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BioLiP
Download all results in tab-seperated text for 903398 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    893001 8xlp:D (2.57) BS02 CLA N/A GO:0005506 ... A6MVR3 N/A
    893002 8xlp:D (2.57) BS03 PHO N/A GO:0005506 ... A6MVR3 N/A
    893003 8xlp:D (2.57) BS04 BCT N/A GO:0005506 ... A6MVR3 N/A
    893004 8xlp:D (2.57) BS05 CLA N/A GO:0005506 ... A6MVR3 N/A
    893005 8xlp:D (2.57) BS06 CLA N/A GO:0005506 ... A6MVR3 N/A
    893006 8xlp:D (2.57) BS07 PHO N/A GO:0005506 ... A6MVR3 N/A
    893007 8xlp:D (2.57) BS08 CLA N/A GO:0005506 ... A6MVR3 N/A
    893008 8xlp:D (2.57) BS09 CLA N/A GO:0005506 ... A6MVR3 N/A
    893009 8xlp:D (2.57) BS10 WVN N/A GO:0005506 ... A6MVR3 N/A
    893010 8xlp:E (2.57) BS01 HEM N/A GO:0005506 ... A6MVV5 N/A
    893011 8xlp:F (2.57) BS01 WVN N/A GO:0005506 ... A6MVV4 N/A
    893012 8xlp:F (2.57) BS02 HEM N/A GO:0005506 ... A6MVV4 N/A
    893013 8xlp:G (2.57) BS01 CLA N/A N/A N/A N/A
    893014 8xlp:G (2.57) BS02 CLA N/A N/A N/A N/A
    893015 8xlp:G (2.57) BS03 CLA N/A N/A N/A N/A
    893016 8xlp:G (2.57) BS04 CLA N/A N/A N/A N/A
    893017 8xlp:G (2.57) BS05 CLA N/A N/A N/A N/A
    893018 8xlp:G (2.57) BS06 CLA N/A N/A N/A N/A
    893019 8xlp:G (2.57) BS07 CLA N/A N/A N/A N/A
    893020 8xlp:G (2.57) BS08 CLA N/A N/A N/A N/A
    893021 8xlp:H (2.57) BS01 CLA N/A GO:0009507 ... A6MW35 N/A
    893022 8xlp:H (2.57) BS02 CLA N/A GO:0009507 ... A6MW35 N/A
    893023 8xlp:H (2.57) BS03 CLA N/A GO:0009507 ... A6MW35 N/A
    893024 8xlp:H (2.57) BS04 CLA N/A GO:0009507 ... A6MW35 N/A
    893025 8xlp:H (2.57) BS05 WVN N/A GO:0009507 ... A6MW35 N/A
    893026 8xlp:I (2.57) BS01 CLA N/A GO:0005737 ... A6MVW0 N/A
    893027 8xlp:I (2.57) BS02 WVN N/A GO:0005737 ... A6MVW0 N/A
    893028 8xlp:K (2.57) BS01 CLA N/A GO:0005737 ... A6MVZ3 N/A
    893029 8xlp:K (2.57) BS02 CLA N/A GO:0005737 ... A6MVZ3 N/A
    893030 8xlp:K (2.57) BS03 WVN N/A GO:0005737 ... A6MVZ3 N/A
    893031 8xlp:K (2.57) BS04 WVN N/A GO:0005737 ... A6MVZ3 N/A
    893032 8xlp:L (2.57) BS01 CLA N/A GO:0005737 ... A6MVV3 N/A
    893033 8xlp:N (2.57) BS01 II0 N/A N/A N/A N/A
    893034 8xlp:N (2.57) BS02 CLA N/A N/A N/A N/A
    893035 8xlp:N (2.57) BS03 CLA N/A N/A N/A N/A
