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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    3801 1qk4:B (1.9) BS01 IMP 2.4.2.22
    2.4.2.8    		 GO:0000166 ... Q26997 10545170 MOAD: Kd=61uM
    3802 1qk4:C (1.9) BS01 IMP 2.4.2.22
    2.4.2.8    		 GO:0000166 ... Q26997 10545170 MOAD: Kd=61uM
    3803 1qk4:D (1.9) BS01 IMP 2.4.2.22
    2.4.2.8    		 GO:0000166 ... Q26997 10545170 MOAD: Kd=61uM
    3804 1qkm:A (1.8) BS01 GEN ? GO:0003677 ... Q92731 10469641 BindingDB: IC50=10nM, EC50=28nM, Ki=24nM
    3805 1qkn:A (2.25) BS01 RAL ? N/A Q62986 10469641 PDBbind: -logKd/Ki=8.47, IC50=3.4nM
    3806 1qkt:A (2.2) BS01 EST ? N/A P03372 11278577 MOAD: Kd=0.92nM
    PDBbind: -logKd/Ki=9.04, Kd=0.92nM
    BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    3807 1qku:A (3.2) BS01 EST ? N/A P03372 11278577 PDBbind: -logKd/Ki=9.59, Kd=0.26nM
    BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    3808 1qku:B (3.2) BS01 EST ? N/A P03372 11278577 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    3809 1qku:C (3.2) BS01 EST ? N/A P03372 11278577 BindingDB: IC50=1.3nM, Kd=0.2nM, EC50=0.75nM, Ki=0.21nM
    3810 1ql7:A (2.1) BS02 ZEN 3.4.21.4 GO:0004175 ... P00760 11921406 MOAD: Kd=15uM
    PDBbind: -logKd/Ki=5.00, Kd=10uM
    3811 1ql9:A (2.3) BS02 ZEN 3.4.21.4 GO:0004252 ... P00763 12527302 MOAD: Ki=4.45uM
    PDBbind: -logKd/Ki=5.35, Ki=4.45uM
    3812 1qlt:A (2.2) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10585424 MOAD: Kd=4.6mM
    3813 1qlt:B (2.2) BS01 FAD 1.1.3.38 GO:0003824 ... P56216 10585424 MOAD: Kd=4.6mM
    3814 1qlu:A (2.4) BS02 EUG 1.1.3.38 GO:0003824 ... P56216 10585424 MOAD: Kd=22uM
    3815 1qlu:B (2.4) BS02 EUG 1.1.3.38 GO:0003824 ... P56216 10585424 MOAD: Kd=22uM
    3816 1qm5:A (2.0) BS01 GLC 2.4.1.1 GO:0004645 ... P00490 10469642 PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    3817 1qm5:A (2.0) BS02 GLC 2.4.1.1 GO:0004645 ... P00490 10469642 PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    3818 1qm5:A (2.0) BS03 GLC 2.4.1.1 GO:0004645 ... P00490 10469642 PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    3819 1qm5:A (2.0) BS04 SGC 2.4.1.1 GO:0004645 ... P00490 10469642 PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    3820 1qm5:A (2.0) BS06 GLC 2.4.1.1 GO:0004645 ... P00490 10469642 PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    3821 1qp0:A (2.9) BS01 dna ? GO:0000976 ... P0ACP7 10438625 PDBbind: Kd=35nM
    3822 1qp4:A (3.0) BS01 dna ? GO:0000976 ... P0ACP7 10438625 PDBbind: Kd=10nM
