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BioLiP

PDB CCD ID: XYZ
Number of entries in BioLiP: 6
Chemical formula: C5 H10 O5
InChI: InChI=1S/C5H10O5/c6-1-2-3(7)4(8)5(9)10-2/h2-9H,1H2/t2-,3+,4-,5-/m1/s1
InChIKey: HMFHBZSHGGEWLO-KKQCNMDGSA-N
SMILES:
SoftwareSMILES
OpenEye OEToolkits 1.5.0C(C1C(C(C(O1)O)O)O)O
CACTVS 3.341OC[C@H]1O[C@@H](O)[C@H](O)[C@H]1O
CACTVS 3.341OC[CH]1O[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.5.0C([C@@H]1[C@@H]([C@H]([C@@H](O1)O)O)O)O
ACDLabs 10.04OC1C(OC(O)C1O)CO
Name:beta-D-xylofuranose;
beta-D-xylose;
D-xylose;
xylose
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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