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BioLiP
>rna
aguagaaacaaggguccccugcuuuugcu

The query sequence (length=29) is searched through a non-redundant set of database sequences rna_nr.fasta.gz clustered at 100% identity cutoff to identify representative hits. Homologs that belong to the same sequence cluster of the representative hit are listed in the last column of the table.

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		Alignment
score 		Homologs
to hit
1 8pnp:V 29 29 1.0000 1.0000 1.0000 58
2 8pm0:V 31 29 1.0000 0.9355 1.0000 39
3 8pnq:V 36 29 0.9310 0.7500 0.9310 9
4 6t0w:V 25 25 0.6897 0.8000 0.8000 -2
5 6t2c:V 29 29 0.5862 0.5862 0.5862 -2
6 6t0s:V 33 29 0.7241 0.6364 0.7241 -9
7 8r3k:V 31 29 0.6552 0.6129 0.6552 -11
8 6t0u:V 23 23 0.6207 0.7826 0.7826 -14
9 6t0r:V 20 20 0.6207 0.9000 0.9000 -17
10 6xzd:IN1 20 20 0.6897 1.0000 1.0000 -18
11 6tw1:V 33 29 0.6552 0.5758 0.6552 -19
12 6xzp:IN1 20 20 0.5862 0.8500 0.8500 -22 6y0c:IN1
13 7s3h:R 30 29 0.5517 0.5333 0.5517 -22
14 6xzg:IN1 19 19 0.6552 1.0000 1.0000 -24 6xzq:I, 6xzr:IN1
15 9asi:T 29 29 0.4138 0.4138 0.4138 -27
16 8e0f:D 32 29 0.5517 0.5000 0.5517 -30
17 3dd2:B 26 26 0.4483 0.5000 0.5000 -31
18 1aud:B 30 29 0.4828 0.4667 0.4828 -32
19 7f49:B 30 29 0.4483 0.4333 0.4483 -32
20 7uzy:G 30 29 0.4828 0.4667 0.4828 -32 7v00:G
21 8h69:5 19 19 0.5172 0.7895 0.7895 -33
22 6aax:B 28 28 0.4483 0.4643 0.4643 -34 6aax:D, 6ajk:B
23 6kyv:A 22 22 0.4828 0.6364 0.6364 -35 6kyv:C, 6kyv:E, 6kyv:G, 6kyv:I, 6kyv:K
24 8e4x:D 32 29 0.5172 0.4688 0.5172 -35 6vff:D
25 2f8t:C 26 26 0.4483 0.5000 0.5000 -36
26 6kwq:B 31 29 0.4828 0.4516 0.4828 -36
27 7xc7:C 31 29 0.4828 0.4516 0.4828 -36
28 8r3l:V 16 16 0.5172 0.9375 0.9375 -36
29 5xwp:D 30 29 0.4483 0.4333 0.4483 -37
30 5xwp:F 29 29 0.3448 0.3448 0.3448 -37
31 6xn4:R 35 29 0.5862 0.4857 0.5862 -37
32 7aav:Z 29 29 0.3448 0.3448 0.3448 -37 7abf:Z
33 7jtn:B 30 29 0.4483 0.4333 0.4483 -37 7jtn:D
34 7v02:G 29 29 0.3448 0.3448 0.3448 -37
35 8r3l:R 15 15 0.5172 1.0000 1.0000 -37
36 3wbm:X 25 25 0.5172 0.6000 0.6000 -38 3wbm:Y
37 6szu:V 44 29 0.8276 0.5455 0.8276 -38
38 4k50:B 33 29 0.5172 0.4545 0.5172 -39 4k50:J
39 5msg:R 18 18 0.4828 0.7778 0.7778 -39 6szv:R, 6t0v:R, 7z43:RRR
40 6g63:B 23 23 0.4483 0.5652 0.5652 -39
41 8h69:3 18 18 0.4828 0.7778 0.7778 -39
42 7nrd:S3 32 29 0.4828 0.4375 0.4828 -40
43 7ynb:C 28 27 0.5172 0.5357 0.5556 -40
44 8gna:C 32 29 0.4828 0.4375 0.4828 -40
45 6mur:G 27 27 0.4828 0.5185 0.5185 -41 6o7e:G, 6o7h:G
46 7uzx:G 31 29 0.4483 0.4194 0.4483 -41
47 3sn2:B 29 29 0.3103 0.3103 0.3103 -42
48 4ifd:R 30 29 0.4138 0.4000 0.4138 -42
49 4x4t:D 30 29 0.4138 0.4000 0.4138 -42
50 5gmk:M 29 29 0.3103 0.3103 0.3103 -42
51 5ms0:R 29 29 0.3103 0.3103 0.3103 -42
52 5np6:A 29 29 0.3103 0.3103 0.3103 -42
53 6fec:F 26 26 0.4828 0.5385 0.5385 -42
54 6omv:G 29 29 0.3103 0.3103 0.3103 -42
55 7nha:D 15 15 0.4828 0.9333 0.9333 -42 7nhc:D, 7nhx:F, 7ni0:D, 7nik:D, 7nil:D, 7nir:D, 7nis:D, 7nj3:D, 7nj4:D, 7nj5:D, 7nj7:D, 7nk1:D, 7nk2:D, 7nk4:D, 7nk6:D, 7nk8:D, 7nka:D, 7nkc:D, 7nki:D, 7nkr:D, 8r60:D, 8r65:D
