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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    8401 2n14:A (-1.00) BS01 49H ? GO:0005634 ... O15151 26812210 PDBbind: -logKd/Ki=5.33, Kd=4.7uM
    8402 2n27:A (-1.00) BS04 4DY ? GO:0000086 ... P0DP23 27339229 PDBbind: -logKd/Ki=6.55, Kd=280nM
    8403 2n7b:A (-1.00) BS01 G6S ? N/A Q9NYZ4 27357658 PDBbind: -logKd/Ki=3.55, Kd=279uM
    8404 2n7b:A (-1.00) BS02 SIA ? N/A Q9NYZ4 27357658 PDBbind: -logKd/Ki=3.55, Kd=279uM
    8405 2n82:B (-1.00) BS01 rna ? GO:0000381 ... Q9NWB1 27001519 PDBbind: Kd=21.5nM
    8406 2n8a:A (-1.00) BS01 dna 2.4.2.-
    2.4.2.30    		 GO:0003677 ... P09874 26626479 PDBbind: Kd=95nM
    8407 2nad:A (2.05) BS02 NAD 1.17.1.9 GO:0005737 ... P33160 8114093 MOAD: Ki=0.1uM
    8408 2nad:B (2.05) BS02 NAD 1.17.1.9 GO:0005737 ... P33160 8114093 MOAD: Ki=0.1uM
    8409 2ndo:A (-1.00) BS01 SFQ ? GO:0003756 ... P0AEG4 27778134 PDBbind: -logKd/Ki=3.25, Kd=565uM
    8410 2nmt:A (2.9) BS02 MIM 2.3.1.97 GO:0004379 ... P14743 9846880 BindingDB: IC50=24nM
    8411 2nmx:A (1.55) BS02 M25 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 17407288 MOAD: Kd=2.7uM
    PDBbind: -logKd/Ki=5.57, Kd=2.7uM
    8412 2nmx:B (1.55) BS02 M25 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 17407288 MOAD: Kd=2.7uM
    8413 2nmy:A (1.1) BS01 ROC 3.4.23.16 GO:0004190 ... Q7SSI0 17243183 PDBbind: -logKd/Ki=8.37, Ki=4.3nM
    8414 2nmy:B (1.1) BS01 ROC 3.4.23.16 GO:0004190 ... Q7SSI0 17243183 PDBbind: -logKd/Ki=8.37, Ki=4.3nM
    8415 2nmz:A (0.97) BS01 ROC 3.4.23.16 GO:0004190 ... Q7SSI0 17243183 PDBbind: -logKd/Ki=8.37, Ki=4.3nM
    8416 2nmz:B (0.97) BS01 ROC 3.4.23.16 GO:0004190 ... Q7SSI0 17243183 PDBbind: -logKd/Ki=8.37, Ki=4.3nM
    8417 2nn1:A (1.65) BS02 M28 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 17407288 MOAD: Kd=1.5uM
    PDBbind: -logKd/Ki=5.82, Kd=1.5uM
    BindingDB: Ki=6690nM
    8418 2nn1:B (1.65) BS02 M28 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 17407288 MOAD: Kd=1.5uM
    BindingDB: Ki=6690nM
    8419 2nn7:A (1.85) BS02 M29 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 17407288 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    8420 2nn7:B (1.85) BS02 M29 4.2.1.1
    4.2.1.69    		 GO:0004064 ... P00915 17407288 MOAD: Kd=0.3uM
    8421 2nnd:A (1.6) BS01 PRZ ? GO:0036094 ... P02762 17991731 MOAD: Kd=0.87uM
    PDBbind: -logKd/Ki=6.06, Kd=0.87uM
    8422 2nng:A (1.2) BS02 ZYX 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17407288 MOAD: Kd=4.4uM
    PDBbind: -logKd/Ki=5.36, Kd=4.4uM
    BindingDB: Ki=160nM, IC50=3100nM
    8423 2nni:A (2.8) BS02 MTK 1.14.14.1 GO:0002933 ... P10632 18413310 BindingDB: IC50=1000nM
