Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

I-TASSER C-I-TASSER QUARK C-QUARK LOMETS COACH COFACTOR MetaGO MUSTER CEthreader SEGMER FG-MD ModRefiner REMO DEMO SPRING COTH Threpp BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign GPCR-I-TASSER MAGELLAN BindProf BindProfX SSIPe ResQ IonCom STRUM DAMpred

TM-score TM-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

[Back to server]

Modeling of Pfam protein domain faimilies by D-I-TASSER (Page 52)

Search by Pfam ID:

Go to page (83 pages in total): [First page] << < 47 48 49 50 51 52 53 54 55 56 57 > >> [Last page] [All entries in one page].

# Pfam ID D-I-TASSER models ranked
by estimated TM-score
(click to view)
Full name and representative sequence
5101 PF17493
(DUF5428)
click to view
Estimated TM-score=0.55;
hard target.
>Family of unknown function (DUF5428) (Length=63)
MEQQRSEQRRERRVRSKSEDRKSMSDVGQSAVNREADIKKDMGPSVSMTVVGENVEFTQHFHF
5102 PF02451
(Nodulin)
click to view
Estimated TM-score=0.55;
very hard target.
>Nodulin (Length=188)
IIPENPKFKKFVTDCTSHVAERCSSGSEALHGEGGLALCLFDSMENCLVEHGAAKVNQRSLFVLPKGSTPIEPKDSLPSF
IPSPPIPPKSKFECWCDSLISCVCTWTSMVPSTRLLNNQQLGQGFYYFQYEPLLQFRTVLRTCSLESARTCLNAPNVATS
PLAACLIPSMNQCVYPSGAESGTGSLPI
5103 PF18291
(HU-HIG)
click to view
Estimated TM-score=0.55;
easy target.
>HU domain fused to wHTH, Ig, or Glycine-rich motif (Length=120)
MSAMYDLIEKPNPKGDDEKQLLYPRIVSSGTISTEKLIERITGASSLTPGDVKSAITEISDVMAEYLKDGYTVELGDIGY
FSPSIKGRGVSNKKEIRSTSIYFDNVNFRASKKFRQNLYG
5104 PF05608
(DUF778)
click to view
Estimated TM-score=0.55;
hard target.
>Protein of unknown function (DUF778) (Length=174)
LPVVSWLAPFIGHIGLCREDGVILDFAGSNFINVDDFAFGPPARYLQLDRTKVLVSASLLSRIWLCMDFVSFVSNYKNFL
IFIKCVCLWQCCLPPNMGGHTCKYGFKHTDFGTARTWDNALSSSTRSFEHKTYNIFTCNCHSFVANCLNRLCYGGSMEWN
MVNVAILLMIKGKW
5105 PF10975
(DUF2802)
click to view
Estimated TM-score=0.55;
hard target.
>Protein of unknown function (DUF2802) (Length=68)
GMGRRVIELEKRLHQQSERIEESTQQDPQAKLYTRAMKMVALGAGVDELIKECELPKAEAELLIRLHR
5106 PF14918
(MTBP_N)
click to view
Estimated TM-score=0.55;
hard target.
>MDM2-binding (Length=270)
MDRYLLLVIWEEGKFPSAASREAEHGPEVSSGEGAEKQPDFTAANVYHLLKRSISASINPEDSTFPACSVGGIPGSKKWF
FAVQAIYGFYQFCSSDWQEIHFDTEKDKIEDVLQTNIEECLSAVECFEEEDSNSRESLSLADLYEEAAENLHQLSDKLPA
PGRAMVDIILLPSDKDPPKLKDCLPTVGALKHLREWYSAKITIAGNHCEINCQKIAEYLSANVVSLEDLRNVIDSKELWR
GKIQIWERKFGFEISFPEFCLKGVTPENFS
5107 PF04499
(SAPS)
click to view
Estimated TM-score=0.55;
hard target.
>SIT4 phosphatase-associated protein (Length=484)
MEHLLDMKCDEMITYLIDNQPNLVEKFINHLSNPPLMDFLLKLISTDKPDNSTGIIEFLQNQDLISHLINALDVSDVPES
DTEKGSKSHELLLIEQSSAADFLKALITISANSTADNSTIGPNELTRELVSKQQMTRLCDIMLKGGYALANGVGIIIEII
RKNNSDYDILPVLYITLESHPPTGRDPIYLGHLLRVFGERISDFNELLIKEHTDSKLRTPFGVIQPLGFERFKICELIAE
LLHCSNMALLNDNKGFDVVKERDELRTKMKEYDPISFKYNEAITLPHEDEENEEINDADETGNSIRDDTIDEFNKQEDTI
DEDEPHANSNLTEEQIRANPVVGDFLKIALFDTQIISNILSMFFRFPWNNFLHNVVFDVVQQVLNGSMDIGFNKFLAIDL
FHSADITNKIIEGQRLCTDYETSHNGLRLGFMGHLTLIAEEVVKFVQLFPSNTLSEYINEKIESDVWEDYVSNVLYDTRE
KYNA
5108 PF06934
(CTI)
click to view
Estimated TM-score=0.55;
hard target.
>Fatty acid cis/trans isomerase (CTI) (Length=682)
APTRLFEDAETTQEWRDAGFHPVLNERDQSMAANLEAGLIARLLQQKERHPLPDQVQLEGFDFSIDREQTCPTIEEYEQY
EKDNPNWGMPFGMPNLTNSEYHTLMTWLENGAIMNMHTPISDQEQAQINQYETLLNHSDLKNQLMSRYIYEHLFLSHLYF
SELSEKPRFFTLVRSATPPGQPVKRISTRRPYDDPGVERVYYRIIPEQGTIVDKTHMPFALNKQRISNWKKWFIEADYSV
TQLPSYEPEVAANPMTAFIDMPVKSRFKFMLDNAQNTIMAYIKGPVCRGQLALNVINDRFWVFFLDPDKADIPEVNEFYR
SQADNLKLPAEQESNTLPVTNWVKYARQQARYLEAKSEFTNNWFKHGENLSTDVIWDGNGTNPNAALTVFRHFDSASVVQ
GLVGEQPKTVWILDYALLERIHYLLVAGFDVYGNFGHQLMTRMYMDFLRLEGESNFVTLLPADMRHQLQSSWYQDQSPQL
SDFLQRNVKPFNQPTSVVYKTDDPKTELLNMMRKRLSPVLLPRYEITDTALSDKTEKELKRIGQVRGEGLQTVPQITMLM
VRSKSGKDELFTLLHNNAHTNISSLFDEESNRDFANDDMTIVRGVVGSYPAAFFSLNENQVKEFVDQFSAIQNEADYVKL
LDSFAIRRSSEKFWPFSDRIHNWYRTNQPIEFGLLDYNRFEN
5109 PF17083
(Swm2)
click to view
Estimated TM-score=0.55;
hard target.
>Nucleolar protein Swm2 (Length=130)
LDGLTDLNKIPKEYSLLLEPYFQSIAKHTHLKSKGLKLCRFNFRKWDAQDGTVDPEAIRRCLDLWYVLKGKEYKKLKNPP
SVYNIIKDEVDVSHMENLKVTRLEFDEFGKPITNPLHNLILEEVEVNDFI
5110 PF14800
(DUF4481)
click to view
Estimated TM-score=0.55;
very hard target.
>Domain of unknown function (DUF4481) (Length=292)
HNGQVLTVLRIDNTCAPIAFDLGAAEEQLQTWGIQVPADQYRSLAESALLEPQVRRYIIYNSRPMRLAFAVVFYVVVWAN
IYSTSQLFALGNHWVAVLLVTLAAVSLTLALVLIFERHQRKANTNTDLRLAAANGALLRHRLLLGVTDTVEGCQSVIQLW
FVYFDLENCVQFLADHVQEMKTNQESLLRRRLSQLCVVMETGVSPAAAEEPEDPMEEAPLLPSRPEPQERPLMQTELHQL
VPEAEPEEMAQQLLAVFGGYYIRLLVTSQLPEVGGTRHMDSPRVPCPCQFIE
5111 PF16076
(Acyltransf_C)
click to view
Estimated TM-score=0.55;
hard target.
>Acyltransferase C-terminus (Length=75)
LVKGHWPKEIHFHIKYHPSSSLPSSDEELGEWLKKRWREKDELLTQFYETNSFPGPVLRETLMSRLKILALLVGW
5112 PF17644
(30K_MP_core)
click to view
Estimated TM-score=0.55;
very hard target.
