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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 48291 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    28001 4r5m:A (1.89) BS02 4NO 1.2.1.11 GO:0004073 ... Q9KQG2 25478842 MOAD: Ki=0.076mM
    28002 4r5m:B (1.89) BS02 4NO 1.2.1.11 GO:0004073 ... Q9KQG2 25478842 MOAD: Ki=0.076mM
    28003 4r5n:A (1.8) BS01 3J9 3.4.23.46 GO:0004190 ... P56817 25411915 MOAD: ic50=76nM
    PDBbind: -logKd/Ki=7.12, IC50=76nM
    BindingDB: IC50=60nM
    28004 4r5t:A (1.98) BS02 R5T 3.4.11.- GO:0006508 ... O96935 25299353 MOAD: Ki=0.8uM
    PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    BindingDB: Ki=0.800000nM
    28005 4r5v:A (2.1) BS02 R5V 3.4.11.- GO:0006508 ... O96935 25299353 MOAD: Ki=0.7uM
    PDBbind: -logKd/Ki=6.15, Ki=0.7uM
    BindingDB: Ki=0.700000nM
    28006 4r5w:A (2.84) BS01 XAV 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 28001384 PDBbind: -logKd/Ki=7.13, IC50=74.1nM
    BindingDB: IC50=120nM, Kd=620nM
    28007 4r5w:B (2.84) BS01 XAV 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 28001384 BindingDB: IC50=120nM, Kd=620nM
    28008 4r5x:A (1.85) BS02 R5X 3.4.11.- GO:0006508 ... O96935 25299353 MOAD: Ki=5.5uM
    PDBbind: -logKd/Ki=5.26, Ki=5.5uM
    BindingDB: Ki=5.5nM
    28009 4r5y:A (3.5) BS01 3K3 2.7.11.1 GO:0004672 ... P15056 26208524 PDBbind: -logKd/Ki=7.64, IC50=23nM
    BindingDB: IC50=23nM
    28010 4r5y:B (3.5) BS01 3K3 2.7.11.1 GO:0004672 ... P15056 26208524 BindingDB: IC50=23nM
    28011 4r68:A (2.112) BS02 W31 1.1.1.27 GO:0003824 ... P00338 25466195 MOAD: ic50=6nM
    28012 4r68:B (2.112) BS02 W31 1.1.1.27 GO:0003824 ... P00338 25466195 MOAD: ic50=6nM
    28013 4r68:C (2.112) BS02 W31 1.1.1.27 GO:0003824 ... P00338 25466195 MOAD: ic50=6nM
    28014 4r68:D (2.112) BS02 W31 1.1.1.27 GO:0003824 ... P00338 25466195 MOAD: ic50=6nM
    28015 4r69:A (3.19) BS02 W13 1.1.1.27 GO:0003824 ... P00338 25466195 BindingDB: IC50=60nM
    28016 4r69:B (3.19) BS02 W13 1.1.1.27 GO:0003824 ... P00338 25466195 BindingDB: IC50=60nM
    28017 4r69:C (3.19) BS02 W13 1.1.1.27 GO:0003824 ... P00338 25466195 BindingDB: IC50=60nM
    28018 4r69:D (3.19) BS02 W13 1.1.1.27 GO:0003824 ... P00338 25466195 BindingDB: IC50=60nM
    28019 4r6a:A (2.1) BS02 HB2 ? GO:0002224 ... Q9NR97 N/A BindingDB: EC50=100nM
    28020 4r6a:A (2.1) BS03 HB2 ? GO:0002224 ... Q9NR97 N/A BindingDB: EC50=100nM
    28021 4r6a:B (2.1) BS01 HB2 ? GO:0002224 ... Q9NR97 N/A BindingDB: EC50=100nM
    28022 4r6a:B (2.1) BS02 HB2 ? GO:0002224 ... Q9NR97 N/A BindingDB: EC50=100nM
    28023 4r6e:A (2.2) BS01 3JD 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 28001384 MOAD: ic50=132nM
    PDBbind: -logKd/Ki=7.78, IC50=16.7nM
    BindingDB: IC50=132nM, Ki=3.2nM, EC50=31000nM
    28024 4r6e:B (2.2) BS01 3JD 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 28001384 MOAD: ic50=132nM