    8424 2nnj:A (2.28) BS02 225 1.14.14.1 GO:0002933 ... P10632 18413310 MOAD: Ki=90nM
    8425 2nnk:A (1.25) BS01 ROC 3.4.23.16 GO:0004190 ... Q7SSI0 17243183 PDBbind: -logKd/Ki=8.37, Ki=4.3nM
    8426 2nnk:B (1.25) BS01 ROC 3.4.23.16 GO:0004190 ... Q7SSI0 17243183 PDBbind: -logKd/Ki=8.37, Ki=4.3nM
    8427 2nno:A (1.01) BS02 M28 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17407288 MOAD: Kd=0.4uM
    PDBbind: -logKd/Ki=6.40, Kd=0.4uM
    BindingDB: Ki=495nM
    8428 2nno:A (1.01) BS03 M28 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17407288 MOAD: Kd=0.4uM
    PDBbind: -logKd/Ki=6.40, Kd=0.4uM
    BindingDB: Ki=495nM
    8429 2nnp:A (1.2) BS01 ROC 3.4.23.16 GO:0004190 ... Q7SSI0 17243183 PDBbind: -logKd/Ki=8.37, Ki=4.3nM
    8430 2nnp:B (1.2) BS01 ROC 3.4.23.16 GO:0004190 ... Q7SSI0 17243183 PDBbind: -logKd/Ki=8.37, Ki=4.3nM
    8431 2nnq:A (1.8) BS01 T4B ? GO:0005324 ... P15090 17502136 MOAD: Ki<2nM
    PDBbind: -logKd/Ki=8.70, Ki=2nM
    BindingDB: Kd=2050nM, Ki=220nM, IC50=221nM
    8432 2nns:A (1.03) BS02 M25 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17407288 MOAD: Kd=0.9uM
    PDBbind: -logKd/Ki=6.05, Kd=0.9uM
    8433 2nns:A (1.03) BS03 M25 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17407288 MOAD: Kd=0.9uM
    PDBbind: -logKd/Ki=6.05, Kd=0.9uM
    8434 2nnv:A (1.1) BS02 M29 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17407288 MOAD: Kd=0.03uM
    PDBbind: -logKd/Ki=7.52, Kd=0.03uM
    8435 2nnv:A (1.1) BS03 M29 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17407288 MOAD: Kd=0.03uM
    PDBbind: -logKd/Ki=7.52, Kd=0.03uM
    8436 2no3:A (3.2) BS02 859 2.7.11.24 GO:0004672 ... P45983 17107797 PDBbind: -logKd/Ki=8.05, IC50=9nM
    BindingDB: IC50=170nM
    8437 2no3:B (3.2) BS02 859 2.7.11.24 GO:0004672 ... P45983 17107797 BindingDB: IC50=170nM
    8438 2noe:A (2.2) BS01 dna 3.2.2.-
    4.2.99.18    		 GO:0000978 ... O15527 17114185 PDBbind: Kd=15nM
    8439 2noe:A (2.2) BS02 dna 3.2.2.-
    4.2.99.18    		 GO:0000978 ... O15527 17114185 PDBbind: Kd=15nM
    8440 2nos:A (2.3) BS02 AGU 1.14.13.39 GO:0004517 ... P29477 9334294 BindingDB: IC50=26550nM
    8441 2np2:A (3.02) BS01 dna ? GO:0003677 ... Q57267 17244195 PDBbind: Kd=55nM
    8442 2np2:A (3.02) BS02 dna ? GO:0003677 ... Q57267 17244195 PDBbind: Kd=55nM
    8443 2np2:B (3.02) BS01 dna ? GO:0003677 ... Q57267 17244195 PDBbind: Kd=55nM
    8444 2np2:B (3.02) BS02 dna ? GO:0003677 ... Q57267 17244195 PDBbind: Kd=55nM
    8445 2np8:A (2.25) BS01 CC3 2.7.11.1 GO:0000212 ... O14965 17157005 MOAD: ic50=42nM
    PDBbind: -logKd/Ki=7.38, IC50=42nM
    BindingDB: IC50=42nM
    8446 2np9:A (2.45) BS01 YE1 1.13.11.80 GO:0006635 ... Q8KLK7 17507985 MOAD: Ki=2.7uM
