Home Research COVID-19 Services Publications People Teaching Job Opening News Forum --> -->
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 903398 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 4498 4499 4500 4501 4502 4503 4504 4505 4506 4507 4508 4509 4510 4511 4512 4513 4514 4515 4516 4517 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    901401 9eut:B (2.95) BS01 LBV N/A N/A Q9HWR3 39216473
    901402 9euy:A (2.95) BS01 LBV N/A N/A Q9HWR3 39216473
    901403 9euy:B (2.95) BS01 LBV N/A N/A Q9HWR3 39216473
    901404 9ev3:A (1.219) BS01 FAD N/A N/A Q8NMG5 39080980
    901405 9ev3:A (1.219) BS02 TPP N/A N/A Q8NMG5 39080980
    901406 9ev3:A (1.219) BS03 MG N/A N/A Q8NMG5 39080980
    901407 9ev4:A (1.474) BS01 FAD N/A N/A Q8NMG5 39080980
    901408 9ev5:A (1.863) BS01 TPP N/A N/A Q8NMG5 39080980
    901409 9ev5:A (1.863) BS02 MG N/A N/A Q8NMG5 39080980
    901410 9ev5:A (1.863) BS03 FAD N/A N/A Q8NMG5 39080980
    901411 9ev5:A (1.863) BS04 TPP N/A N/A Q8NMG5 39080980
    901412 9ev5:B (1.863) BS01 TPP N/A N/A Q8NMG5 39080980
    901413 9ev5:B (1.863) BS02 TPP N/A N/A Q8NMG5 39080980
    901414 9ev5:B (1.863) BS03 MG N/A N/A Q8NMG5 39080980
    901415 9ev5:B (1.863) BS04 FAD N/A N/A Q8NMG5 39080980
    901416 9ev5:C (1.863) BS01 TPP N/A N/A Q8NMG5 39080980
    901417 9ev5:C (1.863) BS02 MG N/A N/A Q8NMG5 39080980
    901418 9ev5:C (1.863) BS03 FAD N/A N/A Q8NMG5 39080980
    901419 9ev5:C (1.863) BS04 TPP N/A N/A Q8NMG5 39080980
    901420 9ev5:D (1.863) BS01 TPP N/A N/A Q8NMG5 39080980
    901421 9ev5:D (1.863) BS02 TPP N/A N/A Q8NMG5 39080980
    901422 9ev5:D (1.863) BS03 MG N/A N/A Q8NMG5 39080980
    901423 9ev5:D (1.863) BS04 FAD N/A N/A Q8NMG5 39080980
    901424 9ev6:A (1.891) BS01 FAD N/A N/A Q8NMG5 39080980
    901425 9ev6:A (1.891) BS02 TPP N/A N/A Q8NMG5 39080980
    901426 9ev6:A (1.891) BS03 MG N/A N/A Q8NMG5 39080980
    901427 9ev6:A (1.891) BS04 TPP N/A N/A Q8NMG5 39080980
    901428 9ev6:B (1.891) BS01 TPP N/A N/A Q8NMG5 39080980
    901429 9ev6:B (1.891) BS02 FAD N/A N/A Q8NMG5 39080980
    901430 9ev6:B (1.891) BS03 TPP N/A N/A Q8NMG5 39080980
    901431 9ev6:B (1.891) BS04 MG N/A N/A Q8NMG5 39080980
    901432 9ev6:C (1.891) BS01 FAD N/A N/A Q8NMG5 39080980
    901433 9ev6:C (1.891) BS02 TPP N/A N/A Q8NMG5 39080980
    901434 9ev6:C (1.891) BS03 MG N/A N/A Q8NMG5 39080980
    901435 9ev6:C (1.891) BS04 TPP N/A N/A Q8NMG5 39080980
    901436 9ev6:D (1.891) BS01 TPP N/A N/A Q8NMG5 39080980
    901437 9ev6:D (1.891) BS02 FAD N/A N/A Q8NMG5 39080980
    901438 9ev6:D (1.891) BS03 TPP N/A N/A Q8NMG5 39080980
    901439 9ev6:D (1.891) BS04 MG N/A N/A Q8NMG5 39080980
    901440 9evm:A (1.8) BS01 FRU N/A N/A Q89EJ6 39002715
    901441 9evm:A (1.8) BS02 CU N/A N/A Q89EJ6 39002715
    901442 9evm:A (1.8) BS03 CU N/A N/A Q89EJ6 39002715
    901443 9evq:A (1.75) BS01 ACO N/A N/A Q38AU6 N/A
    901444 9evq:B (1.75) BS01 ACO N/A N/A Q38AU6 N/A
    901445 9evv:A (2.44) BS01 MG N/A N/A B5ZZ34 39126499
    901446 9evv:A (2.44) BS02 FES N/A N/A B5ZZ34 39126499
    901447 9evv:B (2.44) BS01 MG N/A N/A B5ZZ34 39126499
    901448 9evv:B (2.44) BS02 FES N/A N/A B5ZZ34 39126499
    901449 9evv:C (2.44) BS01 MG N/A N/A B5ZZ34 39126499
    901450 9evv:C (2.44) BS02 FES N/A N/A B5ZZ34 39126499
    901451 9evv:D (2.44) BS01 MG N/A N/A B5ZZ34 39126499
    901452 9evv:D (2.44) BS02 FES N/A N/A B5ZZ34 39126499
    901453 9evv:D (2.44) BS03 2KT N/A N/A B5ZZ34 39126499
    901454 9evx:A (1.71) BS01 FE2 1.10.3.9 GO:0005506 ... P0A444 38900892
