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BioLiP
Download all results in tab-seperated text for 817662 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    797001 8src:C (2.92) BS06 CA ? GO:0005216 ... F2UB89 38773335
    797002 8src:C (2.92) BS07 CLR ? GO:0005216 ... F2UB89 38773335
    797003 8src:C (2.92) BS08 APR ? GO:0005216 ... F2UB89 38773335
    797004 8src:C (2.92) BS09 CLR ? GO:0005216 ... F2UB89 38773335
    797005 8src:C (2.92) BS10 CLR ? GO:0005216 ... F2UB89 38773335
    797006 8src:D (2.92) BS01 CLR ? GO:0005216 ... F2UB89 38773335
    797007 8src:D (2.92) BS02 CLR ? GO:0005216 ... F2UB89 38773335
    797008 8src:D (2.92) BS03 CLR ? GO:0005216 ... F2UB89 38773335
    797009 8src:D (2.92) BS04 APR ? GO:0005216 ... F2UB89 38773335
    797010 8src:D (2.92) BS05 CA ? GO:0005216 ... F2UB89 38773335
    797011 8src:D (2.92) BS06 CA ? GO:0005216 ... F2UB89 38773335
    797012 8src:D (2.92) BS07 CA ? GO:0005216 ... F2UB89 38773335
    797013 8src:D (2.92) BS08 CA ? GO:0005216 ... F2UB89 38773335
    797014 8src:D (2.92) BS09 CLR ? GO:0005216 ... F2UB89 38773335
    797015 8src:D (2.92) BS10 APR ? GO:0005216 ... F2UB89 38773335
    797016 8srd:A (2.91) BS01 APR ? GO:0005216 ... F2UB89 N/A
    797017 8srd:A (2.91) BS02 MG ? GO:0005216 ... F2UB89 N/A
    797018 8srd:A (2.91) BS03 CLR ? GO:0005216 ... F2UB89 N/A
    797019 8srd:A (2.91) BS04 APR ? GO:0005216 ... F2UB89 N/A
    797020 8srd:A (2.91) BS05 CLR ? GO:0005216 ... F2UB89 N/A
    797021 8srd:A (2.91) BS06 CLR ? GO:0005216 ... F2UB89 N/A
    797022 8srd:B (2.91) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    797023 8srd:B (2.91) BS02 APR ? GO:0005216 ... F2UB89 N/A
    797024 8srd:B (2.91) BS03 MG ? GO:0005216 ... F2UB89 N/A
    797025 8srd:B (2.91) BS04 CLR ? GO:0005216 ... F2UB89 N/A
    797026 8srd:B (2.91) BS05 APR ? GO:0005216 ... F2UB89 N/A
    797027 8srd:B (2.91) BS06 CLR ? GO:0005216 ... F2UB89 N/A
    797028 8srd:C (2.91) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    797029 8srd:C (2.91) BS02 APR ? GO:0005216 ... F2UB89 N/A
    797030 8srd:C (2.91) BS03 MG ? GO:0005216 ... F2UB89 N/A
    797031 8srd:C (2.91) BS04 CLR ? GO:0005216 ... F2UB89 N/A
    797032 8srd:C (2.91) BS05 APR ? GO:0005216 ... F2UB89 N/A
    797033 8srd:C (2.91) BS06 CLR ? GO:0005216 ... F2UB89 N/A
    797034 8srd:D (2.91) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    797035 8srd:D (2.91) BS02 CLR ? GO:0005216 ... F2UB89 N/A
    797036 8srd:D (2.91) BS03 APR ? GO:0005216 ... F2UB89 N/A
    797037 8srd:D (2.91) BS04 MG ? GO:0005216 ... F2UB89 N/A
    797038 8srd:D (2.91) BS05 CLR ? GO:0005216 ... F2UB89 N/A
    797039 8srd:D (2.91) BS06 APR ? GO:0005216 ... F2UB89 N/A
    797040 8sre:A (2.52) BS01 APR ? GO:0005216 ... F2UB89 N/A
    797041 8sre:A (2.52) BS02 MG ? GO:0005216 ... F2UB89 N/A
    797042 8sre:A (2.52) BS03 MG ? GO:0005216 ... F2UB89 N/A
    797043 8sre:A (2.52) BS04 MG ? GO:0005216 ... F2UB89 N/A
    797044 8sre:A (2.52) BS05 MG ? GO:0005216 ... F2UB89 N/A
    797045 8sre:A (2.52) BS06 CLR ? GO:0005216 ... F2UB89 N/A
    797046 8sre:A (2.52) BS07 APR ? GO:0005216 ... F2UB89 N/A
    797047 8sre:A (2.52) BS08 CLR ? GO:0005216 ... F2UB89 N/A
    797048 8sre:A (2.52) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    797049 8sre:A (2.52) BS10 CLR ? GO:0005216 ... F2UB89 N/A
