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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM DMFold SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 257 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4yuu:A1 (2.77) BS01 peptide 1.10.3.9 GO:0005506 ... O19895 26757821
    2 4yuu:A1 (2.77) BS02 peptide 1.10.3.9 GO:0005506 ... O19895 26757821
    3 4yuu:A1 (2.77) BS03 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    4 4yuu:A1 (2.77) BS04 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    5 4yuu:A1 (2.77) BS05 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    6 4yuu:A1 (2.77) BS06 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    7 4yuu:A1 (2.77) BS07 OEX 1.10.3.9 GO:0005506 ... O19895 26757821
    8 4yuu:A1 (2.77) BS08 PHO 1.10.3.9 GO:0005506 ... O19895 26757821
    9 4yuu:A1 (2.77) BS09 FE 1.10.3.9 GO:0005506 ... O19895 26757821
    10 4yuu:A1 (2.77) BS10 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    11 4yuu:A1 (2.77) BS11 PHO 1.10.3.9 GO:0005506 ... O19895 26757821
    12 4yuu:A2 (2.77) BS01 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    13 4yuu:A2 (2.77) BS02 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    14 4yuu:A2 (2.77) BS03 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    15 4yuu:A2 (2.77) BS04 OEX 1.10.3.9 GO:0005506 ... O19895 26757821
    16 4yuu:A2 (2.77) BS05 PHO 1.10.3.9 GO:0005506 ... O19895 26757821
    17 4yuu:A2 (2.77) BS06 FE 1.10.3.9 GO:0005506 ... O19895 26757821
    18 4yuu:A2 (2.77) BS07 BCT 1.10.3.9 GO:0005506 ... O19895 26757821
    19 4yuu:A2 (2.77) BS08 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    20 4yuu:A2 (2.77) BS09 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    21 4yuu:A2 (2.77) BS10 PHO 1.10.3.9 GO:0005506 ... O19895 26757821
    22 4yuu:B1 (2.77) BS01 CLA ? GO:0009507 ... O19928 26757821
    23 4yuu:B1 (2.77) BS02 CLA ? GO:0009507 ... O19928 26757821
    24 4yuu:B1 (2.77) BS03 CLA ? GO:0009507 ... O19928 26757821
    25 4yuu:B1 (2.77) BS04 CLA ? GO:0009507 ... O19928 26757821
    26 4yuu:B1 (2.77) BS05 CLA ? GO:0009507 ... O19928 26757821
    27 4yuu:B1 (2.77) BS06 CLA ? GO:0009507 ... O19928 26757821
    28 4yuu:B1 (2.77) BS07 CLA ? GO:0009507 ... O19928 26757821
    29 4yuu:B1 (2.77) BS08 CLA ? GO:0009507 ... O19928 26757821
    30 4yuu:B1 (2.77) BS09 CLA ? GO:0009507 ... O19928 26757821
    31 4yuu:B1 (2.77) BS10 CLA ? GO:0009507 ... O19928 26757821
    32 4yuu:B1 (2.77) BS11 CLA ? GO:0009507 ... O19928 26757821
    33 4yuu:B1 (2.77) BS12 CLA ? GO:0009507 ... O19928 26757821
    34 4yuu:B1 (2.77) BS13 CLA ? GO:0009507 ... O19928 26757821
    35 4yuu:B1 (2.77) BS14 CLA ? GO:0009507 ... O19928 26757821
    36 4yuu:B1 (2.77) BS15 CLA ? GO:0009507 ... O19928 26757821
    37 4yuu:B1 (2.77) BS16 CLA ? GO:0009507 ... O19928 26757821