>Core domain of 30K viral movement proteins (Length=138)
LGTLKSITDKLRKLGGESSQPFIQFYKVQCMYIPLFSRVDGDNGEITVSLIDDGKEAAGQDPIIQSITFDASQMAMVELS
MNFFVEKKDMDFIGIHVSAENVPVQDRAYGSINLAFFTNEQSVPMMQEEKKSSYLMID
5113 PF04746
(DUF575)
click to view
Estimated TM-score=0.55;
hard target.
>Protein of unknown function (DUF575) (Length=100)
AFDFSRPFCSRVTNFALGVIKAIPIVGHLVMGVDWLISHCFERGVSHPGFPSDIAPILKVEKIAGRDHISRIENQLKSLR
KTIEVEDLDKVHGQYQENPY
5114 PF12789
(PTR)
click to view
Estimated TM-score=0.55;
hard target.
>Phage tail repeat like (Length=60)
EYSKKTHIHYINQIPSLKETLETKADKTHTHSISDITNLQETLNRKSAVGHTHTIANITN
5115 PF06242
(DUF1013)
click to view
Estimated TM-score=0.55;
very hard target.
>Protein of unknown function (DUF1013) (Length=139)
LEVKGIADGDVAQGIKGMDPVASGQLTRAEIERCQNDSDARLQVSESKYKLPPIAPRKGPRYTPVSRRQDRPDAIAWLVR
NHPELTDAQISKLVGTTKPTIQSVRDRSHWNSANIKPVDPVTLGLCTQIELDAAVQKAA
5116 PF05776
(Papilloma_E5A)
click to view
Estimated TM-score=0.55;
hard target.
>Papillomavirus E5A protein (Length=91)
MEFIPVDVSTQATSKSLLPLVIALTVCVVSIITILCISEFLVYTNVLVLTLILYVLLWLLLTTPLQFYLLTLSLCFLPAL
CVHQYILQTQE
5117 PF14456
(alpha-hel2)
click to view
Estimated TM-score=0.55;
very hard target.
>Alpha-helical domain 2 (Length=320)
LADFILLAHKKGIRIPDSIYTTTSELMTQQFANYARSQVKNVRVELPLDVSIVAIDKKIEFAANATDRFQGIYQLKDSVE
RLNAASPGLGWFITDTIRKGHGVGLTTYDPCRIANCVQLIWFDSETDQEAAAEVLDIDEKNVTEAHIEQARDERTFMPSD
FLASVGGHKHLLSWSQTKKEKAACRSMSASRVRACIHKLKLVEADRALVMAALEFHDSIKVRKANAAIAPNGWFEHENLH
EFECLDALGSLAFIVWDDSEFAREAITHYEEYAMNGEGSHSQLVGLFVELDEPASWGPFIDAYKLYIKRYAAFSNFIGAL
5118 PF17427
(Phi29_Phage_SSB)
click to view
Estimated TM-score=0.55;
very hard target.
>Phage Single-stranded DNA-binding protein (Length=123)
MENTNIVKATFDTETLEGQIKIFNAQTGGGQSFKNLPDGTIIEANAIAQYKQVSDTYGDAKEETVTTIFAADGSLYSAIS
KTVAEAASDLIDLVTRHKLETFKVKVVQGTSSKGNVFFSLQLS
5119 PF11180
(DUF2968)
click to view
Estimated TM-score=0.55;
hard target.
>Protein of unknown function (DUF2968) (Length=177)
PDQAIALTPDEAKQSATGNVAELQQMIHGPDLTEMRTTYNGSYGASLLFYGKEMTYYVALFQQKNFWRVIKTQDDQRAEM
IYKDFVRQTAQLSDVEIRRTRLEAQKALTDRLIALSQDRANRLQADLTIARQQQAIVSNQQQQTRAEATALQQQKSQAQA
QLRDAQRQVRDLQRQLD
5120 PF10964
(DUF2766)
click to view
Estimated TM-score=0.55;
hard target.
>Protein of unknown function (DUF2766) (Length=79)
MSESLNREQEIESDLVACQLVIKQILDVIEIIAPAEVREKMSHQLKSIDFSKHPAGADPVTKRAIEKAISLIELKFTRH
5121 PF18984
(DUF5717_N)
click to view
Estimated TM-score=0.55;
hard target.
>Family of unknown function (DUF5717)N-terminal (Length=877)
MREIVDRLLQGKFEYEEKSLDFSTPRIELSMSPGDVTEGSFTIFGPENRLVDGTVSSTDIRMEVLTKAFSGSPYEVSYRF
SAVGLSSGDVLQGDFRIVSNQGEYVLPFVVTVRHEQIVSSLGDIKNLFHFANLAKTDWEEAVNLFYSDEFLSVLKGNDDQ
YESLYRGLSASPGNEQNVEEFLISINKKQPMAFLFDQKELVIDFTGIFHDNSILITRNGWGYSKLFAKPECDFIMLDKYD
ISEDDFTGSTCHIKVRLRPDKIHEGNNFGKIVFYNAFSSTSIPVTVSVNVTGKHPTADYQEKKKLIVQLIKVYENFRCKK
ISSKAWLSETGKVIARMNAVDEKDLAFRLYTAQYYITAGRVNEGKWILDQLAREVEDAPGDELYSYYLYLSSLCSKEDSY
VNDISDRLEGIYRRNKDNWRIAWLLQYVSEESAMSGSRKWMMLSEQFSYGCTSPILYLEAMNLLNDSPSILTRLEDQELC
ILEYGAKKQMISLNLIDQIVYLSARVRNYDKRLFRILKSCYEIKQGDDVLEAIVALLIKGGETGKYTFEWYRKGVERELR
ITRLYEYYMMSIYTDENGLLPCDINKMVLMYFSYQSDLEYDKNAILYRYIHERRDEYPELYDAYVPQIEKYLMAQLDKGR
VGKDLGYLYKNLITKQMVDAANASKVLTALYTCEITVEDPKICGVLVVYDKCEKEMRYPVTNGRAYVPLYGSDYTVLLID
HDDNRYAKSIPYNNVKMMLPGKIAGYAIPYIQKGKENLDLFLCDLGKNAYTIDMDNVGRYRDLAESELVRKSCRNEIRNN
LIRFYYENDFTRQLTEYLVDIDPTDMTAKERNELIELMVMGGLYEKALEWILVYGCYGIDAKIILRMCGRLLDRDMY
5122 PF10254
(Pacs-1)
click to view
Estimated TM-score=0.55;
hard target.
>PACS-1 cytosolic sorting protein (Length=413)
VYDQLNHILISDDQLPENIILVNTSDWQGQFLSDVLQRHTLPVVCTCSAADVQAAFSTIVSRIQRYCNCNSQPPTPVKIA
VAGAQHYLSAVLRLFVEQLSHKTPDWLGYMRFLVIPLGSHPVARYLGSVDYRYNNFFQDLAWRDLFNKLEAQSAVQDTPD
IVSRITQYISGANCAHQLPIAEAMLTYKQKSPDEESSQKFIPFVGVVKVGIVEPSSATSGDSDDAAPSGSSVLSSTPPST
SPAAKEASPTPPSSPSVSGGLSSPSQGVGAELMGLQVDYWTAAQPADRKRDAEKKDSPTTKNTLKCTFRSLQVSRLPSSG
EAAATPTMSMTVVTKEKNKKVMFLPKKTKDKDVESKSQCIEGISRLICTAKHQQNMLRVLIDGVEWNDVKFFQLAAQWSS
HVKHFPICIFGHS
5123 PF04780
(DUF629)
click to view
Estimated TM-score=0.55;
hard target.
>Protein of unknown function (DUF629) (Length=540)
RVRSYWNSMSFNMRKDLLKIRISDLKAHFSSVKDGLASGVLSEALSFVEVNKVWKFWVCCRCGEKFKDSELHMQHVVQEH
MGNLLPKMQSVLPQNIDNEWIEMIVNCSWKPLDISAAVKMLKNESKCQQNELIDEFYTGNNTEECIDCFKDAWESSPEKG
MLGDGCSCGNLVKSDSDKIPNQGSRECDGNEGSKAYLLANSWPLADDSERAKLLEKIHVLFEMLIKHKCLAGSHLSKVMQ
FTTDELQGIASGSQLLNYGVDQTPTCICFLGASQLRKLLKFLQELSHACGLARSSDKTSSAMDDANSLNRDFDIKENVLL
NGDASCLLLDEHLLPTENTSTASHVAVTDDAATETSPIICNENGVQPDGGSLLSWIFTGPSSVEQLASWMRIREEKSNQG
MEILQMLEKEFYHLQSLCERKCEHLSYEEALQAVEDLCLEEGKKRENVTDFGSRSLESVLRKRREELRESENEVMLISNR
FELDAVINVLKEAESLNMNQFGYEEHYNGVTSHLCDLESGEDDDWRSKDFLHQMDACIEV
5124 PF15702
(HPS6)
click to view
Estimated TM-score=0.55;
hard target.
