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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 817662 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    810401 8wey:2 (1.92) BS18 5X6 N/A GO:0009765 ... N/A 38442179
    810402 8wey:2 (1.92) BS19 5X6 N/A GO:0009765 ... N/A 38442179
    810403 8wey:3 (1.92) BS01 CLA N/A GO:0009765 ... N/A 38442179
    810404 8wey:3 (1.92) BS02 CLA N/A GO:0009765 ... N/A 38442179
    810405 8wey:3 (1.92) BS03 CLA N/A GO:0009765 ... N/A 38442179
    810406 8wey:3 (1.92) BS04 CLA N/A GO:0009765 ... N/A 38442179
    810407 8wey:3 (1.92) BS05 CLA N/A GO:0009765 ... N/A 38442179
    810408 8wey:3 (1.92) BS06 CLA N/A GO:0009765 ... N/A 38442179
    810409 8wey:3 (1.92) BS07 CLA N/A GO:0009765 ... N/A 38442179
    810410 8wey:3 (1.92) BS08 CLA N/A GO:0009765 ... N/A 38442179
    810411 8wey:3 (1.92) BS09 CLA N/A GO:0009765 ... N/A 38442179
    810412 8wey:3 (1.92) BS10 CLA N/A GO:0009765 ... N/A 38442179
    810413 8wey:3 (1.92) BS11 CLA N/A GO:0009765 ... N/A 38442179
    810414 8wey:3 (1.92) BS12 5X6 N/A GO:0009765 ... N/A 38442179
    810415 8wey:3 (1.92) BS13 5X6 N/A GO:0009765 ... N/A 38442179
    810416 8wey:3 (1.92) BS14 5X6 N/A GO:0009765 ... N/A 38442179
    810417 8wey:4 (1.92) BS01 CLA N/A GO:0009765 ... N/A 38442179
    810418 8wey:4 (1.92) BS02 CLA N/A GO:0009765 ... N/A 38442179
    810419 8wey:4 (1.92) BS03 CLA N/A GO:0009765 ... N/A 38442179
    810420 8wey:4 (1.92) BS04 CLA N/A GO:0009765 ... N/A 38442179
    810421 8wey:4 (1.92) BS05 CLA N/A GO:0009765 ... N/A 38442179
    810422 8wey:4 (1.92) BS06 CLA N/A GO:0009765 ... N/A 38442179
    810423 8wey:4 (1.92) BS07 CLA N/A GO:0009765 ... N/A 38442179
    810424 8wey:4 (1.92) BS08 5X6 N/A GO:0009765 ... N/A 38442179
    810425 8wey:4 (1.92) BS09 5X6 N/A GO:0009765 ... N/A 38442179
    810426 8wey:4 (1.92) BS10 5X6 N/A GO:0009765 ... N/A 38442179
    810427 8wey:5 (1.92) BS01 CLA N/A GO:0009765 ... N/A 38442179
    810428 8wey:5 (1.92) BS02 CLA N/A GO:0009765 ... N/A 38442179
    810429 8wey:5 (1.92) BS03 5X6 N/A GO:0009765 ... N/A 38442179
    810430 8wey:5 (1.92) BS04 CLA N/A GO:0009765 ... N/A 38442179
    810431 8wey:5 (1.92) BS05 CLA N/A GO:0009765 ... N/A 38442179
    810432 8wey:5 (1.92) BS06 CLA N/A GO:0009765 ... N/A 38442179
    810433 8wey:5 (1.92) BS07 CLA N/A GO:0009765 ... N/A 38442179
    810434 8wey:5 (1.92) BS08 CLA N/A GO:0009765 ... N/A 38442179
    810435 8wey:5 (1.92) BS09 CLA N/A GO:0009765 ... N/A 38442179
    810436 8wey:5 (1.92) BS10 CLA N/A GO:0009765 ... N/A 38442179
    810437 8wey:5 (1.92) BS11 CLA N/A GO:0009765 ... N/A 38442179
    810438 8wey:5 (1.92) BS12 CLA N/A GO:0009765 ... N/A 38442179
    810439 8wey:5 (1.92) BS13 CLA N/A GO:0009765 ... N/A 38442179
    810440 8wey:5 (1.92) BS14 CLA N/A GO:0009765 ... N/A 38442179