56 7qv2:A 29 29 0.3103 0.3103 0.3103 -42
57 7to2:B 30 29 0.4138 0.4000 0.4138 -42
58 7uzz:G 30 29 0.4138 0.4000 0.4138 -42 7v01:G
59 7zw0:sm 29 29 0.3103 0.3103 0.3103 -42
60 8hsr:R 29 29 0.3103 0.3103 0.3103 -42
61 7yna:C 25 25 0.4828 0.5600 0.5600 -43
62 8poh:V 14 14 0.4828 1.0000 1.0000 -43 8poh:U
63 7abh:Z 28 28 0.3793 0.3929 0.3929 -44
64 7adc:R 28 28 0.3793 0.3929 0.3929 -44 7add:R, 6z9r:R, 6z9s:R, 6z9t:R
65 8apo:C1 23 23 0.4138 0.5217 0.5217 -44
66 3x1l:I 32 29 0.4483 0.4062 0.4483 -45
67 4x4p:F 27 27 0.3793 0.4074 0.4074 -45
68 6exn:E 32 29 0.4483 0.4062 0.4483 -45
69 1k8w:B 22 22 0.4828 0.6364 0.6364 -46 1zl3:B
70 4jk0:B 21 21 0.4138 0.5714 0.5714 -46
71 5c0x:R 31 29 0.4138 0.3871 0.4138 -46
72 6fyx:3 31 29 0.4138 0.3871 0.4138 -46 6fyy:3
73 6zym:2 27 25 0.5172 0.5556 0.6000 -46
74 7jtq:B 31 29 0.4138 0.3871 0.4138 -46 7jtq:D
75 8d49:B 26 26 0.3793 0.4231 0.4231 -46
76 8epk:E 31 29 0.4138 0.3871 0.4138 -46 8epk:F
77 1jid:B 29 29 0.2759 0.2759 0.2759 -47
78 1ooa:C 29 29 0.2759 0.2759 0.2759 -47 1ooa:D
79 2bh2:C 30 29 0.3793 0.3667 0.3793 -47 2bh2:D
80 4ce4:B 29 29 0.2759 0.2759 0.2759 -47
81 4x4p:D 30 29 0.3793 0.3667 0.3793 -47
82 4x4r:D 30 29 0.3793 0.3667 0.3793 -47 4x4s:D
83 4x4u:D 26 26 0.4483 0.5000 0.5000 -47
84 5lm7:R 29 29 0.2759 0.2759 0.2759 -47
85 6gte:B 29 29 0.2759 0.2759 0.2759 -47 6gtf:B
86 6o7i:G 26 26 0.4483 0.5000 0.5000 -47
87 7a5p:Y 29 29 0.2759 0.2759 0.2759 -47
88 7azo:MRNA 30 29 0.3793 0.3667 0.3793 -47 7azo:MRNB, 7azs:MRNA, 7azs:MRNB, 6qnr:4K, 6qnr:4L, 4v6f:B1, 4v6f:C1
89 7ki3:C 29 29 0.2759 0.2759 0.2759 -47
90 7qv1:A 26 26 0.4483 0.5000 0.5000 -47 7qv3:A
91 7w0f:F 26 25 0.4828 0.5385 0.5600 -47
92 8sfj:B 29 29 0.2759 0.2759 0.2759 -47
93 8y7e:A 30 29 0.3793 0.3667 0.3793 -47
94 9f2r:R 15 15 0.4483 0.8667 0.8667 -47 9f37:R, 6qcs:R, 6t0n:R, 4wrt:R
95 2l3c:B 34 29 0.4828 0.4118 0.4828 -48
96 5do4:A 25 25 0.4483 0.5200 0.5200 -48
97 6bk8:e 34 29 0.4828 0.4118 0.4828 -48
98 6rr7:D 14 14 0.4483 0.9286 0.9286 -48
99 6sdw:B 34 29 0.4828 0.4118 0.4828 -48 6sdy:B
100 7xpl:G 25 24 0.4828 0.5600 0.5833 -48
101 8opp:D 25 25 0.4483 0.5200 0.5200 -48
102 8xc1:D 30 28 0.4828 0.4667 0.5000 -48 8xc1:F
103 2ez6:C 28 28 0.3448 0.3571 0.3571 -49 2ez6:D, 7r97:C, 7r97:D
104 2n82:A 23 23 0.3793 0.4783 0.4783 -49
105 6gbm:A 23 23 0.3793 0.4783 0.4783 -49
106 6muu:G 25 25 0.5172 0.6000 0.6000 -49
107 6nud:U 28 28 0.3448 0.3571 0.3571 -49
108 7rgu:B 28 28 0.3448 0.3571 0.3571 -49 7rgu:D, 7rgu:F, 7rgu:H
109 7uob:P 33 29 0.4483 0.3939 0.4483 -49 7uoe:P
110 8gzr:C 33 29 0.4483 0.3939 0.4483 -49
111 8id2:C 24 24 0.4483 0.5417 0.5417 -49 8id2:D, 7p0v:B
112 8sfi:B 28 28 0.3448 0.3571 0.3571 -49
113 1fje:A 22 22 0.3793 0.5000 0.5000 -50
114 3dkn:F 32 29 0.4138 0.3750 0.4138 -50
115 4m2z:C 27 27 0.3448 0.3704 0.3704 -50 4m2z:D
116 4x4p:H 28 27 0.4483 0.4643 0.4815 -50
117 5jea:R 27 27 0.3448 0.3704 0.3704 -50
118 5ns4:C 32 29 0.4138 0.3750 0.4138 -50
119 6kwr:B 28 27 0.4483 0.4643 0.4815 -50
120 6n7p:r 22 22 0.3793 0.5000 0.5000 -50