    893036 8xlp:N (2.57) BS04 CLA N/A N/A N/A N/A
    893037 8xlp:N (2.57) BS05 CLA N/A N/A N/A N/A
    893038 8xlp:N (2.57) BS06 KC2 N/A N/A N/A N/A
    893039 8xlp:N (2.57) BS07 CLA N/A N/A N/A N/A
    893040 8xlp:N (2.57) BS08 CLA N/A N/A N/A N/A
    893041 8xlp:N (2.57) BS09 CLA N/A N/A N/A N/A
    893042 8xlp:N (2.57) BS10 CLA N/A N/A N/A N/A
    893043 8xlp:N (2.57) BS11 KC2 N/A N/A N/A N/A
    893044 8xlp:N (2.57) BS12 KC2 N/A N/A N/A N/A
    893045 8xlp:N (2.57) BS13 KC2 N/A N/A N/A N/A
    893046 8xlp:N (2.57) BS14 CLA N/A N/A N/A N/A
    893047 8xlp:N (2.57) BS15 CLA N/A N/A N/A N/A
    893048 8xlp:N (2.57) BS16 II0 N/A N/A N/A N/A
    893049 8xlp:N (2.57) BS17 II0 N/A N/A N/A N/A
    893050 8xlp:N (2.57) BS18 II0 N/A N/A N/A N/A
    893051 8xlp:N (2.57) BS19 II0 N/A N/A N/A N/A
    893052 8xlp:N (2.57) BS20 IHT N/A N/A N/A N/A
    893053 8xlp:O (2.57) BS01 CLA N/A N/A N/A N/A
    893054 8xlp:O (2.57) BS02 CLA N/A N/A N/A N/A
    893055 8xlp:O (2.57) BS03 CLA N/A N/A N/A N/A
    893056 8xlp:O (2.57) BS04 CLA N/A N/A N/A N/A
    893057 8xlp:O (2.57) BS05 CLA N/A N/A N/A N/A
    893058 8xlp:O (2.57) BS06 CLA N/A N/A N/A N/A
    893059 8xlp:O (2.57) BS07 CLA N/A N/A N/A N/A
    893060 8xlp:O (2.57) BS08 CLA N/A N/A N/A N/A
    893061 8xlp:O (2.57) BS09 CLA N/A N/A N/A N/A
    893062 8xlp:O (2.57) BS10 KC2 N/A N/A N/A N/A
    893063 8xlp:O (2.57) BS11 CLA N/A N/A N/A N/A
    893064 8xlp:O (2.57) BS12 CLA N/A N/A N/A N/A
    893065 8xlp:O (2.57) BS13 II0 N/A N/A N/A N/A
    893066 8xlp:O (2.57) BS14 II0 N/A N/A N/A N/A
    893067 8xlp:O (2.57) BS15 II0 N/A N/A N/A N/A
    893068 8xlp:O (2.57) BS16 II0 N/A N/A N/A N/A
    893069 8xlp:O (2.57) BS17 IHT N/A N/A N/A N/A
    893070 8xlp:O (2.57) BS18 II0 N/A N/A N/A N/A
    893071 8xlp:P (2.57) BS01 CLA N/A N/A N/A N/A
    893072 8xlp:P (2.57) BS02 CLA N/A N/A N/A N/A
    893073 8xlp:P (2.57) BS03 CLA N/A N/A N/A N/A
    893074 8xlp:P (2.57) BS04 CLA N/A N/A N/A N/A
    893075 8xlp:P (2.57) BS05 KC2 N/A N/A N/A N/A
    893076 8xlp:P (2.57) BS06 CLA N/A N/A N/A N/A
    893077 8xlp:P (2.57) BS07 CLA N/A N/A N/A N/A
    893078 8xlp:P (2.57) BS08 CLA N/A N/A N/A N/A
    893079 8xlp:P (2.57) BS09 CLA N/A N/A N/A N/A
    893080 8xlp:P (2.57) BS10 CLA N/A N/A N/A N/A