    BindingDB: IC50=132nM, Ki=3.2nM, EC50=31000nM
    28025 4r6e:C (2.2) BS01 3JD 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 28001384 MOAD: ic50=132nM
    BindingDB: IC50=132nM, Ki=3.2nM, EC50=31000nM
    28026 4r6e:D (2.2) BS01 3JD 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P09874 28001384 MOAD: ic50=132nM
    BindingDB: IC50=132nM, Ki=3.2nM, EC50=31000nM
    28027 4r6n:A (1.67) BS04 MBG ? GO:0005575 ... P18670 25664742 MOAD: Ka=150M^-1
    28028 4r6n:E (1.67) BS04 MBG ? GO:0005575 ... P18670 25664742 MOAD: Ka=150M^-1
    28029 4r6n:G (1.67) BS04 MBG ? GO:0005575 ... P18670 25664742 MOAD: Ka=150M^-1
    28030 4r6r:A (1.38) BS04 147 ? GO:0005575 ... P18670 25664742 MOAD: Ka=2370M^-1
    28031 4r6r:E (1.38) BS04 147 ? GO:0005575 ... P18670 25664742 MOAD: Ka=2370M^-1
    28032 4r6r:G (1.38) BS04 147 ? GO:0005575 ... P18670 25664742 MOAD: Ka=2370M^-1
    28033 4r6s:A (2.301) BS01 3K2 ? GO:0003677 ... P37231 26068133 BindingDB: EC50=503nM, IC50=2.0nM
    28034 4r6s:B (2.301) BS01 3K2 ? GO:0003677 ... P37231 26068133 BindingDB: EC50=503nM, IC50=2.0nM
    28035 4r6t:A (2.6) BS04 R5T 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 PDBbind: -logKd/Ki=7.52, Ki=0.03uM
    BindingDB: Ki=0.030000nM
    28036 4r6t:B (2.6) BS04 R5T 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.030000nM
    28037 4r6t:C (2.6) BS04 R5T 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.030000nM
    28038 4r6t:D (2.6) BS04 R5T 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.030000nM
    28039 4r6t:E (2.6) BS04 R5T 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.030000nM
    28040 4r6t:F (2.6) BS04 R5T 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.030000nM
    28041 4r6t:G (2.6) BS04 R5T 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.030000nM
    28042 4r6t:H (2.6) BS04 R5T 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.030000nM
    28043 4r6t:I (2.6) BS04 R5T 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.030000nM
    28044 4r6t:J (2.6) BS04 R5T 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.030000nM
    28045 4r6t:K (2.6) BS04 R5T 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.030000nM
    28046 4r6t:L (2.6) BS04 R5T 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.030000nM
    28047 4r6v:A (2.353) BS01 FI3 2.7.10.1 GO:0004672 ... P22455 25349422 PDBbind: -logKd/Ki=7.45, IC50=35.3nM
    28048 4r6w:A (1.5894) BS02 SAH 2.1.1.103 GO:0000139 ... Q8IDQ9 25288796 MOAD: Kd=5.4uM
    PDBbind: -logKd/Ki=5.27, Kd=5.4uM
    28049 4r6w:B (1.5894) BS02 SAH 2.1.1.103 GO:0000139 ... Q8IDQ9 25288796 MOAD: Kd=5.4uM
    28050 4r6x:A (2.5534) BS02 SAH 2.1.1.103 GO:0000139 ... Q8IDQ9 25288796 PDBbind: -logKd/Ki=5.27, Kd=5.4uM
    28051 4r73:A (1.6) BS01 G6P ? GO:0015888 ... A3N294 26295949 MOAD: Kd=23nM
    PDBbind: -logKd/Ki=7.64, Kd=23nM