121 6xn5:R 32 29 0.4138 0.3750 0.4138 -50
122 7ade:R 32 29 0.4138 0.3750 0.4138 -50
123 7xg1:H 27 27 0.3448 0.3704 0.3704 -50
124 7ync:C 28 27 0.4483 0.4643 0.4815 -50
125 8e0f:C 32 29 0.4138 0.3750 0.4138 -50 8e4x:C
126 8ssw:D 23 23 0.4483 0.5652 0.5652 -50
127 8z8x:E 17 17 0.4138 0.7059 0.7059 -50 8z90:E
128 9aur:R 22 22 0.3793 0.5000 0.5000 -50 9aus:R, 9aus:C
129 2ese:B 23 23 0.5172 0.6522 0.6522 -51
130 3fte:D 22 22 0.4483 0.5909 0.5909 -51 3ftf:C, 3ftf:D
131 5gin:H 32 29 0.4828 0.4375 0.4828 -51 5gio:H, 3pla:H
132 5gin:N 31 29 0.3793 0.3548 0.3793 -51 5gio:N, 3pla:N
133 6evk:V 16 16 0.4138 0.7500 0.7500 -51 9f2r:V, 9f37:V, 6fhh:V, 6fhi:V, 5m3h:V, 4wsb:V
134 6hcj:v3 22 22 0.4483 0.5909 0.5909 -51 6hcq:v3
135 6xh1:D 27 27 0.4138 0.4444 0.4444 -51 6xh3:D
136 7n1p:mR 27 27 0.4138 0.4444 0.4444 -51
137 7vg3:D 32 29 0.4828 0.4375 0.4828 -51
138 8q7n:Z 31 29 0.3793 0.3548 0.3793 -51
139 1rpu:C 21 21 0.4483 0.6190 0.6190 -52 1rpu:D
140 2qux:C 25 25 0.3448 0.4000 0.4000 -52 2qux:F, 2qux:I, 2qux:L, 2qux:O, 2qux:R
141 3uzs:C 20 20 0.3793 0.5500 0.5500 -52
142 4jgn:E 20 20 0.3793 0.5500 0.5500 -52
143 4k50:F 31 28 0.4828 0.4516 0.5000 -52
144 4x4q:D 30 29 0.3448 0.3333 0.3448 -52
145 5gip:H 30 29 0.3448 0.3333 0.3448 -52
146 5gm6:N 25 25 0.3448 0.4000 0.4000 -52
147 5k0y:F 30 29 0.3448 0.3333 0.3448 -52
148 5ns4:D 30 29 0.3448 0.3333 0.3448 -52
149 5y58:X 30 29 0.3448 0.3333 0.3448 -52 5y58:Y, 5y58:Z
150 6by1:AX 30 29 0.3448 0.3333 0.3448 -52 6by1:BX
151 6du4:B 29 29 0.2414 0.2414 0.2414 -52
152 6evj:U 15 15 0.4138 0.8000 0.8000 -52 6evj:V
153 6wlh:B 29 29 0.2414 0.2414 0.2414 -52
154 7dmq:C 35 29 0.4828 0.4000 0.4828 -52
155 7elh:P 30 29 0.3448 0.3333 0.3448 -52
156 7vg3:C 30 29 0.3448 0.3333 0.3448 -52
157 7w0f:E 26 25 0.4483 0.5000 0.5200 -52
158 7y82:C 25 25 0.3448 0.4000 0.4000 -52
159 8d8n:C 35 29 0.4828 0.4000 0.4828 -52 8d9i:C
160 8dg7:F 26 25 0.4483 0.5000 0.5200 -52
161 8ehq:R 29 29 0.2414 0.2414 0.2414 -52 8eof:R, 8exy:R
162 8f5g:D 26 26 0.4138 0.4615 0.4615 -52 8f5g:E, 8f5g:F
163 8p4f:P 29 29 0.2414 0.2414 0.2414 -52
164 8peg:V 30 29 0.3448 0.3333 0.3448 -52
165 8yhe:N 30 29 0.3448 0.3333 0.3448 -52
166 4v6k:BD 24 24 0.3448 0.4167 0.4167 -53 4v6l:AD
167 4v84:AV 34 29 0.4483 0.3824 0.4483 -53 4v84:CV
168 5bs3:E 20 20 0.4138 0.6000 0.6000 -53
169 6qx9:I 25 25 0.4138 0.4800 0.4800 -53
170 6ty9:T 19 19 0.3793 0.5789 0.5789 -53
171 7v01:U 25 25 0.4138 0.4800 0.4800 -53
172 7yfq:B 25 23 0.4828 0.5600 0.6087 -53
173 8bek:V 14 14 0.4138 0.8571 0.8571 -53 6f5o:V, 5m3j:V, 5msg:V, 6qcs:V, 6qcv:V, 6qcw:V, 6qcx:V, 7r0e:V, 6szv:V, 6t0n:V, 6t0v:V, 4wrt:V, 4wsa:V, 7z43:VVV
174 8wkp:VTRF 25 25 0.4138 0.4800 0.4800 -53
175 2nuf:C 28 28 0.3103 0.3214 0.3214 -54 2nuf:D
176 2pjp:B 23 23 0.3448 0.4348 0.4348 -54
177 2x7n:A 28 28 0.3103 0.3214 0.3214 -54
178 3ov7:C 34 28 0.5517 0.4706 0.5714 -54 3ov7:D, 3ova:C, 3ovs:C, 3ovs:D
179 4a36:S 19 19 0.4483 0.6842 0.6842 -54
180 4v7c:AX 18 18 0.3793 0.6111 0.6111 -54
181 5m0i:E 28 28 0.3103 0.3214 0.3214 -54 5m0i:F, 5m0j:E, 5m0j:F
