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BioLiP

PDB CCD ID: TK8
Number of entries in BioLiP: 1
Chemical formula: C5 H10 O6
InChI: InChI=1S/C5H10O6/c6-1-2(7)3(8)4(9)5(10)11/h2-4,6-9H,1H2,(H,10,11)/t2-,3+,4-/m1/s1
InChIKey: QXKAIJAYHKCRRA-FLRLBIABSA-N
SMILES:
SoftwareSMILES
CACTVS 3.385OC[C@@H](O)[C@H](O)[C@@H](O)C(O)=O
OpenEye OEToolkits 2.0.7C(C(C(C(C(=O)O)O)O)O)O
CACTVS 3.385OC[CH](O)[CH](O)[CH](O)C(O)=O
OpenEye OEToolkits 2.0.7C([C@H]([C@@H]([C@H](C(=O)O)O)O)O)O
Name:D-xylonic acid;
(2~{R},3~{S},4~{R})-2,3,4,5-tetrakis(oxidanyl)pentanoic acid;
(2R,3S,4R)-2,3,4,5-tetrahydroxypentanoic acid;
xylonic acid
ZINC: ZINC000008551175
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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