    28052 4r73:A (1.6) BS02 M6P ? GO:0015888 ... A3N294 26295949 MOAD: Kd=960nM
    28053 4r73:B (1.6) BS01 G6P ? GO:0015888 ... A3N294 26295949 MOAD: Kd=23nM
    28054 4r73:B (1.6) BS02 M6P ? GO:0015888 ... A3N294 26295949 MOAD: Kd=960nM
    28055 4r74:A (1.93) BS01 F6P ? GO:0015888 ... A3N294 26295949 MOAD: Kd=8nM
    PDBbind: -logKd/Ki=8.10, Kd=8nM
    28056 4r74:B (1.93) BS01 F6P ? GO:0015888 ... A3N294 26295949 MOAD: Kd=8nM
    28057 4r74:C (1.93) BS01 F6P ? GO:0015888 ... A3N294 26295949 MOAD: Kd=8nM
    28058 4r74:D (1.93) BS01 F6P ? GO:0015888 ... A3N294 26295949 MOAD: Kd=8nM
    28059 4r75:A (1.278) BS01 S7P ? GO:0015888 ... A3N294 26295949 MOAD: Kd=57nM
    PDBbind: -logKd/Ki=7.24, Kd=57nM
    28060 4r76:A (2.5) BS04 R5X 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 MOAD: Ki=0.014uM
    PDBbind: -logKd/Ki=7.85, Ki=14nM
    BindingDB: Ki=0.014000nM
    28061 4r76:B (2.5) BS04 R5X 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 MOAD: Ki=0.014uM
    BindingDB: Ki=0.014000nM
    28062 4r76:C (2.5) BS04 R5X 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 MOAD: Ki=0.014uM
    BindingDB: Ki=0.014000nM
    28063 4r76:D (2.5) BS04 R5X 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 MOAD: Ki=0.014uM
    BindingDB: Ki=0.014000nM
    28064 4r76:E (2.5) BS04 R5X 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 MOAD: Ki=0.014uM
    BindingDB: Ki=0.014000nM
    28065 4r76:F (2.5) BS04 R5X 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 MOAD: Ki=0.014uM
    PDBbind: -logKd/Ki=7.85, Ki=14nM
    BindingDB: Ki=0.014000nM
    28066 4r76:G (2.5) BS04 R5X 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 MOAD: Ki=0.014uM
    BindingDB: Ki=0.014000nM
    28067 4r76:H (2.5) BS04 R5X 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 MOAD: Ki=0.014uM
    BindingDB: Ki=0.014000nM
    28068 4r76:I (2.5) BS04 R5X 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 MOAD: Ki=0.014uM
    BindingDB: Ki=0.014000nM
    28069 4r76:J (2.5) BS04 R5X 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 MOAD: Ki=0.014uM
    BindingDB: Ki=0.014000nM
    28070 4r76:K (2.5) BS04 R5X 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 MOAD: Ki=0.014uM
    BindingDB: Ki=0.014000nM
    28071 4r76:L (2.5) BS04 R5X 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 MOAD: Ki=0.014uM
    BindingDB: Ki=0.014000nM
    28072 4r7h:A (2.8001) BS01 P31 2.7.10.1 GO:0004672 ... P07333 26222558 BindingDB: IC50=13nM
    28073 4r7i:A (2.75) BS01 STI 2.7.10.1 GO:0004672 ... P07333 26222558 BindingDB: Kd=19nM, IC50=291nM
    28074 4r7l:A (1.66) BS02 SHH 3.3.2.6
    3.4.11.4    		 GO:0003723 ... P09960 N/A BindingDB: IC50=1670nM
    28075 4r7m:A (2.85) BS04 3MW 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 PDBbind: -logKd/Ki=7.96, Kd=11nM
    BindingDB: Ki=0.011000nM