>Hermansky-Pudlak syndrome 6 protein (Length=803)
MAGLVLKQLSDFGDFSHGKELTEILSLNNNEQINSVRMSPDGRHIHVVLRKPKYERPQLAPNQKKLDLCVNVPIVDIFYL
EHHGGSSSGAAVVAVVYESGKVEFWKFQECKSGWHLLQTSQLCNSPRARVVSVCACSNLIIWCEERPPSESSPVPSATRN
KLRYCVCRRDFEVKETAVNLGGVKIALHNNPDFTVVSSGEYVHLLPDLKSKPLLNISKFFLSWSPRYDSFTVSTTCKNTP
LKKLSAKESDFMKLVIDCLGYLSTLEPPEICSFSPTACGGLLLLLSTGWLCLLQKDGVLRQVYKLEDNCLVNYSTHTSLG
MYEDTLALLMGQNLHLIDLNCGRELEKIVLMSEALLYTNRADMCTPHLLSETGLFVVVSRGTDSRDCSFRIKSPGFSTVE
SIHPGALLVEAVFEEACKYYQQRSLSSTPLTVDSLKKGGRFQAPISLASILFSYLWQDKLMGSLEAELKALVSLEEVKGT
LVRGSVKEVEAVCESLVEKEVLRLLSSPELDKEALLYLNSIFSIFPSEGWKAAHSALQLHYNGEGFLSSRAPPDVWKTVL
SAAKSTSSTSSAALPVFELLCRSVFHFQPSWLPRFLELAQKEQGSTGGRGGDCNESNVPLYKRALYLLSSLNPDRDQQQD
LEVELLLVSGRPNAILQALRILMSKKQWYRVTQVAQKCCKQSPLLNKEIFTILLCEVAHHRDLDPYLDLLWTLCPEDFTV
TTILNLVLKNLPSPNTPSHSSSFLASSSTSSTPPPFTDPHSTQLTIGLLKPLLRKVLQRETKPSQRYVDILQSPSFPPPA
LPR
5125 PF06422
(PDR_CDR)
click to view
Estimated TM-score=0.55;
hard target.
>CDR ABC transporter (Length=91)
VPTGPGFENIADANRVCSTVGAVPGNNIVNGTNYLRLAYAYENANKWRNLGILIAFAVGFLVIYICLTEFNKGAMQKGEI
VLFLKSSLKNH
5126 PF03823
(Neurokinin_B)
click to view
Estimated TM-score=0.55;
hard target.
>Neurokinin B (Length=58)
MRSALLFAVILALSLARSFGAVCEESQEQVVPGGSHSKKDSNLYQLPPSLLRRLYDSR
5127 PF10829
(DUF2554)
click to view
Estimated TM-score=0.55;
hard target.
>Protein of unknown function (DUF2554) (Length=76)
MFTKTLSVVLLTCALFSGQLMAGHKGHEFVWVKNVDHQLRHEADSDELRAVAEESAEGLREHFYWQKSRKPEAGQR
5128 PF05095
(DUF687)
click to view
Estimated TM-score=0.55;
very hard target.
>Protein of unknown function (DUF687) (Length=529)
IHLVGNDGMYGHSGGNNISEFLCIADTNTQEPADYQVSTTYINGSWQTETESQLEGMHISGLRGEPVRVLYNSGSGLTTS
GFLDRRNSVSPTHPLCVALLEVLNSFFSHSENASSRHTIIFYGDGGAYVQQALDYCRFSNRVDCIGIAPTIYVVGHPSVH
HFRVTGDLTTLLDRYGYNHSNVSTLGYSAGAEGLILPGLRDPSYQYVLGIRNLFQLNGGPITDPAVAMSLIQMGSDMRDF
TQREAEYNNTDNPHEALVNPHPSTCPDILLSGIFLIPSVVAIMQDVFVRSMLPVEDRNFYWITHIGYTAGLVQRLVLMFT
NRREVRFGHRRARLLARSLTAPMLLISAAESINYAQRLQRPVPILQAIYFGGAVMSGTWVVLAIGNTCLTRFRARAQRLG
LRLMGEHEQAEDGNGERRVVRVADAARRGVAEALPVMCAGVVAGLGAGILNGCSIPSALNNPINATANNLPENRTWIFDG
DILRNPSRSWVSGDWFAVSATVSLILGFIVICVSIGVMVASVRRNQYRR
5129 PF01093
(Clusterin)
click to view
Estimated TM-score=0.55;
very hard target.
>Clusterin (Length=432)
NLKSFSEVGEIDADEEVKKALIGIKQMKIMMERKEKEHTNLMSTLKKCREEKQEALKLLNEVQEHLEEEERLCRVSLADS
WGECRSCLENNCMRIYTTCQPSWSSVKNKIERFFRKIYQFLFPFHEDNEKDLPISEKLIEEDAQLTQMEDAFSQLTADVN
SLFNRSFNVFRQMQQEFDQAFQSHFVSDTDLTEPYFFPAFSKELMTKADLEQRWDIPNFFQLFCNFSVSIYESVSETITK
TLRAIEDLPKQDKAPDHGGLISEMLPGQDRGVCGELDQNLSRCFKFHEKCQKCQAHLSEDCPDVPALHTELDEAIRLVNV
SNQQYGQILQMTRKHLEDTTYLVEKMRGQFGWVSELANQTPETEIIFNSIQVVPRIHEGNISKQDETMMKNLSILPSSNF
TLKIPLEESAESSNFIGYVVAKALQHFKEHFK
5130 PF13163
(DUF3999)
click to view
Estimated TM-score=0.55;
hard target.
>Protein of unknown function (DUF3999) (Length=422)
DFKSLAPLSLSGEGPWYRLELPLAVQLHASQTDLRDIRVFNAAGEPQAYALARQQAQTTEQHTLSDVKWFPLYSSADAAD
STPSVRVQSTTNGTLVEVQPSTQLEAGEEVLRGWLLDASAIKAPLQQLVLDWTSERDGFQRFSIEASDDLQHWQPWGEGQ
VARLSFADERVEQHEVALPGQTARYLRLLWNTPQTAPVLTSAQLQSSTTSSLPSPLVWSQPLKGSSAKAGEYTWQLPMGL
NLERVRIALTQANSLAPATLYGRRESSLPWQPLGNGLLYRLTQNGQDVQQNELQLPGQTVQQLRLVVDERGGGLGAEAPS
LEFAVRGTQLVFLARGAGPYTLALGNPTASAANLPLATLIPDYSAQRLKQLGQAKVEGAAQLASATVAPAAAVAAGGPDW
KKIGLWAVLLLGVLALAGMAFS
5131 PF09887
(DUF2114)
click to view
Estimated TM-score=0.55;
hard target.
>Uncharacterized protein conserved in archaea (DUF2114) (Length=453)
PYFIVASVEVGNTTTKCILTATNLEDGKTRLVSKIVSMTRDVRPPKEGEEVFGRTLNGVELTRQSVAEMVRDTLLRAVKQ
SNLDIKEDIHFVVRSTGVVAGFDTPDEVGEFIKALADGCLMAGVPPNRMTPPMGMSNVPERFRKHTKLEQVVFDGAVASV
TPPTGATGVEIVANEMEGELATAGIKEGAKWVDIDFRNPCISIDFGTTLDGRVISPDLPYAKTIGNFCGYAGAIPDAIIK
GTGLVDSKKGTALDVADKTSLDMFTLKMKGKAIKEYAERIHEHIQIERVPKDRKRYGSVPVNSEAADSIGVVLIGCDVGN
NGTDMDKLSEIGAEIYQKHNLKTLFAVIDEVMAKVVQRLVKVAQEEGLVFEDTVIGITGRAGITGAKPRLILQYLHELGI
NNKIEENVVFVDDGLARGAAVMARCMNSMGTSFNPLGGHRGGKCILGQRIKLQ
5132 PF15038
(Jiraiya)
click to view
Estimated TM-score=0.55;
easy target.
