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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    10001 2vjc:A (2.3) BS02 CHH 3.1.1.7 GO:0001507 ... P04058 18701720 BindingDB: IC50=8.5nM
    10002 2vjc:B (2.3) BS01 CHH 3.1.1.7 GO:0001507 ... P04058 18701720 BindingDB: IC50=8.5nM
    10003 2vjx:A (1.85) BS01 IFL 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=11uM
    PDBbind: -logKd/Ki=4.96, Ki=11uM
    BindingDB: Ki=1.1e+4nM
    10004 2vjx:B (1.85) BS01 IFL 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=11uM
    BindingDB: Ki=1.1e+4nM
    10005 2vk2:A (1.2) BS01 GZL ? GO:0005534 ... P39325 19744923 MOAD: Kd=0.13uM
    PDBbind: -logKd/Ki=6.89, Kd=0.13uM
    10006 2vk6:A (1.5) BS02 DAN 3.2.1.18 GO:0004308 ... Q59310 18218621 PDBbind: -logKd/Ki=5.30, Ki=5uM
    10007 2vkm:A (2.05) BS01 BSD 3.4.23.46 GO:0004190 ... P56817 18180160 MOAD: Ki=1.8nM
    PDBbind: -logKd/Ki=8.74, Ki=1.8nM
    BindingDB: IC50=1nM, Ki=1.8nM
    10008 2vkm:B (2.05) BS01 BSD 3.4.23.46 GO:0004190 ... P56817 18180160 MOAD: Ki=1.8nM
    BindingDB: IC50=1nM, Ki=1.8nM
    10009 2vkm:C (2.05) BS01 BSD 3.4.23.46 GO:0004190 ... P56817 18180160 MOAD: Ki=1.8nM
    BindingDB: IC50=1nM, Ki=1.8nM
    10010 2vkm:D (2.05) BS01 BSD 3.4.23.46 GO:0004190 ... P56817 18180160 MOAD: Ki=1.8nM
    BindingDB: IC50=1nM, Ki=1.8nM
    10011 2vku:A (1.95) BS01 DBE 1.14.15.36 GO:0004497 ... P9WPP9 18367444 MOAD: Kd=29.5uM
    10012 2vku:A (1.95) BS02 DBE 1.14.15.36 GO:0004497 ... P9WPP9 18367444 MOAD: Kd=29.5uM
    10013 2vku:A (1.95) BS03 DBE 1.14.15.36 GO:0004497 ... P9WPP9 18367444 MOAD: Kd=29.5uM
    10014 2vku:A (1.95) BS04 DBE 1.14.15.36 GO:0004497 ... P9WPP9 18367444 MOAD: Kd=29.5uM
    10015 2vkv:A (1.74) BS01 TDC ? GO:0000976 ... P0ACT4 18587152 MOAD: Ka=45000000M^-1
    10016 2vl4:A (1.9) BS01 MNM 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=975nM
    PDBbind: -logKd/Ki=6.01, Ki=975nM
    10017 2vl4:B (1.9) BS01 MNM 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=975nM
    10018 2vl8:A (2.31) BS01 UDP 2.4.1.-
    3.4.22.-    		 GO:0016757 ... Q46342 18505687 PDBbind: -logKd/Ki=4.52, IC50=30uM
    10019 2vl8:A (2.31) BS02 CTS 2.4.1.-
    3.4.22.-    		 GO:0016757 ... Q46342 18505687 MOAD: ic50~30uM
    10020 2vl8:B (2.31) BS02 CTS 2.4.1.-
    3.4.22.-    		 GO:0016757 ... Q46342 18505687 MOAD: ic50~30uM
    10021 2vl8:C (2.31) BS02 CTS 2.4.1.-
    3.4.22.-    		 GO:0016757 ... Q46342 18505687 MOAD: ic50~30uM
    10022 2vla:A (1.3) BS01 dna 3.1.21.4 N/A A3FMN7 18433771 PDBbind: Kd=7.3nM
    10023 2vla:A (1.3) BS02 dna 3.1.21.4 N/A A3FMN7 18433771 PDBbind: Kd=7.3nM
    10024 2vle:A (2.4) BS01 DZN 1.2.1.3 GO:0004029 ... P05091 18613661 PDBbind: -logKd/Ki=7.10, IC50=80nM
    BindingDB: IC50=80nM
