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BioLiP Library

PDB CCD ID: VWP
Number of entries in BioLiP: 2
Chemical formula: C29 H40 N8 O4
InChI: InChI=1S/C29H40N8O4/c30-15-4-3-12-23(27(40)35-22(26(31)39)13-6-16-34-29(32)33)36-28(41)24-14-7-17-37(24)25(38)18-20-10-5-9-19-8-1-2-11-21(19)20/h1-2,5,7-11,14,22-24H,3-4,6,12-13,15-18,30H2,(H2,31,39)(H,35,40)(H,36,41)(H4,32,33,34)/t22-,23-,24-/m0/s1
InChIKey: FRFITSHXIRHPKA-HJOGWXRNSA-N
SMILES:
SoftwareSMILES
CACTVS 3.385NCCCC[C@H](NC(=O)[C@@H]1C=CCN1C(=O)Cc2cccc3ccccc23)C(=O)N[C@@H](CCCNC(N)=N)C(N)=O
OpenEye OEToolkits 2.0.7[H]/N=C(/N)\NCCC[C@@H](C(=O)N)NC(=O)[C@H](CCCCN)NC(=O)[C@@H]1C=CCN1C(=O)Cc2cccc3c2cccc3
OpenEye OEToolkits 2.0.7c1ccc2c(c1)cccc2CC(=O)N3CC=CC3C(=O)NC(CCCCN)C(=O)NC(CCCNC(=N)N)C(=O)N
ACDLabs 12.01C1(C=CCN1C(Cc2cccc3c2cccc3)=O)C(NC(C(=O)NC(C(=O)N)CCCNC(=N)\N)CCCCN)=O
CACTVS 3.385NCCCC[CH](NC(=O)[CH]1C=CCN1C(=O)Cc2cccc3ccccc23)C(=O)N[CH](CCCNC(N)=N)C(N)=O
Name:N~2~-{(2S)-1-[(naphthalen-1-yl)acetyl]-2,5-dihydro-1H-pyrrole-2-carbonyl}-L-lysyl-L-argininamide
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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