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BioLiP

PDB CCD ID: CSL
Number of entries in BioLiP: 0
Chemical formula: C10 H16 N3 O7 P Se
InChI: InChI=1S/C10H16N3O7PSe/c1-22-8-7(14)5(4-19-21(16,17)18)20-9(8)13-3-2-6(11)12-10(13)15/h2-3,5,7-9,14H,4H2,1H3,(H2,11,12,15)(H2,16,17,18)/t5-,7-,8-,9-/m1/s1
InChIKey: INVVCVIDTHAWAJ-ZOQUXTDFSA-N
SMILES:
SoftwareSMILES
OpenEye OEToolkits 1.5.0C[Se][C@@H]1[C@@H]([C@H](O[C@H]1N2C=CC(=NC2=O)N)COP(=O)(O)O)O
OpenEye OEToolkits 1.5.0C[Se]C1C(C(OC1N2C=CC(=NC2=O)N)COP(=O)(O)O)O
CACTVS 3.341C[Se][C@@H]1[C@H](O)[C@@H](CO[P](O)(O)=O)O[C@H]1N2C=CC(=NC2=O)N
ACDLabs 10.04O=C1N=C(N)C=CN1C2OC(C(O)C2[Se]C)COP(=O)(O)O
CACTVS 3.341C[Se][CH]1[CH](O)[CH](CO[P](O)(O)=O)O[CH]1N2C=CC(=NC2=O)N
Name:(D)-2'-METHYLSELENYL-2'-DEOXYCYTIDINE-5'-PHOSPHATE;
(D)-2'-DEOXY-2'-SE-METHYLCYTIDINE-5'-PHOSPHATE
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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