5h2f:C (2.2) BS08 CLA ? GO:0005737 ... Q8DIF8 28272640
    35 5h2f:C (2.2) BS09 CLA ? GO:0005737 ... Q8DIF8 28272640
    36 5h2f:C (2.2) BS10 CLA ? GO:0005737 ... Q8DIF8 28272640
    37 5h2f:C (2.2) BS11 CLA ? GO:0005737 ... Q8DIF8 28272640
    38 5h2f:C (2.2) BS12 CLA ? GO:0005737 ... Q8DIF8 28272640
    39 5h2f:C (2.2) BS13 CLA ? GO:0005737 ... Q8DIF8 28272640
    40 5h2f:C (2.2) BS14 CLA ? GO:0005737 ... Q8DIF8 28272640
    41 5h2f:D (2.2) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    42 5h2f:D (2.2) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    43 5h2f:D (2.2) BS03 PHO 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    44 5h2f:D (2.2) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    45 5h2f:D (2.2) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    46 5h2f:D (2.2) BS06 PHO 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    47 5h2f:D (2.2) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    48 5h2f:D (2.2) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    49 5h2f:E (2.2) BS01 HEM ? GO:0005506 ... Q8DIP0 28272640
    50 5h2f:F (2.2) BS01 HEM ? GO:0009523 ... Q8DIN9 28272640
    51 5h2f:H (2.2) BS01 CLA ? GO:0009523 ... Q8DJ43 28272640
    52 5h2f:H (2.2) BS02 CLA ? GO:0009523 ... Q8DJ43 28272640
    53 5h2f:H (2.2) BS03 CLA ? GO:0009523 ... Q8DJ43 28272640
    54 5h2f:H (2.2) BS04 RRX ? GO:0009523 ... Q8DJ43 28272640
    55 5h2f:I (2.2) BS01 CLA ? GO:0005737 ... Q8DJZ6 28272640
    56 5h2f:J (2.2) BS01 MG ? GO:0009523 ... P59087 28272640
    57 5h2f:K (2.2) BS01 peptide ? GO:0009523 ... Q9F1K9 28272640
    58 5h2f:K (2.2) BS02 CLA ? GO:0009523 ... Q9F1K9 28272640
    59 5h2f:K (2.2) BS03 CLA ? GO:0009523 ... Q9F1K9 28272640
    60 5h2f:K (2.2) BS04 MG ? GO:0009523 ... Q9F1K9 28272640
    61 5h2f:O (2.2) BS01 CA ? GO:0009523 ... P0A431 28272640
    62 5h2f:V (2.2) BS01 HEC ? GO:0005506 ... P0A386 28272640
    63 5h2f:X (2.2) BS01 CLA ? GO:0009523 ... Q9F1R6 28272640
    64 5h2f:Z (2.2) BS01 peptide ? GO:0009523 ... Q8DHJ2 28272640
    65 5h2f:a (2.2) BS01 OEX 1.10.3.9 GO:0005506 ... P0A444 28272640
    66 5h2f:a (2.2) BS02 FE2 1.10.3.9 GO:0005506 ... P0A444 28272640
    67 5h2f:a (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    68 5h2f:a (2.2) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    69 5h2f:a (2.2) BS05 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    70 5h2f:a (2.2) BS06 PHO 1.10.3.9 GO:0005506 ... P0A444 28272640
    71 5h2f:a (2.2) BS07 PHO 1.10.3.9 GO:0005506 ... P0A444 28272640
    72 5h2f:a (2.2) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    73 5h2f:a (2.2) BS09 BCT 1.10.3.9 GO:0005506 ... P0A444 28272640
    74 5h2f:a (2.2) BS10 CLA 1.10.3.9 GO:0005506 ... P0A444 28272640
    75 5h2f:b (2.2) BS01 CLA ? GO:0009521 ... Q8DIQ1 28272640
    76 5h2f:b (2.2) BS02 CLA ? GO:0009521 ... Q8DIQ1 28272640
    77 5h2f:b (2.2) BS03 CLA ? GO:0009521 ... Q8DIQ1 28272640
    78 5h2f:b (2.2) BS04 CLA ? GO:0009521 ... Q8DIQ1 28272640
    79 5h2f:b (2.2) BS05 CLA ? GO:0009521 ... Q8DIQ1 28272640
    80 5h2f:b (2.2) BS06 CLA ? GO:0009521 ... Q8DIQ1 28272640
    81 5h2f:b (2.2) BS07 CLA ? GO:0009521 ... Q8DIQ1 28272640
    82 5h2f:b (2.2) BS08 CLA ? GO:0009521 ... Q8DIQ1 28272640
    83 5h2f:b (2.2) BS09 CLA ? GO:0009521 ... Q8DIQ1 28272640