182 6fsz:2 23 23 0.3448 0.4348 0.4348 -54
183 6gtc:B 28 28 0.3103 0.3214 0.3214 -54 6gtd:B
184 7oqb:I 23 23 0.3448 0.4348 0.4348 -54
185 7ycx:c 23 23 0.3448 0.4348 0.4348 -54
186 8p4a:P 19 19 0.4483 0.6842 0.6842 -54
187 8z8x:D 18 18 0.3793 0.6111 0.6111 -54 8z90:D
188 2ann:B 23 23 0.4138 0.5217 0.5217 -55
189 2f8s:C 22 22 0.3448 0.4545 0.4545 -55
190 2ozb:C 33 29 0.4828 0.4242 0.4828 -55 2ozb:F
191 2qk9:B 18 18 0.4483 0.7222 0.7222 -55
192 3a6p:D 22 22 0.3448 0.4545 0.4545 -55 3a6p:I
193 3bo1:E 27 27 0.3103 0.3333 0.3333 -55
194 4a36:U 18 18 0.4483 0.7222 0.7222 -55
195 4m30:C 27 27 0.3103 0.3333 0.3333 -55 4m30:D
196 4v5z:BB 27 27 0.3103 0.3333 0.3333 -55
197 5lm7:G 27 27 0.3103 0.3333 0.3333 -55
198 5zwn:G 22 22 0.3448 0.4545 0.4545 -55
199 6ifn:N 32 29 0.3793 0.3438 0.3793 -55
200 6o5f:D 24 23 0.5172 0.6250 0.6522 -55
201 6ozo:C 23 23 0.4138 0.5217 0.5217 -55
202 6vff:C 32 29 0.3793 0.3438 0.3793 -55
203 7ajt:EA 22 22 0.3448 0.4545 0.4545 -55 7aju:EA
204 8d9f:C 33 29 0.4828 0.4242 0.4828 -55 8gu6:C, 7x7a:C, 7x8a:C
205 8jl0:C 22 22 0.3448 0.4545 0.4545 -55
206 8kah:E 32 29 0.3793 0.3438 0.3793 -55
207 8p4b:P 22 22 0.3448 0.4545 0.4545 -55
208 8sd0:B 32 29 0.3793 0.3438 0.3793 -55
209 1ry1:M 27 26 0.4138 0.4444 0.4615 -56
210 2zko:C 21 21 0.3448 0.4762 0.4762 -56 2zko:D
211 4k50:N 32 28 0.4828 0.4375 0.5000 -56
212 4x4n:D 31 29 0.3448 0.3226 0.3448 -56
213 4xej:AIRE 32 28 0.4828 0.4375 0.5000 -56 4xej:BIRE
214 5gip:G 31 29 0.3448 0.3226 0.3448 -56 5gip:Q
215 6bjg:D 21 21 0.3448 0.4762 0.4762 -56 6bjh:D, 6bjv:D
216 6cmn:D 27 27 0.3793 0.4074 0.4074 -56 6xh0:D, 6xh2:D
217 6iv6:G 26 26 0.3103 0.3462 0.3462 -56
218 6p7m:B 26 26 0.3103 0.3462 0.3462 -56 6p7n:B, 6p7n:F
219 6qcv:R 21 21 0.3448 0.4762 0.4762 -56 6qcw:R, 6qcx:R
220 6xn3:R 37 29 0.5862 0.4595 0.5862 -56 6xn7:R
221 7ozq:F 31 29 0.3448 0.3226 0.3448 -56
222 7uzw:G 31 29 0.3448 0.3226 0.3448 -56
223 8dvs:B 26 26 0.3103 0.3462 0.3462 -56
224 8ffi:C 21 21 0.3448 0.4762 0.4762 -56 8ffi:G, 8ffi:J, 8ffi:O, 8j9p:E, 8j9p:G, 8jay:E, 8jay:G, 8jay:K, 8jay:O, 8qlp:C, 8qlp:G, 8qlp:K, 8qlp:O, 8sp0:C, 8sp0:G, 8sp3:C, 8sp3:G, 8spo:G, 8spo:J, 8squ:C
225 1l1c:C 29 29 0.2069 0.2069 0.2069 -57
226 1urn:Q 21 21 0.4138 0.5714 0.5714 -57
227 2anr:B 25 25 0.3103 0.3600 0.3600 -57
228 2b63:R 31 29 0.4138 0.3871 0.4138 -57
229 4v6w:A9 30 29 0.3103 0.3000 0.3103 -57 6xu6:A9, 6xu7:A9, 6xu8:A9
230 5gip:R 29 29 0.2069 0.2069 0.2069 -57
231 5kpv:29 20 20 0.3448 0.5000 0.5000 -57 5kpw:29, 5kpx:29, 5uyk:V
232 5lmq:Y 21 21 0.4138 0.5714 0.5714 -57
233 5ng6:B 25 25 0.3103 0.3600 0.3600 -57 5ng6:D, 5ng6:F, 5ng6:H
234 5ux0:B 20 20 0.3448 0.5000 0.5000 -57
235 6bjg:C 21 21 0.4138 0.5714 0.5714 -57 6bjh:C, 6bjv:C
236 6ifl:J 35 29 0.4483 0.3714 0.4483 -57 6ifr:J
237 6kl9:G 25 25 0.3103 0.3600 0.3600 -57 6klb:E, 6klb:G
238 6o1o:N 30 29 0.3103 0.3000 0.3103 -57
239 7cxm:J 26 25 0.4138 0.4615 0.4800 -57 7cxn:J, 8gw1:J, 8gwk:J, 8gwm:J
240 7n0c:T 25 25 0.3103 0.3600 0.3600 -57
241 7qp7:7 21 21 0.4138 0.5714 0.5714 -57
242 7ss9:4 20 20 0.3448 0.5000 0.5000 -57 7ssw:4