    797050 8sre:B (2.52) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    797051 8sre:B (2.52) BS02 APR ? GO:0005216 ... F2UB89 N/A
    797052 8sre:B (2.52) BS03 MG ? GO:0005216 ... F2UB89 N/A
    797053 8sre:B (2.52) BS04 MG ? GO:0005216 ... F2UB89 N/A
    797054 8sre:B (2.52) BS05 MG ? GO:0005216 ... F2UB89 N/A
    797055 8sre:B (2.52) BS06 MG ? GO:0005216 ... F2UB89 N/A
    797056 8sre:B (2.52) BS07 CLR ? GO:0005216 ... F2UB89 N/A
    797057 8sre:B (2.52) BS08 APR ? GO:0005216 ... F2UB89 N/A
    797058 8sre:B (2.52) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    797059 8sre:B (2.52) BS10 CLR ? GO:0005216 ... F2UB89 N/A
    797060 8sre:C (2.52) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    797061 8sre:C (2.52) BS02 CLR ? GO:0005216 ... F2UB89 N/A
    797062 8sre:C (2.52) BS03 CLR ? GO:0005216 ... F2UB89 N/A
    797063 8sre:C (2.52) BS04 APR ? GO:0005216 ... F2UB89 N/A
    797064 8sre:C (2.52) BS05 MG ? GO:0005216 ... F2UB89 N/A
    797065 8sre:C (2.52) BS06 MG ? GO:0005216 ... F2UB89 N/A
    797066 8sre:C (2.52) BS07 MG ? GO:0005216 ... F2UB89 N/A
    797067 8sre:C (2.52) BS08 MG ? GO:0005216 ... F2UB89 N/A
    797068 8sre:C (2.52) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    797069 8sre:C (2.52) BS10 APR ? GO:0005216 ... F2UB89 N/A
    797070 8sre:D (2.52) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    797071 8sre:D (2.52) BS02 CLR ? GO:0005216 ... F2UB89 N/A
    797072 8sre:D (2.52) BS03 APR ? GO:0005216 ... F2UB89 N/A
    797073 8sre:D (2.52) BS04 MG ? GO:0005216 ... F2UB89 N/A
    797074 8sre:D (2.52) BS05 MG ? GO:0005216 ... F2UB89 N/A
    797075 8sre:D (2.52) BS06 MG ? GO:0005216 ... F2UB89 N/A
    797076 8sre:D (2.52) BS07 MG ? GO:0005216 ... F2UB89 N/A
    797077 8sre:D (2.52) BS08 CLR ? GO:0005216 ... F2UB89 N/A
    797078 8sre:D (2.52) BS09 APR ? GO:0005216 ... F2UB89 N/A
    797079 8sre:D (2.52) BS10 CLR ? GO:0005216 ... F2UB89 N/A
    797080 8srf:A (2.52) BS01 RP5 ? GO:0005216 ... F2UB89 N/A
    797081 8srf:A (2.52) BS02 AMP ? GO:0005216 ... F2UB89 N/A
    797082 8srf:A (2.52) BS03 APR ? GO:0005216 ... F2UB89 N/A
    797083 8srf:A (2.52) BS04 MG ? GO:0005216 ... F2UB89 N/A
    797084 8srf:A (2.52) BS05 MG ? GO:0005216 ... F2UB89 N/A
    797085 8srf:A (2.52) BS06 MG ? GO:0005216 ... F2UB89 N/A
    797086 8srf:A (2.52) BS07 MG ? GO:0005216 ... F2UB89 N/A
    797087 8srf:A (2.52) BS08 CLR ? GO:0005216 ... F2UB89 N/A
    797088 8srf:A (2.52) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    797089 8srf:A (2.52) BS10 CLR ? GO:0005216 ... F2UB89 N/A
    797090 8srf:A (2.52) BS11 CLR ? GO:0005216 ... F2UB89 N/A
    797091 8srf:B (2.52) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    797092 8srf:B (2.52) BS02 RP5 ? GO:0005216 ... F2UB89 N/A
    797093 8srf:B (2.52) BS03 AMP ? GO:0005216 ... F2UB89 N/A
    797094 8srf:B (2.52) BS04 APR ? GO:0005216 ... F2UB89 N/A
    797095 8srf:B (2.52) BS05 MG ? GO:0005216 ... F2UB89 N/A
    797096 8srf:B (2.52) BS06 MG ? GO:0005216 ... F2UB89 N/A
    797097 8srf:B (2.52) BS07 MG ? GO:0005216 ... F2UB89 N/A
    797098 8srf:B (2.52) BS08 MG ? GO:0005216 ... F2UB89 N/A
    797099 8srf:B (2.52) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    797100 8srf:B (2.52) BS10 CLR ? GO:0005216 ... F2UB89 N/A
