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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP

PDB CCD ID: CV9
Number of entries in BioLiP: 4
Chemical formula: C49 H71 N O12
InChI: InChI=1S/C49H71NO12/c1-31-21-15-11-14-18-26-43(54)62-45(35(5)40(53)28-34(4)51)32(2)22-16-12-13-17-24-39(52)29-42(56-8)36(6)48-50-38(30-59-48)23-19-20-25-41(33(3)27-31)61-49-47(58-10)46(57-9)44(55)37(7)60-49/h11-27,30,32-37,39-42,44-47,49,51-53,55H,28-29H2,1-10H3/b13-12+,14-11+,21-15-,22-16-,23-19-,24-17+,25-20+,26-18-,31-27+/t32-,33+,34-,35-,36+,37+,39+,40-,41-,42+,44+,45+,46-,47+,49-/m0/s1
InChIKey: OVMUGRSUGHRYEC-QKLXNKFISA-N
SMILES:
SoftwareSMILES
OpenEye OEToolkits 2.0.7C[C@H]1/C=C\C=C\C=C\[C@H](C[C@H]([C@H](c2nc(co2)/C=C\C=C\[C@@H]([C@@H](/C=C(/C=C\C=C\C=C/C(=O)O[C@H]1[C@@H](C)[C@H](C[C@H](C)O)O)\C)C)O[C@H]3[C@@H]([C@H]([C@@H]([C@H](O3)C)O)OC)OC)C)OC)O
CACTVS 3.385CO[CH]1C[CH](O)C=CC=CC=C[CH](C)[CH](OC(=O)C=CC=CC=CC(=C[CH](C)[CH](O[CH]2O[CH](C)[CH](O)[CH](OC)[CH]2OC)C=CC=Cc3coc(n3)[CH]1C)C)[CH](C)[CH](O)C[CH](C)O
CACTVS 3.385CO[C@@H]1C[C@H](O)\C=C\C=C\C=C/[C@H](C)[C@@H](OC(=O)\C=C/C=C/C=C\C(=C\[C@@H](C)[C@@H](O[C@@H]2O[C@H](C)[C@@H](O)[C@H](OC)[C@H]2OC)\C=C\C=C/c3coc(n3)[C@@H]1C)C)[C@@H](C)[C@@H](O)C[C@H](C)O
OpenEye OEToolkits 2.0.7CC1C=CC=CC=CC(CC(C(c2nc(co2)C=CC=CC(C(C=C(C=CC=CC=CC(=O)OC1C(C)C(CC(C)O)O)C)C)OC3C(C(C(C(O3)C)O)OC)OC)C)OC)O
Name:(2~{R},3~{R},5~{S},6~{E},8~{E},10~{Z},12~{S},13~{R},16~{Z},18~{E},20~{Z},22~{E},24~{R},25~{S},26~{E},28~{Z})-13-[(2~{S},3~{S},5~{S})-3,5-bis(oxidanyl)hexan-2-yl]-25-[(2~{R},3~{R},4~{S},5~{R},6~{R})-3,4-dimethoxy-6-methyl-5-oxidanyl-oxan-2-yl]oxy-3-methoxy-2,12,22,24-tetramethyl-5-oxidanyl-14,32-dioxa-33-azabicyclo[28.2.1]tritriaconta-1(33),6,8,10,16,18,20,22,26,28,30-undecaen-15-one

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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