    3823 1qp7:A (2.9) BS01 dna ? GO:0000976 ... P0ACP7 10438625 PDBbind: Kd=780nM
    3824 1qp9:A (2.8) BS01 dna ? GO:0000981 ... P0CS82 11024163 PDBbind: Kd=37.8nM
    3825 1qp9:A (2.8) BS02 dna ? GO:0000981 ... P0CS82 11024163 PDBbind: Kd=37.8nM
    3826 1qp9:B (2.8) BS01 dna ? GO:0000981 ... P0CS82 11024163 PDBbind: Kd=37.8nM
    3827 1qp9:B (2.8) BS02 dna ? GO:0000981 ... P0CS82 11024163 PDBbind: Kd=37.8nM
    3828 1qp9:C (2.8) BS01 dna ? GO:0000981 ... P0CS82 11024163 PDBbind: Kd=37.8nM
    3829 1qp9:C (2.8) BS02 dna ? GO:0000981 ... P0CS82 11024163 PDBbind: Kd=37.8nM
    3830 1qp9:D (2.8) BS01 dna ? GO:0000981 ... P0CS82 11024163 PDBbind: Kd=37.8nM
    3831 1qp9:D (2.8) BS02 dna ? GO:0000981 ... P0CS82 11024163 PDBbind: Kd=37.8nM
    3832 1qpb:A (2.4) BS03 PYM 4.1.1.-
    4.1.1.43
    4.1.1.72
    4.1.1.74    		 GO:0000287 ... P06169 10651824 MOAD: Kd=44mM
    PDBbind: -logKd/Ki=1.36, Kd=44mM
    3833 1qpb:B (2.4) BS04 PYM 4.1.1.-
    4.1.1.43
    4.1.1.72
    4.1.1.74    		 GO:0000287 ... P06169 10651824 MOAD: Kd=44mM
    PDBbind: -logKd/Ki=1.36, Kd=44mM
    3834 1qpe:A (2.0) BS01 PP2 2.7.10.2 GO:0004672 ... P06239 10404594 MOAD: ic50=20nM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    3835 1qpf:A (2.5) BS01 858 5.2.1.8 GO:0000413 ... P62942 10425089 MOAD: ic50=27nM
    3836 1qpf:D (2.5) BS01 858 5.2.1.8 GO:0000413 ... P62942 10425089 MOAD: ic50=27nM
    PDBbind: -logKd/Ki=7.57, IC50=27nM
    3837 1qpl:A (2.9) BS01 587 5.2.1.8 GO:0000413 ... P62942 10425089 PDBbind: -logKd/Ki=8.51, IC50=3.1nM
    3838 1qpl:C (2.9) BS01 587 5.2.1.8 GO:0000413 ... P62942 10425089 PDBbind: -logKd/Ki=8.51, IC50=3.1nM
    3839 1qpz:A (2.5) BS01 dna ? GO:0000976 ... P0ACP7 10438625 PDBbind: Kd=2.6nM
    3840 1qq9:A (1.53) BS04 MET 3.4.11.24 GO:0004177 ... P80561 10771423 MOAD: Ki=8.7mM
    PDBbind: -logKd/Ki=2.06, Ki=8.7mM
    3841 1qqa:A (3.0) BS01 dna ? GO:0000976 ... P0ACP7 10438625 PDBbind: Kd=400nM
    3842 1qqb:A (2.7) BS01 dna ? GO:0000976 ... P0ACP7 10438625 PDBbind: Kd=2000nM
    3843 1qre:A (1.46) BS01 BCT 4.2.1.1 N/A P40881 10924115 BindingDB: Ki=42000000nM
    3844 1qrl:A (1.85) BS02 BCT 4.2.1.1 N/A P40881 10924115 BindingDB: Ki=42000000nM
    3845 1qs4:A (2.1) BS02 100 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P12497 10557269 MOAD: ic50=2.3uM
    PDBbind: -logKd/Ki=5.64, IC50=2.3uM
    3846 1qsg:A (1.75) BS03 TCL 1.3.1.9 GO:0004318 ... P0AEK4 10398587 BindingDB: IC50=430nM
    3847 1qsg:B (1.75) BS03 TCL 1.3.1.9 GO:0004318 ... P0AEK4 10398587 BindingDB: IC50=430nM