>Jiraiya (Length=171)
LTSLGLLCLVSLLLALLSLVFLLKISPMTTADMRDLRRTEQLTIISADEYVVVYEVTLALCALTLSLNLCCLLVCAIQFL
FAVKLVKSPQGGQRTNKYLQKSSITRVCAVGGFFISIPVFLTGIILYTFIQFHSTPAIVTSVFIGLGIIFCGCAMVHNVF
VWQKEKTNAVR
5133 PF04709
(AMH_N)
click to view
Estimated TM-score=0.55;
very hard target.
>Anti-Mullerian hormone, N terminal region (Length=369)
SAYERAFLGAVQRARWGPRDLATFGVCTPGDRQAALPSLQRLGAWLRDPGGQRLVVLHLEEVTWEPTPSLRFQEPPHGVA
DPPELALLVLYPGPGPGPEVTVTRAGLPGAQSLCPSRDTRYLALAVDRPAGAWRGSGLALTLQPRREGSLLSTAQLQALL
FGDDHRCFTRMTPALLLLPRSEPAPLPAQGQLDTVPFPPPRPSAELEESPPSADPFLETLTRLVRALRGPPAQASAPRLA
LDPDALAGFPQGLVNLSDPAALERLLDGEEPLLLLRPTAATTGDPAPLHDPTSAPWATALAHRVAAELQAAAAELSSLPG
LPPAAAPLLARLLALCPGGPGGPGGPGDPLRALLLLKALQGLRAEWRGR
5134 PF02067
(Metallothio_5)
click to view
Estimated TM-score=0.55;
easy target.
>Metallothionein family 5 (Length=41)
MVCKGCGTNCQCSSQKCGDNCACNKDCQCVCKNGPKDQCCS
5135 PF17238
(DUF5311)
click to view
Estimated TM-score=0.55;
hard target.
>Family of unknown function (DUF5311) (Length=187)
INEHEILSEVLRCTLKINKQWGAAPYAMYYESVTGRPVISSEEIVPRLVNILESGYAMSIGQRTWSDLGTDRAWEKELEA
QKNLRTFSIEMLLSLSALCQRAGSWGKVFTIMEHYLQYLVPKKVMHNNVGETLSDICSSILVQATSQFAQVMFESAFDIF
LLVSYLLNISEQVNMSQQDICKLRLEL
5136 PF02999
(Borrelia_orfD)
click to view
Estimated TM-score=0.55;
hard target.
>Borrelia orf-D family (Length=100)
SLPQKPTLTNKEDIENLMLDEAELFRYSTALNVWLLTVKSYVIKYYPNDKFPVFENFDPVFGDENGTKETNILKNRITYY
NRYIEKTEPIVFGCYKKYSR
5137 PF11880
(DUF3400)
click to view
Estimated TM-score=0.55;
hard target.
>Domain of unknown function (DUF3400) (Length=45)
SRYNDDSGTTADYIVVEMAKHLLGENWMPDYVKRANDGGIERVLV
5138 PF12334
(rOmpB)
click to view
Estimated TM-score=0.55;
hard target.
>Rickettsia outer membrane protein B (Length=223)
INFGSKGAHADTILNVGEGVNLYATNITTTDANVGSFVFNAGGTNIVSGTVGGQQGNKFNTVALDNGTTVKFLGNATFNG
ETTIAANSTLQIGGNYTADCVASADGTGIVEFVNTGPITVTLNKQAVPVNNLKHITVSGPGNVVVNEIGNAVNYHGVATD
TIAFENSSLGAALFLPSGVPFNDAGNAIPLTIKSTVGNETATGFDVPKVIVLGVDSVIADGQV
5139 PF11243
(DUF3045)
click to view
Estimated TM-score=0.55;
hard target.
>Protein of unknown function (DUF3045) (Length=88)
MFVVHTIYENEGNTTRDYGHVNQFFRCNPEFRAQKDERIFKKCVEQGFIYIKHWMQGNKVRTTYHRSLTELNDELIYNRA
VNQTLKDE
5140 PF03790
(KNOX1)
click to view
Estimated TM-score=0.55;
hard target.
>KNOX1 domain (Length=42)
ALKAKIVSHPHYSNLLQAYMDCQKVGAPPEIAGRLTAVRQEY
5141 PF18177
(La_HTH_kDCL)
click to view
Estimated TM-score=0.55;
hard target.
>La HTH in kinetoplastid DICER domain (Length=89)
VMRRLKKMLRFGSPYYEHFVRKGVWAHILCSDGWVPLQLIEEELAADTTTPVAKLPSKEKLKIVESLLCQHDNFQRFEVG
YCLLRRSPF
5142 PF19146
(DUF5828)
click to view
Estimated TM-score=0.55;
very hard target.
>Family of unknown function (DUF5828) (Length=176)
FEEWDEWRPKSHERLGEDVNEKTAEQASVGEGEGEKAGKNPDEDLRTAGEKLSESYERVEEGDNEGAVEQWQDSINYVAR
AADSAGRKALRAVEDTVYRKVMTQLAPYYFDNELVSANIQKTARGGDEDQFVFEVNINDDDLKAAVSDRLASYEDSVDRW
HIDTEKQTEIAEVVEG
5143 PF09898
(DUF2125)
click to view
Estimated TM-score=0.55;
very hard target.
>Uncharacterized protein conserved in bacteria (DUF2125) (Length=307)
WFYASSRVQDEINHWVVREAAQGRNWSCGSLSFGGFPFRFELICEAPSLAFTGASQWKADAARAHAVAQVWDPQHIIAEF
KGPARIVETATGKELTANWSLLQASGVGANGKPERVSVSANDYALTQGSTSLFAAKHVEVHVRHHPGDAGPTLDVAAGMH
AATGPALGGTAPAPVDGELQAQVTAVPEFRSMPLDERLRLWQGAGGRLNLVLGKLSSGGGTMVTTGNLGLDDRGRPSGEA
QLSVVGPERLVAALGASGLMPADLAGFAPMVMAAGTPTQVDGRKGAAFPFQFRDGRVFLGFIPLGKI
5144 PF12926
(MOZART2)
click to view
Estimated TM-score=0.55;
easy target.
>Mitotic-spindle organizing gamma-tubulin ring associated (Length=89)
SAPDSPALVVTSNVQKYAIKKKKVLNAEEMELFELTQAAGITVDQEVFKIIVDLLKMNVAPQAVFQTLKAMCAGQRVADS
NGGESSTIS
5145 PF13078
(DUF3942)
click to view
Estimated TM-score=0.55;
easy target.
>Protein of unknown function (DUF3942) (Length=125)
LDQTISKLKAYIGEDHEEKKLIEKFNELTPIFKKMDNEFPKSGNVEHLVISYSDNKYVKIGSDKLELRLDKERNVIVVYN
HKGMQATTLDEIVLQENELYCVGRGEKLTEDILSDYLNEVFGEIL
5146 PF18799
(LPD5)
click to view
Estimated TM-score=0.55;
very hard target.
>Large polyvalent protein-associated domain 5 (Length=151)
YDRVTYNPPRTIWSVSREANASAFGNWPRELAKGDTREEAIAAFKTRAAELLAEERAPTKGATFEIYSKRAGGAREFFIG
KKIGRNVAELKAGFPDLKAARAYKAENQAELEDLLAKYKAVPPVRNTQNAPRIGEDYRKGADVTPEQFQEA
5147 PF19072
(DUF5768)
click to view
Estimated TM-score=0.55;
very hard target.
>Family of unknown function (DUF5768) (Length=126)
VVNLGTSAVIGLHCMLVCGSTFDAYHQIELDAMLAQRRLLADFLCTANGAWSTFASRRYANLQRLPEVLVARGWSVKDVP
VRPWMWGPAAAPGAETLVDGPALWIKRPDLPHTMTLVFNRARLMLV
5148 PF19173
(DUF5855)
click to view
Estimated TM-score=0.55;
very hard target.
>Family of unknown function (DUF5855) (Length=185)
MDACDPNADIENLRQLIKINTGVDVKLTKKEICQAYEDIQGGKLPLPPLVMNSSRTYLVDKKSPLKPNDYELLFDSSTKR
ADLKKVARKVDLKNVDQMTKSQIVDAIGKRLRYMKIHEPVKFARRTRVAVNKTTAVNEINTAVNTVNNTTQTNNLNVNRT
NNLNTNRSNNGLNTNRVNTNRVNTN
5149 PF11351
(GTA_holin_3TM)
click to view
Estimated TM-score=0.55;
hard target.