    28076 4r7m:B (2.85) BS04 3MW 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.011000nM
    28077 4r7m:C (2.85) BS04 3MW 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.011000nM
    28078 4r7m:D (2.85) BS04 3MW 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.011000nM
    28079 4r7m:E (2.85) BS04 3MW 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.011000nM
    28080 4r7m:F (2.85) BS04 3MW 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.011000nM
    28081 4r7m:G (2.85) BS04 3MW 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.011000nM
    28082 4r7m:H (2.85) BS04 3MW 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.011000nM
    28083 4r7m:I (2.85) BS04 3MW 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.011000nM
    28084 4r7m:J (2.85) BS04 3MW 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.011000nM
    28085 4r7m:K (2.85) BS04 3MW 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.011000nM
    28086 4r7m:L (2.85) BS04 3MW 3.4.11.1
    3.4.13.-    		 GO:0005737 ... Q8IL11 25299353 BindingDB: Ki=0.011000nM
    28087 4r8y:A (1.9) BS01 3KO 3.4.23.46 GO:0004190 ... P56817 25455483 MOAD: Ki=0.64uM
    PDBbind: -logKd/Ki=6.19, Ki=0.64uM
    BindingDB: Ki=640nM
    28088 4r8y:B (1.9) BS01 3KO 3.4.23.46 GO:0004190 ... P56817 25455483 MOAD: Ki=0.64uM
    BindingDB: Ki=640nM
    28089 4r91:A (1.58) BS01 3KT 3.4.23.46 GO:0004190 ... P56817 25455483 MOAD: Ki=430nM
    PDBbind: -logKd/Ki=6.37, Kd=430nM
    BindingDB: Ki=430nM
    28090 4r91:B (1.58) BS01 3KT 3.4.23.46 GO:0004190 ... P56817 25455483 MOAD: Ki=430nM
    BindingDB: Ki=430nM
    28091 4r92:A (1.71) BS01 3KU 3.4.23.46 GO:0004190 ... P56817 25455483 MOAD: Ki=39nM
    PDBbind: -logKd/Ki=7.41, Ki=39nM
    BindingDB: Ki=39nM
    28092 4r92:B (1.71) BS01 3KU 3.4.23.46 GO:0004190 ... P56817 25455483 MOAD: Ki=39nM
    BindingDB: Ki=39nM
    28093 4r93:A (1.71) BS01 779 3.4.23.46 GO:0004190 ... P56817 25455483 MOAD: Ki=16nM
    PDBbind: -logKd/Ki=7.80, Ki=16nM
    BindingDB: Ki=16nM
    28094 4r93:B (1.71) BS01 779 3.4.23.46 GO:0004190 ... P56817 25455483 MOAD: Ki=16nM
    BindingDB: Ki=16nM
    28095 4r95:A (1.99) BS01 3KW 3.4.23.46 GO:0004190 ... P56817 25455483 MOAD: Ki=22nM
    PDBbind: -logKd/Ki=7.85, Ki=14nM
    28096 4r95:B (1.99) BS01 3KW 3.4.23.46 GO:0004190 ... P56817 25455483 MOAD: Ki=22nM
    28097 4r9r:A (2.9) BS02 3KX 1.3.1.9 GO:0004318 ... P9WGR1 25568071 BindingDB: Kd=560nM, IC50=590nM
    28098 4r9r:C (2.9) BS02 3KX 1.3.1.9 GO:0004318 ... P9WGR1 25568071 BindingDB: Kd=560nM, IC50=590nM
    28099 4r9r:E (2.9) BS02 3KX 1.3.1.9 GO:0004318 ... P9WGR1 25568071 BindingDB: Kd=560nM, IC50=590nM
    28100 4r9r:G (2.9) BS02 3KX 1.3.1.9 GO:0004318 ... P9WGR1 25568071 BindingDB: Kd=560nM, IC50=590nM
    28101 4r9s:A (3.2) BS02 3KY 1.3.1.9 GO:0004318 ... P9WGR1 25568071 BindingDB: IC50=570nM