    3848 1qsg:C (1.75) BS03 TCL 1.3.1.9 GO:0004318 ... P0AEK4 10398587 BindingDB: IC50=430nM
    3849 1qsg:D (1.75) BS02 TCL 1.3.1.9 GO:0004318 ... P0AEK4 10398587 BindingDB: IC50=430nM
    3850 1qsg:E (1.75) BS03 TCL 1.3.1.9 GO:0004318 ... P0AEK4 10398587 BindingDB: IC50=430nM
    3851 1qsg:F (1.75) BS03 TCL 1.3.1.9 GO:0004318 ... P0AEK4 10398587 BindingDB: IC50=430nM
    3852 1qsg:G (1.75) BS03 TCL 1.3.1.9 GO:0004318 ... P0AEK4 10398587 BindingDB: IC50=430nM
    3853 1qsg:H (1.75) BS03 TCL 1.3.1.9 GO:0004318 ... P0AEK4 10398587 BindingDB: IC50=430nM
    3854 1qti:A (2.5) BS01 GNT 3.1.1.7 GO:0001507 ... P04058 11119642 PDBbind: -logKd/Ki=6.44, IC50=0.36uM
    BindingDB: IC50=1069nM, Ki=1.9e+2nM
    3855 1qtq:A (2.25) BS01 rna 6.1.1.18 GO:0000166 ... P00962 9562563 PDBbind: Ki=1.32uM
    3856 1qu2:A (2.2) BS03 MRC 6.1.1.5 GO:0000049 ... P41972 10446055 BindingDB: IC50=20000nM
    3857 1qu3:A (2.9) BS02 MRC 6.1.1.5 GO:0000049 ... P41972 10446055 BindingDB: IC50=20000nM
    3858 1qvt:A (2.89) BS01 PRL ? GO:0003677 ... P0A0N4 15257299 PDBbind: -logKd/Ki=4.38, Kd=42uM
    3859 1qvu:A (2.96) BS02 PRL ? GO:0003677 ... P0A0N4 15257299 PDBbind: -logKd/Ki=4.46, Kd=35uM
    3860 1qwu:A (2.03) BS02 GUL 3.2.1.114 GO:0000139 ... Q24451 12960159 PDBbind: -logKd/Ki=3.22, Ki=0.6mM
    3861 1qx1:A (1.3) BS02 FMF 3.2.1.114 GO:0000139 ... Q24451 12960159 PDBbind: -logKd/Ki=2.12, Ki=7.5mM
    3862 1qxk:A (2.3) BS01 429 3.1.3.48 GO:0004725 ... P18031 14592481 MOAD: Ki=9uM
    PDBbind: -logKd/Ki=5.05, Ki=9.0uM
    BindingDB: Ki=9000nM, IC50=9000nM
    3863 1qxl:A (2.25) BS02 FR8 3.5.4.4 GO:0004000 ... P56658 15239652 MOAD: Ki=11nM
    PDBbind: -logKd/Ki=7.96, Ki=11nM
    3864 1qxo:A (2.0) BS01 FMN 4.2.3.5 GO:0004107 ... P0A2Y6 14656434 MOAD: Kd=20nM
    BindingDB: Kd=>20000nM
    3865 1qxo:B (2.0) BS01 FMN 4.2.3.5 GO:0004107 ... P0A2Y6 14656434 MOAD: Kd=20nM
    BindingDB: Kd=>20000nM
    3866 1qxo:C (2.0) BS01 FMN 4.2.3.5 GO:0004107 ... P0A2Y6 14656434 MOAD: Kd=20nM
    BindingDB: Kd=>20000nM
    3867 1qxo:C (2.0) BS02 FMN 4.2.3.5 GO:0004107 ... P0A2Y6 14656434 MOAD: Kd=20nM
    BindingDB: Kd=>20000nM
    3868 1qxo:D (2.0) BS01 FMN 4.2.3.5 GO:0004107 ... P0A2Y6 14656434 MOAD: Kd=20nM
    BindingDB: Kd=>20000nM
    3869 1qxo:D (2.0) BS02 FMN 4.2.3.5 GO:0004107 ... P0A2Y6 14656434 MOAD: Kd=20nM
    BindingDB: Kd=>20000nM
    3870 1qxw:A (1.67) BS03 M1C 3.4.11.18 GO:0004177 ... P0A078 14998322 MOAD: ic50=7uM
    PDBbind: -logKd/Ki=5.15, IC50=7uM
    3871 1qxy:A (1.04) BS04 M2C 3.4.11.18 GO:0004177 ... P0A078 14998322 MOAD: ic50=16uM