    10025 2vle:B (2.4) BS01 DZN 1.2.1.3 GO:0004029 ... P05091 18613661 PDBbind: -logKd/Ki=7.10, IC50=80nM
    BindingDB: IC50=80nM
    10026 2vle:C (2.4) BS01 DZN 1.2.1.3 GO:0004029 ... P05091 18613661 BindingDB: IC50=80nM
    10027 2vle:D (2.4) BS01 DZN 1.2.1.3 GO:0004029 ... P05091 18613661 BindingDB: IC50=80nM
    10028 2vle:E (2.4) BS01 DZN 1.2.1.3 GO:0004029 ... P05091 18613661 BindingDB: IC50=80nM
    10029 2vle:F (2.4) BS01 DZN 1.2.1.3 GO:0004029 ... P05091 18613661 BindingDB: IC50=80nM
    10030 2vle:G (2.4) BS01 DZN 1.2.1.3 GO:0004029 ... P05091 18613661 BindingDB: IC50=80nM
    10031 2vle:H (2.4) BS01 DZN 1.2.1.3 GO:0004029 ... P05091 18613661 BindingDB: IC50=80nM
    10032 2vmc:A (1.9) BS02 NGA ? GO:0005737 ... P42530 18384150 PDBbind: -logKd/Ki=2.94, Kd=1.15mM
    10033 2vmd:A (1.9) BS02 MBG ? GO:0005737 ... P42530 18384150 MOAD: Kd=0.95mM
    PDBbind: -logKd/Ki=3.02, Kd=0.95mM
    10034 2vmf:A (2.1) BS01 MVL 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=1400nM
    PDBbind: -logKd/Ki=5.85, Kd=1400nM
    BindingDB: Ki=1400nM
    10035 2vmf:B (2.1) BS01 MVL 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=1400nM
    BindingDB: Ki=1400nM
    10036 2vmg:A (1.9) BS02 MBG ? N/A A0A0H2YQB3 18292090 MOAD: Ka=480M^-1
    10037 2vnh:A (2.27) BS02 NAP 1.18.1.2
    1.19.1.1    		 GO:0000166 ... Q9L6V3 18973834 MOAD: Kd=222uM
    10038 2vni:A (2.24) BS02 A2P 1.18.1.2
    1.19.1.1    		 GO:0000166 ... Q9L6V3 18973834 MOAD: Kd=204uM
    10039 2vnj:A (2.13) BS02 NAP 1.18.1.2
    1.19.1.1    		 GO:0000166 ... Q9L6V3 18973834 MOAD: Kd=222uM
    10040 2vnk:A (1.93) BS02 NAP 1.18.1.2
    1.19.1.1    		 GO:0000166 ... Q9L6V3 18973834 MOAD: Kd=222uM
    10041 2vnk:B (1.93) BS02 NAP 1.18.1.2
    1.19.1.1    		 GO:0000166 ... Q9L6V3 18973834 MOAD: Kd=222uM
    10042 2vnk:C (1.93) BS02 NAP 1.18.1.2
    1.19.1.1    		 GO:0000166 ... Q9L6V3 18973834 MOAD: Kd=222uM
    10043 2vnk:D (1.93) BS02 NAP 1.18.1.2
    1.19.1.1    		 GO:0000166 ... Q9L6V3 18973834 MOAD: Kd=222uM
    10044 2vnm:A (1.79) BS01 CM8 3.4.23.46 GO:0004190 ... P56817 18457381 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    10045 2vnm:A (1.79) BS02 CM8 3.4.23.46 GO:0004190 ... P56817 18457381 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    10046 2vnn:A (1.87) BS01 CM7 3.4.23.46 GO:0004190 ... P56817 18457381 MOAD: ic50=2nM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    BindingDB: IC50=2nM
    10047 2vnp:A (2.19) BS03 DED 5.3.3.2 GO:0000287 ... Q46822 18391416 MOAD: Ki=0.12nM
    PDBbind: -logKd/Ki=9.92, Ki=0.12nM
    10048 2vnp:B (2.19) BS03 DED 5.3.3.2 GO:0000287 ... Q46822 18391416 MOAD: Ki=0.12nM
    10049 2vnt:A (2.2) BS01 QGG 3.4.21.73 GO:0004252 ... P00749 17447747 MOAD: Ki=9.9nM
    PDBbind: -logKd/Ki=8.00, Ki=9.9nM
    BindingDB: Ki=9.9nM
