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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP

PDB CCD ID: BJ3
Number of entries in BioLiP: 2
Chemical formula: C62 H84 N11 O9 P S
InChI: InChI=1S/C62H84N11O9PS/c63-61(64)66-36-20-34-56(83(80,81-45-25-10-3-11-26-45)82-46-27-12-4-13-28-46)72-60(78)51(39-44-40-67-48-30-16-15-29-47(44)48)70-59(77)50(38-43-23-8-2-9-24-43)69-58(76)49(37-42-21-6-1-7-22-42)68-55(75)33-14-5-19-35-65-54(74)32-18-17-31-53-57-52(41-84-53)71-62(79)73-57/h1,3-4,6-7,10-13,15-16,21-22,25-30,43-44,49-53,56-57,67H,2,5,8-9,14,17-20,23-24,31-41H2,(H,65,74)(H,68,75)(H,69,76)(H,70,77)(H,72,78)(H4,63,64,66)(H2,71,73,79)/t44-,49-,50+,51+,52?,53?,56-,57?/m1/s1
InChIKey: LQPBNVJSYRBAJH-ADPDYCRISA-N
SMILES:
SoftwareSMILES
CACTVS 3.385NC(=N)NCCC[CH](NC(=O)[CH](C[CH]1CNc2ccccc12)NC(=O)[CH](CC3CCCCC3)NC(=O)[CH](Cc4ccccc4)NC(=O)CCCCCNC(=O)CCCCC5SCC6NC(=O)NC56)[P](=O)(Oc7ccccc7)Oc8ccccc8
CACTVS 3.385NC(=N)NCCC[C@H](NC(=O)[C@H](C[C@@H]1CNc2ccccc12)NC(=O)[C@H](CC3CCCCC3)NC(=O)[C@@H](Cc4ccccc4)NC(=O)CCCCCNC(=O)CCCCC5SCC6NC(=O)NC56)[P](=O)(Oc7ccccc7)Oc8ccccc8
OpenEye OEToolkits 2.0.7c1ccc(cc1)CC(C(=O)NC(CC2CCCCC2)C(=O)NC(CC3CNc4c3cccc4)C(=O)NC(CCCNC(=N)N)P(=O)(Oc5ccccc5)Oc6ccccc6)NC(=O)CCCCCNC(=O)CCCCC7C8C(CS7)NC(=O)N8
OpenEye OEToolkits 2.0.7[H]/N=C(\N)/NCCC[C@H](NC(=O)[C@H](C[C@@H]1CNc2c1cccc2)NC(=O)[C@H](CC3CCCCC3)NC(=O)[C@@H](Cc4ccccc4)NC(=O)CCCCCNC(=O)CCCCC5C6C(CS5)NC(=O)N6)P(=O)(Oc7ccccc7)Oc8ccccc8
Name:~{N}-[(2~{R})-1-[[(2~{S})-1-[[(2~{S})-1-[[(1~{R})-4-carbamimidamido-1-diphenoxyphosphoryl-butyl]amino]-3-[(3~{S})-2,3-dihydro-1~{H}-indol-3-yl]-1-oxidanylidene-propan-2-yl]amino]-3-cyclohexyl-1-oxidanylidene-propan-2-yl]amino]-1-oxidanylidene-3-phenyl-propan-2-yl]-6-[5-[(4~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]hexanamide

Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
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