    28102 4r9s:C (3.2) BS02 3KY 1.3.1.9 GO:0004318 ... P9WGR1 25568071 BindingDB: IC50=570nM
    28103 4r9s:E (3.2) BS02 3KY 1.3.1.9 GO:0004318 ... P9WGR1 25568071 BindingDB: IC50=570nM
    28104 4r9s:G (3.2) BS02 3KY 1.3.1.9 GO:0004318 ... P9WGR1 25568071 BindingDB: IC50=570nM
    28105 4ra1:A (1.75) BS01 ALX ? GO:0015833 ... Q52012 26244338 MOAD: Kd=0.43uM
    PDBbind: -logKd/Ki=5.94, Kd=1.16uM
    28106 4ra1:A (1.75) BS02 BNX ? GO:0015833 ... Q52012 26244338 MOAD: Kd=0.43uM
    28107 4ra5:A (2.61) BS01 3L0 2.7.11.13 GO:0004672 ... Q04759 25254961 PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: IC50=4.0nM
    28108 4ra5:B (2.61) BS01 3L0 2.7.11.13 GO:0004672 ... Q04759 25254961 BindingDB: IC50=4.0nM
    28109 4rab:A (2.264) BS01 3L3 2.4.2.8 GO:0000166 ... P00492 25494538 MOAD: Ki=0.04uM
    PDBbind: -logKd/Ki=7.40, Ki=0.04uM
    28110 4rab:B (2.264) BS01 3L3 2.4.2.8 GO:0000166 ... P00492 25494538 MOAD: Ki=0.04uM
    28111 4rab:C (2.264) BS01 3L3 2.4.2.8 GO:0000166 ... P00492 25494538 MOAD: Ki=0.04uM
    PDBbind: -logKd/Ki=7.40, Ki=0.04uM
    28112 4rab:D (2.264) BS01 3L3 2.4.2.8 GO:0000166 ... P00492 25494538 MOAD: Ki=0.04uM
    28113 4rac:A (2.05) BS01 3L4 2.4.2.8 GO:0000166 ... P00492 25494538 MOAD: Ki=0.03uM
    PDBbind: -logKd/Ki=7.52, Ki=0.03uM
    28114 4rac:B (2.05) BS01 3L4 2.4.2.8 GO:0000166 ... P00492 25494538 MOAD: Ki=0.03uM
    28115 4rac:C (2.05) BS01 3L4 2.4.2.8 GO:0000166 ... P00492 25494538 MOAD: Ki=0.03uM
    PDBbind: -logKd/Ki=7.52, Ki=0.03uM
    28116 4rac:D (2.05) BS01 3L4 2.4.2.8 GO:0000166 ... P00492 25494538 MOAD: Ki=0.03uM
    28117 4rad:A (2.0) BS01 3L5 2.4.2.8 GO:0000166 ... P00492 25494538 PDBbind: -logKd/Ki=7.10, Ki=0.08uM
    28118 4rad:C (2.0) BS01 3L5 2.4.2.8 GO:0000166 ... P00492 25494538 PDBbind: -logKd/Ki=7.10, Ki=0.08uM
    28119 4rak:A (2.04) BS01 652 ? GO:0003677 ... P55055 25435151 MOAD: Ki=14nM
    PDBbind: -logKd/Ki=7.85, Ki=14nM
    BindingDB: EC50=250nM, Ki=14nM
    28120 4rak:B (2.04) BS01 652 ? GO:0003677 ... P55055 25435151 MOAD: Ki=14nM
    BindingDB: EC50=250nM, Ki=14nM
    28121 4ran:A (2.549) BS01 3L6 2.4.2.8 GO:0000166 ... P00492 25494538 PDBbind: -logKd/Ki=7.15, Ki=0.07uM
    28122 4rao:A (1.871) BS01 3L7 2.4.2.8 GO:0000166 ... P00492 25494538 MOAD: Ki=1uM
    PDBbind: -logKd/Ki=6.00, Ki=1uM
    28123 4rao:B (1.871) BS01 3L7 2.4.2.8 GO:0000166 ... P00492 25494538 MOAD: Ki=1uM
    28124 4rao:C (1.871) BS01 3L7 2.4.2.8 GO:0000166 ... P00492 25494538 MOAD: Ki=1uM
    PDBbind: -logKd/Ki=6.00, Ki=1uM
    28125 4rao:D (1.871) BS01 3L7 2.4.2.8 GO:0000166 ... P00492 25494538 MOAD: Ki=1uM
    28126 4raq:A (2.53) BS01 3L8 2.4.2.8 GO:0000166 ... P00492 25494538 PDBbind: -logKd/Ki=6.72, Ki=0.19uM
    28127 4raq:C (2.53) BS01 3L8 2.4.2.8 GO:0000166 ... P00492 25494538 PDBbind: -logKd/Ki=6.72, Ki=0.19uM
    28128 4rbo:A (3.3) BS01 dna ? GO:0000981 ... Q9H9S0 25825768 PDBbind: Kd=5.9uM