>Holin of 3TMs, for gene-transfer release (Length=122)
GILEGVNSLVSKFKLSPKEQEAFELQVKALLQQQHAELEATYRKEVEAKMEIMKAELVQGDTYTKRARPTIVYAGLIFIF
IVHVLFPIIVYLSGHPVPDIQLPDDFWWAWGSVVSVYGIGRS
5150 PF17359
(DUF5385)
click to view
Estimated TM-score=0.55;
very hard target.
>Family of unknown function (DUF5385) (Length=221)
NGNFLMILIIIIPIVLVVVFIMRKKRKQNGENQTSVNNKDKSDTNEVWTTIKKYLRSIDDKGKEVIDSYVVKRAEPHNLV
QMTKQQRIDYKNEQKAIKALKTTNPEQYKIEMERIKKEKRAKPKELYVVLFTTRNAKTLIIDEPRAIECEVRLVKINKKE
NRREIDVVRALDYEEEMLWIEPIKAKDDEIYNKRLEADKKKQQKAAQRRQKQLEKQKNKTN
5151 PF08600
(Rsm1)
click to view
Estimated TM-score=0.55;
easy target.
>Rsm1-like (Length=91)
AFALAFFGWDSVADGAAGLAGCGACFRRLGLWMYKPKNNGDVSVYDALDVATEHMEYCPWVSGKAQSGTGKSSEKSAELR
SGWELLAQALK
5152 PF14027
(Questin_oxidase)
click to view
Estimated TM-score=0.55;
hard target.
>Questin oxidase-like (Length=328)
FHNHIVHHILTIYALGATPDEIRAAYDHNKTYQRPVLPTTQSVVESMHDKTQFQQHLGNEKHFPNYLAFFQQEIEKKGVA
DVLNEYLFSGSECAETMLARLFGGLLHPLIHLGFGLEFDQPAIVAEALAQTAVHEDWIGRLYLLPVEKAAGGIGKPGKKT
MLQILNEIRADKKLAGSVKWEDGNKIRDGVLKRAPDEMIKYAAQVSVSAEQMEEKLAELLNLVAYFTGAAQRPPKQVKLD
FFLMHCVTSSIFLSKIVTLPYLDTRTKLRVLEWKGRADLVFYVSRGVPNLLLEEVTTYEAPNDWKTIFHESSVHPRDDGH
LSKLVRAL
5153 PF07141
(Phage_term_sma)
click to view
Estimated TM-score=0.55;
easy target.
>Putative bacteriophage terminase small subunit (Length=174)
MQTQNGGRPTILPKMYEEPLFSQIIDKIESGCNDREIYTSLHCSAKTFRKWRDDNIKAYDEAKGIARGNLLELAESALAS
KLTVRTLKETETIYDADGNVEKVKVKEKELDKDSLVAMMVAKAGNPELYNPTEWRRLQQEESSAHDLKAKIEELDDYKLS
KYETPKIEVPKGFE
5154 PF03387
(Herpes_UL46)
click to view
Estimated TM-score=0.55;
hard target.
>Herpesvirus UL46 protein (Length=434)
CSISQRITSERVRDGCLIPTPGEALETAVKALSEKTDSLTSPVLQSTERHSVLLGLHHNNVPESLVVSCMSNDVHDGFMQ
RYMETIQRCLDDLKLSGDGLWWVYENTYWQYLKYTTGAEVPVTSEKVNKKSKSTVLLFSSVVANKPISRHPFKSKVINSD
YRGICQELREALGAVQKYMYFMRPDDPTNPSPDTRIRVQEIAAYTATGYGWMLWFLDVVDARVCRHLKLQFRRIRGPRAS
VIPDDLLRRHLKTGPAVSAGTGVAFILAATTASALTALLRISVLWRKEEWRDGLNGTAAAIVAAVELITLLHHHFQYLIN
MMLIGYACWGDGGLNDPYILKALRAQGRFLYFAGQLVRTMSTHSWVVLETSTHMWFSRAVAQSILAHGGKPTKYYAQVLA
ASKRYTPLHLRRISEPSSVSDQPYIRFNRLGSPI
5155 PF14996
(RMP)
click to view
Estimated TM-score=0.55;
very hard target.
>Retinal Maintenance (Length=145)
DGLINEIFEEPCFHRNPVKLKSKSSNNTSVRTSIQMLGKRCSPVYLGGSSAPCGIGTNTSQSRTCDQLRCTACDFRVLSF
DDYMWDKSCDYLFFRNNMPEFSKLKAKMIKQKGTRAYACQCSWRDIKELTDLRTDQQLRWVCGKH
5156 PF14319
(Zn_Tnp_IS91)
click to view
Estimated TM-score=0.55;
very hard target.
>Transposase zinc-binding domain (Length=91)
FRDGEARFLSEYGHTLSREQRQVLRAVIRCRTAELGGHLQQCDDCGHQRIQYNSCRNRHCPKCQAMARAAWLEKRESELL
PVPYFHVVFTL
5157 PF06123
(CreD)
click to view
Estimated TM-score=0.55;
very hard target.
>Inner membrane protein CreD (Length=455)
LGIKLGAIALLIVLLLIPLLMIDGLVDERQNYRDEVLRDIARSASYSQQLTGPLVVVPYSRTVRVWRLDKTSQQRVLQER
EVRGRLYFLPETFLLDGQMRTELRHRGIYEARLYHADSRVSGSFVLPANYGIGSDLESYRFDAPLLAVGISDVRGIENAP
KLKVGDELRDFQPGTQSRFLGNGVHAVLPFKASDREQRFDYSFELSLLGSSRLDITPVGRDSQVNLVSDWPHPSFGGEFL
PTERSVSDQGFSARWRTSFFATNLEDQLRACTAPAQADVARAVEAVDPDASRASSAECSEFGQHRFGVALVDPVDQYLKT
DRAVKYALLFIVLTFAGFFLFEVLKRLSVHPIQYALVGMALALFYLLLLSLSEHVGFELAYLISAGACVGLIGFYLCHVL
RSLWRGAGFSVGLAGLYGMLYALLSAEDYALLMGSLLLFGVLGGVMVLTRRLDWY
5158 PF15520
(Ntox10)
click to view
Estimated TM-score=0.55;
hard target.
>Novel toxin 10 (Length=202)
ALSAPTPVNAAVNSAVATGKGVYDLAKDYKGTYNSAKDFAGKLTSKDDKVRDYAAGQAAAHTMSAVLGGMAGKALGSKLP
KPNVDVTNSVPKRVARVVPADVESKTLGRPGSKDVFVVDPNDIKGLNAKGISKKLTIPESPSGFKVIEFNTPRGGSNIGG
IASPYNRNNPGFVNGGVTQGGAKEFVIPNKKIPNNANTRIVE
5159 PF19007
(DUF5736)
click to view
Estimated TM-score=0.55;
very hard target.
>Family of unknown function (DUF5736) (Length=111)
GQCWASVSRWDSETNKMVRRIFAFPGVQPDCESEGETVRSPKEWLHVISWNFECFSAGSVFALDSQRLLAIDVEQKCFAL
ITWPEGQKGVSLQRLTKPGSRKIDHFCVSNT
5160 PF15779
(LRRC37)
click to view
Estimated TM-score=0.55;
very hard target.
>Leucine-rich repeat-containing protein 37 family (Length=69)
KLSPTNNMIPHHPSKPLKNMVTHIPAHKMTVPRQIQEDQGEYTISSNGSFQPLDLEVTLTSGIIPEVKH
5161 PF07128
(DUF1380)
click to view
Estimated TM-score=0.55;
hard target.
>Protein of unknown function (DUF1380) (Length=137)
MYGTCETLCRLLREQYPAETPLNLIIWSPADIEALADGMEYSVSEQDTRAVLARMDAIPEEQRLESGVSAGAVMDLIEQV
KEAVPAVMVPADLLETLLTTAEQALWHREWTARDSNHPVPESVTRRLADAAKVRALL
5162 PF15171
(Spexin)
click to view
Estimated TM-score=0.55;
hard target.
>Neuropeptide secretory protein family, NPQ, spexin (Length=90)
APQRLFERRNWTPQAMLYLKGAQGRRFISDQSRRKDLADRPPPERRSPNPQLLTLPEAAAVLLASLQKLQEAGEENFDQT
RFLEDSLLNW
5163 PF12417
(DUF3669)
click to view
Estimated TM-score=0.55;
hard target.