243 8iew:B 36 29 0.5517 0.4444 0.5517 -57 8inb:B
244 8kgf:G 29 29 0.2069 0.2069 0.2069 -57
245 8rg0:7 31 27 0.4828 0.4516 0.5185 -57
246 8wq2:VTRF 26 26 0.3793 0.4231 0.4231 -57 8wq4:VTRF
247 9bct:7 29 29 0.2069 0.2069 0.2069 -57
248 9bcu:7 29 29 0.2069 0.2069 0.2069 -57
249 9cpo:P 30 29 0.3103 0.3000 0.3103 -57
250 1a9n:Q 24 24 0.3103 0.3750 0.3750 -58 1a9n:R
251 1p6v:D 24 24 0.3103 0.3750 0.3750 -58
252 3a6p:E 24 24 0.3103 0.3750 0.3750 -58 3a6p:J
253 3jcm:C 20 20 0.4138 0.6000 0.6000 -58
254 3ouy:C 35 28 0.5517 0.4571 0.5714 -58 3ouy:D, 3ovb:C, 3ovb:D
255 4x4o:B 34 29 0.4138 0.3529 0.4138 -58 4x4o:D, 4x4t:B
256 5gam:W 25 25 0.3793 0.4400 0.4400 -58
257 5jc7:X 24 24 0.3103 0.3750 0.3750 -58
258 5xlp:K 24 24 0.3103 0.3750 0.3750 -58
259 6mus:H 25 25 0.3793 0.4400 0.4400 -58
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796 4v4j:3 18 17 0.3448 0.5556 0.5882 -75
797 4v4z:A1 27 27 0.1724 0.1852 0.1852 -75
798 4v99:AD 17 17 0.2414 0.4118 0.4118 -75 4v99:AI, 4v99:AN, 4v99:AS, 4v99:AX, 4v99:Ac, 4v99:Ah, 4v99:Am, 4v99:Ar, 4v99:Aw, 4v99:A2, 4v99:A7, 4v99:BD, 4v99:BI, 4v99:BN, 4v99:BS, 4v99:BX, 4v99:Bc, 4v99:Bh, 4v99:Bm, 4v99:Br, 4v99:Bw, 4v99:B2, 4v99:B7, 4v99:CD, 4v99:CI, 4v99:CN, 4v99:CS, 4v99:CX, 4v99:Cc, 4v99:Ch, 4v99:Cm, 4v99:Cr, 4v99:Cw, 4v99:C2, 4v99:C7, 4v99:DD, 4v99:DI, 4v99:DN, 4v99:DS, 4v99:DX, 4v99:Dc, 4v99:Dh, 4v99:Dm, 4v99:Dr, 4v99:Dw, 4v99:D2, 4v99:D7, 4v99:ED, 4v99:EI, 4v99:EN, 4v99:ES, 4v99:EX, 4v99:Ec, 4v99:Eh, 4v99:Em, 4v99:Er, 4v99:Ew, 4v99:E2, 4v99:E7, 4v99:FD, 4v99:FI, 4v99:FN, 4v99:FS, 4v99:FX, 4v99:Fc, 4v99:Fh, 4v99:Fm, 4v99:Fr, 4v99:Fw, 4v99:F2, 4v99:F7, 4v99:GD, 4v99:GI, 4v99:GN, 4v99:GS, 4v99:GX, 4v99:Gc, 4v99:Gh, 4v99:Gm, 4v99:Gr, 4v99:Gw, 4v99:G2, 4v99:G7, 4v99:HD, 4v99:HI, 4v99:HN, 4v99:HS, 4v99:HX, 4v99:Hc, 4v99:Hh, 4v99:Hm, 4v99:Hr, 4v99:Hw, 4v99:H2, 4v99:H7, 4v99:ID, 4v99:II, 4v99:IN, 4v99:IS, 4v99:IX, 4v99:Ic, 4v99:Ih, 4v99:Im, 4v99:Ir, 4v99:Iw, 4v99:I2, 4v99:I7, 4v99:JD, 4v99:JI, 4v99:JN, 4v99:JS, 4v99:JX, 4v99:Jc, 4v99:Jh, 4v99:Jm, 4v99:Jr, 4v99:Jw, 4v99:J2, 4v99:J7
799 4w5q:B 18 18 0.3103 0.5000 0.5000 -75
800 4z4f:B 18 18 0.3103 0.5000 0.5000 -75
801 5epi:D 12 12 0.2759 0.6667 0.6667 -75 5epi:H, 5epi:L, 5epi:P, 5epi:T, 5epi:X, 8rn1:V
802 5xow:G 18 18 0.3103 0.5000 0.5000 -75
803 5xpg:G 17 17 0.2414 0.4118 0.4118 -75
804 6d12:C 38 29 0.4828 0.3684 0.4828 -75
805 6evj:R 13 13 0.3448 0.7692 0.7692 -75 6evj:S, 6evk:R, 6fhh:R, 6fhi:R, 5m3h:R, 4wsb:R
806 6mfr:E 22 22 0.2069 0.2727 0.2727 -75
807 6qnq:4K 17 17 0.2414 0.4118 0.4118 -75
808 6qx8:D 12 12 0.2759 0.6667 0.6667 -75 6qx8:H, 6qxe:D, 6qxe:H
809 7r81:w1 17 17 0.2414 0.4118 0.4118 -75 8ud3:G, 6y0g:A4
810 8as7:T 17 17 0.2414 0.4118 0.4118 -75 8r6u:T, 8r6w:T
811 8bek:R 17 17 0.2414 0.4118 0.4118 -75
812 8e6x:7 27 27 0.1724 0.1852 0.1852 -75 8e6z:7
813 8ej3:R 17 17 0.2414 0.4118 0.4118 -75
814 8fiz:AW 17 17 0.2414 0.4118 0.4118 -75
815 8hmz:3 37 29 0.3793 0.2973 0.3793 -75
816 8i0w:G 18 18 0.3103 0.5000 0.5000 -75
817 8p0b:V 12 12 0.2759 0.6667 0.6667 -75 8p0u:V, 8z97:D, 8z9h:D, 8z9r:D