    28129 4rbo:A (3.3) BS02 dna ? GO:0000981 ... Q9H9S0 25825768 PDBbind: Kd=5.9uM
    28130 4rbo:D (3.3) BS01 dna ? GO:0000981 ... Q9H9S0 25825768 PDBbind: Kd=5.9uM
    28131 4rbo:D (3.3) BS02 dna ? GO:0000981 ... Q9H9S0 25825768 PDBbind: Kd=5.9uM
    28132 4rcd:A (1.9) BS01 3LL 3.4.23.46 GO:0004190 ... P56817 25363711 MOAD: ic50=0.7nM
    PDBbind: -logKd/Ki=9.15, IC50=0.7nM
    BindingDB: IC50=0.700000nM
    28133 4rce:A (2.4) BS01 3LN 3.4.23.46 GO:0004190 ... P56817 25389560 MOAD: ic50=2nM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    BindingDB: IC50=25nM
    28134 4rcf:A (1.78) BS01 3LO 3.4.23.46 GO:0004190 ... P56817 25389560 MOAD: ic50=4nM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    BindingDB: IC50=4.1nM
    28135 4rcg:A (2.6) BS01 GDP 4.1.1.32 GO:0004611 ... P9WIH3 25798914 PDBbind: -logKd/Ki=5.03, Kd=9.3uM
    28136 4rcj:A (1.6) BS01 rna ? GO:0003723 ... Q9BYJ9 26318451 PDBbind: Kd=22uM
    28137 4rcm:A (1.8) BS01 rna ? GO:0003723 ... Q06390 26318451 PDBbind: Kd=22uM
    28138 4rcm:B (1.8) BS01 rna ? GO:0003723 ... Q06390 26318451 PDBbind: Kd=22uM
    28139 4rd0:A (1.713) BS01 GDP 3.6.5.3 GO:0000049 ... Q980A5 25690901 MOAD: Kd=0.24uM
    PDBbind: -logKd/Ki=6.62, Kd=0.24uM
    28140 4rd0:A (1.713) BS03 GDP 3.6.5.3 GO:0000049 ... Q980A5 25690901 MOAD: Kd=0.24uM
    PDBbind: -logKd/Ki=6.62, Kd=0.24uM
    28141 4rd3:A (1.69) BS01 GDP 3.6.5.3 GO:0000049 ... Q980A5 25690901 PDBbind: -logKd/Ki=6.47, Kd=0.34uM
    28142 4rd3:A (1.69) BS03 GDP 3.6.5.3 GO:0000049 ... Q980A5 25690901 PDBbind: -logKd/Ki=6.47, Kd=0.34uM
    28143 4rd6:A (1.944) BS01 GDP 3.6.5.3 GO:0000049 ... Q980A5 25690901 MOAD: Kd=0.52uM
    PDBbind: -logKd/Ki=6.28, Kd=0.52uM
    28144 4rdd:A (1.601) BS01 3LU 3.1.3.48 GO:0004725 ... Q06124 26191366 MOAD: ic50=16.8uM
    28145 4rdn:A (2.1) BS01 6MD ? GO:0003723 ... Q9Y5A9 25412658 PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    28146 4re2:A (2.0) BS01 MVL 3.2.1.25 GO:0004553 ... A2YPH1 N/A PDBbind: -logKd/Ki=4.98, Ki=10.4uM
    28147 4re3:A (2.55) BS01 GIM 3.2.1.25 GO:0004553 ... A2YPH1 N/A PDBbind: -logKd/Ki=8.57, Ki=2.7nM
    28148 4re4:A (2.29) BS01 IFM 3.2.1.25 GO:0004553 ... A2YPH1 N/A PDBbind: -logKd/Ki=6.87, Ki=135nM
    28149 4re9:A (2.908) BS02 3M9 3.4.24.56 GO:0001618 ... P14735 26394692 PDBbind: -logKd/Ki=4.92, IC50=12.1uM
    28150 4res:A (3.408) BS04 BUF 7.2.2.13 GO:0000166 ... P05024 25624492 PDBbind: -logKd/Ki=7.85, Kd=14nM
    28151 4ret:A (4.0) BS07 DGX 7.2.2.13 GO:0000166 ... P05024 25624492 PDBbind: -logKd/Ki=7.59, Kd=26nM
    28152 4rfc:A (1.645) BS02 3O1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25358036 MOAD: Ki=5.7nM
    PDBbind: -logKd/Ki=8.24, Ki=5.7nM
    BindingDB: Ki=5.7nM
    28153 4rfd:A (1.631) BS02 3O5 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25358036 MOAD: Ki=8.9nM
