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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 903398 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    893601 8xr6:3 (2.53) BS20 II0 N/A N/A N/A N/A
    893602 8xr6:3 (2.53) BS21 IHT N/A N/A N/A N/A
    893603 8xr6:4 (2.53) BS01 CLA N/A N/A N/A N/A
    893604 8xr6:4 (2.53) BS02 CLA N/A N/A N/A N/A
    893605 8xr6:4 (2.53) BS03 CLA N/A N/A N/A N/A
    893606 8xr6:4 (2.53) BS04 CLA N/A N/A N/A N/A
    893607 8xr6:4 (2.53) BS05 KC2 N/A N/A N/A N/A
    893608 8xr6:4 (2.53) BS06 CLA N/A N/A N/A N/A
    893609 8xr6:4 (2.53) BS07 CLA N/A N/A N/A N/A
    893610 8xr6:4 (2.53) BS08 CLA N/A N/A N/A N/A
    893611 8xr6:4 (2.53) BS09 CLA N/A N/A N/A N/A
    893612 8xr6:4 (2.53) BS10 CLA N/A N/A N/A N/A
    893613 8xr6:4 (2.53) BS11 8CT N/A N/A N/A N/A
    893614 8xr6:4 (2.53) BS12 II0 N/A N/A N/A N/A
    893615 8xr6:4 (2.53) BS13 II0 N/A N/A N/A N/A
    893616 8xr6:4 (2.53) BS14 II0 N/A N/A N/A N/A
    893617 8xr6:4 (2.53) BS15 II0 N/A N/A N/A N/A
    893618 8xr6:4 (2.53) BS16 CLA N/A N/A N/A N/A
    893619 8xr6:4 (2.53) BS17 II0 N/A N/A N/A N/A
    893620 8xr6:4 (2.53) BS18 CLA N/A N/A N/A N/A
    893621 8xr6:5 (2.53) BS01 CLA N/A N/A N/A N/A
    893622 8xr6:5 (2.53) BS02 II0 N/A N/A N/A N/A
    893623 8xr6:5 (2.53) BS03 CLA N/A N/A N/A N/A
    893624 8xr6:5 (2.53) BS04 CLA N/A N/A N/A N/A
    893625 8xr6:5 (2.53) BS05 CLA N/A N/A N/A N/A
    893626 8xr6:5 (2.53) BS06 CLA N/A N/A N/A N/A
    893627 8xr6:5 (2.53) BS07 CLA N/A N/A N/A N/A
    893628 8xr6:5 (2.53) BS08 CLA N/A N/A N/A N/A
    893629 8xr6:5 (2.53) BS09 CLA N/A N/A N/A N/A
    893630 8xr6:5 (2.53) BS10 CLA N/A N/A N/A N/A
    893631 8xr6:5 (2.53) BS11 KC2 N/A N/A N/A N/A
    893632 8xr6:5 (2.53) BS12 CLA N/A N/A N/A N/A
    893633 8xr6:5 (2.53) BS13 CLA N/A N/A N/A N/A
    893634 8xr6:5 (2.53) BS14 II0 N/A N/A N/A N/A
    893635 8xr6:5 (2.53) BS15 II0 N/A N/A N/A N/A
    893636 8xr6:5 (2.53) BS16 II0 N/A N/A N/A N/A
    893637 8xr6:5 (2.53) BS17 IHT N/A N/A N/A N/A
    893638 8xr6:5 (2.53) BS18 II0 N/A N/A N/A N/A
    893639 8xr6:6 (2.53) BS01 CLA N/A N/A N/A N/A
    893640 8xr6:6 (2.53) BS02 II0 N/A N/A N/A N/A
    893641 8xr6:6 (2.53) BS03 CLA N/A N/A N/A N/A
    893642 8xr6:6 (2.53) BS04 CLA N/A N/A N/A N/A
    893643 8xr6:6 (2.53) BS05 CLA N/A N/A N/A N/A
    893644 8xr6:6 (2.53) BS06 CLA N/A N/A N/A N/A
    893645 8xr6:6 (2.53) BS07 CLA N/A N/A N/A N/A
    893646 8xr6:6 (2.53) BS08 CLA N/A N/A N/A N/A
    893647 8xr6:6 (2.53) BS09 CLA N/A N/A N/A N/A
    893648 8xr6:6 (2.53) BS10 CLA N/A N/A N/A N/A
    893649 8xr6:6 (2.53) BS11 CLA N/A N/A N/A N/A
    893650 8xr6:6 (2.53) BS12 KC2 N/A N/A N/A N/A
    893651 8xr6:6 (2.53) BS13 CLA N/A N/A N/A N/A
    893652 8xr6:6 (2.53) BS14 CLA N/A N/A N/A N/A
    893653 8xr6:6 (2.53) BS15 II0 N/A N/A N/A N/A
    893654 8xr6:6 (2.53) BS16 II0 N/A N/A N/A N/A
    893655 8xr6:6 (2.53) BS17 II0 N/A N/A N/A N/A
    893656 8xr6:6 (2.53) BS18 II0 N/A N/A N/A N/A