    10050 2vnt:B (2.2) BS01 QGG 3.4.21.73 GO:0004252 ... P00749 17447747 MOAD: Ki=9.9nM
    BindingDB: Ki=9.9nM
    10051 2vnt:C (2.2) BS01 QGG 3.4.21.73 GO:0004252 ... P00749 17447747 MOAD: Ki=9.9nM
    BindingDB: Ki=9.9nM
    10052 2vnt:D (2.2) BS01 QGG 3.4.21.73 GO:0004252 ... P00749 17447747 MOAD: Ki=9.9nM
    BindingDB: Ki=9.9nM
    10053 2vnt:E (2.2) BS01 QGG 3.4.21.73 GO:0004252 ... P00749 17447747 MOAD: Ki=9.9nM
    BindingDB: Ki=9.9nM
    10054 2vnt:F (2.2) BS01 QGG 3.4.21.73 GO:0004252 ... P00749 17447747 MOAD: Ki=9.9nM
    BindingDB: Ki=9.9nM
    10055 2vnt:F (2.2) BS02 QGG 3.4.21.73 GO:0004252 ... P00749 17447747 MOAD: Ki=9.9nM
    BindingDB: Ki=9.9nM
    10056 2vnv:A (1.7) BS01 MMA ? GO:0046872 ... B4EH87 18215132 MOAD: Kd=2.75uM
    10057 2vnv:B (1.7) BS01 MMA ? GO:0046872 ... B4EH87 18215132 MOAD: Kd=2.75uM
    10058 2vnv:C (1.7) BS01 MMA ? GO:0046872 ... B4EH87 18215132 MOAD: Kd=2.75uM
    10059 2vnv:D (1.7) BS01 MMA ? GO:0046872 ... B4EH87 18215132 MOAD: Kd=2.75uM
    10060 2vnv:E (1.7) BS01 MMA ? GO:0046872 ... B4EH87 18215132 MOAD: Kd=2.75uM
    10061 2vo4:A (1.75) BS02 4NM 2.5.1.18 GO:0004364 ... O49235 19014949 PDBbind: -logKd/Ki=4.94, Kd=11.6uM
    10062 2vo5:A (2.3) BS01 VBZ 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=13uM
    PDBbind: -logKd/Ki=4.89, Ki=13uM
    BindingDB: Ki=1.3e+4nM
    10063 2vo5:B (2.3) BS01 VBZ 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=13uM
    BindingDB: Ki=1.3e+4nM
    10064 2vo7:A (1.98) BS02 M05 2.7.11.11 GO:0001669 ... P00517 18345609 MOAD: ic50=168nM
    PDBbind: -logKd/Ki=6.77, IC50=168nM
    10065 2vo7:A (1.98) BS03 M05 2.7.11.11 GO:0001669 ... P00517 18345609 MOAD: ic50=168nM
    PDBbind: -logKd/Ki=6.77, IC50=168nM
    10066 2vot:A (1.95) BS01 NHV 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=72nM
    PDBbind: -logKd/Ki=7.14, Ki=72nM
    10067 2vot:B (1.95) BS01 NHV 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=72nM
    10068 2vpl:A (2.3) BS01 rna ? N/A P27150 18778715 PDBbind: Kd=45.4nM
    10069 2vpl:C (2.3) BS01 rna ? N/A P27150 18778715 PDBbind: Kd=45.4nM
    10070 2vpn:A (1.55) BS01 4CS ? GO:0042597 ... E1VBK1 18702523 MOAD: Kd=0.19uM
    PDBbind: -logKd/Ki=6.72, Kd=0.19uM
    10071 2vpn:B (1.55) BS01 4CS ? GO:0042597 ... E1VBK1 18702523 MOAD: Kd=0.19uM
    10072 2vpo:A (1.8) BS01 6CS ? GO:0042597 ... E1VBK1 18702523 MOAD: Kd=3.8uM
    PDBbind: -logKd/Ki=5.42, Kd=3.8uM
    10073 2vpo:B (1.8) BS01 6CS ? GO:0042597 ... E1VBK1 18702523 MOAD: Kd=3.8uM
    10074 2vpp:A (2.2) BS01 GEO 2.7.1.145 GO:0004136 ... Q9XZT6 19285960 PDBbind: -logKd/Ki=6.12, IC50=0.76uM
    10075 2vqj:A (2.1) BS01 TFG 3.5.1.98 N/A P56524 18614528 PDBbind: -logKd/Ki=6.44, IC50=367nM
    10076 2vqm:A (1.8) BS01 HA3 3.5.1.98 N/A P56524 18614528 MOAD: ic50=978nM
    PDBbind: -logKd/Ki=6.01, IC50=978nM