    893081 8xlp:P (2.57) BS11 CLA N/A N/A N/A N/A
    893082 8xlp:P (2.57) BS12 II0 N/A N/A N/A N/A
    893083 8xlp:P (2.57) BS13 II0 N/A N/A N/A N/A
    893084 8xlp:P (2.57) BS14 II0 N/A N/A N/A N/A
    893085 8xlp:P (2.57) BS15 II0 N/A N/A N/A N/A
    893086 8xlp:P (2.57) BS16 WVN N/A N/A N/A N/A
    893087 8xlp:Q (2.57) BS01 CLA N/A N/A N/A N/A
    893088 8xlp:Q (2.57) BS02 CLA N/A N/A N/A N/A
    893089 8xlp:Q (2.57) BS03 CLA N/A N/A N/A N/A
    893090 8xlp:Q (2.57) BS04 KC2 N/A N/A N/A N/A
    893091 8xlp:Q (2.57) BS05 CLA N/A N/A N/A N/A
    893092 8xlp:Q (2.57) BS06 CLA N/A N/A N/A N/A
    893093 8xlp:Q (2.57) BS07 CLA N/A N/A N/A N/A
    893094 8xlp:Q (2.57) BS08 CLA N/A N/A N/A N/A
    893095 8xlp:Q (2.57) BS09 KC2 N/A N/A N/A N/A
    893096 8xlp:Q (2.57) BS10 CLA N/A N/A N/A N/A
    893097 8xlp:Q (2.57) BS11 CLA N/A N/A N/A N/A
    893098 8xlp:Q (2.57) BS12 II0 N/A N/A N/A N/A
    893099 8xlp:Q (2.57) BS13 II0 N/A N/A N/A N/A
    893100 8xlp:Q (2.57) BS14 II0 N/A N/A N/A N/A
    893101 8xlp:Q (2.57) BS15 II0 N/A N/A N/A N/A
    893102 8xlp:Q (2.57) BS16 IHT N/A N/A N/A N/A
    893103 8xlp:Q (2.57) BS17 II0 N/A N/A N/A N/A
    893104 8xlp:Q (2.57) BS18 IHT N/A N/A N/A N/A
    893105 8xlp:R (2.57) BS01 CLA N/A N/A N/A N/A
    893106 8xlp:R (2.57) BS02 CLA N/A N/A N/A N/A
    893107 8xlp:R (2.57) BS03 II0 N/A N/A N/A N/A
    893108 8xlp:R (2.57) BS04 CLA N/A N/A N/A N/A
    893109 8xlp:R (2.57) BS05 CLA N/A N/A N/A N/A
    893110 8xlp:R (2.57) BS06 CLA N/A N/A N/A N/A
    893111 8xlp:R (2.57) BS07 CLA N/A N/A N/A N/A
    893112 8xlp:R (2.57) BS08 CLA N/A N/A N/A N/A
    893113 8xlp:R (2.57) BS09 CLA N/A N/A N/A N/A
    893114 8xlp:R (2.57) BS10 CLA N/A N/A N/A N/A
    893115 8xlp:R (2.57) BS11 CLA N/A N/A N/A N/A
    893116 8xlp:R (2.57) BS12 CLA N/A N/A N/A N/A
    893117 8xlp:R (2.57) BS13 KC2 N/A N/A N/A N/A
    893118 8xlp:R (2.57) BS14 CLA N/A N/A N/A N/A
    893119 8xlp:R (2.57) BS15 CLA N/A N/A N/A N/A
    893120 8xlp:R (2.57) BS16 II0 N/A N/A N/A N/A
    893121 8xlp:R (2.57) BS17 II0 N/A N/A N/A N/A
    893122 8xlp:R (2.57) BS18 II0 N/A N/A N/A N/A
    893123 8xlp:R (2.57) BS19 II0 N/A N/A N/A N/A
    893124 8xlp:R (2.57) BS20 IHT N/A N/A N/A N/A
    893125 8xlp:R (2.57) BS21 CLA N/A N/A N/A N/A