>Zinc finger protein (Length=65)
MWVLDFDCCRRMTMDEAGIKQACKSFWRNDPYYPRPGSDNQTDRRLWDVFQDRFLEISKRLLEGE
5164 PF12323
(HTH_OrfB_IS605)
click to view
Estimated TM-score=0.55;
hard target.
>Helix-turn-helix domain (Length=45)
MKKAYKFRLYPNKKQQELINKTFGCCRFVYNKYLAKRIDVYKNDK
5165 PF12451
(VPS11_C)
click to view
Estimated TM-score=0.55;
hard target.
>Vacuolar protein sorting protein 11 C terminal (Length=44)
NATIRAIKRAQEENADRHELFKDELERSEDRFGTVADWFGRGVM
5166 PF05667
(DUF812)
click to view
Estimated TM-score=0.55;
hard target.
>Protein of unknown function (DUF812) (Length=609)
MEEVDRILIHSLRQAGTDIDEDVQSVKQFTSELIVEAVVRCLRVIDPAVGNGLSHSLPPGMSARFRLGMSLAQACQDVGF
KGEIGYQTFLYSNEPEIRSLFMFLVERLPRESAEASDQPAGKSVLLQRAIAAQIKAQLSVPWLPPTCRLPVHRKTQSSGP
CHSFHAQPLSLPCSLKVSSRKQPKEVQEYWRNYLLPVTAQPSQPASVPASLLENHISELSAAQEWESEWNSQGLLSRLTP
EEYRSRKKARLQKRIEEQLRTAAQPRPDTHGATRSTSDLAELLQSFGGASTGGDVLTKGTRFTHTEKFTFTQEPEKAVQQ
MAAAASALPSSQQSEEDLKAQQEAELSALQQQLQQLSVQMEEVGGDIKQLTVSIQQVTDELQTREVTNAERENSVKIKRQ
TIDLLPDAENNLLKLQSLVESSSKRVVQLASQWEKHRVPLIDEHRRLKELCSNRESESSRKLSEIKDLHDKIRQSAEEAK
KKESLYKQLLTEFETLSKDVSRSAYTIRILEIVGNIKKQKEEITKILSDTKDLQKEINGLTGKLDRTFAVTDELVFKDAK
KDESVRKSYKYLAALHENCTQLIQTIEDTGTIMREIRDLEEQIETENGK
5167 PF15972
(Unpaired)
click to view
Estimated TM-score=0.55;
hard target.
>Unpaired protein (Length=273)
QKRHNLGNFRQRFQRELNGSITRVDWENTCGGNWTGPEDWVRPAKRCKKRQLVIHALQNHTRSELRSLRAENKDTATTKA
IDISQQRKWALHSGTYKFLPRLNASSHQLNLRHVHRDLQFYVGAFSYLRHAQLHWDYSNTQTESVMSAELGRLRKSARRV
LCSVEVAINATNRLYASKGQKNNRRAVPLLHSKILSRELMEKRLQQFKTPLVQLHHEAALAARSLPAEQPTQSVQLAVDA
RFVKFEYVQYLNNAWKILARQRKQLCRNQRQRQ
5168 PF02705
(K_trans)
click to view
Estimated TM-score=0.55;
easy target.
>K+ potassium transporter (Length=571)
YQSLGVVYGDLGTSPLYVFYNTFPHGAKDREDVIGALSLIIYSLTLVPLLKYVFIVLRANDNGQGGTFALYSLLCRHANL
KIIPNQHRTDEELTTYSRATILERSFAAKTKRWLETHAFNKNSILMLVLVGTCMVIGDGILTPAISVLSAAGGIKVNRPD
VDSGVVVLVAVVILVGLFSLQHYGTDRVGWLFAPIVLLWFLLIGGIGMYNIWNYDSSVLKAFSPIYIYRYLRRGGREGWT
SLGGILLSITGTEALFADLAHFPVSSVQIAFTLVVFPCLLLAYSGQAAYLLLNLDHTKDAFYRSIPEKIYWPVFVVATAA
AIVASQATITATFSIIKQALAHGCFPRVKVVHTSKNFLGQIYIPDMNWILMILCIAVTAGFKNQNQIGNAYGTAVVLVML
VTTLLMILIMLLVWHCHWILVVIFTLTSLVVECTYFSAVLFKVDQGGWAPLVIAGVFFIIMYVWHYGTLKRYEFEMHSKV
SMAWVLGLGPSLGLVRVPGVGLVYTELASGVPHIFSHFITNLPAIHSVVVFVCVKYLPVYTVPEEERFLVKRIGPKNFHM
FRCVARYGYKD
5169 PF06822
(DUF1235)
click to view
Estimated TM-score=0.55;
hard target.
>Protein of unknown function (DUF1235) (Length=265)
MIPFFNGMKIKNRVLELANMNVTNYYDSNHSDIILSEIEHCINEKIYTSNMITIKHYDQHTIRKKTIESVSCNSVKAFVC
IQSAKKGGMLIVFNKITKYKRIIHPNTNCIVLLNSLAEYSISNVNRGTVTIITLDIDIPSMRIIDKKIKNIHYSNSLTLL
NPIKCNEIVFVIKQLLDIHSLSVICEQILINNEWYMIIRCGTNKFYLPSVCLGKILLNFNYVYDNFDKEKIAAIINNNTP
FDLIYPQKSIYRTSIVYEKILYGKI
5170 PF05810
(NinF)
click to view
Estimated TM-score=0.55;
hard target.
>NinF protein (Length=58)
MLNPIQTQAYEHQSIARALCAGCSKQLEPDETHCCEECVAQAIYYRDPNHFMAEDEDE
5171 PF05732
(RepL)
click to view
Estimated TM-score=0.55;
hard target.
>Firmicute plasmid replication protein (RepL) (Length=163)
TTRKKVKVTGTETYINQSTGEIKEMQVIDIEERDFNFHKVWLEHIIHSMDLIGNQKTRLAFWLINNLNRDNVLIMTQRKI
AEKTGISLETVRQTMKALMESGFLIKINSGAYCVNPDAVFKGGKTDRLNVLIQYRKSEQENTKTSEPTSEKDEPSLFNNE
QLK
5172 PF05022
(SRP40_C)
click to view
Estimated TM-score=0.55;
very hard target.
>SRP40, C-terminal domain (Length=74)
PFKRIKDEDVVFLDERLKDNSFMAKGGAIGSYGEKAHRDLIVTRGKGFRNEKNKKKRGSYRGGKIDLESHSIKF
5173 PF13834
(DUF4193)
click to view
Estimated TM-score=0.55;
hard target.
>Domain of unknown function (DUF4193) (Length=99)
MATDYDAPRRTDSDDVSEDSLEELKARRNEAQSAVVDVDESDTAESFELPGADLSGEELSVRVVPKQADEFTCSSCFLVH
HRSRLASEEGGQMICRDCA
5174 PF13220
(DUF4028)
click to view
Estimated TM-score=0.55;
very hard target.
>Protein of unknown function (DUF4028) (Length=65)
MIVKILKDSSNSFLCTVQNKNGDQYVKKWFRKHENNEELGRPTFKEVERDWKENRESFMYPNVKA
5175 PF06102
(RRP36)
click to view
Estimated TM-score=0.55;
hard target.
>rRNA biogenesis protein RRP36 (Length=165)
RANKNRPMEISSKKPVPKFRKAAPVKKKVTRDPRFDDLSGDYREELFSRSYGFLDDIKHREREKVEKSVKKEKNPEKKKE
LQFLLNRMKQQELSDNKKEQQKRIERDWKKKEQTRVKEGKNPFYLKKAERRKLELAEKYKELQKSGKVDAYLGKKRKKTA
QKEKK
5176 PF18939
(DUF5686)
click to view
Estimated TM-score=0.55;
hard target.