    PDBbind: -logKd/Ki=5.57, Ki=2.7uM
    8447 2np9:B (2.45) BS01 YE1 1.13.11.80 GO:0006635 ... Q8KLK7 17507985 MOAD: Ki=2.7uM
    8448 2np9:C (2.45) BS01 YE1 1.13.11.80 GO:0006635 ... Q8KLK7 17507985 MOAD: Ki=2.7uM
    8449 2npa:A (2.3) BS02 MMB ? GO:0003677 ... Q07869 17157019 BindingDB: EC50=19nM
    8450 2npa:C (2.3) BS02 MMB ? GO:0003677 ... Q07869 17157019 BindingDB: EC50=19nM
    8451 2nq6:A (1.5) BS04 HM4 3.4.11.18 GO:0006508 ... P53582 17114291 MOAD: ic50=1.5uM
    PDBbind: -logKd/Ki=5.82, IC50=1.5uM
    BindingDB: EC50=>40000nM, IC50=400nM
    8452 2nq7:A (1.6) BS03 HM5 3.4.11.18 GO:0006508 ... P53582 17114291 MOAD: ic50=2.9uM
    PDBbind: -logKd/Ki=5.54, IC50=2.9uM
    BindingDB: IC50=2900nM
    8453 2nq8:A (2.5) BS01 ZID ? GO:0004318 ... Q9BJJ9 17567585 MOAD: ic50=320nM
    8454 2nq8:B (2.5) BS01 ZID ? GO:0004318 ... Q9BJJ9 17567585 MOAD: ic50=320nM
    8455 2nq9:A (1.45) BS01 dna 3.1.21.2 GO:0003677 ... P0A6C1 18408731 PDBbind: Kd=97nM
    8456 2nq9:A (1.45) BS02 dna 3.1.21.2 GO:0003677 ... P0A6C1 18408731 PDBbind: Kd=97nM
    8457 2nq9:A (1.45) BS03 dna 3.1.21.2 GO:0003677 ... P0A6C1 18408731 PDBbind: Kd=97nM
    8458 2nqg:A (2.04) BS03 NQG 3.4.22.52 GO:0004198 ... P97571 17218315 PDBbind: -logKd/Ki=6.48, IC50=333nM
    8459 2nqi:A (2.04) BS03 NQI 3.4.22.52 GO:0004198 ... P97571 17218315 PDBbind: -logKd/Ki=6.11, IC50=784nM
    8460 2nqj:A (2.45) BS01 dna 3.1.21.2 GO:0003677 ... P0A6C1 18408731 PDBbind: Kd=114nM
    8461 2nqj:A (2.45) BS02 dna 3.1.21.2 GO:0003677 ... P0A6C1 18408731 PDBbind: Kd=114nM
    8462 2nr0:A (3.9) BS01 rna 5.4.99.12 GO:0000049 ... P07649 17466622 PDBbind: Kd=1.05uM
    8463 2nr0:A (3.9) BS02 rna 5.4.99.12 GO:0000049 ... P07649 17466622 PDBbind: Kd=1.05uM
    8464 2nr0:A (3.9) BS03 rna 5.4.99.12 GO:0000049 ... P07649 17466622 PDBbind: Kd=1.05uM
    8465 2nr0:B (3.9) BS01 rna 5.4.99.12 GO:0000049 ... P07649 17466622 PDBbind: Kd=1.05uM
    8466 2nr0:B (3.9) BS02 rna 5.4.99.12 GO:0000049 ... P07649 17466622 PDBbind: Kd=1.05uM
    8467 2nr0:C (3.9) BS01 rna 5.4.99.12 GO:0000049 ... P07649 17466622 PDBbind: Kd=1.05uM
    8468 2nr0:C (3.9) BS02 rna 5.4.99.12 GO:0000049 ... P07649 17466622 PDBbind: Kd=1.05uM
    8469 2nr0:D (3.9) BS01 rna 5.4.99.12 GO:0000049 ... P07649 17466622 PDBbind: Kd=1.05uM
    8470 2nr0:D (3.9) BS02 rna 5.4.99.12 GO:0000049 ... P07649 17466622 PDBbind: Kd=1.05uM
    8471 2nru:A (2.0) BS01 T12 2.7.11.1 GO:0000287 ... Q9NWZ3 17161373 BindingDB: Ki=1.2nM
    8472 2nru:B (2.0) BS01 T12 2.7.11.1 GO:0000287 ... Q9NWZ3 17161373 BindingDB: Ki=1.2nM
    8473 2nru:C (2.0) BS01 T12 2.7.11.1 GO:0000287 ... Q9NWZ3 17161373 BindingDB: Ki=1.2nM
    8474 2nru:D (2.0) BS01 T12 2.7.11.1 GO:0000287 ... Q9NWZ3 17161373 BindingDB: Ki=1.2nM