    38 4yuu:B2 (2.77) BS01 CLA ? GO:0009507 ... O19928 26757821
    39 4yuu:B2 (2.77) BS02 CLA ? GO:0009507 ... O19928 26757821
    40 4yuu:B2 (2.77) BS03 CLA ? GO:0009507 ... O19928 26757821
    41 4yuu:B2 (2.77) BS04 CLA ? GO:0009507 ... O19928 26757821
    42 4yuu:B2 (2.77) BS05 CLA ? GO:0009507 ... O19928 26757821
    43 4yuu:B2 (2.77) BS06 CLA ? GO:0009507 ... O19928 26757821
    44 4yuu:B2 (2.77) BS07 CLA ? GO:0009507 ... O19928 26757821
    45 4yuu:B2 (2.77) BS08 CLA ? GO:0009507 ... O19928 26757821
    46 4yuu:B2 (2.77) BS09 CLA ? GO:0009507 ... O19928 26757821
    47 4yuu:B2 (2.77) BS10 CLA ? GO:0009507 ... O19928 26757821
    48 4yuu:B2 (2.77) BS11 CLA ? GO:0009507 ... O19928 26757821
    49 4yuu:B2 (2.77) BS12 CLA ? GO:0009507 ... O19928 26757821
    50 4yuu:B2 (2.77) BS13 CLA ? GO:0009507 ... O19928 26757821
    51 4yuu:B2 (2.77) BS14 CLA ? GO:0009507 ... O19928 26757821
    52 4yuu:B2 (2.77) BS15 CLA ? GO:0009507 ... O19928 26757821
    53 4yuu:B2 (2.77) BS16 CLA ? GO:0009507 ... O19928 26757821
    54 4yuu:C1 (2.77) BS01 OEX ? GO:0005737 ... Q9TM46 26757821
    55 4yuu:C1 (2.77) BS02 CLA ? GO:0005737 ... Q9TM46 26757821
    56 4yuu:C1 (2.77) BS03 CLA ? GO:0005737 ... Q9TM46 26757821
    57 4yuu:C1 (2.77) BS04 CLA ? GO:0005737 ... Q9TM46 26757821
    58 4yuu:C1 (2.77) BS05 CLA ? GO:0005737 ... Q9TM46 26757821
    59 4yuu:C1 (2.77) BS06 CLA ? GO:0005737 ... Q9TM46 26757821
    60 4yuu:C1 (2.77) BS07 CLA ? GO:0005737 ... Q9TM46 26757821
    61 4yuu:C1 (2.77) BS08 CLA ? GO:0005737 ... Q9TM46 26757821
    62 4yuu:C1 (2.77) BS09 CLA ? GO:0005737 ... Q9TM46 26757821
    63 4yuu:C1 (2.77) BS10 CLA ? GO:0005737 ... Q9TM46 26757821
    64 4yuu:C1 (2.77) BS11 CLA ? GO:0005737 ... Q9TM46 26757821
    65 4yuu:C1 (2.77) BS12 CLA ? GO:0005737 ... Q9TM46 26757821
    66 4yuu:C1 (2.77) BS13 CLA ? GO:0005737 ... Q9TM46 26757821
    67 4yuu:C1 (2.77) BS14 CLA ? GO:0005737 ... Q9TM46 26757821
    68 4yuu:C2 (2.77) BS01 OEX ? GO:0005737 ... Q9TM46 26757821
    69 4yuu:C2 (2.77) BS02 CLA ? GO:0005737 ... Q9TM46 26757821
    70 4yuu:C2 (2.77) BS03 CLA ? GO:0005737 ... Q9TM46 26757821
    71 4yuu:C2 (2.77) BS04 CLA ? GO:0005737 ... Q9TM46 26757821
    72 4yuu:C2 (2.77) BS05 CLA ? GO:0005737 ... Q9TM46 26757821
    73 4yuu:C2 (2.77) BS06 CLA ? GO:0005737 ... Q9TM46 26757821
    74 4yuu:C2 (2.77) BS07 CLA ? GO:0005737 ... Q9TM46 26757821
    75 4yuu:C2 (2.77) BS08 CLA ? GO:0005737 ... Q9TM46 26757821
    76 4yuu:C2 (2.77) BS09 CLA ? GO:0005737 ... Q9TM46 26757821
    77 4yuu:C2 (2.77) BS10 CLA ? GO:0005737 ... Q9TM46 26757821
    78 4yuu:C2 (2.77) BS11 CLA ? GO:0005737 ... Q9TM46 26757821
    79 4yuu:C2 (2.77) BS12 CLA ? GO:0005737 ... Q9TM46 26757821
    80 4yuu:C2 (2.77) BS13 CLA ? GO:0005737 ... Q9TM46 26757821
    81 4yuu:C2 (2.77) BS14 CLA ? GO:0005737 ... Q9TM46 26757821