    PDBbind: -logKd/Ki=8.05, Ki=8.9nM
    28154 4rfd:A (1.631) BS03 3O5 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25358036 MOAD: Ki=8.9nM
    PDBbind: -logKd/Ki=8.05, Ki=8.9nM
    28155 4rfd:A (1.631) BS04 BCT 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25358036 BindingDB: Ki=85000000nM
    28156 4rfm:A (2.1) BS01 3P6 2.7.10.2 GO:0004672 ... Q08881 25844760 MOAD: Ki=0.00009uM
    PDBbind: -logKd/Ki=10.05, Ki=90pM
    BindingDB: IC50=4.0nM, Ki=0.090000nM
    28157 4rfr:B (1.5) BS01 RHN 1.14.11.33 GO:0005515 ... P05050 27015802 MOAD: Kd=0.29uM
    PDBbind: -logKd/Ki=6.54, Kd=0.29uM
    28158 4rfw:A (2.4) BS02 3RB ? GO:0003677 ... P19793 26331194 MOAD: Kd=9nM
    BindingDB: EC50=30nM, Kd=9.0nM
    28159 4rfy:A (1.7) BS01 3OU 2.7.10.2 GO:0004672 ... Q06187 25466710 MOAD: ic50=100nM
    PDBbind: -logKd/Ki=7.00, IC50=100nM
    28160 4rfz:A (1.17) BS01 3OV 2.7.10.2 GO:0004672 ... Q06187 25466710 MOAD: ic50=40nM
    PDBbind: -logKd/Ki=7.40, IC50=40nM
    BindingDB: IC50=40nM
    28161 4rg0:A (2.5) BS01 3P0 2.7.10.2 GO:0004672 ... Q06187 25466710 MOAD: ic50=50nM
    PDBbind: -logKd/Ki=7.30, IC50=50nM
    BindingDB: IC50=50nM
    28162 4rg2:A (1.5) BS01 3OO ? N/A Q12888 25590533 BindingDB: IC50=2.9e+4nM, Kd=2.2e+4nM
    28163 4rg2:B (1.5) BS01 3OO ? N/A Q12888 25590533 BindingDB: IC50=2.9e+4nM, Kd=2.2e+4nM
    28164 4rh2:A (1.3) BS02 FC9 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 N/A BindingDB: Ki=36nM
    28165 4rhu:A (2.573) BS01 3QE 2.4.2.8 GO:0000166 ... P9WHQ9 25915781 PDBbind: -logKd/Ki=6.16, Ki=0.69uM
    28166 4rhu:B (2.573) BS01 3QE 2.4.2.8 GO:0000166 ... P9WHQ9 25915781 PDBbind: -logKd/Ki=6.16, Ki=0.69uM
    28167 4rhx:A (2.0322) BS01 3QF 2.4.2.8 GO:0000166 ... P9WHQ9 25915781 MOAD: Ki=1.6uM
    PDBbind: -logKd/Ki=5.80, Ki=1.6uM
    28168 4rhx:B (2.0322) BS01 3QF 2.4.2.8 GO:0000166 ... P9WHQ9 25915781 MOAD: Ki=1.6uM
    PDBbind: -logKd/Ki=5.80, Ki=1.6uM
    28169 4rhx:C (2.0322) BS01 3QF 2.4.2.8 GO:0000166 ... P9WHQ9 25915781 MOAD: Ki=1.6uM
    28170 4rhx:D (2.0322) BS01 3QF 2.4.2.8 GO:0000166 ... P9WHQ9 25915781 MOAD: Ki=1.6uM
    PDBbind: -logKd/Ki=5.80, Ki=1.6uM
    28171 4rhy:A (2.3196) BS02 3QG 2.4.2.8 GO:0000166 ... P9WHQ9 25915781 MOAD: Ki=1.13uM
    PDBbind: -logKd/Ki=5.95, Ki=1.13uM
    28172 4rhy:B (2.3196) BS02 3QG 2.4.2.8 GO:0000166 ... P9WHQ9 25915781 MOAD: Ki=1.13uM
    PDBbind: -logKd/Ki=5.95, Ki=1.13uM
    28173 4rhy:C (2.3196) BS02 3QG 2.4.2.8 GO:0000166 ... P9WHQ9 25915781 MOAD: Ki=1.13uM
    28174 4rhy:D (2.3196) BS02 3QG 2.4.2.8 GO:0000166 ... P9WHQ9 25915781 MOAD: Ki=1.13uM
    28175 4ri9:A (2.9) BS01 dna 3.1.21.-
    3.1.4.1    		 GO:0003676 ... Q9Y2M0 25430771 PDBbind: Kd=0.4nM
    28176 4ri9:A (2.9) BS02 dna 3.1.21.-
    3.1.4.1    		 GO:0003676 ... Q9Y2M0 25430771 PDBbind: Kd=0.4nM
    28177 4ri9:A (2.9) BS03 dna 3.1.21.-