    84 5h2f:b (2.2) BS10 CLA ? GO:0009521 ... Q8DIQ1 28272640
    85 5h2f:b (2.2) BS11 CLA ? GO:0009521 ... Q8DIQ1 28272640
    86 5h2f:b (2.2) BS12 CLA ? GO:0009521 ... Q8DIQ1 28272640
    87 5h2f:b (2.2) BS13 CLA ? GO:0009521 ... Q8DIQ1 28272640
    88 5h2f:b (2.2) BS14 CLA ? GO:0009521 ... Q8DIQ1 28272640
    89 5h2f:b (2.2) BS15 CLA ? GO:0009521 ... Q8DIQ1 28272640
    90 5h2f:b (2.2) BS16 CLA ? GO:0009521 ... Q8DIQ1 28272640
    91 5h2f:c (2.2) BS01 OEX ? GO:0005737 ... Q8DIF8 28272640
    92 5h2f:c (2.2) BS02 CA ? GO:0005737 ... Q8DIF8 28272640
    93 5h2f:c (2.2) BS03 CLA ? GO:0005737 ... Q8DIF8 28272640
    94 5h2f:c (2.2) BS04 CLA ? GO:0005737 ... Q8DIF8 28272640
    95 5h2f:c (2.2) BS05 CLA ? GO:0005737 ... Q8DIF8 28272640
    96 5h2f:c (2.2) BS06 CLA ? GO:0005737 ... Q8DIF8 28272640
    97 5h2f:c (2.2) BS07 CLA ? GO:0005737 ... Q8DIF8 28272640
    98 5h2f:c (2.2) BS08 CLA ? GO:0005737 ... Q8DIF8 28272640
    99 5h2f:c (2.2) BS09 CLA ? GO:0005737 ... Q8DIF8 28272640
    100 5h2f:c (2.2) BS10 CLA ? GO:0005737 ... Q8DIF8 28272640
    101 5h2f:c (2.2) BS11 CLA ? GO:0005737 ... Q8DIF8 28272640
    102 5h2f:c (2.2) BS12 CLA ? GO:0005737 ... Q8DIF8 28272640
    103 5h2f:c (2.2) BS13 CLA ? GO:0005737 ... Q8DIF8 28272640
    104 5h2f:c (2.2) BS14 CLA ? GO:0005737 ... Q8DIF8 28272640
    105 5h2f:c (2.2) BS15 CLA ? GO:0005737 ... Q8DIF8 28272640
    106 5h2f:d (2.2) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    107 5h2f:d (2.2) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    108 5h2f:d (2.2) BS03 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    109 5h2f:d (2.2) BS04 PHO 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    110 5h2f:d (2.2) BS05 PHO 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    111 5h2f:d (2.2) BS06 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    112 5h2f:d (2.2) BS07 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    113 5h2f:d (2.2) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 28272640
    114 5h2f:e (2.2) BS01 HEM ? GO:0005506 ... Q8DIP0 28272640
    115 5h2f:f (2.2) BS01 HEM ? GO:0009523 ... Q8DIN9 28272640
    116 5h2f:h (2.2) BS01 CLA ? GO:0009523 ... Q8DJ43 28272640
    117 5h2f:h (2.2) BS02 CLA ? GO:0009523 ... Q8DJ43 28272640
    118 5h2f:h (2.2) BS03 CLA ? GO:0009523 ... Q8DJ43 28272640
    119 5h2f:h (2.2) BS04 CLA ? GO:0009523 ... Q8DJ43 28272640
    120 5h2f:h (2.2) BS05 CLA ? GO:0009523 ... Q8DJ43 28272640
    121 5h2f:h (2.2) BS06 RRX ? GO:0009523 ... Q8DJ43 28272640
    122 5h2f:i (2.2) BS01 CLA ? GO:0005737 ... Q8DJZ6 28272640
    123 5h2f:j (2.2) BS01 MG ? GO:0009523 ... P59087 28272640
    124 5h2f:k (2.2) BS01 peptide ? GO:0009523 ... Q9F1K9 28272640
    125 5h2f:k (2.2) BS02 CLA ? GO:0009523 ... Q9F1K9 28272640
    126 5h2f:k (2.2) BS03 CLA ? GO:0009523 ... Q9F1K9 28272640
    127 5h2f:k (2.2) BS04 MG ? GO:0009523 ... Q9F1K9 28272640
    128 5h2f:o (2.2) BS01 CA ? GO:0009523 ... P0A431 28272640
    129 5h2f:v (2.2) BS01 HEC ? GO:0005506 ... P0A386 28272640
    130 5h2f:x (2.2) BS01 CLA ? GO:0009523 ... Q9F1R6 28272640
    131 5h2f:z (2.2) BS01 peptide ? GO:0009523 ... Q8DHJ2 28272640
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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