    82 4yuu:D1 (2.77) BS01 peptide 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    83 4yuu:D1 (2.77) BS02 peptide 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    84 4yuu:D1 (2.77) BS03 CLA 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    85 4yuu:D1 (2.77) BS04 CLA 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    86 4yuu:D1 (2.77) BS05 PHO 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    87 4yuu:D1 (2.77) BS06 FE 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    88 4yuu:D1 (2.77) BS07 BCT 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    89 4yuu:D1 (2.77) BS08 CLA 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    90 4yuu:D1 (2.77) BS09 CLA 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    91 4yuu:D1 (2.77) BS10 CLA 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    92 4yuu:D1 (2.77) BS11 PHO 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    93 4yuu:D2 (2.77) BS01 CLA 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    94 4yuu:D2 (2.77) BS02 PHO 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    95 4yuu:D2 (2.77) BS03 FE 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    96 4yuu:D2 (2.77) BS04 BCT 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    97 4yuu:D2 (2.77) BS05 CLA 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    98 4yuu:D2 (2.77) BS06 CLA 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    99 4yuu:D2 (2.77) BS07 CLA 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    100 4yuu:D2 (2.77) BS08 CLA 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    101 4yuu:D2 (2.77) BS09 PHO 1.10.3.9 GO:0005506 ... Q9TM47 26757821
    102 4yuu:E1 (2.77) BS01 peptide ? GO:0005506 ... Q9TM20 26757821
    103 4yuu:E1 (2.77) BS02 HEM ? GO:0005506 ... Q9TM20 26757821
    104 4yuu:F2 (2.77) BS01 HEM ? GO:0005506 ... Q9TM21 26757821
    105 4yuu:H1 (2.77) BS01 peptide ? GO:0009507 ... O19925 26757821
    106 4yuu:H1 (2.77) BS02 peptide ? GO:0009507 ... O19925 26757821
    107 4yuu:H1 (2.77) BS03 CLA ? GO:0009507 ... O19925 26757821
    108 4yuu:H1 (2.77) BS04 CLA ? GO:0009507 ... O19925 26757821
    109 4yuu:H1 (2.77) BS05 CLA ? GO:0009507 ... O19925 26757821
    110 4yuu:H2 (2.77) BS01 peptide ? GO:0009507 ... O19925 26757821
    111 4yuu:H2 (2.77) BS02 CLA ? GO:0009507 ... O19925 26757821
    112 4yuu:H2 (2.77) BS03 CLA ? GO:0009507 ... O19925 26757821
    113 4yuu:I1 (2.77) BS01 peptide ? GO:0005737 ... O19882 26757821
    114 4yuu:I1 (2.77) BS02 CLA ? GO:0005737 ... O19882 26757821
    115 4yuu:I2 (2.77) BS01 CLA ? GO:0005737 ... O19882 26757821
    116 4yuu:J1 (2.77) BS01 peptide ? GO:0009507 ... Q9TM23 26757821
    117 4yuu:K1 (2.77) BS01 peptide ? GO:0005737 ... Q9TLR0 26757821
    118 4yuu:K1 (2.77) BS02 CLA ? GO:0005737 ... Q9TLR0 26757821