    901455 9evx:A (1.71) BS02 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    901456 9evx:A (1.71) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    901457 9evx:A (1.71) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    901458 9evx:A (1.71) BS05 OEX 1.10.3.9 GO:0005506 ... P0A444 38900892
    901459 9evx:A (1.71) BS06 PHO 1.10.3.9 GO:0005506 ... P0A444 38900892
    901460 9evx:A (1.71) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    901461 9evx:A (1.71) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    901462 9evx:A (1.71) BS09 PHO 1.10.3.9 GO:0005506 ... P0A444 38900892
    901463 9evx:A (1.71) BS10 BCT 1.10.3.9 GO:0005506 ... P0A444 38900892
    901464 9evx:B (1.71) BS01 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901465 9evx:B (1.71) BS02 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901466 9evx:B (1.71) BS03 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901467 9evx:B (1.71) BS04 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901468 9evx:B (1.71) BS05 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901469 9evx:B (1.71) BS06 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901470 9evx:B (1.71) BS07 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901471 9evx:B (1.71) BS08 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901472 9evx:B (1.71) BS09 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901473 9evx:B (1.71) BS10 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901474 9evx:B (1.71) BS11 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901475 9evx:B (1.71) BS12 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901476 9evx:B (1.71) BS13 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901477 9evx:B (1.71) BS14 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901478 9evx:B (1.71) BS15 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901479 9evx:B (1.71) BS16 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901480 9evx:C (1.71) BS01 OEX ? GO:0005737 ... Q8DIF8 38900892
    901481 9evx:C (1.71) BS02 CLA ? GO:0005737 ... Q8DIF8 38900892
    901482 9evx:C (1.71) BS03 CLA ? GO:0005737 ... Q8DIF8 38900892
    901483 9evx:C (1.71) BS04 CLA ? GO:0005737 ... Q8DIF8 38900892
    901484 9evx:C (1.71) BS05 CLA ? GO:0005737 ... Q8DIF8 38900892
    901485 9evx:C (1.71) BS06 CLA ? GO:0005737 ... Q8DIF8 38900892
    901486 9evx:C (1.71) BS07 CLA ? GO:0005737 ... Q8DIF8 38900892
    901487 9evx:C (1.71) BS08 CLA ? GO:0005737 ... Q8DIF8 38900892
    901488 9evx:C (1.71) BS09 CLA ? GO:0005737 ... Q8DIF8 38900892
    901489 9evx:C (1.71) BS10 CLA ? GO:0005737 ... Q8DIF8 38900892
    901490 9evx:C (1.71) BS11 CLA ? GO:0005737 ... Q8DIF8 38900892
    901491 9evx:C (1.71) BS12 CLA ? GO:0005737 ... Q8DIF8 38900892
    901492 9evx:C (1.71) BS13 CLA ? GO:0005737 ... Q8DIF8 38900892
    901493 9evx:C (1.71) BS14 CLA ? GO:0005737 ... Q8DIF8 38900892
    901494 9evx:D (1.71) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901495 9evx:D (1.71) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901496 9evx:D (1.71) BS03 PHO 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901497 9evx:D (1.71) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901498 9evx:D (1.71) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901499 9evx:D (1.71) BS06 PHO 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901500 9evx:D (1.71) BS07 BCT 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901501 9evx:D (1.71) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901502 9evx:D (1.71) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901503 9evx:E (1.71) BS01 HEM ? GO:0005506 ... Q8DIP0 38900892
