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BioLiP

PDB CCD ID: UZJ
Number of entries in BioLiP: 1
Chemical formula: C5 H10 O4
InChI: InChI=1S/C5H10O4/c6-3-1-5(8)9-2-4(3)7/h3-8H,1-2H2/t3-,4+,5+/m0/s1
InChIKey: ZVQAVWAHRUNNPG-VPENINKCSA-N
SMILES:
SoftwareSMILES
OpenEye OEToolkits 2.0.7C1[C@@H]([C@@H](CO[C@H]1O)O)O
CACTVS 3.385O[CH]1C[CH](O)[CH](O)CO1
OpenEye OEToolkits 2.0.7C1C(C(COC1O)O)O
CACTVS 3.385O[C@H]1C[C@H](O)[C@H](O)CO1
ACDLabs 12.01C1(O)C(CC(O)OC1)O
Name:2-deoxy-beta-D-ribopyranose;
2-deoxy-beta-D-erythro-pentopyranose
ZINC: ZINC000004521357
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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