    119 4yuu:K1 (2.77) BS03 CLA ? GO:0005737 ... Q9TLR0 26757821
    120 4yuu:K2 (2.77) BS01 peptide ? GO:0005737 ... Q9TLR0 26757821
    121 4yuu:K2 (2.77) BS02 CLA ? GO:0005737 ... Q9TLR0 26757821
    122 4yuu:L2 (2.77) BS01 CLA ? GO:0005737 ... Q9TM22 26757821
    123 4yuu:M2 (2.77) BS01 CLA N/A GO:0009523 ... N/A 26757821
    124 4yuu:O1 (2.77) BS01 CA N/A GO:0009654 ... N/A 26757821
    125 4yuu:V1 (2.77) BS01 HEM ? GO:0005506 ... Q76FB0 26757821
    126 4yuu:V2 (2.77) BS01 HEM ? GO:0005506 ... Q76FB0 26757821
    127 4yuu:Z2 (2.77) BS01 peptide N/A GO:0009523 ... N/A 26757821
    128 4yuu:a1 (2.77) BS01 peptide 1.10.3.9 GO:0005506 ... O19895 26757821
    129 4yuu:a1 (2.77) BS02 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    130 4yuu:a1 (2.77) BS03 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    131 4yuu:a1 (2.77) BS04 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    132 4yuu:a1 (2.77) BS05 OEX 1.10.3.9 GO:0005506 ... O19895 26757821
    133 4yuu:a1 (2.77) BS06 FE 1.10.3.9 GO:0005506 ... O19895 26757821
    134 4yuu:a1 (2.77) BS07 PHO 1.10.3.9 GO:0005506 ... O19895 26757821
    135 4yuu:a1 (2.77) BS08 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    136 4yuu:a1 (2.77) BS09 PHO 1.10.3.9 GO:0005506 ... O19895 26757821
    137 4yuu:a1 (2.77) BS10 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    138 4yuu:a2 (2.77) BS01 peptide 1.10.3.9 GO:0005506 ... O19895 26757821
    139 4yuu:a2 (2.77) BS02 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    140 4yuu:a2 (2.77) BS03 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    141 4yuu:a2 (2.77) BS04 OEX 1.10.3.9 GO:0005506 ... O19895 26757821
    142 4yuu:a2 (2.77) BS05 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    143 4yuu:a2 (2.77) BS06 FE 1.10.3.9 GO:0005506 ... O19895 26757821
    144 4yuu:a2 (2.77) BS07 PHO 1.10.3.9 GO:0005506 ... O19895 26757821
    145 4yuu:a2 (2.77) BS08 BCT 1.10.3.9 GO:0005506 ... O19895 26757821
    146 4yuu:a2 (2.77) BS09 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    147 4yuu:a2 (2.77) BS10 CLA 1.10.3.9 GO:0005506 ... O19895 26757821
    148 4yuu:a2 (2.77) BS11 PHO 1.10.3.9 GO:0005506 ... O19895 26757821
    149 4yuu:b1 (2.77) BS01 CLA ? GO:0009507 ... O19928 26757821
    150 4yuu:b1 (2.77) BS02 CLA ? GO:0009507 ... O19928 26757821
    151 4yuu:b1 (2.77) BS03 CLA ? GO:0009507 ... O19928 26757821
    152 4yuu:b1 (2.77) BS04 CLA ? GO:0009507 ... O19928 26757821
    153 4yuu:b1 (2.77) BS05 CLA ? GO:0009507 ... O19928 26757821
    154 4yuu:b1 (2.77) BS06 CLA ? GO:0009507 ... O19928 26757821
    155 4yuu:b1 (2.77) BS07 CLA ? GO:0009507 ... O19928 26757821
    156 4yuu:b1 (2.77) BS08 CLA ? GO:0009507 ... O19928 26757821
    157 4yuu:b1 (2.77) BS09 CLA ? GO:0009507 ... O19928 26757821
    158 4yuu:b1 (2.77) BS10 CLA ? GO:0009507 ... O19928 26757821