    893657 8xr6:6 (2.53) BS19 IHT N/A N/A N/A N/A
    893658 8xr6:6 (2.53) BS20 CLA N/A N/A N/A N/A
    893659 8xr6:7 (2.53) BS01 CLA N/A N/A N/A N/A
    893660 8xr6:7 (2.53) BS02 CLA N/A N/A N/A N/A
    893661 8xr6:7 (2.53) BS03 CLA N/A N/A N/A N/A
    893662 8xr6:7 (2.53) BS04 CLA N/A N/A N/A N/A
    893663 8xr6:7 (2.53) BS05 CLA N/A N/A N/A N/A
    893664 8xr6:7 (2.53) BS06 CLA N/A N/A N/A N/A
    893665 8xr6:7 (2.53) BS07 CLA N/A N/A N/A N/A
    893666 8xr6:7 (2.53) BS08 CLA N/A N/A N/A N/A
    893667 8xr6:7 (2.53) BS09 CLA N/A N/A N/A N/A
    893668 8xr6:7 (2.53) BS10 KC2 N/A N/A N/A N/A
    893669 8xr6:7 (2.53) BS11 KC2 N/A N/A N/A N/A
    893670 8xr6:7 (2.53) BS12 8CT N/A N/A N/A N/A
    893671 8xr6:7 (2.53) BS13 II0 N/A N/A N/A N/A
    893672 8xr6:7 (2.53) BS14 II0 N/A N/A N/A N/A
    893673 8xr6:7 (2.53) BS15 II0 N/A N/A N/A N/A
    893674 8xr6:7 (2.53) BS16 II0 N/A N/A N/A N/A
    893675 8xr6:7 (2.53) BS17 CLA N/A N/A N/A N/A
    893676 8xr6:8 (2.53) BS01 CLA N/A N/A N/A N/A
    893677 8xr6:8 (2.53) BS02 CLA N/A N/A N/A N/A
    893678 8xr6:8 (2.53) BS03 8CT N/A N/A N/A N/A
    893679 8xr6:8 (2.53) BS04 II0 N/A N/A N/A N/A
    893680 8xr6:8 (2.53) BS05 CLA N/A N/A N/A N/A
    893681 8xr6:8 (2.53) BS06 CLA N/A N/A N/A N/A
    893682 8xr6:8 (2.53) BS07 CLA N/A N/A N/A N/A
    893683 8xr6:8 (2.53) BS08 CLA N/A N/A N/A N/A
    893684 8xr6:8 (2.53) BS09 CLA N/A N/A N/A N/A
    893685 8xr6:8 (2.53) BS10 CLA N/A N/A N/A N/A
    893686 8xr6:8 (2.53) BS11 CLA N/A N/A N/A N/A
    893687 8xr6:8 (2.53) BS12 CLA N/A N/A N/A N/A
    893688 8xr6:8 (2.53) BS13 KC2 N/A N/A N/A N/A
    893689 8xr6:8 (2.53) BS14 CLA N/A N/A N/A N/A
    893690 8xr6:8 (2.53) BS15 II0 N/A N/A N/A N/A
    893691 8xr6:8 (2.53) BS16 II0 N/A N/A N/A N/A
    893692 8xr6:8 (2.53) BS17 II0 N/A N/A N/A N/A
    893693 8xr6:8 (2.53) BS18 IHT N/A N/A N/A N/A
    893694 8xr6:8 (2.53) BS19 II0 N/A N/A N/A N/A
    893695 8xr6:8 (2.53) BS20 CLA N/A N/A N/A N/A
    893696 8xr6:8 (2.53) BS21 CLA N/A N/A N/A N/A
    893697 8xr6:8 (2.53) BS22 II0 N/A N/A N/A N/A
    893698 8xr6:8 (2.53) BS23 CLA N/A N/A N/A N/A
    893699 8xr6:8 (2.53) BS24 CLA N/A N/A N/A N/A
    893700 8xr6:8 (2.53) BS25 CLA N/A N/A N/A N/A
    893701 8xr6:9 (2.53) BS01 CLA N/A N/A N/A N/A
    893702 8xr6:9 (2.53) BS02 IHT N/A N/A N/A N/A
    893703 8xr6:9 (2.53) BS03 II0 N/A N/A N/A N/A
    893704 8xr6:9 (2.53) BS04 CLA N/A N/A N/A N/A
    893705 8xr6:9 (2.53) BS05 CLA N/A N/A N/A N/A
    893706 8xr6:9 (2.53) BS06 CLA N/A N/A N/A N/A
    893707 8xr6:9 (2.53) BS07 CLA N/A N/A N/A N/A
    893708 8xr6:9 (2.53) BS08 CLA N/A N/A N/A N/A
    893709 8xr6:9 (2.53) BS09 CLA N/A N/A N/A N/A
    893710 8xr6:9 (2.53) BS10 CLA N/A N/A N/A N/A
    893711 8xr6:9 (2.53) BS11 CLA N/A N/A N/A N/A
    893712 8xr6:9 (2.53) BS12 KC2 N/A N/A N/A N/A
    893713 8xr6:9 (2.53) BS13 CLA N/A N/A N/A N/A
    893714 8xr6:9 (2.53) BS14 CLA N/A N/A N/A N/A
    893715 8xr6:9 (2.53) BS15 CLA N/A N/A N/A N/A