    810441 8wey:5 (1.92) BS15 CLA N/A GO:0009765 ... N/A 38442179
    810442 8wey:5 (1.92) BS16 5X6 N/A GO:0009765 ... N/A 38442179
    810443 8wey:5 (1.92) BS17 5X6 N/A GO:0009765 ... N/A 38442179
    810444 8wey:5 (1.92) BS18 5X6 N/A GO:0009765 ... N/A 38442179
    810445 8wey:5 (1.92) BS19 5X6 N/A GO:0009765 ... N/A 38442179
    810446 8wey:A (1.92) BS01 CL0 N/A GO:0009579 ... N/A 38442179
    810447 8wey:A (1.92) BS02 CLA N/A GO:0009579 ... N/A 38442179
    810448 8wey:A (1.92) BS03 CLA N/A GO:0009579 ... N/A 38442179
    810449 8wey:A (1.92) BS04 CLA N/A GO:0009579 ... N/A 38442179
    810450 8wey:A (1.92) BS05 CLA N/A GO:0009579 ... N/A 38442179
    810451 8wey:A (1.92) BS06 CLA N/A GO:0009579 ... N/A 38442179
    810452 8wey:A (1.92) BS07 CLA N/A GO:0009579 ... N/A 38442179
    810453 8wey:A (1.92) BS08 CLA N/A GO:0009579 ... N/A 38442179
    810454 8wey:A (1.92) BS09 CLA N/A GO:0009579 ... N/A 38442179
    810455 8wey:A (1.92) BS10 CLA N/A GO:0009579 ... N/A 38442179
    810456 8wey:A (1.92) BS11 CLA N/A GO:0009579 ... N/A 38442179
    810457 8wey:A (1.92) BS12 CLA N/A GO:0009579 ... N/A 38442179
    810458 8wey:A (1.92) BS13 CLA N/A GO:0009579 ... N/A 38442179
    810459 8wey:A (1.92) BS14 CLA N/A GO:0009579 ... N/A 38442179
    810460 8wey:A (1.92) BS15 CLA N/A GO:0009579 ... N/A 38442179
    810461 8wey:A (1.92) BS16 CLA N/A GO:0009579 ... N/A 38442179
    810462 8wey:A (1.92) BS17 CLA N/A GO:0009579 ... N/A 38442179
    810463 8wey:A (1.92) BS18 CLA N/A GO:0009579 ... N/A 38442179
    810464 8wey:A (1.92) BS19 CLA N/A GO:0009579 ... N/A 38442179
    810465 8wey:A (1.92) BS20 CLA N/A GO:0009579 ... N/A 38442179
    810466 8wey:A (1.92) BS21 CLA N/A GO:0009579 ... N/A 38442179
    810467 8wey:A (1.92) BS22 CLA N/A GO:0009579 ... N/A 38442179
    810468 8wey:A (1.92) BS23 CLA N/A GO:0009579 ... N/A 38442179
    810469 8wey:A (1.92) BS24 CLA N/A GO:0009579 ... N/A 38442179
    810470 8wey:A (1.92) BS25 CLA N/A GO:0009579 ... N/A 38442179
    810471 8wey:A (1.92) BS26 CLA N/A GO:0009579 ... N/A 38442179
    810472 8wey:A (1.92) BS27 CLA N/A GO:0009579 ... N/A 38442179
    810473 8wey:A (1.92) BS28 CLA N/A GO:0009579 ... N/A 38442179
    810474 8wey:A (1.92) BS29 CLA N/A GO:0009579 ... N/A 38442179
    810475 8wey:A (1.92) BS30 CLA N/A GO:0009579 ... N/A 38442179
    810476 8wey:A (1.92) BS31 CLA N/A GO:0009579 ... N/A 38442179
    810477 8wey:A (1.92) BS32 CLA N/A GO:0009579 ... N/A 38442179
    810478 8wey:A (1.92) BS33 CLA N/A GO:0009579 ... N/A 38442179
    810479 8wey:A (1.92) BS34 CLA N/A GO:0009579 ... N/A 38442179
    810480 8wey:A (1.92) BS35 CLA N/A GO:0009579 ... N/A 38442179
    810481 8wey:A (1.92) BS36 CLA N/A GO:0009579 ... N/A 38442179
    810482 8wey:A (1.92) BS37 CLA N/A GO:0009579 ... N/A 38442179