818 8qg0:Q 17 17 0.2414 0.4118 0.4118 -75
819 8s9t:F 37 29 0.3793 0.2973 0.3793 -75 8s9u:F, 8s9v:F, 8s9x:F
820 8ud3:H 17 17 0.2414 0.4118 0.4118 -75
821 8ud5:H 27 27 0.1724 0.1852 0.1852 -75
822 2mfc:B 22 22 0.2759 0.3636 0.3636 -76 2mfc:D
823 2mfg:B 21 21 0.2069 0.2857 0.2857 -76 2mfg:D
824 2xd0:G 36 29 0.3448 0.2778 0.3448 -76 2xd0:H, 2xd0:I, 2xd0:U, 2xd0:V, 2xd0:W, 2xdb:G, 2xdd:F, 2xdd:G, 2xdd:H
825 3ol8:B 17 17 0.3103 0.5294 0.5294 -76 3ol8:F, 3ol8:J, 3ol8:N
826 4k4s:B 17 17 0.3103 0.5294 0.5294 -76 4k4s:F
827 4tua:XY 16 16 0.2414 0.4375 0.4375 -76
828 4v8j:AY 17 17 0.3103 0.5294 0.5294 -76 4v8j:CY
829 5xon:P 16 16 0.2414 0.4375 0.4375 -76
830 6dcl:C 11 11 0.2759 0.7273 0.7273 -76 6dcl:D
831 6j4x:P 16 16 0.2414 0.4375 0.4375 -76 6j4y:P, 6j51:P, 8jh2:P
832 6kut:R 12 12 0.3448 0.8333 0.8333 -76 6kuu:R
833 6ozl:D 16 16 0.2414 0.4375 0.4375 -76
834 6sjd:D 17 17 0.3103 0.5294 0.5294 -76
835 6sqn:X 16 16 0.2414 0.4375 0.4375 -76 6sqq:XXX, 6sqq:YYY, 6sqq:ZZZ
836 6tqa:E 21 21 0.2069 0.2857 0.2857 -76 6tqa:F, 6tqa:G, 6tqa:H
837 6uso:F 16 16 0.2069 0.3750 0.3750 -76 6usp:F, 6usq:F, 6usr:F
838 6vys:7 26 26 0.1724 0.1923 0.1923 -76
839 6xii:7 31 29 0.2069 0.1935 0.2069 -76
840 6ywy:ee 11 11 0.2759 0.7273 0.7273 -76
841 7dfg:T 16 16 0.2414 0.4375 0.4375 -76
842 7mqa:L0 16 16 0.2414 0.4375 0.4375 -76
843 7orj:H 17 17 0.3103 0.5294 0.5294 -76 7ork:H, 7orl:H, 7orn:H
844 7orm:T 11 11 0.2759 0.7273 0.7273 -76 7oro:T, 6z8k:H
845 7tj2:H 31 29 0.2069 0.1935 0.2069 -76
846 7unc:P 16 16 0.2414 0.4375 0.4375 -76
847 7wbv:P 16 16 0.2414 0.4375 0.4375 -76
848 7yed:T 36 29 0.3448 0.2778 0.3448 -76
849 7zag:5 22 22 0.2759 0.3636 0.3636 -76 7zah:5, 7zai:5
850 8as7:P 17 17 0.3103 0.5294 0.5294 -76 8asb:P
851 8asd:T 17 17 0.3103 0.5294 0.5294 -76
852 8ci5:C 11 11 0.2759 0.7273 0.7273 -76
853 8fni:g 16 16 0.2414 0.4375 0.4375 -76 6olg:Bx, 6olz:Bx
854 8fni:m 21 21 0.2069 0.2857 0.2857 -76
855 8hke:D 37 28 0.4828 0.3784 0.5000 -76
856 8hra:K 17 17 0.3103 0.5294 0.5294 -76 8hra:L, 8hra:M, 8hrb:V, 8hrb:Z, 8hrb:X, 8hrb:W, 8hrb:Y, 8hrb:a
857 8sfn:B 36 29 0.3448 0.2778 0.3448 -76
858 1qfq:A 15 15 0.2414 0.4667 0.4667 -77
859 1u1y:S 16 16 0.3103 0.5625 0.5625 -77
860 2i91:F 15 15 0.2414 0.4667 0.4667 -77
861 2jpp:C 20 20 0.2069 0.3000 0.3000 -77 2jpp:D
862 2o5i:H 16 16 0.3103 0.5625 0.5625 -77 2o5i:Y, 2o5j:H, 2o5j:Y, 2ppb:H, 2ppb:Y
863 3hjy:C 21 21 0.2759 0.3810 0.3810 -77 2rfk:D
864 4b3p:R 21 19 0.3448 0.4762 0.5263 -77
865 4hkq:E 16 16 0.3103 0.5625 0.5625 -77
866 4l8h:R 20 20 0.2069 0.3000 0.3000 -77
867 4pmi:A 40 29 0.4483 0.3250 0.4483 -77
868 4puo:T 20 20 0.2069 0.3000 0.3000 -77
869 4v9c:AX 16 15 0.3448 0.6250 0.6667 -77 4woi:DV
870 4w29:AV 36 29 0.4138 0.3333 0.4138 -77 4w29:CV
871 4ypb:QX 20 20 0.2069 0.3000 0.3000 -77 4ypb:XX, 4zsn:QX, 4zsn:XX
872 5f5h:C 21 21 0.2759 0.3810 0.3810 -77 5f5h:D
873 5gin:G 35 29 0.3103 0.2571 0.3103 -77 5gio:G, 3pla:G
874 5w0o:C 15 15 0.2414 0.4667 0.4667 -77 5w0o:D
875 5xus:B 40 29 0.4483 0.3250 0.4483 -77 5xut:B, 5xuu:B, 5xuz:B, 5xuz:F
876 6bhj:E 35 29 0.3103 0.2571 0.3103 -77 6bhj:F