    901504 9evx:F (1.71) BS01 HEM ? GO:0005506 ... Q8DIN9 38900892
    901505 9evx:H (1.71) BS01 CLA ? GO:0009523 ... Q8DJ43 38900892
    901506 9evx:H (1.71) BS02 CLA ? GO:0009523 ... Q8DJ43 38900892
    901507 9evx:H (1.71) BS03 CLA ? GO:0009523 ... Q8DJ43 38900892
    901508 9evx:H (1.71) BS04 CLA ? GO:0009523 ... Q8DJ43 38900892
    901509 9evx:I (1.71) BS01 CLA ? GO:0005737 ... Q8DJZ6 38900892
    901510 9evx:K (1.71) BS01 peptide ? GO:0005737 ... Q9F1K9 38900892
    901511 9evx:K (1.71) BS02 CLA ? GO:0005737 ... Q9F1K9 38900892
    901512 9evx:K (1.71) BS03 CLA ? GO:0005737 ... Q9F1K9 38900892
    901513 9evx:V (1.71) BS01 HEC ? N/A P0A386 38900892
    901514 9evx:Z (1.71) BS01 peptide ? GO:0009523 ... Q8DHJ2 38900892
    901515 9evx:a (1.71) BS01 FE2 1.10.3.9 GO:0005506 ... P0A444 38900892
    901516 9evx:a (1.71) BS02 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    901517 9evx:a (1.71) BS03 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    901518 9evx:a (1.71) BS04 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    901519 9evx:a (1.71) BS05 OEX 1.10.3.9 GO:0005506 ... P0A444 38900892
    901520 9evx:a (1.71) BS06 PHO 1.10.3.9 GO:0005506 ... P0A444 38900892
    901521 9evx:a (1.71) BS07 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    901522 9evx:a (1.71) BS08 CLA 1.10.3.9 GO:0005506 ... P0A444 38900892
    901523 9evx:a (1.71) BS09 PHO 1.10.3.9 GO:0005506 ... P0A444 38900892
    901524 9evx:a (1.71) BS10 BCT 1.10.3.9 GO:0005506 ... P0A444 38900892
    901525 9evx:b (1.71) BS01 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901526 9evx:b (1.71) BS02 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901527 9evx:b (1.71) BS03 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901528 9evx:b (1.71) BS04 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901529 9evx:b (1.71) BS05 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901530 9evx:b (1.71) BS06 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901531 9evx:b (1.71) BS07 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901532 9evx:b (1.71) BS08 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901533 9evx:b (1.71) BS09 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901534 9evx:b (1.71) BS10 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901535 9evx:b (1.71) BS11 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901536 9evx:b (1.71) BS12 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901537 9evx:b (1.71) BS13 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901538 9evx:b (1.71) BS14 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901539 9evx:b (1.71) BS15 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901540 9evx:b (1.71) BS16 CLA ? GO:0009523 ... Q8DIQ1 38900892
    901541 9evx:c (1.71) BS01 OEX ? GO:0005737 ... Q8DIF8 38900892
    901542 9evx:c (1.71) BS02 CLA ? GO:0005737 ... Q8DIF8 38900892
    901543 9evx:c (1.71) BS03 CLA ? GO:0005737 ... Q8DIF8 38900892
    901544 9evx:c (1.71) BS04 CLA ? GO:0005737 ... Q8DIF8 38900892
    901545 9evx:c (1.71) BS05 CLA ? GO:0005737 ... Q8DIF8 38900892
    901546 9evx:c (1.71) BS06 CLA ? GO:0005737 ... Q8DIF8 38900892
    901547 9evx:c (1.71) BS07 CLA ? GO:0005737 ... Q8DIF8 38900892
    901548 9evx:c (1.71) BS08 CLA ? GO:0005737 ... Q8DIF8 38900892
    901549 9evx:c (1.71) BS09 CLA ? GO:0005737 ... Q8DIF8 38900892
    901550 9evx:c (1.71) BS10 CLA ? GO:0005737 ... Q8DIF8 38900892
