Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●C-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●COACH ●COFACTOR ●MetaGO ●MUSTER ●CEthreader ●SEGMER ●FG-MD ●ModRefiner ●REMO ●DEMO ●SPRING ●COTH ●Threpp ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●GPCR-I-TASSER ●MAGELLAN ●BindProf ●BindProfX ●SSIPe ●ResQ ●IonCom ●STRUM ●DAMpred

●TM-score ●TM-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

[Back to server]

Modeling of Pfam protein domain faimilies by D-I-TASSER (Page 31)

Search by Pfam ID:

Go to page (83 pages in total): [First page] << < 26 27 28 29 30 31 32 33 34 35 36 > >> [Last page] [All entries in one page].

# Pfam ID D-I-TASSER models ranked
by estimated TM-score
(click to view)		 Full name and representative sequence
3001 PF13886
(DUF4203)
 click to view
Estimated TM-score=0.69;
hard target.		 >Domain of unknown function (DUF4203) (Length=198)
VIAGVAIGIGLTITFFGYRLIRPCIFVTGFIIGSVVFFLAAESIFSNSDSIEVICWVAFAIGGLLVGFLLVWLYYVGIFA
LGALSGVLLATQFHNSFGYLIYPSHPNVVLYILMGVFGLTLGLIALKIERPFLVFATSCIGAIAAVWGIGFFAGGYPNTA
YLQNTYSNGHWDYDIPTNWWYYLAGMVVLCILGMIVQF
3002 PF17453
(Sigma_M_inh)
 click to view
Estimated TM-score=0.69;
hard target.		 >Sigma-M inhibitor (Length=96)
MELVRIFKEHNVFGWISVGTAILSLLLLNLAIISNVTFYSYQMLPFAMAAVPFGVIELFIKRGRTGPGLLGVILNLFVII
CVYTIVSVDTNLQFGF
3003 PF16287
(DUF4933)
 click to view
Estimated TM-score=0.69;
easy target.		 >Domain of unknown function (DUF4933) (Length=384)
SDEYPEGYVPVPGIRYQANYLTGNPERLDVKAALRNVRPLKLSQLGSQLDFMVFKDVKGGIFRLIPIEEGCLGVGIGGIW
LLDGNLKMIRMLFRNDVDITEENGFTNFQTKRYINPDYYEKSSRTLIGVLYDQRDKKNPKSFVRLSLKDLLSASRPLTPD
DIHKRAGISGNYLLGMADGYATWTRFTNDVYTFNLRGDTLCHFTIGEKVNYPPRGNGSYRSGEQATVYHYKGCPMIIMPY
GNTVYRMKDASTLEPVYELDFGTLHRATGEEVVGGADVDNAYFLSDWVETDSYVFMHVEKGYDCPYARDKKQVTLYSLIY
DKRSKAFFSLPQAEKTVHPCPEPDLPDGIPFWPRKGFSEEQLATFTTGWKLSKSSPEVFKRIPA
3004 PF06699
(PIG-F)
 click to view
Estimated TM-score=0.69;
very hard target.		 >GPI biosynthesis protein family Pig-F (Length=196)
IHPLLVLSVYGLKFNALVADPVSTLFSTLPYLAVLQIAFVAVCLPPTGGAPKKPTEKKAKAPGKPEQGGNSKLVPAFLSL
LLALIAATPLLTATLVLFGAPVSSHYWHTLLCGAHIALLSTLPLVYVHGVDGETWRQIVALLLPIDEVYGGLIGTVLGAW
LGAVPIPLDWDREWQKWPVTIVTGAYIGYAVGKLLG
3005 PF01682
(DB)
 click to view
Estimated TM-score=0.69;
hard target.		 >DB module (Length=94)
CCTAQNVSSKCMGYCTVHNILDGTTGIDPEACEVDFPSIVKCMADGRNHMPCCEKRGVPDLCQDMCRGEYTPFTDLLKSR
VSCAAHTLPALQCI
3006 PF09717
(CPW_WPC)
 click to view
Estimated TM-score=0.69;
hard target.		 >Plasmodium falciparum domain of unknown function (CPW_WPC) (Length=59)
CEINYSEMCPEGWVNLGDGVHCISPVHYNGPCEKKVSFKNATPRSKYNFSTRCNVSWPC
3007 PF19163
(DUF5845)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Family of unknown function (DUF5845) (Length=81)
LVLIGYGDITPYRNSKPFSAKTLYVTKCDKNFIYYWIHKNKFPNLEILYMDSHPCDPSFFCIDVSKIYLSDNYKHYNDRW
G
3008 PF11130
(TraC_F_IV)
 click to view
Estimated TM-score=0.69;
very hard target.		 >TraC protein (Length=248)
QFANWLPYSAYLAAEKIFVNRDSMGVMLELMPQSGADERMAEVLISLYANCPPGTGIQFHLFASPQVRSQLRQYANLRVE
DEDQAEQAKQWGRPARNGNLFRKLARQRVEHLLQGAQKSLTAGFHYTIRDFRLMLSVAFPGDPEDLNKRDELLALRDSMS
SSLRSASLPNRVCDAADLINWCALFTNPDRISQTDAPDLNYDDGRELRDQIVDFDTIQDPHPSGLTLWKEASPDVLEARF
YSIKSFPE
3009 PF06149
(DUF969)
 click to view
Estimated TM-score=0.69;
easy target.		 >Protein of unknown function (DUF969) (Length=216)
MWVLIGIPIVVLGFALRFNPLLVVTIAGISTGLAGGMQTVEIISAFGKAFTDNRYMGLIWLTLPVIALLERNGLKEQAKH
LISKIHVATTGRILMLYFFLRQMTAALGLNSLGGHAQMVRPLIAPMAEAAATTKYGDLPNDVRQKIRAHSAAADNVAVFF
GEDIFIAVQSILLIKGFLDQYGIDVEPLHLSVWAIPTAIAALIIHFIRLWLLDRSL
3010 PF13265
(DUF4056)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Protein of unknown function (DUF4056) (Length=261)
PIEPPEGLRACCAFGYDLKTEVVGIPVPFYDIDNIVEAEKLGEHHYNDSALGASAALLGISNEKIGLLYTQKGGFIDISH
VRDTADYTLYLFSQIYAHLGQERKLSLSNELAARKIHFFAFTPPVDPVERYTLSAYLAAKLAFQLAAWHEIAQWYGYQSV
PGFPEGISAFSPEDLYSNLLGARLALTLILQGHASSVTQFTTSMAAILPSALHKLEPYSKSDTKKMFNQVDGLWWNSHER
IPQKFLVLRRNYEIQDNRYPL
3011 PF12760
(Zn_Tnp_IS1595)
 click to view
