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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP

PDB CCD ID: OYO
Number of entries in BioLiP: 4
Chemical formula: C8 H14 O5
InChI: InChI=1S/C8H14O5/c1-8(2)12-6-5(10)4(3-9)11-7(6)13-8/h4-7,9-10H,3H2,1-2H3/t4-,5-,6+,7+/m1/s1
InChIKey: JAUQZVBVVJJRKM-JWXFUTCRSA-N
SMILES:
SoftwareSMILES
OpenEye OEToolkits 2.0.7CC1(OC2C(C(OC2O1)CO)O)C
CACTVS 3.385CC1(C)O[C@@H]2O[C@H](CO)[C@@H](O)[C@@H]2O1
CACTVS 3.385CC1(C)O[CH]2O[CH](CO)[CH](O)[CH]2O1
OpenEye OEToolkits 2.0.7CC1(O[C@H]2[C@@H]([C@H](O[C@H]2O1)CO)O)C
Name:(3~{a}~{S},5~{R},6~{R},6~{a}~{S})-5-(hydroxymethyl)-2,2-dimethyl-3~{a},5,6,6~{a}-tetrahydrofuro[2,3-d][1,3]dioxol-6-ol
ZINC: ZINC000000120392

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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