    10077 2vqo:A (2.15) BS01 TFG 3.5.1.98 N/A P56524 18614528 MOAD: ic50=317nM
    10078 2vqo:A (2.15) BS03 TFG 3.5.1.98 N/A P56524 18614528 MOAD: ic50=317nM
    10079 2vqo:B (2.15) BS01 TFG 3.5.1.98 N/A P56524 18614528 MOAD: ic50=317nM
    10080 2vqo:B (2.15) BS02 TFG 3.5.1.98 N/A P56524 18614528 MOAD: ic50=317nM
    10081 2vqq:A (1.9) BS01 TFG 3.5.1.98 N/A P56524 18614528 MOAD: ic50=367nM
    10082 2vqq:A (1.9) BS03 TFG 3.5.1.98 N/A P56524 18614528 MOAD: ic50=367nM
    10083 2vqq:B (1.9) BS01 TFG 3.5.1.98 N/A P56524 18614528 MOAD: ic50=367nM
    10084 2vqq:B (1.9) BS02 TFG 3.5.1.98 N/A P56524 18614528 MOAD: ic50=367nM
    10085 2vqt:A (2.1) BS01 15A 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=1uM
    PDBbind: -logKd/Ki=6.00, Ki=1.0uM
    10086 2vqt:B (2.1) BS01 15A 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=1uM
    10087 2vqu:A (1.9) BS01 NOY 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=975nM
    10088 2vqu:B (1.9) BS01 NOY 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=975nM
    10089 2vqz:A (2.3) BS01 MGT ? N/A P31345 18454157 MOAD: Kd=177uM
    10090 2vqz:B (2.3) BS01 MGT ? N/A P31345 18454157 MOAD: Kd=177uM
    10091 2vqz:D (2.3) BS01 MGT ? N/A P31345 18454157 MOAD: Kd=177uM
    10092 2vqz:E (2.3) BS01 MGT ? N/A P31345 18454157 MOAD: Kd=177uM
    10093 2vqz:F (2.3) BS01 MGT ? N/A P31345 18454157 MOAD: Kd=177uM
    10094 2vr0:C (2.8) BS05 HQO 1.10.2.- GO:0005886 ... Q72EF4 18597779 PDBbind: -logKd/Ki=4.42, Ki=38uM
    10095 2vr4:A (1.8) BS01 17B 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=2.1uM
    PDBbind: -logKd/Ki=5.68, Ki=2.1uM
    10096 2vr4:B (1.8) BS01 17B 3.2.1.25 GO:0004553 ... Q8AAK6 18408714 MOAD: Ki=2.1uM
    10097 2vrj:A (1.9) BS01 NCW 3.2.1.21 GO:0004553 ... Q08638 18833549 MOAD: Kd=0.5uM
    PDBbind: -logKd/Ki=6.30, Kd=0.5uM
    10098 2vrj:B (1.9) BS01 NCW 3.2.1.21 GO:0004553 ... Q08638 18833549 MOAD: Kd=0.5uM
    10099 2vrx:A (1.86) BS01 447 2.7.11.1 GO:0004672 ... Q6DE08 18559266 PDBbind: -logKd/Ki=7.35, IC50=45nM
    BindingDB: IC50=45nM
    10100 2vrx:B (1.86) BS01 447 2.7.11.1 GO:0004672 ... Q6DE08 18559266 BindingDB: IC50=45nM
    10101 2vsr:A (2.05) BS01 9HO ? GO:0003677 ... P37231 19172745 BindingDB: Kd=2000nM
    10102 2vsr:A (2.05) BS02 9HO ? GO:0003677 ... P37231 19172745 BindingDB: Kd=2000nM
    10103 2vsr:B (2.05) BS01 9HO ? GO:0003677 ... P37231 19172745 BindingDB: Kd=2000nM
    10104 2vt3:A (2.0) BS01 ATP ? GO:0003677 ... O05521 18485070 PDBbind: -logKd/Ki=4.15, Kd=0.07mM
    10105 2vt3:B (2.0) BS01 ATP ? GO:0003677 ... O05521 18485070 PDBbind: -logKd/Ki=4.15, Kd=0.07mM
    10106 2vt5:A (2.2) BS01 ROK 3.1.3.11 GO:0000122 ... P09467 18650089 BindingDB: IC50=1600nM
    10107 2vt5:B (2.2) BS01 ROK 3.1.3.11 GO:0000122 ... P09467 18650089 BindingDB: IC50=1600nM