    8475 2nsd:A (1.9) BS02 4PI 1.3.1.9 GO:0004318 ... P9WGR1 17723305 MOAD: ic50=5.16uM
    BindingDB: IC50=5160nM
    8476 2nsd:B (1.9) BS02 4PI 1.3.1.9 GO:0004318 ... P9WGR1 17723305 MOAD: ic50=5.16uM
    BindingDB: IC50=5160nM
    8477 2nsi:A (3.0) BS03 ITU 1.14.13.39 GO:0004517 ... P35228 10409685 BindingDB: IC50=160nM
    8478 2nsi:B (3.0) BS03 ITU 1.14.13.39 GO:0004517 ... P35228 10409685 BindingDB: IC50=160nM
    8479 2nsi:C (3.0) BS03 ITU 1.14.13.39 GO:0004517 ... P35228 10409685 BindingDB: IC50=160nM
    8480 2nsi:D (3.0) BS04 ITU 1.14.13.39 GO:0004517 ... P35228 10409685 BindingDB: IC50=160nM
    8481 2nsj:A (2.31) BS01 C2R 5.4.99.18 GO:0003824 ... P0AG18 17298082 MOAD: Kd=16.3uM
    PDBbind: -logKd/Ki=4.79, Kd=16.3uM
    8482 2nsl:A (2.0) BS01 C2R 5.4.99.18 GO:0003824 ... P0AG18 17298082 MOAD: Kd=20.9uM
    PDBbind: -logKd/Ki=4.68, Kd=20.9uM
    8483 2nsx:B (2.11) BS01 IFM 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46    		 GO:0004336 ... P04062 17187079 MOAD: ic50=59nM
    PDBbind: -logKd/Ki=7.20, IC50=0.063uM
    BindingDB: Ki=1.70nM, IC50=8.20nM
    8484 2nsx:D (2.11) BS01 IFM 2.4.1.-
    3.2.1.-
    3.2.1.45
    3.2.1.46    		 GO:0004336 ... P04062 17187079 MOAD: ic50=59nM
    BindingDB: Ki=1.70nM, IC50=8.20nM
    8485 2nt7:A (2.1) BS01 902 3.1.3.48 GO:0004725 ... P18031 17336064 MOAD: Ki=0.3uM
    PDBbind: -logKd/Ki=6.52, Ki=0.30uM
    8486 2nta:A (2.1) BS01 521 3.1.3.48 GO:0004725 ... P18031 17336064 MOAD: Ki=16uM
    PDBbind: -logKd/Ki=4.80, Ki=16uM
    8487 2ntc:A (2.4) BS01 dna ? GO:0003688 ... Q98ZP7 17253903 PDBbind: Kd=60nM
    8488 2ntc:A (2.4) BS02 dna ? GO:0003688 ... Q98ZP7 17253903 PDBbind: Kd=60nM
    8489 2ntc:B (2.4) BS01 dna ? GO:0003688 ... Q98ZP7 17253903 PDBbind: Kd=60nM
    8490 2ntc:B (2.4) BS02 dna ? GO:0003688 ... Q98ZP7 17253903 PDBbind: Kd=60nM
    8491 2ntf:H (3.18) BS01 OHM ? N/A Q99LC4 17400249 PDBbind: -logKd/Ki=6.52, Kd=300nM
    8492 2ntf:L (3.18) BS01 OHM N/A N/A N/A 17400249 PDBbind: -logKd/Ki=6.52, Kd=300nM
    8493 2ntj:A (2.5) BS01 P1H 1.3.1.9 GO:0004318 ... P9WGR1 17227913 MOAD: Ki=2nM
    8494 2ntj:B (2.5) BS01 P1H 1.3.1.9 GO:0004318 ... P9WGR1 17227913 MOAD: Ki=2nM
    8495 2ntv:A (2.1) BS01 P1H 1.3.1.9 GO:0004318 ... Q9CBM1 17227913 MOAD: Ki=11nM
    8496 2ntv:B (2.1) BS01 P1H 1.3.1.9 GO:0004318 ... Q9CBM1 17227913 MOAD: Ki=11nM
    8497 2ntz:A (3.35) BS01 dna ? N/A Q38420 17293348 PDBbind: Kd=49nM
    8498 2ntz:A (3.35) BS02 dna ? N/A Q38420 17293348 PDBbind: Kd=49nM
    8499 2ntz:B (3.35) BS01 dna ? N/A Q38420 17293348 PDBbind: Kd=49nM
    8500 2ntz:B (3.35) BS02 dna ? N/A Q38420 17293348 PDBbind: Kd=49nM
    8501 2nv6:A (1.9) BS01 ZID 1.3.1.9 GO:0004318 ... P9WGR1 16906155 MOAD: ic50=323nM