Estimated TM-score=0.69;
hard target.		 >Transposase zinc-ribbon domain (Length=47)
PDEEACREYFEKRRWGNTPVCPHCGNAQKVYRYKNRRTFKCAHCKRQ
3012 PF09436
(DUF2016)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Domain of unknown function (DUF2016) (Length=72)
ADAALQQSFPSVMVPRFGALAPMERSGERLLIAANGVFLEIVRPWLSVVRHLGAFQHRTAIPYGEAAETTDL
3013 PF08900
(DUF1845)
 click to view
Estimated TM-score=0.69;
easy target.		 >Domain of unknown function (DUF1845) (Length=218)
RVGALKSALTIELHTHYAIRLWEGRKKEDITGRRQYPDIIGMPQVIKRAGTISVDAAADNPYADSWLIKLEQALVTASAS
LQQSIATLQEILNALPAQITLSSVSSVEPLNIGVYSHSPLGYRCVWLLVGYDQLAMKTFQAFHYGFISRSERDTLLHNGS
RVIRQIYGLVRSYRPLKVTRADIEEKTPAGLEAIKWLGEPDPDILSGRLRSDFSPPLR
3014 PF16185
(MTABC_N)
 click to view
Estimated TM-score=0.69;
hard target.		 >Mitochondrial ABC-transporter N-terminal five TM region (Length=243)
SYCEANSSISHTWVDEGISPCFYFTLVPAILLTISFFLGTIHCICYQKYGTAMEPKFIPRSRLYGFQLALSVLLVVQFLG
GIVWQATTGGELPGYVVLYGCFSVLAWAWAISLLRVERRRVLVMDRTRGHSTFLLLFWALAFSAENLAFVSWYSPHWWWA
LENNKQQVQFALWLIRYICTGLLFFIGLKAPGLPRRPYMLLINEDERDVENSGQSLLGRTEENQSTWKGFRQKVRLLVPY
MWP
3015 PF08417
(PaO)
 click to view
Estimated TM-score=0.69;
easy target.		 >Pheophorbide a oxygenase (Length=83)
FIAPCIFHAFTVDQVGKSEGFYDFFCVPVSPGHSRLIWSNPRNFGVWIDKIVPRWFSHIGLNLILDSDLYLLHVQERKIE
NIG
3016 PF18744
(SNAD1)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Secreted Novel AID/APOBEC-like Deaminase 1 (Length=207)
PAALRVIVDYVNWPLTLGTVQYAFVVSLPRETCNQPTNLQEQLPEEVLNAMNQALARQGGQYTPNDGPIVAARPRHRKTR
WQHSEWRLLHGEENSWVAQLKARTCRPTCCLILFTLNSPCTSMCLAENGPYNILSMTRAAFSDIDNNYQAFVFQRIFRND
TWPLVTRQELLEAWHRLHDVPLLRCDNNGCQDCAATDPENNPCLAGK
3017 PF00819
(Myotoxins)
 click to view
Estimated TM-score=0.69;
trivial target.		 >Myotoxin, crotamine (Length=43)
YKRCHKKEGHCFPKTVICLPPSSDFGKMDCRWKWKCCKKGSVN
3018 PF14455
(Metal_CEHH)
 click to view
Estimated TM-score=0.69;
easy target.		 >Predicted metal binding domain (Length=177)
VDPKVSRAKFDREISRFRAYADAYRMQGCFLIEESFPSAFFIFASPKVKPRVIGAAIEIDFTNYDLRPLSVVFVDPFTRQ
PIARKDLPLNMLRRPQLPGTPTEMISNLIQQNAVSLTDFIQANSLEDQPFLCMAGVREYHDNPAHSGDPWLLHRGSGEGC
LAFILDKIIKYGTGPAE
3019 PF06279
(DUF1033)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Protein of unknown function (DUF1033) (Length=118)
MYRVIEMYGDFEPWWFLEGWEEDIVASKKFDQYYDALKYYKTCWFRLEQESPLYKSRSDLMTIFWDPEDQRWCDECDDYL
QQYHSLALLQDEQVIPDEKLRPGYEKQTGQERHRSCRM
3020 PF16409
(DUF5017)
 click to view
Estimated TM-score=0.69;
easy target.		 >Domain of unknown function (DUF5017) (Length=179)
SCMEDEAPSVELNVALDKQVYQVGEPVTFKLNGNPDNIVFYSGEVGHNYAYKERYHADGDLLVKFNSWVRYGDIYHNLKF
LVSSDFSGIYDKENVEAATWIDLSDKFRFSVGDDQTPSGEVNLKEYVGAEEDAKLFVAFRYEDEQKARQNNWIIRSITLD
CVSAEGVRSNLATMSTMGW
3021 PF11079
(YqhG)
 click to view
Estimated TM-score=0.69;
easy target.		 >Bacterial protein YqhG of unknown function (Length=259)
MQQHEIHQFLERYFRANECDILEADDGYIKVQLSIEMDKELMNRPFYWHYIERTGGTPAPMQLTLITKQTEKTNSLEGER
LHFGSPRLHQIFRSAQKRGGFIRLYEEVDTYQQSHIPLHPWLGLNVKISYQCDRTKDQILSLGLHLISGTIIEQFHDRLQ
KLKLTPKIPDYCFTISPLIKPKSGIGRLEQYIRRHIFQDDHTWAEKAKERWAEDLALLDHFYEGMEEKPECYYIEKEALE
EQYKPRIIVSVINGGLFYL
3022 PF14985
(TM140)
 click to view
Estimated TM-score=0.69;
easy target.		 >TM140 protein family (Length=176)
LWGNHLSFVGIMILTVVVISLLFYALLWKAGNLADLPDLRIGFYNFCLWNEDTGSLQCHHFPELEAWGVSQIGLALARLG
VYGALVLTLFVPLPLLLAWCNGDKGEWQLAVGFLAMSSVLLAGGLGLFLSYVWKWVSLSVLGPGFLALGLAQVLLILLLM
ATVMFPPRAKKDKCQL
3023 PF12828
(PXB)
 click to view
Estimated TM-score=0.69;
hard target.		 >PX-associated (Length=124)
QTLTGKQEHYLKRELISDQVKFEISELNSPTALKRFGAPFKSDYGEVSPLESELPILRYIFVHHVRDFPFLDKAREKEFW
QDKLQVFLESFAMKNISSSEDRLEETKRRKLALKSQKLVELMMV
3024 PF17347
(DUF5377)
 click to view
Estimated TM-score=0.69;
hard target.		 >Family of unknown function (DUF5377) (Length=95)
MTVQTEVLFSNNWNVRISDPGEEGAHSHFFETIYITLVAHIDGSNISYEFTRKVEEQVKIHRTFTDLSELFKFLGDYLDP
VSMGFLGIKIGNLGV
3025 PF10844
(DUF2577)
 click to view
Estimated TM-score=0.69;
hard target.		 >Protein of unknown function (DUF2577) (Length=106)
