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BioLiP

PDB CCD ID: ORP
Number of entries in BioLiP: 0
Chemical formula: C5 H11 O7 P
InChI: InChI=1S/C5H11O7P/c6-3-1-5(7)12-4(3)2-11-13(8,9)10/h3-7H,1-2H2,(H2,8,9,10)/t3-,4+,5-/m0/s1
InChIKey: KKZFLSZAWCYPOC-LMVFSUKVSA-N
SMILES:
SoftwareSMILES
CACTVS 3.341O[CH]1C[CH](O)[CH](CO[P](O)(O)=O)O1
ACDLabs 10.04O=P(OCC1OC(O)CC1O)(O)O
OpenEye OEToolkits 1.5.0C1C(C(OC1O)COP(=O)(O)O)O
OpenEye OEToolkits 1.5.0C1[C@@H]([C@H](O[C@@H]1O)COP(=O)(O)O)O
CACTVS 3.341O[C@@H]1C[C@H](O)[C@@H](CO[P](O)(O)=O)O1
Name:2-DEOXY-5-PHOSPHONO-RIBOSE
ZINC: ZINC000003869833
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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