    PDBbind: -logKd/Ki=4.80, IC50=16uM
    3872 1qxz:A (1.68) BS04 M3C 3.4.11.18 GO:0004177 ... P0A078 14998322 MOAD: ic50=19uM
    PDBbind: -logKd/Ki=4.72, IC50=19uM
    3873 1qy1:A (1.7) BS01 PRZ ? GO:0036094 ... P11588 14871097 MOAD: Kd=0.3uM
    PDBbind: -logKd/Ki=6.52, Kd=0.3uM
    3874 1qy2:A (1.75) BS01 IPZ ? GO:0036094 ... P11589 14871097 MOAD: Kd=1.8uM
    PDBbind: -logKd/Ki=5.74, Kd=1.8uM
    3875 1qyg:H (1.81) BS01 BCG N/A N/A N/A 15885702 PDBbind: -logKd/Ki=6.85, Kd=0.14uM
    3876 1qyg:L (1.81) BS01 BCG N/A N/A N/A 15885702 PDBbind: -logKd/Ki=6.85, Kd=0.14uM
    3877 1qzg:A (1.9) BS01 dna ? GO:0000723 ... O13988 14614509 PDBbind: Kd=480nM
    3878 1qzg:B (1.9) BS01 dna ? GO:0000723 ... O13988 14614509 PDBbind: Kd=480nM
    3879 1qzy:A (1.6) BS03 TDE 3.4.11.18 GO:0003723 ... P50579 14534293 MOAD: ic50~800nM
    3880 1r0e:A (2.25) BS01 DFN 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 N/A BindingDB: Kd=0.053000nM
    3881 1r0e:B (2.25) BS01 DFN 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 N/A BindingDB: Kd=0.053000nM
    3882 1r0p:A (1.8) BS01 KSA 2.7.10.1 GO:0004672 ... P08581 14559966 MOAD: Kd=10nM
    PDBbind: -logKd/Ki=8.00, Kd=10nM
    3883 1r0x:A (2.2) BS02 ATP 5.6.1.6 GO:0005524 ... P26361 14685259 MOAD: Kd=149uM
    PDBbind: -logKd/Ki=3.83, Kd=149uM
    3884 1r0x:B (2.2) BS02 ATP 5.6.1.6 GO:0005524 ... P26361 14685259 MOAD: Kd=149uM
    3885 1r0x:C (2.2) BS02 ATP 5.6.1.6 GO:0005524 ... P26361 14685259 MOAD: Kd=149uM
    3886 1r0x:D (2.2) BS02 ATP 5.6.1.6 GO:0005524 ... P26361 14685259 MOAD: Kd=149uM
    3887 1r10:A (3.0) BS02 ATP 5.6.1.6 GO:0005524 ... P26361 14685259 PDBbind: -logKd/Ki=3.83, Kd=149uM
    3888 1r1h:A (1.95) BS02 BIR 3.4.24.11 GO:0001786 ... P08473 14747736 MOAD: Ki=1.2nM
    PDBbind: -logKd/Ki=8.92, Ki=1.2nM
    3889 1r1i:A (2.6) BS02 TI1 3.4.24.11 GO:0001786 ... P08473 14747736 PDBbind: -logKd/Ki=8.54, Ki=2.9nM
    3890 1r1j:A (2.35) BS02 OIR 3.4.24.11 GO:0001786 ... P08473 14747736 MOAD: Ki=2.3nM
    PDBbind: -logKd/Ki=8.64, Ki=2.3nM
    3891 1r33:A (1.8) BS02 LKA 3.2.1.114 GO:0000139 ... Q24451 N/A MOAD: ic50=0.07mM
    3892 1r34:A (1.95) BS02 LKS 3.2.1.114 GO:0000139 ... Q24451 N/A MOAD: ic50=0.9mM
    3893 1r35:A (2.3) BS03 I58 1.14.13.39 GO:0004517 ... P29477 14599013 MOAD: ic50=6.09uM
    3894 1r35:B (2.3) BS03 I58 1.14.13.39 GO:0004517 ... P29477 14599013 MOAD: ic50=6.09uM
    3895 1r37:A (2.3) BS03 NAD 1.1.1.1 GO:0004022 ... P39462 14661950 MOAD: Kd=0.66uM
    3896 1r37:B (2.3) BS03 NAD 1.1.1.1 GO:0004022 ... P39462 14661950 MOAD: Kd=0.66uM