877 6du5:B 25 25 0.1724 0.2000 0.2000 -77
878 6h9i:C 25 25 0.1724 0.2000 0.2000 -77 6h9i:E
879 6rr7:E 11 11 0.3448 0.9091 0.9091 -77
880 6snt:5 21 21 0.2759 0.3810 0.3810 -77
881 6xdq:7 35 29 0.3103 0.2571 0.3103 -77
882 6zym:Y 41 29 0.5517 0.3902 0.5517 -77
883 7k51:4 16 16 0.3103 0.5625 0.5625 -77 7k52:4
884 7ki3:F 21 21 0.2759 0.3810 0.3810 -77
885 7vpx:I 15 15 0.2414 0.4667 0.4667 -77
886 7xd9:K 16 16 0.3103 0.5625 0.5625 -77
887 8d4a:B 41 29 0.5517 0.3902 0.5517 -77 8d4b:B
888 8e28:C 15 15 0.2414 0.4667 0.4667 -77
889 8e2a:B 15 15 0.2414 0.4667 0.4667 -77
890 8ovj:S4 20 20 0.2069 0.3000 0.3000 -77
891 8psn:S 15 15 0.2414 0.4667 0.4667 -77 8pso:S, 8psu:S, 8pt6:S
892 8r3v:W1 36 29 0.4138 0.3333 0.4138 -77 8rcl:W1, 8rcm:W1
893 8r6u:P 16 16 0.3103 0.5625 0.5625 -77 8r6w:P, 8r6y:P
894 8sq9:T 35 29 0.3103 0.2571 0.3103 -77 7uo9:T
895 8z9q:D 10 10 0.2759 0.8000 0.8000 -77 8z9r:G, 8z9r:K
896 1aq4:S 14 14 0.2414 0.5000 0.5000 -78
897 2b2g:S 15 15 0.3103 0.6000 0.6000 -78 2bny:R, 2iz9:R, 2iz9:S
898 2bx2:R 14 14 0.2414 0.5000 0.5000 -78
899 2c51:R 15 15 0.3103 0.6000 0.6000 -78
900 2mkn:B 19 19 0.2069 0.3158 0.3158 -78
901 2y8y:B 19 19 0.2069 0.3158 0.3158 -78 2y9h:B, 2y9h:D, 2y9h:F, 2y9h:H, 2y9h:J, 2y9h:L
902 3hjf:Y 15 15 0.3103 0.6000 0.6000 -78
903 4a2x:M 14 14 0.2414 0.5000 0.5000 -78 4a2x:O
904 4h5p:E 14 14 0.2414 0.5000 0.5000 -78 4h5p:F, 4pmw:C, 4pmw:D, 7qvp:A4, 6zsa:r1, 6zse:r1, 6zsg:r1
905 4ill:R 19 19 0.2069 0.3158 0.3158 -78
906 4v5z:AH 41 29 0.6207 0.4390 0.6207 -78
907 4v5z:BM 19 19 0.2069 0.3158 0.3158 -78
908 4zlr:C 14 14 0.2414 0.5000 0.5000 -78
909 5ib7:4L 19 19 0.2069 0.3158 0.3158 -78 5ib8:4L
910 6htu:F 19 19 0.2069 0.3158 0.3158 -78
911 6mdz:D 14 14 0.2414 0.5000 0.5000 -78 6mfr:D
912 6oj6:T 14 14 0.2414 0.5000 0.5000 -78
913 6oxa:QX 20 20 0.2759 0.4000 0.4000 -78 6oxa:XX
914 6z6b:CCC 16 16 0.3793 0.6875 0.6875 -78 6z6b:HHH
915 6ztl:AV 34 29 0.2759 0.2353 0.2759 -78
916 7a5p:5 40 29 0.5172 0.3750 0.5172 -78
917 7abz:8 15 15 0.3103 0.6000 0.6000 -78 7ac7:8
918 7am2:R2 34 29 0.2759 0.2353 0.2759 -78 8qcf:N
919 7dok:P 20 20 0.2759 0.4000 0.4000 -78 7ed5:I
920 7mei:r 16 16 0.3793 0.6875 0.6875 -78 7mka:r
921 7ofz:C 19 19 0.2069 0.3158 0.3158 -78
922 7qi4:Az 34 29 0.2759 0.2353 0.2759 -78 7qi5:Az
923 7zol:C 39 29 0.4138 0.3077 0.4138 -78 7zoq:C
924 7zvn:D 15 15 0.3103 0.6000 0.6000 -78
925 8a98:S4 19 19 0.2069 0.3158 0.3158 -78
926 8dga:E 19 19 0.2069 0.3158 0.3158 -78
927 8h0i:X 19 19 0.2069 0.3158 0.3158 -78 8h0i:Y
928 8pkl:V 24 24 0.1724 0.2083 0.2083 -78
929 8sfl:B 34 29 0.2759 0.2353 0.2759 -78
930 8swb:B 20 20 0.2759 0.4000 0.4000 -78 8swc:B, 6vrd:B
931 8swb:D 20 20 0.2759 0.4000 0.4000 -78 6vrd:C
932 8swc:C 20 20 0.2414 0.3500 0.3500 -78
933 8z9e:M 39 29 0.4138 0.3077 0.4138 -78
934 2dr7:B 33 29 0.2414 0.2121 0.2414 -79 2dr8:B
935 2ix1:B 13 13 0.2414 0.5385 0.5385 -79
936 2zh1:B 33 29 0.2414 0.2121 0.2414 -79
937 2zh5:B 34 29 0.3448 0.2941 0.3448 -79 2zh6:B
938 2zh7:B 33 29 0.2414 0.2121 0.2414 -79
939 2zh8:B 34 28 0.3793 0.3235 0.3929 -79