    893126 8xlp:R (2.57) BS22 II0 N/A N/A N/A N/A
    893127 8xlp:S (2.57) BS01 CLA N/A N/A N/A N/A
    893128 8xlp:S (2.57) BS02 CLA N/A N/A N/A N/A
    893129 8xlp:S (2.57) BS03 CLA N/A N/A N/A N/A
    893130 8xlp:S (2.57) BS04 CLA N/A N/A N/A N/A
    893131 8xlp:S (2.57) BS05 KC2 N/A N/A N/A N/A
    893132 8xlp:S (2.57) BS06 CLA N/A N/A N/A N/A
    893133 8xlp:S (2.57) BS07 CLA N/A N/A N/A N/A
    893134 8xlp:S (2.57) BS08 CLA N/A N/A N/A N/A
    893135 8xlp:S (2.57) BS09 KC2 N/A N/A N/A N/A
    893136 8xlp:S (2.57) BS10 CLA N/A N/A N/A N/A
    893137 8xlp:S (2.57) BS11 CLA N/A N/A N/A N/A
    893138 8xlp:S (2.57) BS12 II0 N/A N/A N/A N/A
    893139 8xlp:S (2.57) BS13 II0 N/A N/A N/A N/A
    893140 8xlp:S (2.57) BS14 II0 N/A N/A N/A N/A
    893141 8xlp:S (2.57) BS15 II0 N/A N/A N/A N/A
    893142 8xlp:S (2.57) BS16 WVN N/A N/A N/A N/A
    893143 8xlp:W (2.57) BS01 CLA N/A N/A N/A N/A
    893144 8xlp:X (2.57) BS01 CLA N/A GO:0009507 ... A6MVU5 N/A
    893145 8xlp:Y (2.57) BS01 WVN N/A GO:0009507 ... A6MVU9 N/A
    893146 8xlp:Z (2.57) BS01 KC2 N/A N/A A6MVZ2 N/A
    893147 8xlp:a (2.57) BS01 FE2 N/A GO:0005506 ... A6MVT2 N/A
    893148 8xlp:a (2.57) BS02 CLA N/A GO:0005506 ... A6MVT2 N/A
    893149 8xlp:a (2.57) BS03 CLA N/A GO:0005506 ... A6MVT2 N/A
    893150 8xlp:a (2.57) BS04 PHO N/A GO:0005506 ... A6MVT2 N/A
    893151 8xlp:a (2.57) BS05 CLA N/A GO:0005506 ... A6MVT2 N/A
    893152 8xlp:a (2.57) BS06 WVN N/A GO:0005506 ... A6MVT2 N/A
    893153 8xlp:a (2.57) BS07 BCT N/A GO:0005506 ... A6MVT2 N/A
    893154 8xlp:a (2.57) BS08 MN N/A GO:0005506 ... A6MVT2 N/A
    893155 8xlp:a (2.57) BS09 MN N/A GO:0005506 ... A6MVT2 N/A
    893156 8xlp:a (2.57) BS10 CLA N/A GO:0005506 ... A6MVT2 N/A
    893157 8xlp:a (2.57) BS11 CLA N/A GO:0005506 ... A6MVT2 N/A
    893158 8xlp:a (2.57) BS12 PHO N/A GO:0005506 ... A6MVT2 N/A
    893159 8xlp:a (2.57) BS13 CLA N/A GO:0005506 ... A6MVT2 N/A
    893160 8xlp:b (2.57) BS01 CLA N/A GO:0009507 ... A6MW31 N/A
    893161 8xlp:b (2.57) BS02 CLA N/A GO:0009507 ... A6MW31 N/A
    893162 8xlp:b (2.57) BS03 CLA N/A GO:0009507 ... A6MW31 N/A
    893163 8xlp:b (2.57) BS04 CLA N/A GO:0009507 ... A6MW31 N/A
    893164 8xlp:b (2.57) BS05 CLA N/A GO:0009507 ... A6MW31 N/A