    3897 1r4l:A (3.0) BS02 XX5 3.4.17.-
    3.4.17.23    		 GO:0006508 ... Q9BYF1 14754895 BindingDB: IC50=0.44nM
    3898 1r4w:A (2.5) BS01 GSH 2.5.1.18 GO:0004364 ... P24473 14717589 MOAD: Kd=90uM
    PDBbind: -logKd/Ki=4.05, Kd=90uM
    3899 1r4w:B (2.5) BS01 GSH 2.5.1.18 GO:0004364 ... P24473 14717589 MOAD: Kd=90uM
    PDBbind: -logKd/Ki=4.05, Kd=90uM
    3900 1r4w:C (2.5) BS01 GSH 2.5.1.18 GO:0004364 ... P24473 14717589 MOAD: Kd=90uM
    3901 1r4w:C (2.5) BS02 GSH 2.5.1.18 GO:0004364 ... P24473 14717589 MOAD: Kd=90uM
    3902 1r4w:D (2.5) BS01 GSH 2.5.1.18 GO:0004364 ... P24473 14717589 MOAD: Kd=90uM
    3903 1r4w:D (2.5) BS02 GSH 2.5.1.18 GO:0004364 ... P24473 14717589 MOAD: Kd=90uM
    3904 1r58:A (1.9) BS03 AO5 3.4.11.18 GO:0006508 ... P50579 15012983 PDBbind: -logKd/Ki=6.96, IC50=0.11uM
    BindingDB: IC50=110nM
    3905 1r5g:A (2.0) BS03 AO1 3.4.11.18 GO:0006508 ... P50579 15012983 PDBbind: -logKd/Ki=7.52, IC50=0.03uM
    BindingDB: IC50=22nM
    3906 1r5h:A (2.4) BS03 AO2 3.4.11.18 GO:0006508 ... P50579 15012983 MOAD: ic50=0.17uM
    PDBbind: -logKd/Ki=6.74, IC50=0.18uM
    BindingDB: IC50=170nM
    3907 1r5k:A (2.7) BS01 GW5 ? N/A P03372 15893725 BindingDB: EC50=390nM, IC50=>1270nM
    3908 1r5k:B (2.7) BS01 GW5 ? N/A P03372 15893725 BindingDB: EC50=390nM, IC50=>1270nM
    3909 1r5k:C (2.7) BS01 GW5 ? N/A P03372 15893725 BindingDB: EC50=390nM, IC50=>1270nM
    3910 1r5l:A (1.5) BS01 VIV ? GO:0001890 ... P49638 14657365 BindingDB: Kd=2.4nM
    3911 1r5n:A (2.9) BS01 GDP 3.6.5.- GO:0000288 ... O74718 15099522 PDBbind: -logKd/Ki=5.42, Kd=3.8uM
    3912 1r5y:A (1.2) BS02 DQU 2.4.2.29 GO:0002099 ... P28720 15050823 MOAD: Ki=0.35uM
    PDBbind: -logKd/Ki=6.46, Ki=0.35uM
    3913 1r6g:A (3.0) BS01 442 ? GO:0003677 ... P10828 15177471 PDBbind: -logKd/Ki=9.21, IC50=0.62nM
    3914 1r6n:A (2.4) BS01 434 ? GO:0006275 ... P04015 14634007 MOAD: Kd=40nM
    PDBbind: -logKd/Ki=7.40, Kd=40nM
    3915 1r6n:A (2.4) BS02 434 ? GO:0006275 ... P04015 14634007 MOAD: Kd=40nM
    PDBbind: -logKd/Ki=7.40, Kd=40nM
    3916 1r78:A (2.0) BS01 FMD 2.7.11.22 GO:0000082 ... P24941 15012993 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    3917 1r8d:A (2.7) BS01 dna ? GO:0003677 ... P71039 14985361 PDBbind: Kd=96nM
    3918 1r8d:A (2.7) BS02 dna ? GO:0003677 ... P71039 14985361 PDBbind: Kd=96nM
    3919 1r8d:B (2.7) BS01 dna ? GO:0003677 ... P71039 14985361 PDBbind: Kd=96nM
    3920 1r8d:B (2.7) BS02 dna ? GO:0003677 ... P71039 14985361 PDBbind: Kd=96nM