IKSAAMGAVNDSKPMSVLFGKVVSTSPVKIFVEQKLTLNEAQLIFTNNVRDYDLEMTVEHFTEESNSHVHPYKGKKKFRV
HNGLAAGDEVIMLQMQGGQKFVVLDK
3026 PF06906
(DUF1272)
 click to view
Estimated TM-score=0.69;
easy target.		 >Protein of unknown function (DUF1272) (Length=57)
MLELRPNCECCDKDLPPDSTQAMICSFECTFCQDCADQRLHGTCPNCGGELVRRPIR
3027 PF14485
(DUF4431)
 click to view
Estimated TM-score=0.69;
easy target.		 >Domain of unknown function (DUF4431) (Length=47)
MQLVVQSEFYNEYRSLVGHRVSVTGTIMYARSGHHHTPIMLETQRIE
3028 PF12825
(DUF3818)
 click to view
Estimated TM-score=0.69;
hard target.		 >Domain of unknown function in PX-proteins (DUF3818) (Length=342)
GLTHVFGTIKDTPNIRDLPSNYQAVTEWARISLASTVFQQFVASDSASETFAGLKRIHGLMPYFMLKAALKISNPIGMIR
SVLDLFLAQPFGGKSLLQRMFTSSLTEEVKQLQEEIEAVKDKVDDPIMCEKIQQFVYAPREIQEMFKADSVVEKMNIFLI
ILRSSEQPGLSKPQMIRLARAHKAHAQYMKYRESLEDSDDDDGPQDEDAWLLEDLKILAFLYTRLRDREMLIDLIFEGFT
AELLKDIITIFYSPLAQVYRAASIADSLNDLQNFINDLIRTVEQVEEMIQDNPHHTVQAFIDLIQRHEQSFYYFVHKVHS
KGEGLFNSLMQWIEMFLTVVRE
3029 PF10261
(Scs3p)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Inositol phospholipid synthesis and fat-storage-inducing TM (Length=245)
PSYFARKDNLVNVLFVKRGWAWVSAAFAAFVLTHPHHTKNTTTGRGGGQQGGSSSRRLRAVLRWALVTGWWVLVTQWCFG
PPLIDRGFRYTGGKCEEAEQKVRGADNYAASPVDIFSAAACRTAGGRWRGGHDISGHVFLLVLGSFFLLQEAGWVAVRAW
EGASGGGGRRDSRAVVMPDGAVKGVDVEADGRREDPSELGFGGRFVAGVVGLSMWMLLMTAIYFHTWFEKLTGLLVALIG
LYGVY
3030 PF14217
(DUF4327)
 click to view
Estimated TM-score=0.69;
hard target.		 >Domain of unknown function (DUF4327) (Length=67)
YSLDVIQDEARQLVEKGVISRQQPIYTLCQYIPPREWVCVECELEKCDFLLRDRIADLIGREEWDND
3031 PF10924
(DUF2711)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Protein of unknown function (DUF2711) (Length=216)
DKSPILEQLPRNFKSAAILLHPFIQMPLGWEKSVRKRPYEHIYPSAEEIIYNGKSVSWKEMMSCSGLHSYADLAMAMLTS
ISALSEEYKREDLAEKLHSNLKKDLYYPTEDYTSIFLLHKLLKLLGSKGAKNLYFSEPILDTNGLLQVNNTTPLDIWDIS
NNELIITGEDNEYAFMSIYDSFTTLLLAKEENIEYIVHSMNVEAIICDKKTMIDWY
3032 PF05655
(AvrD)
 click to view
Estimated TM-score=0.69;
hard target.		 >Pseudomonas avirulence D protein (AvrD) (Length=329)
LFHRSVDDVLGPRERRFFGEGFKRAEHRLRHIFVTYGPEGRAQADARVSVDYPSDWSRKGDADQRPHLSTVDVLVIGVQL
SEVHLAHVLGLSPDQRARAVLQRVRIKAGRSPVEEDLAGFAASAQLVATVPSDRVVGLFLSTVECVVGTLRMRCEIRHEA
GVPHQAAGSYDSLRGLLGDPRLRLFGEGFTSRRQLVEDVVIDPQARQAAAAVRVIRDEDAPSPATGLEGAHHDRASAIDA
FVIGLQLGQVLLYTLDDVPRAQSNTLWMRETILELDPLRPPLPATAPVTTRLDRCKRLETGKGDIWRSADIVGEFLGVRL
RCSVAHRLP
3033 PF02601
(Exonuc_VII_L)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Exonuclease VII, large subunit (Length=314)
LFAEAHKRPLPALPRRIGVITSPTGAAIRDILSVLGRRFPAVPVLVYPVAVQGAEAAPEIVAALERANRRAECDVLILAR
GGGSLEDLWAFNDERVARAIHASRIPVVSAVGHEIDFTIADFVADRRAPTPSAAAELVVPDRRAWLDRLRGLEARLHQRL
RDHLHRSTERLAALEARLQRQHPGRRIRQHLQRLDELAARLQRAMRLALHRRRQRLETLEARLHRFSPLPRLQHERQRVE
ALRHRLHQALRQRLQQARQRCSTLARQLHTVSPLATLDRGYAIVTDAQGHVLQCATEVAPGTRVTARLARGRLH
3034 PF10876
(Phage_TAC_9)
 click to view
Estimated TM-score=0.69;
hard target.		 >Phage tail assembly chaperone protein, TAC (Length=133)
FEIEGLTYVMTPANAMAAWQSLKRAGVLLRGMDADALANAQGAASVALGTLLSHLGDPAVTEIEALVFEQTAIKTPEGTT
YRLSPDRLNEHFNTRRTHLLRVLMEGVKYQYSDFFVGGMAAFQDLIPMPSAEQ
3035 PF10721
(DUF2514)
 click to view
Estimated TM-score=0.69;
hard target.		 >Protein of unknown function (DUF2514) (Length=160)
WKVLAIVAVLISCWVWGFNHGSNKVEADWQQKWDRELKTQSQAVASTTTEYRTEEQRRQKAANQVANDARQEQAVAIADA
VVADASGDRLRSEAGKLAASASCVPSDPGIADRGKNAARAAMVLSDLLSRADSRAGELARHADRLTVALQACNASYIGVT
3036 PF03206
(NifW)
 click to view
Estimated TM-score=0.69;
hard target.		 >Nitrogen fixation protein NifW (Length=99)
TLEEFKKLVDAEEFLQFFNLPYDQQFVNVNRLHILKKFSQYIREVDDNSPDLSPEERLNQYSLALQKAYQVFIESTPHEQ
KLFKVFNDKPKNVVTLTEL
3037 PF11212
(DUF2999)
 click to view
Estimated TM-score=0.69;
easy target.		 >Protein of unknown function (DUF2999) (Length=82)
MNPIIQTLKEHNVSDEKITEVFQALTQNPLAAMATIQSLGIPQEKLQPLMMQVMTNPSLIKEAVEELGLDFSKVEEAKAK
LE
3038 PF12890
(DHOase)
 click to view
Estimated TM-score=0.69;
easy target.		 >Dihydro-orotase-like (Length=139)