    3.1.4.1    		 GO:0003676 ... Q9Y2M0 25430771 PDBbind: Kd=0.4nM
    28178 4ri9:A (2.9) BS04 dna 3.1.21.-
    3.1.4.1    		 GO:0003676 ... Q9Y2M0 25430771 PDBbind: Kd=0.4nM
    28179 4ri9:B (2.9) BS01 dna 3.1.21.-
    3.1.4.1    		 GO:0003676 ... Q9Y2M0 25430771 PDBbind: Kd=0.4nM
    28180 4ri9:B (2.9) BS02 dna 3.1.21.-
    3.1.4.1    		 GO:0003676 ... Q9Y2M0 25430771 PDBbind: Kd=0.4nM
    28181 4ri9:B (2.9) BS03 dna 3.1.21.-
    3.1.4.1    		 GO:0003676 ... Q9Y2M0 25430771 PDBbind: Kd=0.4nM
    28182 4ri9:B (2.9) BS04 dna 3.1.21.-
    3.1.4.1    		 GO:0003676 ... Q9Y2M0 25430771 PDBbind: Kd=0.4nM
    28183 4rib:A (3.25) BS01 dna 3.1.21.-
    3.1.4.1    		 GO:0003676 ... Q9Y2M0 25430771 PDBbind: Kd=10.3nM
    28184 4rib:A (3.25) BS02 dna 3.1.21.-
    3.1.4.1    		 GO:0003676 ... Q9Y2M0 25430771 PDBbind: Kd=10.3nM
    28185 4rib:A (3.25) BS03 dna 3.1.21.-
    3.1.4.1    		 GO:0003676 ... Q9Y2M0 25430771 PDBbind: Kd=10.3nM
    28186 4rib:A (3.25) BS04 dna 3.1.21.-
    3.1.4.1    		 GO:0003676 ... Q9Y2M0 25430771 PDBbind: Kd=10.3nM
    28187 4rib:B (3.25) BS01 dna 3.1.21.-
    3.1.4.1    		 GO:0003676 ... Q9Y2M0 25430771 PDBbind: Kd=10.3nM
    28188 4rib:B (3.25) BS02 dna 3.1.21.-
    3.1.4.1    		 GO:0003676 ... Q9Y2M0 25430771 PDBbind: Kd=10.3nM
    28189 4rio:A (2.69) BS01 3QX 2.7.10.2 GO:0004672 ... P52333 25453808 PDBbind: -logKd/Ki=9.00, IC50=1nM
    BindingDB: IC50=1.000000nM
    28190 4riu:A (1.651) BS02 3QR 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25614109 PDBbind: -logKd/Ki=7.30, Ki=50nM
    28191 4riv:A (1.631) BS02 LSA 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25614109 PDBbind: -logKd/Ki=7.00, Ki=100nM
    BindingDB: Ki=5950nM
    28192 4riv:A (1.631) BS03 LSA 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 25614109 PDBbind: -logKd/Ki=7.00, Ki=100nM
    BindingDB: Ki=5950nM
    28193 4rj3:A (1.63) BS01 3QS 2.7.11.22 GO:0000082 ... P24941 25383627 MOAD: ic50=93nM
    PDBbind: -logKd/Ki=7.03, IC50=93nM
    BindingDB: IC50=93nM
    28194 4rj4:A (2.78) BS01 3QW 2.7.10.1 GO:0004672 ... P00533 25383627 PDBbind: -logKd/Ki=7.80, Ki=16nM
    28195 4rj5:A (3.1) BS01 3QY 2.7.10.1 GO:0004672 ... P00533 25383627 PDBbind: -logKd/Ki=7.18, Ki=66nM
    28196 4rj6:A (2.7) BS01 3R0 2.7.10.1 GO:0004672 ... P00533 25383627 PDBbind: -logKd/Ki=7.12, IC50=76nM
    28197 4rj7:A (2.55) BS01 3R1 2.7.10.1 GO:0004672 ... P00533 25383627 PDBbind: -logKd/Ki=7.66, Ki=22nM
    BindingDB: Ki=101nM
    28198 4rj8:A (2.5) BS01 3QS 2.7.10.1 GO:0004672 ... P00533 25383627 MOAD: Ki=17nM
    PDBbind: -logKd/Ki=7.77, Ki=17nM
    BindingDB: Ki=553nM
    28199 4rkg:A (2.5) BS01 dna 2.3.2.27 GO:0061630 ... P50534 25452275 PDBbind: Kd=25.7uM
    28200 4rkg:B (2.5) BS01 dna 2.3.2.27 GO:0061630 ... P50534 25452275 PDBbind: Kd=25.7uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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