    3921 1r8e:A (2.4) BS01 dna ? GO:0003677 ... P39075 14985361 PDBbind: Kd=2.4nM
    3922 1ra1:A (1.9) BS02 NAP 1.5.1.3 GO:0004146 ... P0ABQ4 9012674 MOAD: Kd=24uM
    3923 1ra3:A (1.8) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 9012674 BindingDB: IC50=8.8nM, EC50=1nM
    3924 1ra9:A (1.55) BS01 NAP 1.5.1.3 GO:0004146 ... P0ABQ4 9012674 MOAD: Kd=24uM
    3925 1ray:A (1.8) BS02 AZI 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 8482389 BindingDB: Ki=1500000nM
    3926 1rb3:A (2.3) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 9012674 BindingDB: IC50=8.8nM, EC50=1nM
    3927 1rb3:B (2.3) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 9012674 BindingDB: IC50=8.8nM, EC50=1nM
    3928 1rbm:A (2.3) BS01 KT5 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A MOAD: Ki=4nM
    3929 1rbm:B (2.3) BS01 KT5 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A MOAD: Ki=4nM
    3930 1rbo:B (2.3) BS01 CAP 4.1.1.39 GO:0000287 ... P00875 8955130 MOAD: Kd=0.19pM
    3931 1rbo:E (2.3) BS01 CAP 4.1.1.39 GO:0000287 ... P00875 8955130 MOAD: Kd=0.19pM
    3932 1rbo:H (2.3) BS01 CAP 4.1.1.39 GO:0000287 ... P00875 8955130 MOAD: Kd=0.19pM
    3933 1rbo:L (2.3) BS01 CAP 4.1.1.39 GO:0000287 ... P00875 8955130 MOAD: Kd=0.19pM
    PDBbind: -logKd/Ki=12.72, Kd=0.19pM
    3934 1rbp:A (2.0) BS01 RTL ? GO:0001654 ... P02753 2217163 MOAD: Kd=0.19uM
    PDBbind: -logKd/Ki=6.72, Kd=0.19uM
    3935 1rbz:A (2.1) BS01 KT5 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A MOAD: Ki=4nM
    3936 1rbz:B (2.1) BS01 KT5 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A MOAD: Ki=4nM
    3937 1rc0:A (2.05) BS01 KT5 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A MOAD: Ki=4nM
    3938 1rc0:B (2.05) BS01 KT5 2.1.2.2
    6.3.3.1
    6.3.4.13    		 GO:0004644 ... P22102 N/A MOAD: Ki=4nM
    3939 1rcv:D (1.6) BS01 BV1 ? GO:0005515 ... P01556 15380181 MOAD: ic50=29uM
    3940 1rcv:E (1.6) BS01 BV1 ? GO:0005515 ... P01556 15380181 MOAD: ic50=29uM
    3941 1rcv:F (1.6) BS01 BV1 ? GO:0005515 ... P01556 15380181 MOAD: ic50=29uM
    3942 1rcv:F (1.6) BS02 BV1 ? GO:0005515 ... P01556 15380181 MOAD: ic50=29uM
    3943 1rcv:G (1.6) BS01 BV1 ? GO:0005515 ... P01556 15380181 MOAD: ic50=29uM
    3944 1rcv:H (1.6) BS01 BV1 ? GO:0005515 ... P01556 15380181 MOAD: ic50=29uM
    3945 1rd4:A (2.4) BS01 L08 ? N/A P20701 14992576 MOAD: Kd=18.3nM
    PDBbind: -logKd/Ki=7.74, Kd=18.3nM
    BindingDB: Kd=18nM
    3946 1rd4:B (2.4) BS01 L08 ? N/A P20701 14992576 MOAD: Kd=18.3nM
    BindingDB: Kd=18nM