KQLFFILIAFFTVAVPAVAQQLKTTRWDSYGVSFKAPADLVVEDDSSEGYIAGNDTYYLTIQLLEGEGLKKEELGQELKA
IATDDEVTSQSSVQSFELPQFHGVQLKGNCEEEKCVYSYLLAKDGSCGFYVSIVYRQEN
3039 PF09430
(DUF2012)
 click to view
Estimated TM-score=0.69;
easy target.		 >Protein of unknown function (DUF2012) (Length=111)
QQNWAADSRVLLNHGEYIGFVREDGSFIIDNVASGSYIVQVENVHFVFEPIRVDITAKGKIRARKLSVLQPNVVNQLPYP
LKLSAREPTKYFRKREEWRITDILMNPMVLM
3040 PF03087
(DUF241)
 click to view
Estimated TM-score=0.69;
hard target.		 >Arabidopsis protein of unknown function (Length=231)
GLCMLADLHIFLEDLLNMPSTQKMMSNHQGEKCMEELLDGSVRILDVCGITRDTMLQIKENVQSLHSALRRRKGDSSIEK
IIAEYNFFSKKMKKNAKKLITSLKQMESKFGVSPLLNQDQQLAALVRVLREVIVMNMSILQSLLTFLVVPASKSKATKWL
LVAKLMNKGVIACEENQKNFNELQSVEASLSTLLSEGTNVAKMQTAHERLEALENGIQSIENGLESVFRRM
3041 PF03627
(PapG_N)
 click to view
Estimated TM-score=0.69;
trivial target.		 >PapG carbohydrate binding domain (Length=226)
MKKWFPAFLFLSLSGGNDALAGWHNVMFYAFNDYLTKNAGNVKVIDQPQLYIPWNTGSATATYSSCSGPEFASGVYFQEY
LAWMVVPKHVYTNEGFNIFLDVQSKYGWSMENENDKDFYFFVNGYEWDTWTNNGARICFYPGNMKQLNNKFNDLVFRVLL
PVDLPKGHYNFPVRYIRGIQHHYYDLWRDHYKMPYDQIKQLPATNTLMLSFDNVGGCQPSTQVLNI
3042 PF09534
(Trp_oprn_chp)
 click to view
Estimated TM-score=0.69;
hard target.		 >Tryptophan-associated transmembrane protein (Trp_oprn_chp) (Length=185)
LCGALGAALVLLATSRKWAEGTASVAQSSLPQSANGDDITGLPGALAVVGLAALVAVFAVRRVGRIVVSLLLALSGTGIV
ISAALGATDKAALKEKASKVTGVEGSAIHDVSYTPWPWVALAGGVLLLFAGVLALAYGRHWPAMSGRYERAGAEGRRPAR
RASAAPDPDRPEELWKALDRGEDPT
3043 PF15613
(WSD)
 click to view
Estimated TM-score=0.69;
hard target.		 >Williams-Beuren syndrome DDT (WSD), D-TOX E motif (Length=99)
NIFPLGRDRIYRRYWIFPSIPGLFIEEDYSGLTEDMLLPRPSSFQNNVQSQDPQLPKPVHKPNRWCFYSSCEQLDQLIEA
LNSRGHRESALKETLLQEK
3044 PF11374
(DUF3176)
 click to view
Estimated TM-score=0.69;
hard target.		 >Protein of unknown function (DUF3176) (Length=104)
AIYLRINGSSLSSSGTALTFANILGKISSAALIIPTSEALGQLKWNWFNNSKAMWDFEIFDKASRGPWGAALLLFRTKGR
SLAALGALLIVLLLAIDTFFQQII
3045 PF08471
(Ribonuc_red_2_N)
 click to view
Estimated TM-score=0.69;
easy target.		 >Class II vitamin B12-dependent ribonucleotide reductase (Length=101)
DGSKVFEMNDVEVPKQWSQVAADILAQKYFRKTGVPQADEKGKPVLDENGKQVTGSEHSVRQVVHRLVGCWKEWGEKHKY
FDTPEDAQAFYDEVAFMLLAQ
3046 PF17090
(Ytca)
 click to view
Estimated TM-score=0.69;
easy target.		 >Uncharacterised protein family (Length=64)
APNIDIIGSFFPVWMLCLAIAIALSFVVRVFLVRLKMESEVGPLALFYPCSVIFFTSLMWLIFF
3047 PF18796
(LPD1)
 click to view
Estimated TM-score=0.69;
hard target.		 >Large polyvalent protein-associated domain 1 (Length=71)
DKKTKGYYFSKPEEMCARAFEAFVQDAPIKNNFLVKGTKQSEEAKLGLYPQGEHRLRINAAFKQYFHTLGH
3048 PF09446
(VMA21)
 click to view
Estimated TM-score=0.69;
hard target.		 >VMA21-like domain (Length=63)
AIKNLIRFTAAMFVLPLLTMFTTYHYIFRDYFHLPPDQAMLYAGMCGVAVVFIIIIVFIYVAY
3049 PF11824
(DUF3344)
 click to view
Estimated TM-score=0.69;
hard target.		 >Protein of unknown function (DUF3344) (Length=278)
YKGKGLYEYNGTDINTEHIYDIRGGIVYYTQPDSAYKAVGWTERTETWTTTDLSVPSTGTIEDVWLYLAYNWDYTADGNP
NWTIYFNGIDITNSALAWYTDQSNFGGYAYYKYGLMVFNVTSLYDRNGDNNLTMTALDGNLNALYPSTLTVIYSDPNETR
KQIFIGEQCDELGLSESSYGTTPEEATAYANFTGMTIDTSNMSSATLHSFAGSAGPDEGNLFFNGNTIASLAWQGSSNSA
SSLVADVTSYITNTGNVAAIQATTSGGMDTLQQFLIVE
3050 PF14257
(DUF4349)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Domain of unknown function (DUF4349) (Length=217)
RKLIKTVNMDVETREYDKLLSAVENKVTELGGYIESLDAYNGSTYYSYRSTRNANLTIRIPKDRLEEFQNTVSELGNVTS
RSENVQDVTLTYVDLQSHRDALRTEQERLLQLLEQAESVEDIITIEQRLSDVRYQLESMESQLRSYDNRVDYSTVYLYID
EVEVYTPVEEETVWERISTGFVDSLKNIGEGLKEAAIWFVIHIPYLVIWAIVIAVIV
3051 PF12419
(DUF3670)
 click to view
Estimated TM-score=0.69;
very hard target.		 >SNF2 Helicase protein (Length=135)
RPCGLGLDADGAYHFLAAAAPALDQAGFGVLLPSWWDKQARLGLTMSASTPVDGVVDKASKFGRDQLMEFRWQLAVGDDT
LTEEEIAALAATKAPLVRLRGQWVAVDPEQLRRGLEFLTRHRDGQATAGEILRLA
3052 PF14234
(DUF4336)
 click to view
Estimated TM-score=0.69;
easy target.		 >Domain of unknown function (DUF4336) (Length=321)
KDTVWTFDQLQGIFYVVVPVRMTVVKLQGGGLLVYAPVAPTRECIRLVKELVEQHGNVKYIILPTISGIEHKVFVGPFAR