    797101 8srf:B (2.52) BS11 CLR ? GO:0005216 ... F2UB89 N/A
    797102 8srf:C (2.52) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    797103 8srf:C (2.52) BS02 RP5 ? GO:0005216 ... F2UB89 N/A
    797104 8srf:C (2.52) BS03 AMP ? GO:0005216 ... F2UB89 N/A
    797105 8srf:C (2.52) BS04 APR ? GO:0005216 ... F2UB89 N/A
    797106 8srf:C (2.52) BS05 MG ? GO:0005216 ... F2UB89 N/A
    797107 8srf:C (2.52) BS06 MG ? GO:0005216 ... F2UB89 N/A
    797108 8srf:C (2.52) BS07 MG ? GO:0005216 ... F2UB89 N/A
    797109 8srf:C (2.52) BS08 MG ? GO:0005216 ... F2UB89 N/A
    797110 8srf:C (2.52) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    797111 8srf:C (2.52) BS10 CLR ? GO:0005216 ... F2UB89 N/A
    797112 8srf:C (2.52) BS11 CLR ? GO:0005216 ... F2UB89 N/A
    797113 8srf:D (2.52) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    797114 8srf:D (2.52) BS02 CLR ? GO:0005216 ... F2UB89 N/A
    797115 8srf:D (2.52) BS03 CLR ? GO:0005216 ... F2UB89 N/A
    797116 8srf:D (2.52) BS04 RP5 ? GO:0005216 ... F2UB89 N/A
    797117 8srf:D (2.52) BS05 AMP ? GO:0005216 ... F2UB89 N/A
    797118 8srf:D (2.52) BS06 APR ? GO:0005216 ... F2UB89 N/A
    797119 8srf:D (2.52) BS07 MG ? GO:0005216 ... F2UB89 N/A
    797120 8srf:D (2.52) BS08 MG ? GO:0005216 ... F2UB89 N/A
    797121 8srf:D (2.52) BS09 MG ? GO:0005216 ... F2UB89 N/A
    797122 8srf:D (2.52) BS10 MG ? GO:0005216 ... F2UB89 N/A
    797123 8srf:D (2.52) BS11 CLR ? GO:0005216 ... F2UB89 N/A
    797124 8srg:A (3.03) BS01 RP5 ? GO:0005216 ... F2UB89 N/A
    797125 8srg:A (3.03) BS02 AMP ? GO:0005216 ... F2UB89 N/A
    797126 8srg:A (3.03) BS03 MG ? GO:0005216 ... F2UB89 N/A
    797127 8srg:A (3.03) BS04 MG ? GO:0005216 ... F2UB89 N/A
    797128 8srg:A (3.03) BS05 MG ? GO:0005216 ... F2UB89 N/A
    797129 8srg:A (3.03) BS06 CLR ? GO:0005216 ... F2UB89 N/A
    797130 8srg:A (3.03) BS07 CLR ? GO:0005216 ... F2UB89 N/A
    797131 8srg:A (3.03) BS08 CLR ? GO:0005216 ... F2UB89 N/A
    797132 8srg:A (3.03) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    797133 8srg:B (3.03) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    797134 8srg:B (3.03) BS02 RP5 ? GO:0005216 ... F2UB89 N/A
    797135 8srg:B (3.03) BS03 AMP ? GO:0005216 ... F2UB89 N/A
    797136 8srg:B (3.03) BS04 MG ? GO:0005216 ... F2UB89 N/A
    797137 8srg:B (3.03) BS05 MG ? GO:0005216 ... F2UB89 N/A
    797138 8srg:B (3.03) BS06 MG ? GO:0005216 ... F2UB89 N/A
    797139 8srg:B (3.03) BS07 CLR ? GO:0005216 ... F2UB89 N/A
    797140 8srg:B (3.03) BS08 CLR ? GO:0005216 ... F2UB89 N/A
    797141 8srg:B (3.03) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    797142 8srg:C (3.03) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    797143 8srg:C (3.03) BS02 RP5 ? GO:0005216 ... F2UB89 N/A
    797144 8srg:C (3.03) BS03 AMP ? GO:0005216 ... F2UB89 N/A
    797145 8srg:C (3.03) BS04 MG ? GO:0005216 ... F2UB89 N/A
    797146 8srg:C (3.03) BS05 MG ? GO:0005216 ... F2UB89 N/A
    797147 8srg:C (3.03) BS06 MG ? GO:0005216 ... F2UB89 N/A
    797148 8srg:C (3.03) BS07 CLR ? GO:0005216 ... F2UB89 N/A
    797149 8srg:C (3.03) BS08 CLR ? GO:0005216 ... F2UB89 N/A
