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BioLiP

PDB CCD ID: 6SY
Number of entries in BioLiP: 3
Chemical formula: C9 H11 N2 O8 P
InChI: InChI=1S/C9H11N2O8P/c12-5-1-2-11(9(14)10-5)8-6(13)7-4(18-8)3-17-20(15,16)19-7/h1-2,4,6-8,13H,3H2,(H,15,16)(H,10,12,14)/t4-,6-,7-,8-/m1/s1
InChIKey: NXIHNBWNDCFCGL-XVFCMESISA-N
SMILES:
SoftwareSMILES
CACTVS 3.385O[CH]1[CH]2O[P](O)(=O)OC[CH]2O[CH]1N3C=CC(=O)NC3=O
OpenEye OEToolkits 2.0.5C1C2C(C(C(O2)N3C=CC(=O)NC3=O)O)OP(=O)(O1)O
OpenEye OEToolkits 2.0.5C1[C@@H]2[C@H]([C@H]([C@@H](O2)N3C=CC(=O)NC3=O)O)OP(=O)(O1)O
CACTVS 3.385O[C@@H]1[C@@H]2O[P](O)(=O)OC[C@H]2O[C@H]1N3C=CC(=O)NC3=O
Name:Uridine-3',5'-cyclic monophosphate;
cUMP
ZINC: ZINC000013551795
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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