    893165 8xlp:b (2.57) BS06 CLA N/A GO:0009507 ... A6MW31 N/A
    893166 8xlp:b (2.57) BS07 CLA N/A GO:0009507 ... A6MW31 N/A
    893167 8xlp:b (2.57) BS08 CLA N/A GO:0009507 ... A6MW31 N/A
    893168 8xlp:b (2.57) BS09 CLA N/A GO:0009507 ... A6MW31 N/A
    893169 8xlp:b (2.57) BS10 CLA N/A GO:0009507 ... A6MW31 N/A
    893170 8xlp:b (2.57) BS11 CLA N/A GO:0009507 ... A6MW31 N/A
    893171 8xlp:b (2.57) BS12 CLA N/A GO:0009507 ... A6MW31 N/A
    893172 8xlp:b (2.57) BS13 CLA N/A GO:0009507 ... A6MW31 N/A
    893173 8xlp:b (2.57) BS14 CLA N/A GO:0009507 ... A6MW31 N/A
    893174 8xlp:b (2.57) BS15 CLA N/A GO:0009507 ... A6MW31 N/A
    893175 8xlp:b (2.57) BS16 CLA N/A GO:0009507 ... A6MW31 N/A
    893176 8xlp:b (2.57) BS17 WVN N/A GO:0009507 ... A6MW31 N/A
    893177 8xlp:b (2.57) BS18 WVN N/A GO:0009507 ... A6MW31 N/A
    893178 8xlp:b (2.57) BS19 WVN N/A GO:0009507 ... A6MW31 N/A
    893179 8xlp:c (2.57) BS01 CLA N/A N/A A6MVR2 N/A
    893180 8xlp:c (2.57) BS02 CLA N/A N/A A6MVR2 N/A
    893181 8xlp:c (2.57) BS03 CLA N/A N/A A6MVR2 N/A
    893182 8xlp:c (2.57) BS04 CLA N/A N/A A6MVR2 N/A
    893183 8xlp:c (2.57) BS05 CLA N/A N/A A6MVR2 N/A
    893184 8xlp:c (2.57) BS06 CLA N/A N/A A6MVR2 N/A
    893185 8xlp:c (2.57) BS07 CLA N/A N/A A6MVR2 N/A
    893186 8xlp:c (2.57) BS08 CLA N/A N/A A6MVR2 N/A
    893187 8xlp:c (2.57) BS09 CLA N/A N/A A6MVR2 N/A
    893188 8xlp:c (2.57) BS10 CLA N/A N/A A6MVR2 N/A
    893189 8xlp:c (2.57) BS11 CLA N/A N/A A6MVR2 N/A
    893190 8xlp:c (2.57) BS12 CLA N/A N/A A6MVR2 N/A
    893191 8xlp:c (2.57) BS13 CLA N/A N/A A6MVR2 N/A
    893192 8xlp:c (2.57) BS14 WVN N/A N/A A6MVR2 N/A
    893193 8xlp:c (2.57) BS15 WVN N/A N/A A6MVR2 N/A
    893194 8xlp:c (2.57) BS16 WVN N/A N/A A6MVR2 N/A
    893195 8xlp:d (2.57) BS01 FE2 N/A GO:0005506 ... A6MVR3 N/A
    893196 8xlp:d (2.57) BS02 CLA N/A GO:0005506 ... A6MVR3 N/A
    893197 8xlp:d (2.57) BS03 PHO N/A GO:0005506 ... A6MVR3 N/A
    893198 8xlp:d (2.57) BS04 BCT N/A GO:0005506 ... A6MVR3 N/A
    893199 8xlp:d (2.57) BS05 CLA N/A GO:0005506 ... A6MVR3 N/A
    893200 8xlp:d (2.57) BS06 CLA N/A GO:0005506 ... A6MVR3 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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