    159 4yuu:b1 (2.77) BS11 CLA ? GO:0009507 ... O19928 26757821
    160 4yuu:b1 (2.77) BS12 CLA ? GO:0009507 ... O19928 26757821
    161 4yuu:b1 (2.77) BS13 CLA ? GO:0009507 ... O19928 26757821
    162 4yuu:b1 (2.77) BS14 CLA ? GO:0009507 ... O19928 26757821
    163 4yuu:b1 (2.77) BS15 CLA ? GO:0009507 ... O19928 26757821
    164 4yuu:b1 (2.77) BS16 CLA ? GO:0009507 ... O19928 26757821
    165 4yuu:b2 (2.77) BS01 CLA ? GO:0009507 ... O19928 26757821
    166 4yuu:b2 (2.77) BS02 CLA ? GO:0009507 ... O19928 26757821
    167 4yuu:b2 (2.77) BS03 CLA ? GO:0009507 ... O19928 26757821
    168 4yuu:b2 (2.77) BS04 CLA ? GO:0009507 ... O19928 26757821
    169 4yuu:b2 (2.77) BS05 CLA ? GO:0009507 ... O19928 26757821
    170 4yuu:b2 (2.77) BS06 CLA ? GO:0009507 ... O19928 26757821
    171 4yuu:b2 (2.77) BS07 CLA ? GO:0009507 ... O19928 26757821
    172 4yuu:b2 (2.77) BS08 CLA ? GO:0009507 ... O19928 26757821
    173 4yuu:b2 (2.77) BS09 CLA ? GO:0009507 ... O19928 26757821
    174 4yuu:b2 (2.77) BS10 CLA ? GO:0009507 ... O19928 26757821
    175 4yuu:b2 (2.77) BS11 CLA ? GO:0009507 ... O19928 26757821
    176 4yuu:b2 (2.77) BS12 CLA ? GO:0009507 ... O19928 26757821
    177 4yuu:b2 (2.77) BS13 CLA ? GO:0009507 ... O19928 26757821
    178 4yuu:b2 (2.77) BS14 CLA ? GO:0009507 ... O19928 26757821
    179 4yuu:b2 (2.77) BS15 CLA ? GO:0009507 ... O19928 26757821
    180 4yuu:b2 (2.77) BS16 CLA ? GO:0009507 ... O19928 26757821
    181 4yuu:c1 (2.77) BS01 OEX ? GO:0005737 ... Q9TM46 26757821
    182 4yuu:c1 (2.77) BS02 CLA ? GO:0005737 ... Q9TM46 26757821
    183 4yuu:c1 (2.77) BS03 CLA ? GO:0005737 ... Q9TM46 26757821
    184 4yuu:c1 (2.77) BS04 CLA ? GO:0005737 ... Q9TM46 26757821
    185 4yuu:c1 (2.77) BS05 CLA ? GO:0005737 ... Q9TM46 26757821
    186 4yuu:c1 (2.77) BS06 CLA ? GO:0005737 ... Q9TM46 26757821
    187 4yuu:c1 (2.77) BS07 CLA ? GO:0005737 ... Q9TM46 26757821
    188 4yuu:c1 (2.77) BS08 CLA ? GO:0005737 ... Q9TM46 26757821
    189 4yuu:c1 (2.77) BS09 CLA ? GO:0005737 ... Q9TM46 26757821
    190 4yuu:c1 (2.77) BS10 CLA ? GO:0005737 ... Q9TM46 26757821
    191 4yuu:c1 (2.77) BS11 CLA ? GO:0005737 ... Q9TM46 26757821
    192 4yuu:c1 (2.77) BS12 CLA ? GO:0005737 ... Q9TM46 26757821
    193 4yuu:c1 (2.77) BS13 CLA ? GO:0005737 ... Q9TM46 26757821
    194 4yuu:c1 (2.77) BS14 CLA ? GO:0005737 ... Q9TM46 26757821
    195 4yuu:c2 (2.77) BS01 OEX ? GO:0005737 ... Q9TM46 26757821
    196 4yuu:c2 (2.77) BS02 CLA ? GO:0005737 ... Q9TM46 26757821
    197 4yuu:c2 (2.77) BS03 CLA ? GO:0005737 ... Q9TM46 26757821
    198 4yuu:c2 (2.77) BS04 CLA ? GO:0005737 ... Q9TM46 26757821
    199 4yuu:c2 (2.77) BS05 CLA ? GO:0005737 ... Q9TM46 26757821
    200 4yuu:c2 (2.77) BS06 CLA ? GO:0005737 ... Q9TM46 26757821

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218