YFANAQVFVAPNQWSFPLNLPLSWLGLPPKRTSLLPEDSRQTPFADEFDYAILGPVELGPGRFEEVAFFHRRSHTLLVTD
SVVSVPEEPPAIVQLDPYPLLFHAKDNASDIVEDNQANRRKGWQRISLFALYFQPSVLEIPTWSEVFRNALKAPERSKKA
YFGLFPFQWQEDWKRSFDALRGNGRLFVAPILQTLILNRAPKETIDWADKVASWDFQWIIPCHFDSPIQAQPHQFRQAFS
F
3053 PF07356
(DUF1481)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Protein of unknown function (DUF1481) (Length=186)
ASGYIADNGVVRLWRQDNAQQQPQVLMSVYSPYSGDNTRVTFYEYQNGLLREIRRNDLGREPQSVELRFDEQGQVSFMQR
QLATRREQLSADNIAVYQLDAKRILELSSVLRAGNVRLIQGRWQDGVVTTCAGKKLRLSLDEKSQAWLSKRGENSTQPLG
IAWLDSPEGQQLLLVANQDFCRWEPT
3054 PF14333
(DUF4389)
 click to view
Estimated TM-score=0.69;
hard target.		 >Domain of unknown function (DUF4389) (Length=75)
ANTWIRGAWMLLFIIVYEIAAFVIGLLAIVQFVLLLTAGTPHSTLLSFSQRLNAYVYQIINYLIYATEERPFPFS
3055 PF06039
(Mqo)
 click to view
Estimated TM-score=0.69;
easy target.		 >Malate:quinone oxidoreductase (Mqo) (Length=486)
DVVLIGAGIMSATLGTLLKELQPELTIEIFERLDMAAAESSDAWNNAGTGHSAFCELNYTPQKQDGSVDIKKAVNIAEQF
EVSRQFWAYLVENNIISNPQAFIQSIPHMSFVWGEENVDYLKKRYKALQQCHLFKKMEYSEDQEQLKAWMPLVMEGRDPN
QKVAATHMEIGTDVNFGALSRALFNHLEQLDGVNIHFNHDVRDLKKADDGGWIIKVKDRETREKQTIKASFVFIGAGGGS
LPLLEKSDIPEGKGFGGFPVSGQWLRCTNPDIIAQHQAKVYGKASVGAPPMSVPHLDTRMIDGERALLFGPYAGFSTKFL
KNGSIFDLPKSIKVDNIHPMVSAGLDNIPLTKYLIAQVRQKPEDRLEALREYYPEARMEDWKLEIAGQRVQVIKKDPEHG
GILEFGTEVVSAADGSIAALLGASPGASTAVSIMLNLLKRCFKDYVETEAWQRKLKQMIPSYGQSLLNNPQHCDELRDWT
TSVLEL
3056 PF17393
(DUF5402)
 click to view
Estimated TM-score=0.69;
hard target.		 >Family of unknown function (DUF5402) (Length=120)
AEKLLEDRKKLEERLRRLTGGANVFVSEADLFAMSCGCIGIISYIQGMQFEDVEIYHEELMNIIEELSLDLGIYPSVSYA
QMKPGTFDLERLQAHDLCDNCQKEYAGVGGKPWPDILIFK
3057 PF06894
(Phage_TAC_2)
 click to view
Estimated TM-score=0.69;
easy target.		 >Bacteriophage lambda tail assembly chaperone, TAC, protein G (Length=118)
MFLKTEQFEHNGVTVTLSELSALQRIEHLALMKRQAEQAESDSNRKFTVEDAIRTGAFVVAMSLWHNHPQKTKQPSMNEA
VKQIEQEVLTTWPTQAIYHAENVVYRLSGMSEFVVRQA
3058 PF09357
(RteC)
 click to view
Estimated TM-score=0.69;
very hard target.		 >RteC protein (Length=218)
FFKNIKPRFTSKLIYYNAIFKIETKKPHGGERILKKYLNNELDKLKRYFDNNLDFYKYYRTGSNYLDHKYFTRGKFDIKL
ALDSFYFEVDHSFSTSHDFKVAKIMAHDLIQVYLEDKLLMMENREPKEKSQGNPKVKQTWTGSKVALIELLYALHTEGVF
NNGASDLKDVAEYFENIFNIDLGQYHRAFLEIRMRKSDQTKFLNSLKEKLVKRMENTD
3059 PF17239
(DUF5312)
 click to view
Estimated TM-score=0.69;
hard target.		 >Family of unknown function (DUF5312) (Length=553)
STFDKLVETLSGEEAQQMLAKIKQAINTNEELQIAPSSTKSEILKSDFTESRLENEPFLFRLWLTLKAFFKSLPVESLYE
TSLLNRLGRALHAKYKDYINIRENSFKKGFYDGLKSLRKTQVFFDSLLTAYDNDKGDFYLLLSSFIAPEAHKKLMEESDP
FTVQIGTESSANLRSDFLRRIDNAFSVLTDDNKSQLYRAAQAIEWMKSFCDIPIEKMLLHFTISSDTEAVCPVTLVQSEL
EKLACVLCYLKQIPEPVLQGLFFLKAQNKFENGTSDNSNAAVEFLEQAAIALSAVKKFAEAIPIVDFTRFCLKDLHWHPY
SVAGAEEWFILFKNAWKKRFNEKWSLWTAEQKRFALKGQMLALLKKDHFEEMQYKPWEDIWYPLVFKRELSFVFLKNFFN
SLYPSSIQPPLKIILVEGSFYRRENLAEFSEAFNALGQMKLKIAGFEEKLAPAGEIGGGFNAQKKEPVATIKNKETLETL
IRTVDSEASILIESALNAFKSIDTILTGIVGGSKASIYATLVNWGAIQGNSNSAFRKNVEEAKRRLQTAAGLL
3060 PF01548
(DEDD_Tnp_IS110)
 click to view
Estimated TM-score=0.69;
hard target.		 >Transposase (Length=156)
VGIDIAKNKHDVTALNVPGKTVLKPLTFSNNKAGFELLDLSLRQLNQDCLIALEDTGHYAFNLLNFLHEQGYKVYTYTPL
LIKEFAKSLSLRKTKTDKKDAHGIALKLLSDPNREQFQHDNRQVELKILARHIHRLKRKQSDWKVQYTRCLDIIFP
3061 PF15652
(Tox-SHH)
 click to view
Estimated TM-score=0.69;
hard target.		 >HNH/Endo VII superfamily toxin with a SHH signature (Length=102)
NSPLENHHGVMDVWAKHNVPNYVSRGSNTPTVALTKEQHNATKKVYREWLFEKTGKKVGGKVNWKEVSPREIQELTEKMF
DAANVPKEARQQYYNAFNQYNF
3062 PF17527
(ALC)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Phage ALC protein (Length=167)
MDLQLITTEMVVEAYGDTTDGISVFKGNRRVGYITDLKKDLAKQVKRKTTIKEYRNRRLEQARDMLPDAVEEMKVFLENQ
LAKYDCEVFINQTQPNVHINSCKCYIIVNPLTGKHRLGISNPNRSASDMAEDVEACFKISKSPAEHHILINGLSQDDIVE
VIKTLCM
3063 PF12262
(Lipase_bact_N)
 click to view
Estimated TM-score=0.69;
hard target.		 >Bacterial virulence factor lipase N-terminal (Length=241)