    10108 2vt5:C (2.2) BS01 ROK 3.1.3.11 GO:0000122 ... P09467 18650089 BindingDB: IC50=1600nM
    10109 2vt5:D (2.2) BS01 ROK 3.1.3.11 GO:0000122 ... P09467 18650089 BindingDB: IC50=1600nM
    10110 2vt5:E (2.2) BS01 ROK 3.1.3.11 GO:0000122 ... P09467 18650089 BindingDB: IC50=1600nM
    10111 2vt5:F (2.2) BS01 ROK 3.1.3.11 GO:0000122 ... P09467 18650089 BindingDB: IC50=1600nM
    10112 2vt5:G (2.2) BS01 ROK 3.1.3.11 GO:0000122 ... P09467 18650089 BindingDB: IC50=1600nM
    10113 2vt5:H (2.2) BS01 ROK 3.1.3.11 GO:0000122 ... P09467 18650089 BindingDB: IC50=1600nM
    10114 2vta:A (2.0) BS01 LZ1 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=185uM
    PDBbind: -logKd/Ki=3.73, IC50=185uM
    BindingDB: IC50=185000nM
    10115 2vtd:A (1.94) BS01 LKM 6.3.2.9 GO:0005515 ... P14900 19007109 MOAD: ic50=85uM
    PDBbind: -logKd/Ki=4.07, IC50=85uM
    BindingDB: Kd=7000nM, IC50=85000nM
    10116 2vte:A (2.2) BS01 IK4 6.3.2.9 GO:0005515 ... P14900 19007109 MOAD: ic50=122uM
    PDBbind: -logKd/Ki=3.91, IC50=122uM
    BindingDB: IC50=122000nM
    10117 2vth:A (1.9) BS01 LZ2 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=120uM
    PDBbind: -logKd/Ki=3.92, IC50=120uM
    BindingDB: IC50=120000nM
    10118 2vti:A (2.0) BS01 LZ3 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=0.66uM
    PDBbind: -logKd/Ki=6.18, IC50=660nM
    BindingDB: IC50=660nM
    10119 2vtj:A (2.2) BS01 LZ4 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=1.9uM
    PDBbind: -logKd/Ki=5.72, IC50=1.9uM
    BindingDB: IC50=9100nM
    10120 2vtl:A (2.0) BS01 LZ5 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=97uM
    PDBbind: -logKd/Ki=4.01, IC50=97uM
    BindingDB: IC50=97000nM
    10121 2vtm:A (2.25) BS01 LZM 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50~1mM
    PDBbind: -logKd/Ki=3.00, IC50=1mM
    10122 2vtn:A (2.2) BS01 LZ7 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=0.85uM
    PDBbind: -logKd/Ki=6.07, IC50=850nM
    BindingDB: IC50=850nM
    10123 2vto:A (2.19) BS01 LZ8 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=0.14uM
    PDBbind: -logKd/Ki=6.85, IC50=140nM
    BindingDB: IC50=140nM
    10124 2vtp:A (2.15) BS01 LZ9 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=0.003uM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3.0nM
    10125 2vtq:A (1.9) BS01 LZA 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=0.14uM
    PDBbind: -logKd/Ki=6.85, IC50=140nM
    BindingDB: IC50=140nM
    10126 2vtr:A (1.89) BS01 LZB 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=1.5uM
    PDBbind: -logKd/Ki=5.82, IC50=1.5uM
    BindingDB: IC50=1500nM
    10127 2vts:A (1.9) BS01 LZC 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=0.03uM
    PDBbind: -logKd/Ki=7.52, IC50=30nM
    BindingDB: IC50=30nM