    810483 8wey:A (1.92) BS38 CLA N/A GO:0009579 ... N/A 38442179
    810484 8wey:A (1.92) BS39 CLA N/A GO:0009579 ... N/A 38442179
    810485 8wey:A (1.92) BS40 PQN N/A GO:0009579 ... N/A 38442179
    810486 8wey:A (1.92) BS41 SF4 N/A GO:0009579 ... N/A 38442179
    810487 8wey:A (1.92) BS42 CLA N/A GO:0009579 ... N/A 38442179
    810488 8wey:A (1.92) BS43 CLA N/A GO:0009579 ... N/A 38442179
    810489 8wey:A (1.92) BS44 CLA N/A GO:0009579 ... N/A 38442179
    810490 8wey:A (1.92) BS45 CLA N/A GO:0009579 ... N/A 38442179
    810491 8wey:A (1.92) BS46 CLA N/A GO:0009579 ... N/A 38442179
    810492 8wey:A (1.92) BS47 CLA N/A GO:0009579 ... N/A 38442179
    810493 8wey:A (1.92) BS48 CLA N/A GO:0009579 ... N/A 38442179
    810494 8wey:A (1.92) BS49 CLA N/A GO:0009579 ... N/A 38442179
    810495 8wey:A (1.92) BS50 CLA N/A GO:0009579 ... N/A 38442179
    810496 8wey:A (1.92) BS51 CLA N/A GO:0009579 ... N/A 38442179
    810497 8wey:A (1.92) BS52 CLA N/A GO:0009579 ... N/A 38442179
    810498 8wey:A (1.92) BS53 CLA N/A GO:0009579 ... N/A 38442179
    810499 8wey:B (1.92) BS01 peptide N/A GO:0009522 ... N/A 38442179
    810500 8wey:B (1.92) BS02 CL0 N/A GO:0009522 ... N/A 38442179
    810501 8wey:B (1.92) BS03 CLA N/A GO:0009522 ... N/A 38442179
    810502 8wey:B (1.92) BS04 CLA N/A GO:0009522 ... N/A 38442179
    810503 8wey:B (1.92) BS05 CLA N/A GO:0009522 ... N/A 38442179
    810504 8wey:B (1.92) BS06 SF4 N/A GO:0009522 ... N/A 38442179
    810505 8wey:B (1.92) BS07 CLA N/A GO:0009522 ... N/A 38442179
    810506 8wey:B (1.92) BS08 CLA N/A GO:0009522 ... N/A 38442179
    810507 8wey:B (1.92) BS09 CLA N/A GO:0009522 ... N/A 38442179
    810508 8wey:B (1.92) BS10 CLA N/A GO:0009522 ... N/A 38442179
    810509 8wey:B (1.92) BS11 CLA N/A GO:0009522 ... N/A 38442179
    810510 8wey:B (1.92) BS12 CLA N/A GO:0009522 ... N/A 38442179
    810511 8wey:B (1.92) BS13 CLA N/A GO:0009522 ... N/A 38442179
    810512 8wey:B (1.92) BS14 CLA N/A GO:0009522 ... N/A 38442179
    810513 8wey:B (1.92) BS15 CLA N/A GO:0009522 ... N/A 38442179
    810514 8wey:B (1.92) BS16 CLA N/A GO:0009522 ... N/A 38442179
    810515 8wey:B (1.92) BS17 CLA N/A GO:0009522 ... N/A 38442179
    810516 8wey:B (1.92) BS18 CLA N/A GO:0009522 ... N/A 38442179
    810517 8wey:B (1.92) BS19 CLA N/A GO:0009522 ... N/A 38442179
    810518 8wey:B (1.92) BS20 CLA N/A GO:0009522 ... N/A 38442179
    810519 8wey:B (1.92) BS21 CLA N/A GO:0009522 ... N/A 38442179
    810520 8wey:B (1.92) BS22 CLA N/A GO:0009522 ... N/A 38442179
    810521 8wey:B (1.92) BS23 CLA N/A GO:0009522 ... N/A 38442179
    810522 8wey:B (1.92) BS24 CLA N/A GO:0009522 ... N/A 38442179
    810523 8wey:B (1.92) BS25 CLA N/A GO:0009522 ... N/A 38442179
    810524 8wey:B (1.92) BS26 CLA N/A GO:0009522 ... N/A 38442179
    810525 8wey:B (1.92) BS27 CLA N/A GO:0009522 ... N/A 38442179