KVTFESEVQALLDRGTSISFTIQGANADVPAPSYLLMDTSDGTLGLPTNGDDALTNPRASMNTMDGWSTSMPIVLNFKGD
GFAPGMLASGVKVIKINQRLTEWDGKTNPIAKVLVQNQDYVVQANGKSLYVQFADSLDESSEYIFAVTQDVTDVNGEPIG
TSSSYAVAKSKQVKYESGDLASVQAVTEAVEGIFGLAQVNPADIVYSSWFSTQSVGDTLAAVKGVTATGFATGANTLNTI
Y
3064 PF12463
(DUF3689)
 click to view
Estimated TM-score=0.69;
hard target.		 >Protein of unknown function (DUF3689) (Length=308)
VHKMIAEFKLIPGLNNLFDKLIWRKPSASTLVLHGHNQNCDCSPDISLKIQFLRLLQSFSDHHENKYLLLNSQELNELSA
ISLKANIPEVEAVANTDRSLVCDGKKGLLTRLLQVMKKEPAESSFRFWQARAVESFLRGVTSYADQMFLLKRGLLEHILY
CIVDSECKSRDVLQSYFDLLGELMKFNIDAFKRFNKYINTDEKFQIFLNQINSSLVDSNMLVRCIALSLDRFENQSDDIK
VAEVLSECRLLSYMTEGSIRMNFLFRLINIIHVQTLTQENVSCLNTSLVILMLARRKGRLPCYLQNIR
3065 PF05631
(MFS_5)
 click to view
Estimated TM-score=0.69;
easy target.		 >Sugar-tranasporters, 12 TM (Length=354)
FYYLVFGGLAAVVAGLELGKSGKDRVATTPAFNAFKNNYILVYSLMMSGDWLQGPYVYYLYSQYGFDKGDIGRLFIAGFG
SSMLFGTIVGSLADKQGRKRACITYCISYILSCITKHSPEYKILMIGRVLGGIATSLLFSAFESWLVAEHNKRGFDPQWL
SITFSKAIFLGNGLVAIIAGLFANLLADNLGFGPVAPFDAAACFLAIGMAIILSSWSENYGDTSDNKDLIAQFKVAAKAI
ASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPHGFIFATFMLSSMLGSSIASRLLARKLKVEGYMQIVFSISA
FTLFLPVVTNFLVPPSSVKGGGISFGGCLQLLGF
3066 PF04256
(DUF434)
 click to view
Estimated TM-score=0.69;
hard target.		 >Protein of unknown function (DUF434) (Length=55)
LTDAYRDLRYLLNRGYPKKSALKFVADHYRLSLRDRYLLARCVFSDAWIAEVRRK
3067 PF15581
(Imm58)
 click to view
Estimated TM-score=0.69;
hard target.		 >Immunity protein 58 (Length=109)
MKKLTLFLLLSLSVSIICCAFFAYFWIDRSISLDYLQQSYETERSSVANLQKLIASEWKGLPEGQVQKKLEQVAAKSPER
RIVVKKEGSIIWFDQVPFNIEQGRLDSVG
3068 PF15657
(Tox-HNH-EHHH)
 click to view
Estimated TM-score=0.69;
hard target.		 >HNH/Endo VII superfamily nuclease toxins (Length=69)
VLGENGRPVMTREYTYVRPDGSKVIIQDHSAGHRFGEGGIGDRGPHFNVRPPENTRSGHVPGTDDHYPF
3069 PF13209
(DUF4017)
 click to view
Estimated TM-score=0.69;
hard target.		 >Protein of unknown function (DUF4017) (Length=60)
MKNIIPPLLVYFIVCVISVIIPASEGYNYVGWKLFVGQVYAIPIFFITAIITFYINKKKS
3070 PF18839
(LPD24)
 click to view
Estimated TM-score=0.69;
hard target.		 >Large polyvalent protein associated domain 24 (Length=70)
EVMEQVRIYFKENLPKYTVLKIRKKSYHPDDSHLYMAAAKKDDGTYAVWTCWNQKLKSLNHGHYGLQSKE
3071 PF07042
(TrfA)
 click to view
Estimated TM-score=0.69;
easy target.		 >TrfA protein (Length=282)
KKRTAGGELAEKVSEAKQTALLKHTKQQIKDMQLSLFDLAPWTGSHAALPNDFGRSAIFTVRNKKVPRPALQGQSIYHVN
KDVEITYTGIELRADDDELVFAQVLEYANGTALGEPVSFTFYELCQDLDWSINGRYYTRAEECLTRLQASAMQFSSQRIG
RLESVSLIRRFRVLDRGKRTSRCQVEIDAEIVVLFAGDHYTKFVWEKYRKLSPNRDGRMFDYFATHKEPYPLKLETFRLM
CGSDSTRPKKWREQVGEACDELRENGLVESAWVNDDLVHCKR
3072 PF08850
(DUF1820)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Domain of unknown function (DUF1820) (Length=95)
TYKVIFLNQGQVYEVFARAIYQSEMYGFIEVEEFVFGERSQLLVDPAEERLKNEFAGVKRSYIPMHAIVRIDEVEKEGSA
KISEFKGSDKVAQFP
3073 PF09681
(Phage_rep_org_N)
 click to view
Estimated TM-score=0.69;
easy target.		 >N-terminal phage replisome organiser (Phage_rep_org_N) (Length=120)
WIKITTNMFDDEKIKLIDAMPERDTIHYIWIRLLVQAGKTNANGYIFLNENVPYTEEMLSTIFNRPLNSVRLALKTLMDF
GMIEIQEDKLIKITNWSKHQNIEGMEKVREQNRLRKQKQR
3074 PF12087
(DUF3564)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Protein of unknown function (DUF3564) (Length=119)
MRLTVHLDTFDRVHPMAFAILWLDKDARKWSREGHLGLELPEWGTLHVDCGNTLVCGPHDTTPVCVLEGLDLNDRDGPFE
GETGRAQWCAERGRTLMTGHWHVQCVDNEQVQPEHGLFA
3075 PF16574
(CEP209_CC5)
 click to view
Estimated TM-score=0.69;
easy target.		 >Coiled-coil region of centrosome protein CE290 (Length=128)
TMIQLQNDKLKILEEVQHAQQERRNAENRALEMELKLKGLEELISALKDTRGAQKVIEWHMKMEELRLQELKLNRELVKQ
KEEMKYLNNIISEYECTISNLEEEIVQQNKFHEERQISWDQREVELQR
3076 PF06019
(Phage_30_8)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Phage GP30.8 protein (Length=123)
MNTINLNATIKCRDHDGYKSQVVNELQWMVRSVQGDVVYCTTPDGPSDDFCYHIEIENFFTGEIYRLNSTVYGCIRSKTY
EDEETGYSEDVVWYENARNRAESLIEKIKAKGVIDSAKWTKIK
3077 PF13937
(DUF4212)
 click to view
Estimated TM-score=0.69;
hard target.		 >Domain of unknown function (DUF4212) (Length=76)