    8502 2nv7:A (2.1) BS02 555 ? GO:0003677 ... Q92731 17188490 MOAD: ic50=5nM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    8503 2nv7:B (2.1) BS02 555 ? GO:0003677 ... Q92731 17188490 MOAD: ic50=5nM
    8504 2nvc:A (1.65) BS02 ITA 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 17418233 MOAD: ic50=0.14uM
    BindingDB: IC50=550nM
    8505 2nvd:A (1.55) BS02 ITB 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 17418233 MOAD: ic50=0.55uM
    BindingDB: IC50=140nM
    8506 2nvd:A (1.55) BS03 ITB 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 17418233 MOAD: ic50=0.55uM
    BindingDB: IC50=140nM
    8507 2nvd:A (1.55) BS04 ITB 1.1.1.21
    1.1.1.300
    1.1.1.372
    1.1.1.54    		 GO:0001523 ... P15121 17418233 MOAD: ic50=0.55uM
    BindingDB: IC50=140nM
    8508 2nw4:A (3.0) BS01 8NH ? N/A P15207 17008401 PDBbind: -logKd/Ki=8.68, Ki=2.11nM
    8509 2nwl:A (2.96) BS01 ASP ? GO:0005283 ... O59010 17230192 PDBbind: -logKd/Ki=8.70, Kd=2nM
    BindingDB: Kd=1.000000nM
    8510 2nwl:B (2.96) BS01 ASP ? GO:0005283 ... O59010 17230192 BindingDB: Kd=1.000000nM
    8511 2nwl:C (2.96) BS01 ASP ? GO:0005283 ... O59010 17230192 BindingDB: Kd=1.000000nM
    8512 2nws:A (1.8) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=5.44uM
    8513 2nws:B (1.8) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=5.44uM
    8514 2nww:A (3.2) BS01 TB1 ? GO:0005283 ... O59010 17230192 PDBbind: -logKd/Ki=5.48, IC50=3.3uM
    BindingDB: Kd=100nM
    8515 2nww:B (3.2) BS01 TB1 ? GO:0005283 ... O59010 17230192 BindingDB: Kd=100nM
    8516 2nww:C (3.2) BS01 TB1 ? GO:0005283 ... O59010 17230192 BindingDB: Kd=100nM
    8517 2nwx:A (3.29) BS03 ASP ? GO:0005283 ... O59010 17230192 BindingDB: Kd=1.000000nM
    8518 2nwx:B (3.29) BS01 ASP ? GO:0005283 ... O59010 17230192 BindingDB: Kd=1.000000nM
    8519 2nwx:C (3.29) BS01 ASP ? GO:0005283 ... O59010 17230192 BindingDB: Kd=1.000000nM
    8520 2nx1:A (1.8) BS01 RP5 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=0.02uM
    8521 2nx1:B (1.8) BS01 RP5 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=0.02uM
    8522 2nx3:A (2.1) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=17uM
    8523 2nx3:B (2.1) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=17uM
    8524 2nx3:C (2.1) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=17uM
    8525 2nx3:E (2.1) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=17uM
    8526 2nx3:F (2.1) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=17uM
    8527 2nx3:G (2.1) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=17uM
    8528 2nx3:H (2.1) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=17uM