940 3gtk:R 14 14 0.3103 0.6429 0.6429 -79
941 3nmu:D 34 29 0.3448 0.2941 0.3448 -79 3nmu:E
942 3qrq:B 19 19 0.2759 0.4211 0.4211 -79
943 4c8y:C 14 14 0.3103 0.6429 0.6429 -79
944 4h8k:C 14 14 0.3103 0.6429 0.6429 -79 2qkk:C, 2qkk:G, 2qkk:K, 2qkk:O, 2qkk:T
945 4qik:C 18 18 0.2069 0.3333 0.3333 -79
946 4qik:D 18 18 0.2069 0.3333 0.3333 -79
947 4v6g:A1 23 23 0.1724 0.2174 0.2174 -79 4v6g:C1
948 4v83:AV 35 29 0.4483 0.3714 0.4483 -79 4v83:CV
949 4w4g:QX 18 18 0.2069 0.3333 0.3333 -79 4w4g:XX
950 5aj3:X 13 13 0.2414 0.5385 0.5385 -79 5aj4:AX, 2f55:D, 5i8q:F, 7uml:R
951 5i4a:D 13 13 0.2414 0.5385 0.5385 -79
952 6d8a:C 18 18 0.2069 0.3333 0.3333 -79 6d8a:H, 6d8f:C, 6d8f:H, 6d8p:E, 6d8p:C, 6d92:C, 6d92:H, 6d95:B, 6d95:H, 6d9k:C, 6d9k:H
953 6g90:I 38 29 0.3793 0.2895 0.3793 -79
954 6hct:A 19 19 0.2759 0.4211 0.4211 -79 6hct:B
955 6jnx:R 18 18 0.2069 0.3333 0.3333 -79
956 6nuo:QX 19 19 0.2759 0.4211 0.4211 -79 6o3m:XX
957 6oxi:QX 18 18 0.2069 0.3333 0.3333 -79 6oxi:XX
958 6waz:C 23 23 0.1724 0.2174 0.2174 -79
959 6x5m:R 39 29 0.4828 0.3590 0.4828 -79 6x5m:r, 6x5n:R, 6x5n:r
960 7d5t:5A 43 29 0.5172 0.3488 0.5172 -79
961 7niq:G 14 14 0.3103 0.6429 0.6429 -79
962 7nwg:v3 18 18 0.2069 0.3333 0.3333 -79
963 7ofw:C 18 18 0.2069 0.3333 0.3333 -79
964 7orm:H 14 14 0.3103 0.6429 0.6429 -79 7oro:H
965 7q0p:10 14 14 0.3103 0.6429 0.6429 -79 7q0r:10
966 7qi6:Az 33 29 0.2414 0.2121 0.2414 -79
967 7sba:Z 43 29 0.5172 0.3488 0.5172 -79 7sbb:Z
968 7wwv:M 39 29 0.4828 0.3590 0.4828 -79
969 7y81:C 19 19 0.2759 0.4211 0.4211 -79
970 7y85:C 23 23 0.1724 0.2174 0.2174 -79
971 8ccs:Dd 13 13 0.2414 0.5385 0.5385 -79 8cf5:Dd, 8cku:Dd
972 8d9g:D 23 23 0.1724 0.2174 0.2174 -79
973 8d9i:D 19 19 0.2759 0.4211 0.4211 -79
974 8h0v:P 14 14 0.3103 0.6429 0.6429 -79
975 8j62:X 19 18 0.3103 0.4737 0.5000 -79 8j62:Y
976 8oeu:P 13 13 0.2414 0.5385 0.5385 -79 8oev:P, 8oew:P, 8of0:P
977 8pbl:R 14 14 0.3103 0.6429 0.6429 -79
978 8qpb:z 13 13 0.2414 0.5385 0.5385 -79 8r0b:z
979 8waz:Z 13 13 0.2414 0.5385 0.5385 -79
980 8yhd:N 35 29 0.4483 0.3714 0.4483 -79
981 1b7f:P 12 12 0.2414 0.5833 0.5833 -80 1b7f:Q
982 1zdh:R 13 13 0.3103 0.6923 0.6923 -80 1zdh:S
983 2iz8:S 13 13 0.3103 0.6923 0.6923 -80
984 2qkk:X 13 13 0.3103 0.6923 0.6923 -80
985 3avx:T 13 13 0.3103 0.6923 0.6923 -80
986 3ola:J 18 18 0.2759 0.4444 0.4444 -80 3ola:N
987 4k4v:B 13 13 0.3103 0.6923 0.6923 -80 4k4v:F
988 4kxt:B 12 12 0.2414 0.5833 0.5833 -80 6oon:B
989 4qoz:D 18 18 0.2759 0.4444 0.4444 -80
990 4v4r:AX 17 17 0.2069 0.3529 0.3529 -80
991 4x4n:G 18 18 0.2759 0.4444 0.4444 -80 4x4t:G
992 5m5x:R 13 13 0.3103 0.6923 0.6923 -80
993 5msf:R 18 18 0.2759 0.4444 0.4444 -80
994 5y6z:F 18 18 0.2759 0.4444 0.4444 -80
995 6vyq:7 32 29 0.2069 0.1875 0.2069 -80 6vzj:7
996 6xij:7 22 22 0.1724 0.2273 0.2273 -80
997 7a9x:B 13 13 0.3103 0.6923 0.6923 -80
998 7d8o:B 37 29 0.3448 0.2703 0.3448 -80 7d8o:D, 7d8o:F, 7d8o:H, 7d8o:J, 7d8o:L
999 7m3t:bb 12 12 0.2414 0.5833 0.5833 -80 7syp:7
1000 7n2c:mR 12 12 0.2414 0.5833 0.5833 -80

[Back]
Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417