AEYWSANLRLLAILLTIWFIVSFGFGILLVEPLNTIMLGGYPLGFWFAQQGSIYIFVALIFIYAVSMNTLDNKFDV
3078 PF09925
(DUF2157)
 click to view
Estimated TM-score=0.69;
hard target.		 >Predicted membrane protein (DUF2157) (Length=156)
LWRDEGIIQDSQYEQLSQRYQFDSLDNVAQDRFIFILIGVGCILVGLGAITFVAANWQAWSREVKLVLLLSLFFATNIIG
FFLWREPVFDNAGKKRRQRKRVFGHGLLLLGALLLGANMAFMAQTFHISGSDYELYLFWGIGVLVMAYGLRLASLG
3079 PF10311
(Ilm1)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Increased loss of mitochondrial DNA protein 1 (Length=178)
ISAKTIITSLSLFHITLGYFFLTSPITVADQALVWVLGEAMGMPFARAFDSQSPSLAFLAVMLAFVGITDLVTLSLPDEI
CLVHHWGTQAPLRMSVFLFLVFYTFTFSASSPIYAGANPRGILSHPSAHMHNPGYKPATWGGDGLKNRVFFTFIFLELMC
WFWVWVTLREERKEVLTR
3080 PF03348
(Serinc)
 click to view
Estimated TM-score=0.69;
trivial target.		 >Serine incorporator (Serinc) (Length=432)
CCAGSAACSLFCKKKVGGIRSRLYFTVFLLLGTVLCLVMLSPNMRLYLDKIPFLCTRLASKRTCDNFVGYGAVYRVSIAM
SMFFLLFSFLTYNVHSKKKFRARIHNGFWYIKLSLLVLIIGFVFYLPSSELISKIWMYVGLTGGFMFILIQIILVIDFGH
SWSVSWAEKMDTLDTKCWYFSLAFSTALVYSISVTAAVMFYLFFTNPDDISQCKANTFYISFNVGHCALATIISVLPRIQ
EETTGAGLLQSSVITIYTMYLTWNTLSSQPDSKCNPLGAVILEYDKVSGVNGQAIFGALLMFALLAFACTVRASTSQLGK
LGLSLSDNPEYLRKSVEINTKQRKQENIPDEDGKGAEELESEDVAYSYSFFHFVLFLASLHVMMVMTNWHSPDENVDFKK
MIKNWAAVWVQMASSYICCLVYIWTLVAPLIR
3081 PF15496
(DUF4646)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Domain of unknown function (DUF4646) (Length=126)
PQQFLRAPRTDLPYGPFEPAALTSLDNNLDKGFPLLAPPVPTVPHPFAMHDVAEDDWQRFLHDVKIASSLSTMDKIKAGV
APMAIGVAPLTGFLVSKGIEKRMRTKKSNAIGELIEHWNAHFFHPR
3082 PF15416
(DUF4623)
 click to view
Estimated TM-score=0.69;
trivial target.		 >Domain of unknown function (DUF4623) (Length=446)
DDYPVAPDTSSNMTVLNSIKLMNAGANGATVLQGVVDENTKTVTFPRIEPGTDFSNLKFEADLSPGAKLNQETYPVTFEE
GQTEKVIVLKVLNSPRYREYLVKLRLKVPVFGADFENKTTYDFTSNPLGNPIYDAFTGALTRGSGFDGQQVLIPRREAPH
LLNVSELKAGVINKIPLNITGVTLGTFTLNMAAQVNGHSYIANLSGNTAGSPLKIYHWTNPSLAPQVIANINVGTITGAG
VRYGDNFSASLDDQGNGYFFFGDNAGTKILRFDVANYTSVTNPIAFAIPVAAAGSWTSYNRIGNTSEYLFTGHDAPVALV
SEGGTAAFTMSRTAIPVRGSDARVVYFNGERYLIVTTAARTGAEATNFIVYDITKGENVKDALTNLNAQALVKPVFEYSL
MGPVNTSPASQTGFYVKKDAMGNDVSLMLYAAASDAGFVFFEFQKK
3083 PF18759
(Plavaka)
 click to view
Estimated TM-score=0.69;
easy target.		 >Plavaka transposase (Length=318)
FDSYDHMYAVIDEIGEGSAPWKCFVSQGEENLPPNAPNWRREEYQIWYRDPQTVIANMLDNPDFTGEFDAAPYIHLDPSD
KRRWGDFMSGNYPWRHSKTQIFEEDPSTEGAMYVPIILGSDKTTVSVATGNVEYHPLYMSIGNIHSSVRRAHRNGVVPIG
FLAIPKSDRKYDKDPAFRAFKRKLYHQSIASILSTLTSGMCTPEVRRCPDGHFRRVVYDLVAFIADYPEQVLLTGIVQGW
CARCTAFASDLDGSEASGRRSKDLTSDLIQEFQGQGTLLWDNYGIDDEIIINIHEMISSDLLHQIIKGSFKDHLVTWV
3084 PF13274
(DUF4065)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Protein of unknown function (DUF4065) (Length=111)
LKLLWLADRLHARMYGRTITGDCYKAMHNGPVASATRDILEYGITKSIKTEATTYLKSIEEDRYLFGSVGEVNYKVFSKT
DIDCLDMVMETFGDQEEFQLSKLSHSFPEWK
3085 PF05078
(DUF679)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Protein of unknown function (DUF679) (Length=168)
TAANLAQLLPTGTVLTFQALAPSFTRGGACYTSNRCLISVLIALNAVFCVFFSITDSLVGADNRLYYGVATLRSLYVFNY
NGADEEVRRRVLGDLEEYRLRPLDYVHAVFTVLVFLTIAFGDAMVQHCLFPDAGPNARELLVNLPLGAGVVSTLVFIVFP
TSRKGIGY
3086 PF11387
(DUF2795)
 click to view
Estimated TM-score=0.69;
easy target.		 >Protein of unknown function (DUF2795) (Length=44)
LKGMDYPAGREDLVAHAQRNNAPESVITILQGFSDRTYRSAAEV
3087 PF15406
(PH_6)
 click to view
Estimated TM-score=0.69;
easy target.		 >Pleckstrin homology domain (Length=106)
NLIPSKEFFFFGTEAVEPKALSHYLKSEKSAETAHSNIAWASETGKGLLFVGDKKNPSSVISLADATEPEIDGSHKFHLT
SKGNKHTFKASSAAERDNWVAQLKLK
3088 PF15625
(CC2D2AN-C2)
 click to view
Estimated TM-score=0.69;
easy target.		 >CC2D2A N-terminal C2 domain (Length=173)
PGEPKLFPEITNSGIVTSASNCSKLEQARRNEVSKRKIYFKIFYNNKQVCQTTERSLGQEFTATWGQIFKLCIVHKPQNV
KIEIFEKNGVLSTRLADIWLPLPDPSLTTNNVQLLDQEFCSEEVITYRHAGIGSGVAIHYLKDDQATWLLTNGILKCSLA
WGINKEGKSLGPK
3089 PF14020
(DUF4236)
 click to view
Estimated TM-score=0.69;
very hard target.		 >Protein of unknown function (DUF4236) (Length=54)
FRFQKRIKIAPGVRLNISKSGVSTSVGLRGASVTVGKRGVRTNVGIPGTGISYS