>Family of unknown function (DUF5686) (Length=716)
IMRQAIAKREYHLKEVEAYSAHVYIKGLQRLINVPKRVMGIIKVPAGLKPGIIYLSESVSELHFKQPNKMRERMISSKVS
GNSKAFSFNNASDFSINFYKSLIKANGINERGFISPVAGNALLFYNYELMGSAQNNGQLVHRIKVTPKRRHDPVFTGYIY
IVDDSYRIHSLNLFVTKAQQIEFVDTLRITQQFTPAPGNVWVLQSQKFTFDVEGYGFKGNGYFTAVYSKYRVQPASFVKP
SAPAPTVTAPVIEPEKPIAVVVPPAPEKRHKRQPRAKKDQVPANGVPDDAFFKKKEVLAIEENSNKRDSAYWDEIRPVPL
TEEEVSDYHEKDSIQVVKESKPYKDSLDRKNNKLSLADVFLTGYSYRNSFERTSYTVEPITRIWQYNTVEGLVANLRLGY
TKRFEDGRNYSITPTVRYGFSNEKFNAKIASSYQYNLIKRQSVGVEAGRFVSQFNAQDPITPFINTVYTLLAEENWQKLY
QRDYLRLWHQRELVNGLQATFTVDYAQRRMLFNTTDYNWRDRPHKEFTPNEPVNAEVASTAFPEHEALTASVVLSYKPGQ
EYISHPDRKINLGSKWPTITAQYRKGLNGLGGSDVDYDFVSLGVRDELALGLLGTSNYSASIGTFWRKKQMYFMDFKHFE
GNRTLLSGDFSGFQLLDYYRYSTQRTYVEAHYSHHFNGFILNKVPLLRKLKWQEVGSVNYLHTDASGHYLELGVGL
5177 PF03597
(FixS)
click to view
Estimated TM-score=0.55;
hard target.
>Cytochrome oxidase maturation protein cbb3-type (Length=41)
LAYLIPVALFLGALGLGGFLWALRSGQYDDLDGAAERILID
5178 PF11443
(DUF2828)
click to view
Estimated TM-score=0.55;
easy target.
>Domain of unknown function (DUF2828) (Length=695)
TENGDLAYRYTEDALVDLFHELEEVVSGPRLNELLLAAWRENPIATLRIIFNARSIHLGKSSRITLYRCAGWLVQNHPMT
LIANLRWLSRPVIEKKAEKKDDDLVIVEDENKDETTKFDVKNGVAHGYWKDLLNILALAVNKKLGVLDDPKDVLNSENPG
IIRGKSVGKRGGRRGARGASRGRGRVLSGRINTTSETEEKKETAKDPKDLKREARSTRYENAKTIFENDPVYRALHLSIA
RLFAEQLEKDLRALRGEDKKAKRSISFCGKWAPSHDHFHDRHTFIVSTIAEILYPRETIDNEKLKPTDDRETYLRFAREE
YRKDTSALRKHLEIVERAITENKYGDIKYDRVPSLAMNQYNKLFIEKDAERFDKYLDKVAEGKANISGATLLPSTLIHKV
RQGNQGQSRLDQKIAEIESKVLDGQWNTLVQRIKDSGAMDSSIAVCDVSGSMSSPVFSDKTIPMDSAIGLSLLVAEVAKP
PFAGAFITFSSHPSVEKVDLSNTLAQKVSTMDSSNWGMTTNFVSVFEDLILPMATKNNLKNEDMVKRVFVFSDMQFDEAC
DSSGSSWSRPSWSNAPGDEADDGWDTSYERIKAKFEAAGYDMPELVFWNLAGGRAGYGQTSGDPVAPKPVKSDENGTCLV
SGYSQGLLKVFLDGGGFEEEEEEEEVVVEKDAEGNVTQKVKKVKMSPLKIVQKAI
5179 PF07231
(Hs1pro-1_N)
click to view
Estimated TM-score=0.55;
very hard target.
>Hs1pro-1 N-terminus (Length=200)
MVDLDCTAKMVSPDMPKKSPKFSNKLQVSIPSAFRAGDLSSAPSPECSAYEYYLRLSELKKLWDSREFPNWKNESLIRPA
LQALELTFRFVSTVLSDPRPYANRREWKRRLESLTTNQIQLVAILCEEEEEEGEMRGTAPISDLSLSNGVLARDGSCAEV
WKVPGATPVVSRTSEASLLPRLATWPKSEDIAQKIMYSIE
5180 PF14175
(YaaC)
click to view
Estimated TM-score=0.55;
very hard target.
>YaaC-like Protein (Length=307)
LSVFRSADTAQHFLQQCYKQQGRDDAVQRSYTNCYPFLYYLEHGQNFYAAAQQAPLSIKPVLLFYGMVQLLKACLLTVDP
DYPESTSVLAHGVSTRKRKKQGYEFLDDEVKVQKNGLFTHFSEKMFHVKQEAGEKFRMGTLLQRICELHETFFSLNGRKK
PLSLPIVHTASPSMLAIPKTILDHYHMTLPRFVQYIGEEGQGRQLVFMKEEGEFLYFETAMPLSSVGEGPFLFHLNGTYY
IPTKKEKIFTLPEIHAHYLLLYNLSMISRYETEWWSELLHSYSSKAYIFILQFLSVSAEKVPLLLNE
5181 PF15491
(CTC1_2)
click to view
Estimated TM-score=0.55;
easy target.
>CST, telomere maintenance, complex subunit CTC1 (Length=288)
PIPHRVLLAGALSLPASGSPVACRSHCLSLSDPAASASVCCYLLDFDPAAVGREIHVLAWNYLPSLHHGGAGVLEVVRWR
LAEEGTPAPGSGFLKTIPLDCVDDEPDSGTHGHVFGVVRSVSVVFSVPRAGQKSNAGGGDNSVGFIAEMMCCACRRCRVL
PPESDQDHKFELEKFVYFVDSASRWRPVLARMVGRPVSVSGLKKRLVSIDKKGSYTMLVSTRKTMLRWCPSYPAVLKLDG
SPGDCGGVYTGLVTGIYMQCMLVELDETVWLLIDDQHLAPSHSLRVGA
5182 PF04161
(Arv1)
click to view
Estimated TM-score=0.55;
very hard target.
>Arv1-like family (Length=216)
ICIECRYPVKTLYTEYSGADDRSSGHGVRLTVCKNCGRFCDKYVEHDFVVLFIDLVLIKPQVYRHLLHNTLMREHDQFDP
SIIRLGILLLLFDVYLTWARIEKQTSNSANSSSDSNFLLLAQQPIVFQYVFFLILCALSTLAFHLSIRFLTSSPFSPLVL
FGFIPRYPRPNSVSTALLVSSSTKLFPILMVIWEYDVPAAARSLGWAVVANNVEAL
5183 PF07278
(DUF1441)
click to view
Estimated TM-score=0.55;
easy target.
>Protein of unknown function (DUF1441) (Length=149)
KCNISQLAAITGLHRQTVVSRLSGVPLAPGSNEKNKLYLLTDVIRVLMEAPVSQAAEHQDPNKMTPKERKDWFDSEKGRL
WLEKEMKQVVPLPEVRQQMAAIVKAITQVLEVWPDKLERDKGWSADQLNEAQDVVDEVRILLVKAIQET
5184 PF17554
(DUF5466)
click to view
Estimated TM-score=0.55;
hard target.
>Family of unknown function (DUF5466) (Length=57)
MATPIRPLSYSLRRQSNGESRRLSTRVTSVTVCSVRYSVLSFLNTTTVRWKRFVPVV
5185 PF06174
(DUF987)
click to view
Estimated TM-score=0.55;
hard target.
>Protein of unknown function (DUF987) (Length=65)
MKIITRGEAMRIHQQHPTSRLFPFCTGKYRWHGSAEAYTGREVQDIPGVLAVFAERRKDSFGPYV
5186 PF17034
(zinc_ribbon_16)
click to view
Estimated TM-score=0.55;
hard target.
>Zinc-ribbon like family (Length=128)
CNFCRKPIFPFSNRNECNNLPTPIQRGVSKAGPAKHLGKSCPHCGQPLPKCSVCGFSLGDEDVPQKDDFSQKPQNYVKEV
NLQKSRFGLWFSFCLNCGHGAHASHASEWFSTHTICPVPNCDCECKLK
5187 PF12809
(Metallothi_Euk2)
click to view
Estimated TM-score=0.55;
hard target.
>Eukaryotic metallothionein (Length=69)
MTVKKCACKDECCRDSCKCGTDCVPSCSGNEKCRCDHNSESTQCNNCGESCKCGATCTCEKSKCTCEKC
5188 PF05895
(DUF859)
click to view
Estimated TM-score=0.55;
hard target.