    901551 9evx:c (1.71) BS11 CLA ? GO:0005737 ... Q8DIF8 38900892
    901552 9evx:c (1.71) BS12 CLA ? GO:0005737 ... Q8DIF8 38900892
    901553 9evx:c (1.71) BS13 CLA ? GO:0005737 ... Q8DIF8 38900892
    901554 9evx:c (1.71) BS14 CLA ? GO:0005737 ... Q8DIF8 38900892
    901555 9evx:d (1.71) BS01 FE2 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901556 9evx:d (1.71) BS02 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901557 9evx:d (1.71) BS03 PHO 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901558 9evx:d (1.71) BS04 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901559 9evx:d (1.71) BS05 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901560 9evx:d (1.71) BS06 PHO 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901561 9evx:d (1.71) BS07 BCT 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901562 9evx:d (1.71) BS08 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901563 9evx:d (1.71) BS09 CLA 1.10.3.9 GO:0005506 ... Q8CM25 38900892
    901564 9evx:e (1.71) BS01 HEM ? GO:0005506 ... Q8DIP0 38900892
    901565 9evx:f (1.71) BS01 HEM ? GO:0005506 ... Q8DIN9 38900892
    901566 9evx:h (1.71) BS01 CLA ? GO:0009523 ... Q8DJ43 38900892
    901567 9evx:h (1.71) BS02 CLA ? GO:0009523 ... Q8DJ43 38900892
    901568 9evx:h (1.71) BS03 CLA ? GO:0009523 ... Q8DJ43 38900892
    901569 9evx:h (1.71) BS04 CLA ? GO:0009523 ... Q8DJ43 38900892
    901570 9evx:i (1.71) BS01 CLA ? GO:0005737 ... Q8DJZ6 38900892
    901571 9evx:j (1.71) BS01 peptide ? GO:0009523 ... P59087 38900892
    901572 9evx:k (1.71) BS01 peptide ? GO:0005737 ... Q9F1K9 38900892
    901573 9evx:k (1.71) BS02 CLA ? GO:0005737 ... Q9F1K9 38900892
    901574 9evx:k (1.71) BS03 CLA ? GO:0005737 ... Q9F1K9 38900892
    901575 9evx:v (1.71) BS01 HEC ? N/A P0A386 38900892
    901576 9evx:z (1.71) BS01 peptide ? GO:0009523 ... Q8DHJ2 38900892
    901577 9ex0:A (1.45) BS01 NA N/A GO:0003796 ... P00698 38842919
    901578 9ex0:A (1.45) BS02 A1ICR N/A GO:0003796 ... P00698 38842919
    901579 9ex0:A (1.45) BS03 VO4 N/A GO:0003796 ... P00698 38842919
    901580 9ex1:A (1.785) BS01 A1H8D N/A GO:0003796 ... P00698 38842919
    901581 9ex2:A (1.172) BS01 NA N/A GO:0003796 ... P00698 38842919
    901582 9ex2:A (1.172) BS02 VO4 N/A GO:0003796 ... P00698 38842919
    901583 9ex2:A (1.172) BS03 A1H8D N/A GO:0003796 ... P00698 38842919
    901584 9ex2:A (1.172) BS04 A1H8D N/A GO:0003796 ... P00698 38842919
    901585 9ex2:A (1.172) BS05 VO4 N/A GO:0003796 ... P00698 38842919
    901586 9ex2:A (1.172) BS06 VO4 N/A GO:0003796 ... P00698 38842919
    901587 9exw:A (2.43) BS01 A1H7X 2.1.1.357 N/A O96028 38748070
    901588 9exw:B (2.43) BS01 A1H7X 2.1.1.357 N/A O96028 38748070
    901589 9exw:B (2.43) BS02 A1H7X 2.1.1.357 N/A O96028 38748070
    901590 9exx:A (1.943) BS01 A1H7Y 2.1.1.357 N/A O96028 38748070
    901591 9exx:B (1.943) BS01 A1H7Y 2.1.1.357 N/A O96028 38748070
    901592 9exx:B (1.943) BS02 A1H7Y 2.1.1.357 N/A O96028 38748070
    901593 9exy:A (1.699) BS01 A1H7Z 2.1.1.357 N/A O96028 38748070
    901594 9exy:B (1.699) BS01 A1H7Z 2.1.1.357 N/A O96028 38748070
    901595 9ey3:A (1.16) BS01 A1H70 5.2.1.8 N/A Q13451 38837733
    901596 9ey4:A (1.16) BS01 A1H78 5.2.1.8 N/A Q13451 38837733
    901597 9ey5:A (2.61) BS01 OTY 1.14.18.- N/A P17643 38642076
    901598 9ey5:A (2.61) BS02 ZN 1.14.18.- N/A P17643 38642076
    901599 9ey5:A (2.61) BS03 ZN 1.14.18.- N/A P17643 38642076
    901600 9ey5:A (2.61) BS04 ZN 1.14.18.- N/A P17643 38642076
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218