    810526 8wey:B (1.92) BS28 CLA N/A GO:0009522 ... N/A 38442179
    810527 8wey:B (1.92) BS29 CLA N/A GO:0009522 ... N/A 38442179
    810528 8wey:B (1.92) BS30 CLA N/A GO:0009522 ... N/A 38442179
    810529 8wey:B (1.92) BS31 CLA N/A GO:0009522 ... N/A 38442179
    810530 8wey:B (1.92) BS32 CLA N/A GO:0009522 ... N/A 38442179
    810531 8wey:B (1.92) BS33 CLA N/A GO:0009522 ... N/A 38442179
    810532 8wey:B (1.92) BS34 CLA N/A GO:0009522 ... N/A 38442179
    810533 8wey:B (1.92) BS35 CLA N/A GO:0009522 ... N/A 38442179
    810534 8wey:B (1.92) BS36 CLA N/A GO:0009522 ... N/A 38442179
    810535 8wey:B (1.92) BS37 CLA N/A GO:0009522 ... N/A 38442179
    810536 8wey:B (1.92) BS38 CLA N/A GO:0009522 ... N/A 38442179
    810537 8wey:B (1.92) BS39 CLA N/A GO:0009522 ... N/A 38442179
    810538 8wey:B (1.92) BS40 CLA N/A GO:0009522 ... N/A 38442179
    810539 8wey:B (1.92) BS41 CLA N/A GO:0009522 ... N/A 38442179
    810540 8wey:B (1.92) BS42 CLA N/A GO:0009522 ... N/A 38442179
    810541 8wey:B (1.92) BS43 CLA N/A GO:0009522 ... N/A 38442179
    810542 8wey:B (1.92) BS44 CLA N/A GO:0009522 ... N/A 38442179
    810543 8wey:B (1.92) BS45 CLA N/A GO:0009522 ... N/A 38442179
    810544 8wey:B (1.92) BS46 CLA N/A GO:0009522 ... N/A 38442179
    810545 8wey:B (1.92) BS47 CLA N/A GO:0009522 ... N/A 38442179
    810546 8wey:B (1.92) BS48 PQN N/A GO:0009522 ... N/A 38442179
    810547 8wey:B (1.92) BS49 CLA N/A GO:0009522 ... N/A 38442179
    810548 8wey:B (1.92) BS50 CLA N/A GO:0009522 ... N/A 38442179
    810549 8wey:B (1.92) BS51 CLA N/A GO:0009522 ... N/A 38442179
    810550 8wey:C (1.92) BS01 SF4 N/A GO:0009055 ... N/A 38442179
    810551 8wey:C (1.92) BS02 SF4 N/A GO:0009055 ... N/A 38442179
    810552 8wey:F (1.92) BS01 CLA N/A GO:0009522 ... N/A 38442179
    810553 8wey:F (1.92) BS02 CLA N/A GO:0009522 ... N/A 38442179
    810554 8wey:F (1.92) BS03 CLA N/A GO:0009522 ... N/A 38442179
    810555 8wey:F (1.92) BS04 CLA N/A GO:0009522 ... N/A 38442179
    810556 8wey:F (1.92) BS05 CLA N/A GO:0009522 ... N/A 38442179
    810557 8wey:F (1.92) BS06 CLA N/A GO:0009522 ... N/A 38442179
    810558 8wey:F (1.92) BS07 CLA N/A GO:0009522 ... N/A 38442179
    810559 8wey:F (1.92) BS08 5X6 N/A GO:0009522 ... N/A 38442179
    810560 8wey:F (1.92) BS09 CLA N/A GO:0009522 ... N/A 38442179
    810561 8wey:I (1.92) BS01 peptide N/A GO:0009522 ... N/A 38442179
    810562 8wey:I (1.92) BS02 CLA N/A GO:0009522 ... N/A 38442179
    810563 8wey:I (1.92) BS03 CLA N/A GO:0009522 ... N/A 38442179
    810564 8wey:I (1.92) BS04 CLA N/A GO:0009522 ... N/A 38442179
    810565 8wey:J (1.92) BS01 CLA N/A GO:0009522 ... N/A 38442179
    810566 8wey:J (1.92) BS02 CLA N/A GO:0009522 ... N/A 38442179
    810567 8wey:J (1.92) BS03 CLA N/A GO:0009522 ... N/A 38442179