    10128 2vtt:A (1.68) BS01 LZD 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=0.044uM
    PDBbind: -logKd/Ki=7.36, IC50=44nM
    BindingDB: IC50=44nM
    10129 2vtz:A (2.3) BS01 COA 2.3.1.9 GO:0003985 ... P07097 19016856 MOAD: Kd=307uM
    10130 2vtz:B (2.3) BS01 COA 2.3.1.9 GO:0003985 ... P07097 19016856 MOAD: Kd=307uM
    10131 2vtz:C (2.3) BS01 COA 2.3.1.9 GO:0003985 ... P07097 19016856 MOAD: Kd=307uM
    10132 2vtz:D (2.3) BS01 COA 2.3.1.9 GO:0003985 ... P07097 19016856 MOAD: Kd=307uM
    10133 2vu3:A (1.85) BS01 LZE 2.7.11.22 GO:0000082 ... P24941 18656911 MOAD: ic50=0.047uM
    PDBbind: -logKd/Ki=7.33, IC50=47nM
    BindingDB: IC50=47nM, Ki=510nM, Kd=30nM
    10134 2vuk:B (1.5) BS01 P83 ? GO:0000976 ... P04637 18650397 MOAD: Kd=125uM
    PDBbind: -logKd/Ki=3.90, Kd=125uM
    BindingDB: Kd=140000nM
    10135 2vur:A (2.2) BS01 YX1 3.2.1.169 N/A Q0TR53 18721751 MOAD: ic50=30uM
    PDBbind: -logKd/Ki=4.52, IC50=30uM
    10136 2vur:B (2.2) BS01 YX1 3.2.1.169 N/A Q0TR53 18721751 MOAD: ic50=30uM
    10137 2vv9:A (1.9) BS01 IM9 2.7.11.22 GO:0000082 ... P24941 18617397 MOAD: ic50=0.017uM
    PDBbind: -logKd/Ki=7.77, IC50=0.017uM
    BindingDB: IC50=17nM
    10138 2vvb:X (1.66) BS01 BCT 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 19520834 BindingDB: Ki=85000000nM
    10139 2vvc:A (1.95) BS01 LZF 3.4.21.6 GO:0004252 ... P00742 19200624 PDBbind: -logKd/Ki=8.52, Ki=3nM
    BindingDB: Ki=3nM
    10140 2vvc:B (1.95) BS01 LZF 3.4.21.6 GO:0004252 ... P00742 19200624 BindingDB: Ki=3nM
    10141 2vvn:A (1.85) BS01 NHT 3.2.1.169 N/A Q89ZI2 18587388 PDBbind: -logKd/Ki=7.30, Kd=50nM
    10142 2vvo:A (1.85) BS01 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    PDBbind: -logKd/Ki=2.20, IC50=6.3mM
    10143 2vvo:A (1.85) BS02 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    PDBbind: -logKd/Ki=2.20, IC50=6.3mM
    10144 2vvo:B (1.85) BS01 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    PDBbind: -logKd/Ki=2.20, IC50=6.3mM
    10145 2vvo:B (1.85) BS02 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    PDBbind: -logKd/Ki=2.20, IC50=6.3mM
    10146 2vvo:C (1.85) BS01 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    10147 2vvo:C (1.85) BS02 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    10148 2vvo:D (1.85) BS01 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    10149 2vvo:D (1.85) BS02 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    10150 2vvo:E (1.85) BS01 A6P 5.3.1.6 GO:0004751 ... P9WKD7 18640127 MOAD: ic50=6.3mM
    10151 2vvs:A (2.24) BS01 OAN 3.2.1.169 N/A Q89ZI2 18842583 MOAD: Ki=46nM
    PDBbind: -logKd/Ki=7.34, Ki=46nM
    10152 2vvt:A (1.65) BS01 I24 5.1.1.3 GO:0008360 ... Q836J0 18614367 MOAD: ic50=5.8uM
    PDBbind: -logKd/Ki=5.24, IC50=5.8uM
    BindingDB: IC50=5800nM