    3947 1rd4:C (2.4) BS01 L08 ? N/A P20701 14992576 MOAD: Kd=18.3nM
    BindingDB: Kd=18nM
    3948 1rd4:D (2.4) BS01 L08 ? N/A P20701 14992576 MOAD: Kd=18.3nM
    BindingDB: Kd=18nM
    3949 1rd9:D (1.44) BS01 BV2 ? GO:0005515 ... P01556 15380181 MOAD: ic50=13uM
    3950 1rd9:D (1.44) BS02 BV2 ? GO:0005515 ... P01556 15380181 MOAD: ic50=13uM
    3951 1rd9:E (1.44) BS01 BV2 ? GO:0005515 ... P01556 15380181 MOAD: ic50=13uM
    3952 1rd9:F (1.44) BS01 BV2 ? GO:0005515 ... P01556 15380181 MOAD: ic50=13uM
    3953 1rd9:F (1.44) BS02 BV2 ? GO:0005515 ... P01556 15380181 MOAD: ic50=13uM
    3954 1rd9:G (1.44) BS01 BV2 ? GO:0005515 ... P01556 15380181 MOAD: ic50=13uM
    3955 1rd9:H (1.44) BS01 BV2 ? GO:0005515 ... P01556 15380181 MOAD: ic50=13uM
    3956 1rdi:1 (1.8) BS01 MFU ? N/A P08661 8557671 MOAD: Ki=8.8mM
    PDBbind: -logKd/Ki=2.06, Ki=8.8mM
    3957 1rdi:2 (1.8) BS01 MFU ? N/A P08661 8557671 MOAD: Ki=8.8mM
    3958 1rdj:1 (1.8) BS01 MFB ? N/A P08661 8557671 MOAD: Ki=21.7mM
    PDBbind: -logKd/Ki=1.66, Ki=21.7mM
    3959 1rdj:2 (1.8) BS01 MFB ? N/A P08661 8557671 MOAD: Ki=21.7mM
    3960 1rdk:1 (1.8) BS01 GAL ? N/A P08661 8557671 MOAD: Ki=114mM
    3961 1rdk:2 (1.8) BS01 GAL ? N/A P08661 8557671 MOAD: Ki=114mM
    3962 1rdl:1 (1.7) BS01 MMA ? N/A P08661 8557671 MOAD: Ki=5.7mM
    PDBbind: -logKd/Ki=2.24, Ki=5.7mM
    3963 1rdl:2 (1.7) BS01 MMA ? N/A P08661 8557671 MOAD: Ki=5.7mM
    3964 1rdm:1 (1.9) BS01 MMA ? N/A P08661 8557671 MOAD: Ki=5.7mM
    3965 1rdm:1 (1.9) BS02 MMA ? N/A P08661 8557671 MOAD: Ki=5.7mM
    3966 1rdm:2 (1.9) BS01 MMA ? N/A P08661 8557671 MOAD: Ki=5.7mM
    3967 1rdp:D (1.35) BS01 BV3 ? GO:0005515 ... P01556 15380181 MOAD: ic50=9uM
    3968 1rdp:E (1.35) BS01 BV3 ? GO:0005515 ... P01556 15380181 MOAD: ic50=9uM
    3969 1rdp:F (1.35) BS01 BV3 ? GO:0005515 ... P01556 15380181 MOAD: ic50=9uM
    3970 1rdp:G (1.35) BS01 BV3 ? GO:0005515 ... P01556 15380181 MOAD: ic50=9uM
    3971 1rdp:H (1.35) BS01 BV3 ? GO:0005515 ... P01556 15380181 MOAD: ic50=9uM
    3972 1rdt:A (2.4) BS02 L79 ? GO:0003677 ... P19793 15056000 MOAD: Ki=6nM
    PDBbind: -logKd/Ki=6.70, Ki=200nM
    3973 1rdt:D (2.4) BS02 570 ? GO:0003677 ... P37231 15056000 BindingDB: Ki=1.1nM, EC50=0.338844nM, IC50=25nM
    3974 1rdy:A (2.2) BS02 AMP 3.1.3.11 GO:0005737 ... P00636 8844845 BindingDB: IC50=1300nM
    3975 1rdy:B (2.2) BS02 AMP 3.1.3.11 GO:0005737 ... P00636 8844845 BindingDB: IC50=1300nM
    3976 1rdz:A (2.05) BS02 AMP 3.1.3.11 GO:0005737 ... P00636 8844845 BindingDB: IC50=1300nM