    810568 8wey:J (1.92) BS04 CLA N/A GO:0009522 ... N/A 38442179
    810569 8wey:J (1.92) BS05 5X6 N/A GO:0009522 ... N/A 38442179
    810570 8wey:K (1.92) BS01 CLA N/A GO:0009522 ... N/A 38442179
    810571 8wey:K (1.92) BS02 CLA N/A GO:0009522 ... N/A 38442179
    810572 8wey:K (1.92) BS03 CLA N/A GO:0009522 ... N/A 38442179
    810573 8wey:K (1.92) BS04 CLA N/A GO:0009522 ... N/A 38442179
    810574 8wey:K (1.92) BS05 CLA N/A GO:0009522 ... N/A 38442179
    810575 8wey:L (1.92) BS01 CLA N/A GO:0009522 ... N/A 38442179
    810576 8wey:L (1.92) BS02 CLA N/A GO:0009522 ... N/A 38442179
    810577 8wey:L (1.92) BS03 CLA N/A GO:0009522 ... N/A 38442179
    810578 8wey:L (1.92) BS04 CLA N/A GO:0009522 ... N/A 38442179
    810579 8wey:L (1.92) BS05 CLA N/A GO:0009522 ... N/A 38442179
    810580 8wey:L (1.92) BS06 CLA N/A GO:0009522 ... N/A 38442179
    810581 8wf5:A (1.72) BS01 WC5 1.11.1.-
    1.7.-.-    		 GO:0004601 ... P68082 38780472
    810582 8wfi:A (2.58) BS01 GLY ? GO:0005283 ... P48067 38513663
    810583 8wfj:A (3.35) BS01 W5F ? GO:0005283 ... P48067 38513663
    810584 8wfk:A (3.22) BS01 W5O ? GO:0005283 ... P48067 38513663
    810585 8wfl:A (3.03) BS01 W5X ? GO:0005283 ... P48067 38513663
    810586 8wfq:A (3.5) BS01 NAI 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36    		 GO:0000166 ... P00352 N/A
    810587 8wfq:B (3.5) BS01 NAI 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36    		 GO:0000166 ... P00352 N/A
    810588 8wfq:C (3.5) BS01 NAI 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36    		 GO:0000166 ... P00352 N/A
    810589 8wfq:D (3.5) BS01 NAI 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36    		 GO:0000166 ... P00352 N/A
    810590 8wfq:E (3.5) BS01 NAI 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36    		 GO:0000166 ... P00352 N/A
    810591 8wfq:F (3.5) BS01 NAI 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36    		 GO:0000166 ... P00352 N/A
    810592 8wfq:G (3.5) BS01 NAI 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36    		 GO:0000166 ... P00352 N/A
    810593 8wfq:H (3.5) BS01 NAI 1.2.1.19
    1.2.1.28
    1.2.1.3
    1.2.1.36    		 GO:0000166 ... P00352 N/A
    810594 8wfy:A (2.6) BS01 5OD 3.1.3.48 GO:0004725 ... Q06124 N/A
    810595 8wfy:B (2.6) BS01 5OD 3.1.3.48 GO:0004725 ... Q06124 N/A
    810596 8wg0:A (1.95) BS01 CA 3.2.1.70 GO:0016787 ... A5FBI0 38661728
    810597 8wg0:A (1.95) BS02 GLC 3.2.1.70 GO:0016787 ... A5FBI0 38661728
    810598 8wg0:B (1.95) BS01 CA 3.2.1.70 GO:0016787 ... A5FBI0 38661728
    810599 8wg0:B (1.95) BS02 GLC 3.2.1.70 GO:0016787 ... A5FBI0 38661728
    810600 8wg0:C (1.95) BS01 CA 3.2.1.70 GO:0016787 ... A5FBI0 38661728
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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