3090 PF03219
(TLC)
 click to view
Estimated TM-score=0.69;
easy target.		 >TLC ATP/ADP transporter (Length=490)
MSETKHEFGKWRSFFWPVHGYELKKLLPMFLMFFCISFNYTILRDTKDTLVVTASGAETIPFLKVWGVVPAAIIFMLIYA
KMSNILSKENLFYATIAPFLVFFAFFAYVLYPNRDALHPDATADYLQSVLPLGLKGLIACFRNWTYSLFYILSELWGSVV
LSLLFWGFANDITRVTEAKRFYSLFGLGANLALLFSGPAIVYVSDIRKTLPADVDAWQVSLNYLMTMVVIAGALVIAVYW
WINRNVLTDPRFYDPTEEKKTKKSKPKMSITESFAFLLKSKYILCLAILVIAYGISINLVEVTWKSQLKLQYPNANDYST
FMGKFSFFTGLVTIFMMLFVGGNLIRKKGWGFAAMITPVVLLVTGTGFFGFVLFRDNLAGLISSLGTSPLFLAVMFGAAQ
NIMSKSAKYSLFDPTKEMAYIPLDQESKVKGKAAIDVVGARLGKSGGSFVQQALLVGFGSIAAITPYVAAILLVIIIAWM
YAVKSLNKQF
3091 PF19103
(DUF5790)
 click to view
Estimated TM-score=0.69;
hard target.		 >Family of unknown function (DUF5790) (Length=126)
MSQATFDDDELFGEAAAETREDVEQHLSAAREALPTADDIWETDADNVLGVLNGLKSALDVGEAPEHLRQAKKWYTLGER
ADAFEDAEDLEADIEAIEELLETIEAAHDDVGELTGTVPQLRGSLQ
3092 PF10460
(Peptidase_M30)
 click to view
Estimated TM-score=0.69;
easy target.		 >Peptidase M30 (Length=365)
DKTTRPATLRTQVTAPGNVRVNFWVEDAEFTAGNITQAMVDGLAAAFANSGGIYDKLVNIGGPVWGPNSYGGTMLPDGQP
LDIVILNFNRDGQPFGTVGYFWSMHNFLKSSAQNSNEAISLYLDSETLSLGGASGLQSVKTVMAHEGTHMQNFYRRQVSM
GAAYAYDTWLEEMTAMQMEDFQSHDIDPTYNPIRDLRLPDFYRYGAYNCNVLQFTGFGASCESYSVSGSLGGFLNRQLGL
AFYKDLLTRATTGSKTVLDQAIRAAQPGWTFEQALLNWKVTTTAALPAASAPAGFGYPGRTDGVYVLPQIDPSLPAYAAL
RKLPAIAPIFLQGYGTYAAARSDSNGVYSDKVRVPAGAALSVVVY
3093 PF15606
(Ntox34)
 click to view
Estimated TM-score=0.69;
hard target.		 >Bacterial toxin 34 (Length=75)
PGLALDITMIASRGNVADTGITDRVNDIINDRFWSDGKKPDRCDVLQELIDCGDISAKDAKSTQKAWNCRHSRQS
3094 PF06871
(TraH_2)
 click to view
Estimated TM-score=0.69;
easy target.		 >TraH_2 (Length=203)
MLDAALIQQCADPSLKPAIVEQFVTAAGANDPFAVTVKSGGRLILVPKATTQDEAMAIIRQYVGQTVVRVGLTQFPAGVG
VKDAADLNSDLVDPCENLRKGTAMFAKVLRIVAKWYGNPKSDDVFPQIFDDAVYAWKSGEFEGVSVFQADDPGKSVTIDN
TLPANLDKASADIPPADANTESVEKGESVGSAEMRIDLSRIGG
3095 PF08748
(Phage_TAC_4)
 click to view
Estimated TM-score=0.69;
hard target.		 >Phage tail assembly chaperone (Length=127)
MAKIKIAQNPTFKAPVMIPRIGEAAVKVEFEFKYMDRTELAEMFGRWNKVRAELNSKHTDDGITWQEVTASEIALQVEQI
KDVVTGWSFDDKFTDEAVAALVTTCVGAPQAVIDAYQSAYDPARLGN
3096 PF06157
(DUF973)
 click to view
Estimated TM-score=0.69;
hard target.		 >Protein of unknown function (DUF973) (Length=306)
ELEGIKSIRSGVLFEIITALLVGIGIIILLTSGVLTAGLSGSAVGAFSSIVGTLIGLIVLIIIGVVIGIVGLLRIRSGFN
ILKATRRDVGIGGTGVTLLLVGYILMVIGALLAIVFIGIPILFIGVILAVIGQILLGIGFYRIGEIYNVGLVKVGGILVI
LSILTDLLGFIGYILIYVGLGRVVSNLPMATPAQMQTYYPPLTPMPQPSTQAVQVSQVGQGVLRGDGYAQFTLYTTAQVT
IVSASIEGTNLQATYINPIILQPGNNNIMAYFGNISNLTPGTTYIINLTINAQGNMMNIKVSVVYQ
3097 PF04412
(AcnX)
 click to view
Estimated TM-score=0.69;
easy target.		 >Aconitase X (Length=402)
MYLTKEEEKMYNGEYGEALETCMNLLVSLGDIYGAEKLVPISSAQVSGVSYKTIGEKGLEFLKDLAEKGVKVSVPTTLNP
AGMDLVRYKELGFPEEFSKKQLEIIECFKKMGVEISCTCTPYLTGNVPVFGSHVAWAESSAVCYVNSVIGARTNREGGPS
ALAAAIVGKTPCYGYHLDENRSPTHIVEVEFETYAKGKTKFEFGLLGSIVGKIVKNGIPYFKFKKAEHIKTDQLKALGAA
LAASGGVALYHVEDVTPEAKKGMPIVQENLERITITEEDIKNEYEILNSTTGAPDLICIGCPHCSLDEIKEVVDFITEQN
AKFKSDLWVCTSIHIKSIADRMGYTEIIENAGGKIVTDTCMVVAPIEDMGYKNVATNSGKAAIYLPNFCKSNVIYGEISE
IL
3098 PF14615
(Rsa3)
 click to view
Estimated TM-score=0.69;
hard target.		 >Ribosome-assembly protein 3 (Length=47)
FRKFWMASVADGFKDDLEQIRVKEPNLGQSRLALLIDSLASGADVFS
3099 PF04904
(NCD1)
 click to view
Estimated TM-score=0.69;
easy target.		 >NAB conserved region 1 (NCD1) (Length=78)
PTNESELQLYRVLQRANLLSYYDTFICQGGDDVQQLCEAGEEEFLEIMALVGMASKPLHVRRLQKALQEWVNNPAMFQ
3100 PF13952
(DUF4216)
 click to view
Estimated TM-score=0.69;
hard target.		 >Domain of unknown function (DUF4216) (Length=77)
LEIQYMNNKSVMLFQCDWFEVPPQGRSQSRGYKKDEYGFVCVDITRLHYTSDPFILGSQAQSVYYVKHGQSEKWHSV

Search by Pfam ID:
Go to page (83 pages in total): [First page] << < 26 27 28 29 30 31 32 33 34 35 36 > >> [Last page] [All entries in one page].

Bulk download:

[Back to server]

[an error occurred while processing this directive]

yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218