    3977 1rdz:B (2.05) BS02 AMP 3.1.3.11 GO:0005737 ... P00636 8844845 BindingDB: IC50=1300nM
    3978 1re1:A (2.5) BS01 NA3 3.4.22.56 GO:0004197 ... P42574 15115390 PDBbind: -logKd/Ki=5.21, IC50=6117nM
    BindingDB: IC50=6000nM
    3979 1re1:B (2.5) BS01 NA3 3.4.22.56 GO:0004197 ... P42574 15115390 PDBbind: -logKd/Ki=5.21, IC50=6117nM
    BindingDB: IC50=6000nM
    3980 1re8:A (2.1) BS01 BD2 2.7.11.11 GO:0000122 ... P05132 14705934 MOAD: Ki=0.3nM
    PDBbind: -logKd/Ki=9.52, Ki=0.3nM
    3981 1re9:A (1.45) BS02 DSO 1.14.15.1 GO:0004497 ... P00183 15522298 MOAD: Kd~0.02uM
    3982 1rej:A (2.2) BS01 B1L 2.7.11.11 GO:0000122 ... P05132 14705934 MOAD: Ki=5nM
    PDBbind: -logKd/Ki=8.30, Ki=5nM
    3983 1rek:A (2.3) BS01 B8L 2.7.11.11 GO:0000122 ... P05132 14705934 MOAD: Ki=200nM
    PDBbind: -logKd/Ki=6.70, Ki=200nM
    3984 1rev:A (2.6) BS01 TB9 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 8535785 PDBbind: -logKd/Ki=7.48, Ki=33nM
    3985 1rf2:D (1.35) BS01 BV4 ? GO:0005515 ... P01556 15380181 MOAD: ic50=17uM
    3986 1rf2:E (1.35) BS01 BV4 ? GO:0005515 ... P01556 15380181 MOAD: ic50=17uM
    3987 1rf2:F (1.35) BS01 BV4 ? GO:0005515 ... P01556 15380181 MOAD: ic50=17uM
    3988 1rf2:G (1.35) BS01 BV4 ? GO:0005515 ... P01556 15380181 MOAD: ic50=17uM
    3989 1rf2:H (1.35) BS01 BV4 ? GO:0005515 ... P01556 15380181 MOAD: ic50=17uM
    3990 1rff:A (1.7) BS03 VO4 3.1.4.- GO:0005634 ... Q9NUW8 14761185 BindingDB: IC50=4000nM
    3991 1rff:B (1.7) BS03 VO4 3.1.4.- GO:0005634 ... Q9NUW8 14761185 BindingDB: IC50=4000nM
    3992 1rfi:A (2.2) BS03 VO4 3.1.4.- GO:0005634 ... Q9NUW8 14761185 BindingDB: IC50=4000nM
    3993 1rfi:B (2.2) BS03 VO4 3.1.4.- GO:0005634 ... Q9NUW8 14761185 BindingDB: IC50=4000nM
    3994 1rg1:A (2.1) BS02 VO4 3.1.4.- GO:0005634 ... Q9NUW8 14761185 BindingDB: IC50=4000nM
    3995 1rg1:B (2.1) BS02 VO4 3.1.4.- GO:0005634 ... Q9NUW8 14761185 BindingDB: IC50=4000nM
    3996 1rg2:A (2.1) BS02 VO4 3.1.4.- GO:0005634 ... Q9NUW8 14761185 BindingDB: IC50=4000nM
    3997 1rg2:B (2.1) BS02 VO4 3.1.4.- GO:0005634 ... Q9NUW8 14761185 BindingDB: IC50=4000nM
    3998 1rg7:A (2.0) BS01 MTX 1.5.1.3 GO:0004146 ... P0ABQ4 9012674 MOAD: Kd=0.7nM
    BindingDB: IC50=8.8nM, EC50=1nM
    3999 1rgk:A (1.87) BS01 2AM 4.6.1.24 GO:0001411 ... P00651 1350642 MOAD: Kd=49.1uM
    PDBbind: -logKd/Ki=4.31, Kd=49.1uM
    4000 1rgl:A (2.0) BS01 2GP 4.6.1.24 GO:0001411 ... P00651 1350642 MOAD: Kd=37uM
    PDBbind: -logKd/Ki=4.43, Kd=37uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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