Zhang Lab

National University of Singapore

Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

GLASS

You can:

Go to the GPCR, ligand, or experimental data tables.
Go to the experimental data table for text mining information in PubMed ID column.
Go to the GPCR page and check other ligands which interact with it.
Go to the ligand page and check other GPCRs which it interacts with.
Go back to previous page.

GPCR

Name	5-hydroxytryptamine receptor 5A
Species	Homo sapiens (Human)
Gene	HTR5A
Synonym	5-HT5alpha 5-HT-5 MR22 Htr5 5-HT-5A 5-HT5A 5HT5- 5-HT5A receptor 5-hydroxytryptamine (serotonin) receptor 5A, G protein-coupled serotonin receptor 5A [ Show all ]
Disease	N/A
Length	357
Amino acid sequence	MDLPVNLTSFSLSTPSPLETNHSLGKDDLRPSSPLLSVFGVLILTLLGFLVAATFAWNLLVLATILRVRTFHRVPHNLVASMAVSDVLVAALVMPLSLVHELSGRRWQLGRRLCQLWIACDVLCCTASIWNVTAIALDRYWSITRHMEYTLRTRKCVSNVMIALTWALSAVISLAPLLFGWGETYSEGSEECQVSREPSYAVFSTVGAFYLPLCVVLFVYWKIYKAAKFRVGSRKTNSVSPISEAVEVKDSAKQPQMVFTVRHATVTFQPEGDTWREQKEQRAALMVGILIGVFVLCWIPFFLTELISPLCSCDIPAIWKSIFLWLGYSNSFFNPLIYTAFNKNYNSAFKNFFSRQH
UniProt	P47898
Protein Data Bank	N/A
GPCR-HGmod model	P47898
3D structure model	This predicted structure model is from GPCR-EXP P47898.
BioLiP	N/A
Therapeutic Target Database	N/A
ChEMBL	CHEMBL3426
IUPHAR	10
DrugBank	BE0004688

Ligand

Name	Harmalan
Molecular formula	C12H12N2
IUPAC name	1-methyl-4,9-dihydro-3H-pyrido[3,4-b]indole
Molecular weight	184.242
Hydrogen bond acceptor	1
Hydrogen bond donor	1
XlogP	2.1
Synonyms	4,9-Dihydro-1-methyl-3H-pyrido[3,4-b]indole, 9CI BAS 00654954 harman e Oprea1_558389 ZINC13130932 1-methyl-3H,4H,9H-pyrido[3,4-b]indole 2H-Pyrido[3,4-b]indole, 3,4-dihydro-1-methyl- A827586 MCULE-2765797747 SCHEMBL4986696 3H-Pyrido[3,4-b]indole, 4,9-dihydro-1-methyl- ACMC-1AST1 Dihydroharman NCGC00245167-01 TC-166607 1-Methyl-3,4-dihydro-beta-carboline BDBM50136493 HMS2270L19 REGID_for_CID_5316718 1-Methyl-4,9-dihydro-3H-beta-carboline 3,4-Dihydro-1-methyl-2H-Pyrido[3,4-b]indole AC1NSUKB CHEMBL295234 MLS001048999 SMR000387013 1-Methyl-3,4-dihydro-2H-.beta.-carboline 4,9-Dihydro-1-methyl-3H-Pyrido(3,4-b)indole AKOS006282713 NCGC00245167-02 TRA0052609 1-methyl-3,4-dihydrobeta-carboline 525-41-7 BJRYQXFFBCGJRM-UHFFFAOYSA-N HMS3561H09 SCHEMBL141724 1-methyl-4,9-dihydro-3H-pyrido[3,4-b]indole 3H-Pyrido(3,4-b)indole, 4,9-dihydro-1-methyl- AC1Q2PFX CTK8C5609 MolPort-001-825-653 ST50984240 1-methyl-3,4-dihydro-2H-pyrido[3,4-b]indole [ Show all ]
Inchi Key	CWOYLIJQLSNRRN-UHFFFAOYSA-N
Inchi ID	InChI=1S/C12H12N2/c1-8-12-10(6-7-13-8)9-4-2-3-5-11(9)14-12/h2-5,14H,6-7H2,1H3
PubChem CID	160510
ChEMBL	CHEMBL295234
IUPHAR	N/A
BindingDB	50136493
DrugBank	N/A
Structure SDF download
Lipinski's druglikeness	This ligand satisfies Lipinski's rule of five.

Experimental Data

Parameter	Value	Reference	Database source
Ki	845.0 nM	PMID14643338	ChEMBL
Ki	845.0 nM	PMID14643338	BindingDB

zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417