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BioLiP

PDB CCD ID: RI2
Number of entries in BioLiP: 29
Chemical formula: C5 H12 O11 P2
InChI: InChI=1S/C5H12O11P2/c6-3-2(1-14-17(8,9)10)15-5(4(3)7)16-18(11,12)13/h2-7H,1H2,(H2,8,9,10)(H2,11,12,13)/t2-,3-,4-,5-/m1/s1
InChIKey: AAAFZMYJJHWUPN-TXICZTDVSA-N
SMILES:
SoftwareSMILES
OpenEye OEToolkits 1.7.0C([C@@H]1[C@H]([C@H]([C@H](O1)OP(=O)(O)O)O)O)OP(=O)(O)O
CACTVS 3.370O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(O)=O)O[P](O)(O)=O
ACDLabs 12.01O=P(O)(O)OCC1OC(OP(=O)(O)O)C(O)C1O
OpenEye OEToolkits 1.7.0C(C1C(C(C(O1)OP(=O)(O)O)O)O)OP(=O)(O)O
CACTVS 3.370O[C@H]1[C@@H](O)[C@H](O[C@@H]1CO[P](O)(O)=O)O[P](O)(O)=O
Name:1,5-di-O-phosphono-alpha-D-ribofuranose;
1,5-di-O-phosphono-alpha-D-ribose;
1,5-di-O-phosphono-D-ribose;
1,5-di-O-phosphono-ribose
ZINC: ZINC000013522068
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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