    797150 8srg:C (3.03) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    797151 8srg:D (3.03) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    797152 8srg:D (3.03) BS02 CLR ? GO:0005216 ... F2UB89 N/A
    797153 8srg:D (3.03) BS03 CLR ? GO:0005216 ... F2UB89 N/A
    797154 8srg:D (3.03) BS04 RP5 ? GO:0005216 ... F2UB89 N/A
    797155 8srg:D (3.03) BS05 AMP ? GO:0005216 ... F2UB89 N/A
    797156 8srg:D (3.03) BS06 MG ? GO:0005216 ... F2UB89 N/A
    797157 8srg:D (3.03) BS07 MG ? GO:0005216 ... F2UB89 N/A
    797158 8srg:D (3.03) BS08 MG ? GO:0005216 ... F2UB89 N/A
    797159 8srg:D (3.03) BS09 CLR ? GO:0005216 ... F2UB89 N/A
    797160 8srh:A (3.79) BS01 APR ? GO:0005216 ... F2UB89 N/A
    797161 8srh:A (3.79) BS02 MG ? GO:0005216 ... F2UB89 N/A
    797162 8srh:A (3.79) BS03 APR ? GO:0005216 ... F2UB89 N/A
    797163 8srh:A (3.79) BS04 CLR ? GO:0005216 ... F2UB89 N/A
    797164 8srh:A (3.79) BS05 CLR ? GO:0005216 ... F2UB89 N/A
    797165 8srh:A (3.79) BS06 CLR ? GO:0005216 ... F2UB89 N/A
    797166 8srh:B (3.79) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    797167 8srh:B (3.79) BS02 APR ? GO:0005216 ... F2UB89 N/A
    797168 8srh:B (3.79) BS03 MG ? GO:0005216 ... F2UB89 N/A
    797169 8srh:B (3.79) BS04 APR ? GO:0005216 ... F2UB89 N/A
    797170 8srh:B (3.79) BS05 CLR ? GO:0005216 ... F2UB89 N/A
    797171 8srh:B (3.79) BS06 CLR ? GO:0005216 ... F2UB89 N/A
    797172 8srh:C (3.79) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    797173 8srh:C (3.79) BS02 APR ? GO:0005216 ... F2UB89 N/A
    797174 8srh:C (3.79) BS03 MG ? GO:0005216 ... F2UB89 N/A
    797175 8srh:C (3.79) BS04 APR ? GO:0005216 ... F2UB89 N/A
    797176 8srh:C (3.79) BS05 CLR ? GO:0005216 ... F2UB89 N/A
    797177 8srh:C (3.79) BS06 CLR ? GO:0005216 ... F2UB89 N/A
    797178 8srh:D (3.79) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    797179 8srh:D (3.79) BS02 CLR ? GO:0005216 ... F2UB89 N/A
    797180 8srh:D (3.79) BS03 CLR ? GO:0005216 ... F2UB89 N/A
    797181 8srh:D (3.79) BS04 APR ? GO:0005216 ... F2UB89 N/A
    797182 8srh:D (3.79) BS05 MG ? GO:0005216 ... F2UB89 N/A
    797183 8srh:D (3.79) BS06 APR ? GO:0005216 ... F2UB89 N/A
    797184 8sri:A (2.73) BS01 APR ? GO:0005216 ... F2UB89 N/A
    797185 8sri:A (2.73) BS02 MG ? GO:0005216 ... F2UB89 N/A
    797186 8sri:A (2.73) BS03 MG ? GO:0005216 ... F2UB89 N/A
    797187 8sri:A (2.73) BS04 MG ? GO:0005216 ... F2UB89 N/A
    797188 8sri:A (2.73) BS05 APR ? GO:0005216 ... F2UB89 N/A
    797189 8sri:A (2.73) BS06 CLR ? GO:0005216 ... F2UB89 N/A
    797190 8sri:A (2.73) BS07 CLR ? GO:0005216 ... F2UB89 N/A
    797191 8sri:A (2.73) BS08 CLR ? GO:0005216 ... F2UB89 N/A
    797192 8sri:B (2.73) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    797193 8sri:B (2.73) BS02 APR ? GO:0005216 ... F2UB89 N/A
    797194 8sri:B (2.73) BS03 MG ? GO:0005216 ... F2UB89 N/A
    797195 8sri:B (2.73) BS04 MG ? GO:0005216 ... F2UB89 N/A
    797196 8sri:B (2.73) BS05 MG ? GO:0005216 ... F2UB89 N/A
    797197 8sri:B (2.73) BS06 APR ? GO:0005216 ... F2UB89 N/A
    797198 8sri:B (2.73) BS07 CLR ? GO:0005216 ... F2UB89 N/A
    797199 8sri:B (2.73) BS08 CLR ? GO:0005216 ... F2UB89 N/A
    797200 8sri:C (2.73) BS01 CLR ? GO:0005216 ... F2UB89 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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