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BioLiP

PDB CCD ID: 2DR
Number of entries in BioLiP: 2
Chemical formula: C5 H10 O4
InChI: InChI=1S/C5H10O4/c6-2-4-3(7)1-5(8)9-4/h3-8H,1-2H2/t3-,4+,5+/m0/s1
InChIKey: PDWIQYODPROSQH-VPENINKCSA-N
SMILES:
SoftwareSMILES
OpenEye OEToolkits 1.6.1C1C(C(OC1O)CO)O
OpenEye OEToolkits 1.6.1C1[C@@H]([C@H](O[C@H]1O)CO)O
CACTVS 3.352OC[CH]1O[CH](O)C[CH]1O
CACTVS 3.352OC[C@H]1O[C@@H](O)C[C@@H]1O
ACDLabs 10.04OCC1OC(O)CC1O
Name:2-deoxy-beta-D-erythro-pentofuranose;
2-deoxy-beta-D-ribofuranose;
2-deoxy-beta-D-erythro-pentose;
2-deoxy-D-erythro-pentose;
2-deoxy-erythro-pentose
ZINC: ZINC000002504594
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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