>Siphovirus protein of unknown function (DUF859) (Length=633)
MAEFWSNNDRGYRIRLWIDQVSQDKVANTSQVRFQLALLNTTTTFAQYQCNAYIEFEGQRLNWSGSPNMLGWYQTIPLID
QTVTINHDSEGKKTFSFSAQFNGSGGWSPRTLTISGNSFTLTDIPRLSSVSVDAGTIGSPVTININRQSSSFKHTVRYAW
ANKSGTIASNVDTSTTWTIPLDFANDIPNSETGTGTIYVDTYSEGTMIGTQSATLTASVPVSMKPTFTGVSLSDSNTAAR
NVVQNANTFIQIMSNIKVSFNGASGSYGSTITGYHAEIVGKNQTTDFNGGTLGIMNYNGTITVRASVSDSRGRWSDPRDV
SVTVLEYFAPSLSFSVVRTGSTSSTLEIIRNARIAPLIVNGIQKNTMKLTFKVSPYGKDAYTTDTGPASGEWLSISSLVN
SPANLAGEYAANKSWQVLAILEDKFTSTSFKAQVPVESVVLSYDRDGLGIGKIREFGALDVAGDIYANNSPIQQYQLTEN
NGRPKWMDGKPSVENANLLDEPGQYYLDASATGNPNSQWGYLFHYSNYGKNTDDFKEAIQTFWGNNGQLFFRHHRWSKII
DDWEPWKEFARNDNTNLINTGWQYAGYEGSFYKRVGDVLTVRYNFTGNGDTITFATIPKEIFTAPQSYMYVIA
5189 PF15149
(CATSPERB)
click to view
Estimated TM-score=0.55;
very hard target.
>Cation channel sperm-associated protein subunit beta protein family (Length=520)
FNDIHLGKLIHSRKTGTAYIRKILQHNTPEGFLSSVIAEIIDPFGIEEVHESSCLSSSLSVNQAGNFSYKLSLQLQSVTS
SFQDSDIEKTVVIPGYSSFLITRILDNENALAIATMPETVPHNMTFLKGSWFLYNFGQRDGRTWNIHSKPCNYWFQQHDD
SLSLNVLKYIDLGKSHTLKIKVIPNTKGVQTLEIPLLKVVVGNPNLLEVKAEGYFDDADSYLMEISAASKTLRQGSTSLA
FIVWGASTECLVTTFVPTLKSSCSYLKSMHHIPSEIIPLEDWISGVHMDSQGFNMIKVLPINYRPPSNMGIAIPLTDNFY
HADPSKPIPRNLFHKSKKTGKFKQCANVSTREECNCTNDQKFSHAVAFSDCREKVPRFKFPVTQYPISLKIYSEDGHIPV
ETPYLVTVTEVNNRENWNLKHTVPENVKKMKDYLESILHAPVYNPLGLNLSIKGSELFHFRVSVVPGVSFCNLGEEFQIY
VDEAPLPFPGHTLIALAAAVLLGGLIFIAFMFQIRNIHLW
5190 PF18992
(DUF5725)
click to view
Estimated TM-score=0.55;
easy target.
>Family of unknown function (DUF5725) (Length=158)
DRAVVILNPNEPREMFVGGEAKVRLPVWAYKKCVYMVGREQKRPAARLCLCLLQSLFSLRYLVSHNYSGSRQKRPIDPVV
MKAVLRQAMMQFSKGDNVLPGIEFSQGKLRDYLNNAFRVMAFRRRRGDRVKSPFWNDAGEPILSLDPPKDFRLNDIIL
5191 PF09930
(DUF2162)
click to view
Estimated TM-score=0.55;
hard target.
>Predicted transporter (DUF2162) (Length=219)
LTVIGILIGIFIFGIKTGLGCGFSNITTREILTIGGSYFFLALLFGSVADRLSLDAFERLSAMGMGIHVLVSLLLIGAGI
YTQKKWNSGKDVSRHTFLAISMPCPVCLGAIAVSCMLLSQSLNLSGIKIGFLVGIAFFIAVVASSFLFRFGKVRCGKTPE
TMGSAMMLLGIYYLLGALLIPAYMKSKQMNLAPMQTGESGLFPLLAFGIIILAGFFLDR
5192 PF19056
(WD40_2)
click to view
Estimated TM-score=0.55;
easy target.
>WD40 repeated domain (Length=484)
VMMAKQQEFKVECAAYNPEPYLSGETESDSCAMEHGFLWIGSCTNQMGQIAIVSFQSSSPKVIECFNVESRILCMVYIPE
EEKLKEQNKGLNSENVLAKSSNVPTICLGMEEGSISVYKSCQGSKKIRLQHFFTPEKSTVMSLTYMSEYLFAGLVNGNIS
IYTKAEDGTWNTEPQKIVKLGVLPVRSLLVMEETIWAACGGQIFIISTVTHSIESHFEAHQEEGMVISHMAVAGVGIWIA
FTSGSTLRLFHTETLKHLQDINIATPVHNMLPGQQRVSVTSLLVCHGLLLVGTNLGIIVALPVPRLQGIPKVTGRGMVSY
HAHNGPVKFLIMATSINKKNRNKLRNSLPPGSEPKDDDDQKNVLHHERPSSSSLSNTHDTAVWLGGSVGSIAQKSDLSSS
SGSLTLSHGSSSLEHRPEDSNIYELLKDQNISFKSKRQRSKKMKVSSVLVISGGQGHRRVNKKTKQQRQDELVSSVMVWQ
IPLL
5193 PF13966
(zf-RVT)
click to view
Estimated TM-score=0.55;
hard target.
>zinc-binding in reverse transcriptase (Length=77)
FSSARTWNHLHPAGPTVPWYSQIWFKERILKLAFMAWLTVKDRLTTSDRLISWNILVPASCLLCLNGDESRDHLFFH
5194 PF04694
(Corona_3)
click to view
Estimated TM-score=0.55;
easy target.
>Coronavirus ORF3 protein (Length=59)
MDIVKSIDIFVDAVLDELDRAYFAVTLKVEFKTGKLLVCIGFGDTLLEAKDKAYAKLGL
5195 PF14187
(DUF4310)
click to view
Estimated TM-score=0.55;
hard target.
>Domain of unknown function (DUF4310) (Length=208)
NKNFWYADWSFPIFVALLSSGIFAGTHMYYVYKIGAFNDVAIVAMLEAGLQGAGYGAAAAFGASFLFARILEGSLVGILD
IGGSLQTGIGIGVPAILLAAGITAPLENFILALITGALLGVIVGYVIIGIRKFTVNQSNSTFGADIMMGAGNTSGRFLGP
LIVISAASASIPIGIGSIIGAAIFYVWKKPVAGGAILGAMIFGAIFPI
5196 PF17341
(DUF5371)
click to view
Estimated TM-score=0.55;
hard target.
>Family of unknown function (DUF5371) (Length=65)
MVKIVHAQTVLTEEELAALKKKCNEPSTKEALSIAVQHYLECEYTDLGDKMWTKKLERVVQKKKS
5197 PF07219
(HemY_N)
click to view
Estimated TM-score=0.55;
easy target.
>HemY protein N-terminus (Length=107)
GYVLIQTAGYNIEMSITMLVVFFVILMAVVYLIEWVITRFFRLSSNTYSWFSRRKRLKAQRQTLEGLVKMNEGDYSKAEK
LIGKNAKHSDEPVLNLIKAAEAAQNRG
5198 PF10827
(DUF2552)
click to view
Estimated TM-score=0.55;
easy target.
>Protein of unknown function (DUF2552) (Length=79)
MEQKLKAMKNTAQNKTWVSFLNQNHPYTLLHWSIGGAESVKKDVWLLQDEMTFETQEFTTIDLAIEWIREHMDDITDVL
5199 PF14510
(ABC_trans_N)
click to view
Estimated TM-score=0.55;
very hard target.
>ABC-transporter N-terminal (Length=87)
LARSLSQLSSKSSTGEGTNTFLDPTSDPELDPNSDQFNSRKWTKNLLRITSRDPDRYPRRTAGVSFRNLNVFGYGTAADY
QTNVANM
5200 PF14105
(DUF4278)
click to view
Estimated TM-score=0.55;
hard target.
>Domain of unknown function (DUF4278) (Length=57)
MQLTYRGIPYNYTAPEVETPPVKTVGKYRGLDWRFHTDNKTVVQQPTVELKYRGVAY

Search by Pfam ID:
Go to page (83 pages in total): [First page] << < 47 48 49 50 51 52 53 54 55 56 57 > >> [Last page] [All entries in one page].

Bulk download:

[Back to server]

[an error occurred while processing this directive]

yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218