    10153 2vvt:B (1.65) BS01 I24 5.1.1.3 GO:0008360 ... Q836J0 18614367 MOAD: ic50=5.8uM
    BindingDB: IC50=5800nM
    10154 2vvu:A (2.3) BS01 H22 3.4.21.6 GO:0004252 ... P00742 19200624 PDBbind: -logKd/Ki=8.10, Ki=8nM
    BindingDB: Ki=8nM
    10155 2vvv:A (1.73) BS01 H21 3.4.21.6 GO:0004252 ... P00742 19200624 PDBbind: -logKd/Ki=8.22, Ki=6nM
    BindingDB: Ki=6nM
    10156 2vvz:A (2.5) BS01 DAN 3.2.1.18 GO:0004308 ... P62575 18765901 BindingDB: IC50=4800nM, Ki=1.6e+3nM
    10157 2vvz:B (2.5) BS01 DAN 3.2.1.18 GO:0004308 ... P62575 18765901 BindingDB: IC50=4800nM, Ki=1.6e+3nM
    10158 2vw1:A (2.39) BS01 DAN 3.2.1.18 GO:0004308 ... Q54727 18835278 MOAD: Ki=0.3mM
    PDBbind: -logKd/Ki=3.52, Ki=0.3mM
    10159 2vw2:A (1.7) BS01 NHE 3.2.1.18 GO:0004308 ... Q54727 18835278 PDBbind: -logKd/Ki=3.30, Ki=0.5mM
    10160 2vw2:A (1.7) BS02 NHE 3.2.1.18 GO:0004308 ... Q54727 18835278 PDBbind: -logKd/Ki=3.30, Ki=0.5mM
    10161 2vw5:A (1.9) BS01 BC6 ? GO:0005524 ... P02829 18800759 MOAD: Kd=3nM
    PDBbind: -logKd/Ki=8.52, Kd=3nM
    10162 2vw5:B (1.9) BS01 BC6 ? GO:0005524 ... P02829 18800759 MOAD: Kd=3nM
    10163 2vw5:C (1.9) BS01 BC6 ? GO:0005524 ... P02829 18800759 MOAD: Kd=3nM
    10164 2vw5:D (1.9) BS01 BC6 ? GO:0005524 ... P02829 18800759 MOAD: Kd=3nM
    10165 2vwc:A (2.4) BS01 BC2 ? GO:0005524 ... P02829 18357975 MOAD: Kd=0.24uM
    PDBbind: -logKd/Ki=6.62, Kd=0.24uM
    10166 2vwj:A (2.78) BS01 dna 2.7.7.7 GO:0000166 ... P56689 18614176 PDBbind: Kd=8nM
    10167 2vwl:A (1.8) BS01 LZH 3.4.21.6 GO:0004252 ... P00742 19200624 PDBbind: -logKd/Ki=7.02, Ki=95nM
    BindingDB: Ki=95nM
    10168 2vwm:A (1.96) BS01 LZI 3.4.21.6 GO:0004252 ... P00742 19200624 PDBbind: -logKd/Ki=7.03, Ki=93nM
    BindingDB: Ki=93nM
    10169 2vwm:B (1.96) BS01 LZI 3.4.21.6 GO:0004252 ... P00742 19200624 BindingDB: Ki=93nM
    10170 2vwn:A (1.61) BS01 H25 3.4.21.6 GO:0004252 ... P00742 19200624 PDBbind: -logKd/Ki=8.00, Ki=10nM
    BindingDB: Ki=10nM
    10171 2vwn:L (1.61) BS01 H25 3.4.21.6 N/A P00742 19200624 BindingDB: Ki=10nM
    10172 2vwo:A (1.6) BS01 LZG 3.4.21.6 GO:0004252 ... P00742 19200624 PDBbind: -logKd/Ki=7.51, Ki=31nM
    BindingDB: Ki=31nM
    10173 2vwo:L (1.6) BS01 LZG 3.4.21.6 N/A P00742 19200624 BindingDB: Ki=31nM
    10174 2vwu:A (2.0) BS01 7X1 2.7.10.1 GO:0004672 ... P54760 18434142 MOAD: ic50=0.35uM
    PDBbind: -logKd/Ki=6.46, IC50=0.35uM
    BindingDB: IC50=350nM
    10175 2vwv:A (1.9) BS01 7X3 2.7.10.1 GO:0004672 ... P54760 18434142 MOAD: ic50=16uM
    PDBbind: -logKd/Ki=4.80, IC50=16uM
    BindingDB: IC50=16000nM
    10176 2vww:A (1.9) BS01 7X2 2.7.10.1 GO:0004672 ... P54760 18434142 MOAD: ic50=0.24uM
    PDBbind: -logKd/Ki=6.62, IC50=0.24uM
    BindingDB: IC50=240nM
    10177 2vwx:A (1.65) BS01 7X4 2.7.10.1 GO:0004672 ... P54760 18851911 MOAD: ic50=0.04uM