    893716 8xr6:9 (2.53) BS16 CLA N/A N/A N/A N/A
    893717 8xr6:9 (2.53) BS17 II0 N/A N/A N/A N/A
    893718 8xr6:9 (2.53) BS18 II0 N/A N/A N/A N/A
    893719 8xr6:9 (2.53) BS19 II0 N/A N/A N/A N/A
    893720 8xr6:9 (2.53) BS20 II0 N/A N/A N/A N/A
    893721 8xr6:9 (2.53) BS21 IHT N/A N/A N/A N/A
    893722 8xr6:A (2.53) BS01 peptide N/A GO:0005506 ... A0A222AI41 N/A
    893723 8xr6:A (2.53) BS02 OEX N/A GO:0005506 ... A0A222AI41 N/A
    893724 8xr6:A (2.53) BS03 FE2 N/A GO:0005506 ... A0A222AI41 N/A
    893725 8xr6:A (2.53) BS04 BCT N/A GO:0005506 ... A0A222AI41 N/A
    893726 8xr6:A (2.53) BS05 CLA N/A GO:0005506 ... A0A222AI41 N/A
    893727 8xr6:A (2.53) BS06 CLA N/A GO:0005506 ... A0A222AI41 N/A
    893728 8xr6:A (2.53) BS07 PHO N/A GO:0005506 ... A0A222AI41 N/A
    893729 8xr6:A (2.53) BS08 CLA N/A GO:0005506 ... A0A222AI41 N/A
    893730 8xr6:A (2.53) BS09 8CT N/A GO:0005506 ... A0A222AI41 N/A
    893731 8xr6:A (2.53) BS10 CLA N/A GO:0005506 ... A0A222AI41 N/A
    893732 8xr6:A (2.53) BS11 CLA N/A GO:0005506 ... A0A222AI41 N/A
    893733 8xr6:A (2.53) BS12 PHO N/A GO:0005506 ... A0A222AI41 N/A
    893734 8xr6:B (2.53) BS01 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    893735 8xr6:B (2.53) BS02 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    893736 8xr6:B (2.53) BS03 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    893737 8xr6:B (2.53) BS04 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    893738 8xr6:B (2.53) BS05 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    893739 8xr6:B (2.53) BS06 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    893740 8xr6:B (2.53) BS07 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    893741 8xr6:B (2.53) BS08 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    893742 8xr6:B (2.53) BS09 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    893743 8xr6:B (2.53) BS10 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    893744 8xr6:B (2.53) BS11 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    893745 8xr6:B (2.53) BS12 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    893746 8xr6:B (2.53) BS13 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    893747 8xr6:B (2.53) BS14 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    893748 8xr6:B (2.53) BS15 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    893749 8xr6:B (2.53) BS16 CLA N/A GO:0009523 ... A0A222AIE3 N/A
    893750 8xr6:B (2.53) BS17 8CT N/A GO:0009523 ... A0A222AIE3 N/A
    893751 8xr6:B (2.53) BS18 8CT N/A GO:0009523 ... A0A222AIE3 N/A
    893752 8xr6:B (2.53) BS19 8CT N/A GO:0009523 ... A0A222AIE3 N/A
    893753 8xr6:C (2.53) BS01 OEX N/A GO:0005737 ... A0A222AI36 N/A
    893754 8xr6:C (2.53) BS02 CLA N/A GO:0005737 ... A0A222AI36 N/A
    893755 8xr6:C (2.53) BS03 CLA N/A GO:0005737 ... A0A222AI36 N/A
    893756 8xr6:C (2.53) BS04 CLA N/A GO:0005737 ... A0A222AI36 N/A
    893757 8xr6:C (2.53) BS05 CLA N/A GO:0005737 ... A0A222AI36 N/A
