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BioLiP Library
Download all results in tab-seperated text for 36 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1llu:A (2.3) BS01 ZN 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    2 1llu:A (2.3) BS02 ZN 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    3 1llu:A (2.3) BS03 NAD 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    4 1llu:A (2.3) BS04 EDO 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    5 1llu:A (2.3) BS05 EDO 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    6 1llu:B (2.3) BS01 ZN 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    7 1llu:B (2.3) BS02 ZN 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    8 1llu:B (2.3) BS03 NAD 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    9 1llu:B (2.3) BS04 EDO 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    10 1llu:C (2.3) BS01 ZN 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    11 1llu:C (2.3) BS02 ZN 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    12 1llu:C (2.3) BS03 NAD 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    13 1llu:C (2.3) BS04 EDO 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    14 1llu:C (2.3) BS05 EDO 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    15 1llu:D (2.3) BS01 ZN 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    16 1llu:D (2.3) BS02 ZN 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    17 1llu:D (2.3) BS03 NAD 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    18 1llu:D (2.3) BS04 EDO 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    19 1llu:E (2.3) BS01 ZN 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    20 1llu:E (2.3) BS02 ZN 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    21 1llu:E (2.3) BS03 NAD 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    22 1llu:E (2.3) BS04 EDO 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    23 1llu:E (2.3) BS05 EDO 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    24 1llu:F (2.3) BS01 ZN 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    25 1llu:F (2.3) BS02 ZN 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    26 1llu:F (2.3) BS03 NAD 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    27 1llu:F (2.3) BS04 EDO 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    28 1llu:G (2.3) BS01 ZN 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    29 1llu:G (2.3) BS02 ZN 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    30 1llu:G (2.3) BS03 NAD 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    31 1llu:G (2.3) BS04 EDO 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    32 1llu:G (2.3) BS05 EDO 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    33 1llu:H (2.3) BS01 ZN 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    34 1llu:H (2.3) BS02 ZN 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    35 1llu:H (2.3) BS03 NAD 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    36 1llu:H (2.3) BS04 EDO 1.1.1.1 GO:0000166 ... Q9HTD9 15152088
    Reference:
    • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
    • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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