    8529 2nx3:I (2.1) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=17uM
    8530 2nx3:J (2.1) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=17uM
    8531 2nx3:K (2.1) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=17uM
    8532 2nx3:L (2.1) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=17uM
    8533 2nxe:A (1.75) BS01 SAM 2.1.1.- GO:0005515 ... Q84BQ9 17215866 MOAD: Kd=5.5uM
    8534 2nxe:B (1.75) BS01 SAM 2.1.1.- GO:0005515 ... Q84BQ9 17215866 MOAD: Kd=5.5uM
    8535 2nxg:A (1.95) BS02 A5P 2.5.1.55 GO:0005737 ... O66496 17381075 MOAD: Kd=17uM
    8536 2nyr:A (2.06) BS02 SVR 2.3.1.- GO:0036054 ... Q9NXA8 17355872 PDBbind: -logKd/Ki=4.66, IC50=22uM
    BindingDB: IC50=25000nM
    8537 2nyr:B (2.06) BS01 SVR 2.3.1.- GO:0036054 ... Q9NXA8 17355872 PDBbind: -logKd/Ki=4.66, IC50=22uM
    BindingDB: IC50=25000nM
    8538 2nz5:A (2.35) BS02 226 1.14.19.69 GO:0004497 ... Q9KZF5 17614370 MOAD: Kd=10.5uM
    8539 2nz5:A (2.35) BS03 226 1.14.19.69 GO:0004497 ... Q9KZF5 17614370 MOAD: Kd=10.5uM
    8540 2nz5:B (2.35) BS02 226 1.14.19.69 GO:0004497 ... Q9KZF5 17614370 MOAD: Kd=10.5uM
    8541 2nz5:B (2.35) BS03 226 1.14.19.69 GO:0004497 ... Q9KZF5 17614370 MOAD: Kd=10.5uM
    8542 2o0u:A (2.1) BS01 C0M 2.7.11.24 GO:0004672 ... P53779 17194588 MOAD: ic50=3.2uM
    PDBbind: -logKd/Ki=5.49, Ki=3.2uM
    BindingDB: IC50=3162.28nM
    8543 2o1c:A (1.8) BS01 PPV 3.6.1.67 GO:0000287 ... P0AFC0 17698004 MOAD: Ki=19uM
    8544 2o1c:B (1.8) BS01 PPV 3.6.1.67 GO:0000287 ... P0AFC0 17698004 MOAD: Ki=19uM
    8545 2o1c:C (1.8) BS01 PPV 3.6.1.67 GO:0000287 ... P0AFC0 17698004 MOAD: Ki=19uM
    8546 2o1o:A (2.42) BS03 RIS ? GO:0004161 ... Q5CR09 19101474 MOAD: Ki=0.38nM
    BindingDB: IC50=45.7nM, Ki=0.38nM
    8547 2o1o:B (2.42) BS03 RIS ? GO:0004161 ... Q5CR09 19101474 MOAD: Ki=0.38nM
    BindingDB: IC50=45.7nM, Ki=0.38nM
    8548 2o1v:A (2.45) BS01 ADP ? GO:0005524 ... P41148 17936703 MOAD: Kd~5uM
    PDBbind: -logKd/Ki=5.30, Kd=5uM
    BindingDB: IC50=11447nM, EC50=21000nM
    8549 2o1v:B (2.45) BS02 ADP ? GO:0005524 ... P41148 17936703 MOAD: Kd~5uM
    BindingDB: IC50=11447nM, EC50=21000nM
    8550 2o22:A (-1.00) BS01 LIU ? GO:0042981 ... P10415 17256834 PDBbind: -logKd/Ki=7.17, Ki=67nM
    8551 2o2s:A (2.6) BS02 TCL 1.3.1.9 GO:0004318 ... Q6UCJ9 17327670 BindingDB: IC50=15nM
    8552 2o2s:B (2.6) BS02 TCL 1.3.1.9 GO:0004318 ... Q6UCJ9 17327670 BindingDB: IC50=15nM
    8553 2o2u:A (2.45) BS01 738 2.7.11.24 GO:0004672 ... P53779 17194588 MOAD: ic50=0.4uM
    PDBbind: -logKd/Ki=6.40, Ki=0.4uM
    BindingDB: IC50=398.11nM
    8554 2o2y:A (2.2) BS02 TCL 1.3.1.9 GO:0004318 ... Q9BH77 17327670 MOAD: Ki=0.4nM
    BindingDB: IC50=49nM