    893758 8xr6:C (2.53) BS06 CLA N/A GO:0005737 ... A0A222AI36 N/A
    893759 8xr6:C (2.53) BS07 CLA N/A GO:0005737 ... A0A222AI36 N/A
    893760 8xr6:C (2.53) BS08 CLA N/A GO:0005737 ... A0A222AI36 N/A
    893761 8xr6:C (2.53) BS09 CLA N/A GO:0005737 ... A0A222AI36 N/A
    893762 8xr6:C (2.53) BS10 CLA N/A GO:0005737 ... A0A222AI36 N/A
    893763 8xr6:C (2.53) BS11 CLA N/A GO:0005737 ... A0A222AI36 N/A
    893764 8xr6:C (2.53) BS12 CLA N/A GO:0005737 ... A0A222AI36 N/A
    893765 8xr6:C (2.53) BS13 CLA N/A GO:0005737 ... A0A222AI36 N/A
    893766 8xr6:C (2.53) BS14 CLA N/A GO:0005737 ... A0A222AI36 N/A
    893767 8xr6:C (2.53) BS15 8CT N/A GO:0005737 ... A0A222AI36 N/A
    893768 8xr6:C (2.53) BS16 8CT N/A GO:0005737 ... A0A222AI36 N/A
    893769 8xr6:C (2.53) BS17 8CT N/A GO:0005737 ... A0A222AI36 N/A
    893770 8xr6:D (2.53) BS01 peptide N/A GO:0005506 ... A0A222AI37 N/A
    893771 8xr6:D (2.53) BS02 FE2 N/A GO:0005506 ... A0A222AI37 N/A
    893772 8xr6:D (2.53) BS03 BCT N/A GO:0005506 ... A0A222AI37 N/A
    893773 8xr6:D (2.53) BS04 CLA N/A GO:0005506 ... A0A222AI37 N/A
    893774 8xr6:D (2.53) BS05 CLA N/A GO:0005506 ... A0A222AI37 N/A
    893775 8xr6:D (2.53) BS06 PHO N/A GO:0005506 ... A0A222AI37 N/A
    893776 8xr6:D (2.53) BS07 CLA N/A GO:0005506 ... A0A222AI37 N/A
    893777 8xr6:D (2.53) BS08 CLA N/A GO:0005506 ... A0A222AI37 N/A
    893778 8xr6:D (2.53) BS09 PHO N/A GO:0005506 ... A0A222AI37 N/A
    893779 8xr6:D (2.53) BS10 CLA N/A GO:0005506 ... A0A222AI37 N/A
    893780 8xr6:D (2.53) BS11 CLA N/A GO:0005506 ... A0A222AI37 N/A
    893781 8xr6:D (2.53) BS12 8CT N/A GO:0005506 ... A0A222AI37 N/A
    893782 8xr6:E (2.53) BS01 peptide N/A GO:0005506 ... A0A222AI74 N/A
    893783 8xr6:E (2.53) BS02 HEM N/A GO:0005506 ... A0A222AI74 N/A
    893784 8xr6:H (2.53) BS01 CLA N/A GO:0009523 ... A0A222AIE4 N/A
    893785 8xr6:H (2.53) BS02 CLA N/A GO:0009523 ... A0A222AIE4 N/A
    893786 8xr6:H (2.53) BS03 CLA N/A GO:0009523 ... A0A222AIE4 N/A
    893787 8xr6:H (2.53) BS04 CLA N/A GO:0009523 ... A0A222AIE4 N/A
    893788 8xr6:H (2.53) BS05 CLA N/A GO:0009523 ... A0A222AIE4 N/A
    893789 8xr6:H (2.53) BS06 8CT N/A GO:0009523 ... A0A222AIE4 N/A
    893790 8xr6:I (2.53) BS01 CLA N/A GO:0005737 ... A0A222AI80 N/A
    893791 8xr6:I (2.53) BS02 CLA N/A GO:0005737 ... A0A222AI80 N/A
    893792 8xr6:J (2.53) BS01 peptide N/A GO:0009523 ... A0A222AI54 N/A
    893793 8xr6:K (2.53) BS01 CLA N/A GO:0005737 ... A0A222AIA0 N/A
    893794 8xr6:K (2.53) BS02 8CT N/A GO:0005737 ... A0A222AIA0 N/A
    893795 8xr6:K (2.53) BS03 8CT N/A GO:0005737 ... A0A222AIA0 N/A
    893796 8xr6:N (2.53) BS01 CLA N/A N/A N/A N/A
    893797 8xr6:N (2.53) BS02 CLA N/A N/A N/A N/A
    893798 8xr6:N (2.53) BS03 CLA N/A N/A N/A N/A
    893799 8xr6:N (2.53) BS04 CLA N/A N/A N/A N/A
    893800 8xr6:N (2.53) BS05 CLA N/A N/A N/A N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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