    PDBbind: -logKd/Ki=7.40, IC50=0.04uM
    BindingDB: IC50=40nM
    10178 2vwy:A (1.65) BS01 7X5 2.7.10.1 GO:0004672 ... P54760 18851911 MOAD: ic50=0.09uM
    PDBbind: -logKd/Ki=7.05, IC50=0.09uM
    BindingDB: IC50=90nM
    10179 2vwz:A (1.65) BS01 7X6 2.7.10.1 GO:0004672 ... P54760 18851911 MOAD: ic50=0.794uM
    PDBbind: -logKd/Ki=6.10, IC50=0.794uM
    BindingDB: IC50=741nM
    10180 2vx0:A (2.1) BS01 7X7 2.7.10.1 GO:0004672 ... P54760 18434142 MOAD: ic50=0.58uM
    PDBbind: -logKd/Ki=6.24, IC50=0.58uM
    BindingDB: IC50=580nM
    10181 2vx1:A (1.65) BS01 7X8 2.7.10.1 GO:0004672 ... P54760 18851911 MOAD: ic50=0.22uM
    PDBbind: -logKd/Ki=6.66, IC50=0.220uM
    BindingDB: IC50=900nM
    10182 2vx9:A (1.65) BS01 RBF ? GO:0005737 ... B0R5M0 19224924 PDBbind: -logKd/Ki=7.44, Kd=36nM
    10183 2vxa:A (2.6) BS01 RBF ? GO:0000166 ... A1WUH0 19224924 PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    10184 2vxa:A (2.6) BS02 RBF ? GO:0000166 ... A1WUH0 19224924 PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    10185 2vxa:C (2.6) BS01 RBF ? GO:0000166 ... A1WUH0 19224924 PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    10186 2vxa:C (2.6) BS02 RBF ? GO:0000166 ... A1WUH0 19224924 PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    10187 2vxa:E (2.6) BS01 RBF ? GO:0000166 ... A1WUH0 19224924 PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    10188 2vxa:E (2.6) BS02 RBF ? GO:0000166 ... A1WUH0 19224924 PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    10189 2vxa:F (2.6) BS01 RBF ? GO:0000166 ... A1WUH0 19224924 PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    10190 2vxa:F (2.6) BS02 RBF ? GO:0000166 ... A1WUH0 19224924 PDBbind: -logKd/Ki=5.60, Kd=2.5uM
    10191 2vxn:A (0.82) BS01 PGH 5.3.1.1 GO:0004807 ... P48499 20235230 PDBbind: -logKd/Ki=5.00, Kd=10uM
    10192 2vy1:A (2.104) BS01 dna ? GO:0003677 ... Q00958 18784751 PDBbind: Kd=95nM
    10193 2vye:A (4.1) BS01 dna 3.6.4.12 GO:0003677 ... Q5KU75 19074952 PDBbind: Kd=46.9nM
    10194 2vye:B (4.1) BS01 dna 3.6.4.12 GO:0003677 ... Q5KU75 19074952 PDBbind: Kd=46.9nM
    10195 2vyt:A (1.9) BS01 MLZ ? GO:0005634 ... Q9UQR0 18706910 MOAD: Kd=1.84mM
    PDBbind: -logKd/Ki=2.74, Kd=1.84mM
    10196 2vyt:B (1.9) BS01 MLZ ? GO:0005634 ... Q9UQR0 18706910 MOAD: Kd=1.84mM
    10197 2vz0:A (1.9) BS02 D64 1.5.1.33 GO:0000166 ... O76290 19748480 MOAD: Ki=9.8nM
    10198 2vz0:B (1.9) BS02 D64 1.5.1.33 GO:0000166 ... O76290 19748480 MOAD: Ki=9.8nM
    10199 2vz0:C (1.9) BS02 D64 1.5.1.33 GO:0000166 ... O76290 19748480 MOAD: Ki=9.8nM
    10200 2vz0:D (1.9) BS02 D64 1.5.1.33 GO:0000166 ... O76290 19748480 MOAD: Ki=9.8nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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