    8555 2o2y:B (2.2) BS02 TCL 1.3.1.9 GO:0004318 ... Q9BH77 17327670 MOAD: Ki=0.4nM
    BindingDB: IC50=49nM
    8556 2o2y:C (2.2) BS02 TCL 1.3.1.9 GO:0004318 ... Q9BH77 17327670 MOAD: Ki=0.4nM
    BindingDB: IC50=49nM
    8557 2o2y:D (2.2) BS02 TCL 1.3.1.9 GO:0004318 ... Q9BH77 17327670 MOAD: Ki=0.4nM
    BindingDB: IC50=49nM
    8558 2o3p:A (2.24) BS01 QUE 2.7.11.1 GO:0004672 ... P11309 17218638 MOAD: ic50=1.1uM
    PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    BindingDB: IC50=1100nM, Kd=25nM
    8559 2o3z:A (2.25) BS03 AI7 3.5.1.108 GO:0006796 ... O67648 17296300 MOAD: Kd=2uM
    PDBbind: -logKd/Ki=5.70, Kd=2uM
    8560 2o3z:B (2.25) BS01 AI7 3.5.1.108 GO:0006796 ... O67648 17296300 MOAD: Kd=2uM
    PDBbind: -logKd/Ki=5.70, Kd=2uM
    8561 2o3z:B (2.25) BS05 AI7 3.5.1.108 GO:0006796 ... O67648 17296300 MOAD: Kd=2uM
    PDBbind: -logKd/Ki=5.70, Kd=2uM
    8562 2o4h:A (2.7) BS02 AS9 3.5.1.15 GO:0005515 ... P45381 18293939 PDBbind: -logKd/Ki=6.52, Ki=300nM
    8563 2o4j:A (1.74) BS02 VD4 ? GO:0003677 ... P13053 17227670 MOAD: Ki=0.08nM
    PDBbind: -logKd/Ki=10.10, Ki=0.08nM
    8564 2o4k:A (1.6) BS01 DR7 ? GO:0004190 ... Q903J0 17360759 MOAD: Kd=35pM
    PDBbind: -logKd/Ki=10.46, Kd=35pM
    8565 2o4k:B (1.6) BS01 DR7 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17360759 PDBbind: -logKd/Ki=10.46, Kd=35pM
    8566 2o4l:A (1.33) BS01 TPV ? GO:0004190 ... Q1G1C3 17360759 MOAD: Kd=608pM
    PDBbind: -logKd/Ki=9.22, Kd=608pM
    8567 2o4l:B (1.33) BS01 TPV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17360759 PDBbind: -logKd/Ki=9.22, Kd=608pM
    8568 2o4n:A (2.0) BS01 TPV 3.1.26.13 GO:0004190 ... Q90SN9 17360759 MOAD: Kd=15010pM
    PDBbind: -logKd/Ki=7.82, Kd=15nM
    8569 2o4n:B (2.0) BS01 TPV 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17360759 PDBbind: -logKd/Ki=7.82, Kd=15nM
    8570 2o4p:A (1.8) BS01 TPV ? GO:0004190 ... Q5RZ08 17360759 MOAD: Kd=19pM
    PDBbind: -logKd/Ki=10.72, Kd=19pM
    8571 2o4p:B (1.8) BS01 TPV ? GO:0004190 ... Q5RZ08 17360759 PDBbind: -logKd/Ki=10.72, Kd=19pM
    8572 2o4r:A (1.98) BS02 VD5 ? GO:0003677 ... P13053 17227670 MOAD: Ki=0.4nM
    PDBbind: -logKd/Ki=9.40, Ki=0.4nM
    8573 2o4s:A (1.54) BS01 AB1 ? GO:0004190 ... Q5RZ08 17360759 MOAD: Kd=31pM
    PDBbind: -logKd/Ki=10.51, Kd=31pM
    8574 2o4s:B (1.54) BS01 AB1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 17360759 PDBbind: -logKd/Ki=10.51, Kd=31pM
    8575 2o4z:A (2.1) BS02 HSW 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 17346964 MOAD: Ki=566nM
    PDBbind: -logKd/Ki=6.25, Ki=566nM
    BindingDB: Ki=566nM
    8576 2o5d:A (2.2) BS01 VR1 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 17276060 MOAD: ic50=7uM
    PDBbind: -logKd/Ki=5.15, IC50=7uM
    8577 2o5d:B (2.2) BS01 VR1 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 17276060 MOAD: ic50=7uM
    8578 2o5k:A (3.2) BS01 HBM 2.7.11.1
    2.7.11.26    		 GO:0004672 ... P49841 17764934 PDBbind: -logKd/Ki=7.82, IC50=15nM
    BindingDB: IC50=15nM
    8579 2o5z:H (2.4) BS01 ANO N/A N/A N/A 18689687 MOAD: Kd=110mM
    8580 2o63:A (2.0) BS01 MYC 2.7.11.1 GO:0004672 ... P11309 17218638 MOAD: ic50=0.78uM
    PDBbind: -logKd/Ki=6.11, IC50=0.78uM
    BindingDB: IC50=780nM
    8581 2o64:A (2.44) BS01 MYU 2.7.11.1 GO:0004672 ... P11309 17218638 MOAD: ic50=0.34uM
    PDBbind: -logKd/Ki=6.47, IC50=0.34uM
    BindingDB: IC50=340nM
    8582 2o65:A (2.85) BS01 MYF 2.7.11.1 GO:0004672 ... P11309 17218638 PDBbind: -logKd/Ki=6.19, IC50=0.65uM
    BindingDB: IC50=650nM
    8583 2o6m:A (2.3) BS01 dna 3.1.-.- GO:0004519 ... Q94702 17516660 PDBbind: Kd=13nM
    8584 2o6m:A (2.3) BS02 dna 3.1.-.- GO:0004519 ... Q94702 17516660 PDBbind: Kd=13nM
    8585 2o6m:B (2.3) BS01 dna 3.1.-.- GO:0004519 ... Q94702 17516660 PDBbind: Kd=13nM
    8586 2o6m:B (2.3) BS02 dna 3.1.-.- GO:0004519 ... Q94702 17516660 PDBbind: Kd=13nM
    8587 2o7e:A (1.75) BS01 PMI 4.3.1.23 GO:0003824 ... Q3IWB0 17185228 PDBbind: -logKd/Ki=6.22, Ki=0.6uM
    8588 2o7e:A (1.75) BS02 PMI 4.3.1.23 GO:0003824 ... Q3IWB0 17185228 PDBbind: -logKd/Ki=6.22, Ki=0.6uM
    8589 2o7e:B (1.75) BS01 PMI 4.3.1.23 GO:0003824 ... Q3IWB0 17185228 PDBbind: -logKd/Ki=6.22, Ki=0.6uM
    8590 2o7e:B (1.75) BS02 PMI 4.3.1.23 GO:0003824 ... Q3IWB0 17185228 PDBbind: -logKd/Ki=6.22, Ki=0.6uM
    8591 2o7e:D (1.75) BS01 PMI 4.3.1.23 GO:0003824 ... Q3IWB0 17185228 PDBbind: -logKd/Ki=6.22, Ki=0.6uM
    8592 2o7e:D (1.75) BS02 PMI 4.3.1.23 GO:0003824 ... Q3IWB0 17185228 PDBbind: -logKd/Ki=6.22, Ki=0.6uM
    8593 2o7n:A (1.75) BS01 2O7 ? N/A P20701 17291752 MOAD: ic50=15nM
    PDBbind: -logKd/Ki=7.82, IC50=15nM
    8594 2o8h:A (1.8) BS02 227 3.1.4.17 GO:0004114 ... Q9QYJ6 17228859 MOAD: Ki=25nM
    PDBbind: -logKd/Ki=7.60, Ki=25nM
    BindingDB: Ki=25nM
    8595 2o8k:A (-1.00) BS01 dna ? GO:0001216 ... O66858 17481658 PDBbind: Kd=114nM
    8596 2o8k:A (-1.00) BS02 dna ? GO:0001216 ... O66858 17481658 PDBbind: Kd=114nM
    8597 2o8w:A (1.86) BS01 PL0 3.4.21.73 GO:0004252 ... P00749 N/A BindingDB: IC50=20000nM, Ki=20600nM
    8598 2o99:A (1.7) BS01 GOA ? N/A P16528 17426033 Manual survey: Kd=0.9+-2uM (17426033)
    8599 2o99:B (1.7) BS01 GOA ? N/A P16528 17426033 Manual survey: Kd=0.9+-2uM (17426033)
    8600 2o99:C (1.7) BS01 GOA ? N/A P16528 17426033 Manual survey: Kd=0.9+-2uM (17426033)
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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